data_3K18
#
_entry.id 3K18
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3K18 pdb_00003k18 10.2210/pdb3k18/pdb
NDB NA0216 ? ?
RCSB RCSB055417 ? ?
WWPDB D_1000055417 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2010-10-06
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2018-01-24
4 'Structure model' 1 3 2024-02-21
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Database references'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' citation_author
2 4 'Structure model' chem_comp_atom
3 4 'Structure model' chem_comp_bond
4 4 'Structure model' database_2
5 4 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_citation_author.name'
2 4 'Structure model' '_database_2.pdbx_DOI'
3 4 'Structure model' '_database_2.pdbx_database_accession'
4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3K18
_pdbx_database_status.recvd_initial_deposition_date 2009-09-25
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 3FA1
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Sheng, J.' 1
'Hassan, A.E.A.' 2
'Zhang, W.' 3
'Huang, Z.' 4
#
_citation.id primary
_citation.title 'Synthesis and Structure Study of Oligonucleotides Derivatized with Tellurium Functionality'
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Sheng, J.' 1 ?
primary 'Hassan, A.E.A.' 2 ?
primary 'Zhang, W.' 3 ?
primary 'Huang, Z.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3'" 2619.151 1 ? ? ? '5-Te modification'
2 water nat water 18.015 28 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(UMS)(DG)(TTI)(DA)(DC)(DA)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GUGUACAC
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 UMS n
1 3 DG n
1 4 TTI n
1 5 DA n
1 6 DC n
1 7 DA n
1 8 DC n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ?
'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
TTI 'DNA linking' n
;2'-deoxy-5-telluroxouridine 5'-(dihydrogen phosphate)
;
"5-Tellurium-deoxyuridine-5'-phosphate" 'C9 H13 N2 O8 P Te' 435.782
UMS 'DNA linking' n "2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE" ?
'C10 H15 N2 O8 P Se' 401.168
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG DG A . n
A 1 2 UMS 2 2 2 UMS UMS A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 TTI 4 4 4 TTI TTI A . n
A 1 5 DA 5 5 5 DA DA A . n
A 1 6 DC 6 6 6 DC DC A . n
A 1 7 DA 7 7 7 DA DA A . n
A 1 8 DC 8 8 8 DC DC A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 11 11 HOH HOH A .
B 2 HOH 2 12 12 HOH HOH A .
B 2 HOH 3 13 13 HOH HOH A .
B 2 HOH 4 14 14 HOH HOH A .
B 2 HOH 5 15 15 HOH HOH A .
B 2 HOH 6 16 16 HOH HOH A .
B 2 HOH 7 17 17 HOH HOH A .
B 2 HOH 8 18 18 HOH HOH A .
B 2 HOH 9 19 19 HOH HOH A .
B 2 HOH 10 20 20 HOH HOH A .
B 2 HOH 11 21 21 HOH HOH A .
B 2 HOH 12 22 22 HOH HOH A .
B 2 HOH 13 23 23 HOH HOH A .
B 2 HOH 14 24 24 HOH HOH A .
B 2 HOH 15 25 25 HOH HOH A .
B 2 HOH 16 26 26 HOH HOH A .
B 2 HOH 17 27 27 HOH HOH A .
B 2 HOH 18 28 28 HOH HOH A .
B 2 HOH 19 29 29 HOH HOH A .
B 2 HOH 20 30 30 HOH HOH A .
B 2 HOH 21 31 31 HOH HOH A .
B 2 HOH 22 32 32 HOH HOH A .
B 2 HOH 23 33 33 HOH HOH A .
B 2 HOH 24 34 34 HOH HOH A .
B 2 HOH 25 35 35 HOH HOH A .
B 2 HOH 26 36 36 HOH HOH A .
B 2 HOH 27 37 37 HOH HOH A .
B 2 HOH 28 38 38 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
CBASS 'data collection' . ? 1
SHELXS phasing . ? 2
REFMAC refinement 5.2.0019 ? 3
d*TREK 'data reduction' . ? 4
d*TREK 'data scaling' . ? 5
#
_cell.entry_id 3K18
_cell.length_a 42.695
_cell.length_b 42.695
_cell.length_c 24.213
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3K18
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3K18
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.11
_exptl_crystal.density_percent_sol 41.61
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6
_exptl_crystal_grow.pdbx_details
'MPD,sodium cacodylate,spermine tetra-HCl, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 99
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 210'
_diffrn_detector.pdbx_collection_date 2008-04-12
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111)'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9795
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'NSLS BEAMLINE X12C'
_diffrn_source.pdbx_synchrotron_site NSLS
_diffrn_source.pdbx_synchrotron_beamline X12C
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.9795
#
_reflns.entry_id 3K18
_reflns.observed_criterion_sigma_I 5.0
_reflns.observed_criterion_sigma_F 50
_reflns.d_resolution_low 18.89
_reflns.d_resolution_high 1.5
_reflns.number_obs 3659
_reflns.number_all 3878
_reflns.percent_possible_obs 94.4
_reflns.pdbx_Rmerge_I_obs 0.075
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 15
_reflns.B_iso_Wilson_estimate 19.6
_reflns.pdbx_redundancy 8.63
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.50
_reflns_shell.d_res_low 1.55
_reflns_shell.percent_possible_all 74.9
_reflns_shell.Rmerge_I_obs 0.427
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 2.4
_reflns_shell.pdbx_redundancy 5.3
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 277
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3K18
_refine.ls_number_reflns_obs 3483
_refine.ls_number_reflns_all 3706
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 18.89
_refine.ls_d_res_high 1.50
_refine.ls_percent_reflns_obs 93.97
_refine.ls_R_factor_obs 0.20239
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.20142
_refine.ls_R_factor_R_free 0.22323
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.5
_refine.ls_number_reflns_R_free 165
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.961
_refine.correlation_coeff_Fo_to_Fc_free 0.948
_refine.B_iso_mean 19.275
_refine.aniso_B[1][1] 0.07
_refine.aniso_B[2][2] 0.07
_refine.aniso_B[3][3] -0.14
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct SIRAS
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.083
_refine.pdbx_overall_ESU_R_Free 0.081
_refine.overall_SU_ML 0.053
_refine.overall_SU_B 2.967
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3K18
_refine_analyze.Luzzati_coordinate_error_obs 0.083
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free 0.081
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 162
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 28
_refine_hist.number_atoms_total 190
_refine_hist.d_res_high 1.50
_refine_hist.d_res_low 18.89
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.011 0.021 ? 181 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1.841 3.000 ? 277 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.078 0.200 ? 32 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.011 0.020 ? 83 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.144 0.200 ? 52 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.270 0.200 ? 105 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.166 0.200 ? 11 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.173 0.200 ? 22 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.144 0.200 ? 13 'X-RAY DIFFRACTION' ?
r_scbond_it 1.259 3.000 ? 262 'X-RAY DIFFRACTION' ?
r_scangle_it 1.662 4.500 ? 277 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.500
_refine_ls_shell.d_res_low 1.539
_refine_ls_shell.number_reflns_R_work 201
_refine_ls_shell.R_factor_R_work 0.292
_refine_ls_shell.percent_reflns_obs 72.79
_refine_ls_shell.R_factor_R_free 0.381
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 5
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 3K18
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3K18
_struct.title 'Tellurium modified DNA-8mer'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3K18
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA Tellurium, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3K18
_struct_ref.pdbx_db_accession 3K18
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code GUGUACAC
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3K18
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 8
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 3K18
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 8
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 8
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1930 ?
1 MORE 7 ?
1 'SSA (A^2)' 2920 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 24.2130000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A UMS 2 P ? ? A DG 1 A UMS 2 1_555 ? ? ? ? ? ? ? 1.604 ? ?
covale2 covale both ? A UMS 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A UMS 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.607 ? ?
covale3 covale both ? A DG 3 "O3'" ? ? ? 1_555 A TTI 4 P ? ? A DG 3 A TTI 4 1_555 ? ? ? ? ? ? ? 1.600 ? ?
covale4 covale both ? A TTI 4 "O3'" ? ? ? 1_555 A DA 5 P ? ? A TTI 4 A DA 5 1_555 ? ? ? ? ? ? ? 1.608 ? ?
metalc1 metalc ? ? A TTI 4 TE5 ? ? ? 1_555 B HOH . O ? ? A TTI 4 A HOH 38 1_555 ? ? ? ? ? ? ? 2.374 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A UMS 2 N3 ? ? ? 1_555 A DA 7 N1 ? ? A UMS 2 A DA 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A UMS 2 O4 ? ? ? 1_555 A DA 7 N6 ? ? A UMS 2 A DA 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 3 A DC 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 3 A DC 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 3 A DC 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A TTI 4 N3 ? ? ? 1_555 A DA 5 N1 ? ? A TTI 4 A DA 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A TTI 4 O4 ? ? ? 1_555 A DA 5 N6 ? ? A TTI 4 A DA 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A TTI 4 N3 ? ? A DA 5 A TTI 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A TTI 4 O4 ? ? A DA 5 A TTI 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 6 A DG 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 6 A DG 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 6 A DG 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A UMS 2 N3 ? ? A DA 7 A UMS 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A UMS 2 O4 ? ? A DA 7 A UMS 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
_pdbx_struct_conn_angle.id 1
_pdbx_struct_conn_angle.ptnr1_label_atom_id O
_pdbx_struct_conn_angle.ptnr1_label_alt_id ?
_pdbx_struct_conn_angle.ptnr1_label_asym_id B
_pdbx_struct_conn_angle.ptnr1_label_comp_id HOH
_pdbx_struct_conn_angle.ptnr1_label_seq_id .
_pdbx_struct_conn_angle.ptnr1_auth_atom_id ?
_pdbx_struct_conn_angle.ptnr1_auth_asym_id A
_pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 38
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code ?
_pdbx_struct_conn_angle.ptnr1_symmetry 1_555
_pdbx_struct_conn_angle.ptnr2_label_atom_id TE5
_pdbx_struct_conn_angle.ptnr2_label_alt_id ?
_pdbx_struct_conn_angle.ptnr2_label_asym_id A
_pdbx_struct_conn_angle.ptnr2_label_comp_id TTI
_pdbx_struct_conn_angle.ptnr2_label_seq_id 4
_pdbx_struct_conn_angle.ptnr2_auth_atom_id ?
_pdbx_struct_conn_angle.ptnr2_auth_asym_id A
_pdbx_struct_conn_angle.ptnr2_auth_comp_id TTI
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 4
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code ?
_pdbx_struct_conn_angle.ptnr2_symmetry 1_555
_pdbx_struct_conn_angle.ptnr3_label_atom_id C5
_pdbx_struct_conn_angle.ptnr3_label_alt_id ?
_pdbx_struct_conn_angle.ptnr3_label_asym_id A
_pdbx_struct_conn_angle.ptnr3_label_comp_id TTI
_pdbx_struct_conn_angle.ptnr3_label_seq_id 4
_pdbx_struct_conn_angle.ptnr3_auth_atom_id ?
_pdbx_struct_conn_angle.ptnr3_auth_asym_id A
_pdbx_struct_conn_angle.ptnr3_auth_comp_id TTI
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 4
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code ?
_pdbx_struct_conn_angle.ptnr3_symmetry 1_555
_pdbx_struct_conn_angle.value 173.4
_pdbx_struct_conn_angle.value_esd ?
#
_pdbx_validate_rmsd_angle.id 1
_pdbx_validate_rmsd_angle.PDB_model_num 1
_pdbx_validate_rmsd_angle.auth_atom_id_1 "C4'"
_pdbx_validate_rmsd_angle.auth_asym_id_1 A
_pdbx_validate_rmsd_angle.auth_comp_id_1 DG
_pdbx_validate_rmsd_angle.auth_seq_id_1 3
_pdbx_validate_rmsd_angle.PDB_ins_code_1 ?
_pdbx_validate_rmsd_angle.label_alt_id_1 ?
_pdbx_validate_rmsd_angle.auth_atom_id_2 "C3'"
_pdbx_validate_rmsd_angle.auth_asym_id_2 A
_pdbx_validate_rmsd_angle.auth_comp_id_2 DG
_pdbx_validate_rmsd_angle.auth_seq_id_2 3
_pdbx_validate_rmsd_angle.PDB_ins_code_2 ?
_pdbx_validate_rmsd_angle.label_alt_id_2 ?
_pdbx_validate_rmsd_angle.auth_atom_id_3 "C2'"
_pdbx_validate_rmsd_angle.auth_asym_id_3 A
_pdbx_validate_rmsd_angle.auth_comp_id_3 DG
_pdbx_validate_rmsd_angle.auth_seq_id_3 3
_pdbx_validate_rmsd_angle.PDB_ins_code_3 ?
_pdbx_validate_rmsd_angle.label_alt_id_3 ?
_pdbx_validate_rmsd_angle.angle_value 97.69
_pdbx_validate_rmsd_angle.angle_target_value 102.20
_pdbx_validate_rmsd_angle.angle_deviation -4.51
_pdbx_validate_rmsd_angle.angle_standard_deviation 0.70
_pdbx_validate_rmsd_angle.linker_flag N
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A UMS 2 A UMS 2 ? DU ?
2 A TTI 4 A TTI 4 ? DU ?
#
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls.id 1
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 33.5819
_pdbx_refine_tls.origin_y 32.6170
_pdbx_refine_tls.origin_z 9.7513
_pdbx_refine_tls.T[1][1] -0.0012
_pdbx_refine_tls.T[2][2] 0.0203
_pdbx_refine_tls.T[3][3] 0.0417
_pdbx_refine_tls.T[1][2] 0.0057
_pdbx_refine_tls.T[1][3] -0.0151
_pdbx_refine_tls.T[2][3] 0.0180
_pdbx_refine_tls.L[1][1] 0.5401
_pdbx_refine_tls.L[2][2] 0.1088
_pdbx_refine_tls.L[3][3] 0.5416
_pdbx_refine_tls.L[1][2] -0.0107
_pdbx_refine_tls.L[1][3] 0.0070
_pdbx_refine_tls.L[2][3] 0.2424
_pdbx_refine_tls.S[1][1] 0.0580
_pdbx_refine_tls.S[1][2] 0.2698
_pdbx_refine_tls.S[1][3] 0.0038
_pdbx_refine_tls.S[2][1] 0.0296
_pdbx_refine_tls.S[2][2] -0.0211
_pdbx_refine_tls.S[2][3] 0.0193
_pdbx_refine_tls.S[3][1] -0.0299
_pdbx_refine_tls.S[3][2] 0.0566
_pdbx_refine_tls.S[3][3] -0.0369
#
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_auth_asym_id A
_pdbx_refine_tls_group.beg_auth_seq_id 1
_pdbx_refine_tls_group.beg_label_asym_id ?
_pdbx_refine_tls_group.beg_label_seq_id ?
_pdbx_refine_tls_group.end_auth_asym_id A
_pdbx_refine_tls_group.end_auth_seq_id 8
_pdbx_refine_tls_group.end_label_asym_id ?
_pdbx_refine_tls_group.end_label_seq_id ?
_pdbx_refine_tls_group.selection ?
_pdbx_refine_tls_group.selection_details ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
HOH O O N N 108
HOH H1 H N N 109
HOH H2 H N N 110
TTI O3P O N N 111
TTI N1 N N N 112
TTI C2 C N N 113
TTI O2 O N N 114
TTI N3 N N N 115
TTI C4 C N N 116
TTI O4 O N N 117
TTI C5 C N N 118
TTI C6 C N N 119
TTI "C1'" C N R 120
TTI "C2'" C N N 121
TTI "C3'" C N S 122
TTI "O3'" O N N 123
TTI "C4'" C N R 124
TTI "O4'" O N N 125
TTI "C5'" C N N 126
TTI "O5'" O N N 127
TTI P P N N 128
TTI O1P O N N 129
TTI O2P O N N 130
TTI TE5 TE N N 131
TTI HO3P H N N 132
TTI HN3 H N N 133
TTI H6 H N N 134
TTI H6A H N N 135
TTI "H1'" H N N 136
TTI "H2'" H N N 137
TTI "H2'A" H N N 138
TTI "H3'" H N N 139
TTI "HO3'" H N N 140
TTI "H4'" H N N 141
TTI "H5'" H N N 142
TTI "H5'A" H N N 143
TTI HO2P H N N 144
UMS OP3 O N N 145
UMS P P N N 146
UMS OP1 O N N 147
UMS OP2 O N N 148
UMS "O5'" O N N 149
UMS "C5'" C N N 150
UMS "C4'" C N R 151
UMS "O4'" O N N 152
UMS "C3'" C N R 153
UMS "O3'" O N N 154
UMS "C2'" C N R 155
UMS "SE2'" SE N N 156
UMS "C1'" C N R 157
UMS "CA'" C N N 158
UMS N1 N N N 159
UMS C2 C N N 160
UMS O2 O N N 161
UMS N3 N N N 162
UMS C4 C N N 163
UMS O4 O N N 164
UMS C5 C N N 165
UMS C6 C N N 166
UMS HOP3 H N N 167
UMS HOP2 H N N 168
UMS "H5'" H N N 169
UMS "H5'2" H N N 170
UMS "H4'" H N N 171
UMS "H3'" H N N 172
UMS "HO3'" H N N 173
UMS "H2'" H N N 174
UMS "H1'" H N N 175
UMS "HA'" H N N 176
UMS "HA'2" H N N 177
UMS "HA'3" H N N 178
UMS H3 H N N 179
UMS H5 H N N 180
UMS H6 H N N 181
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
HOH O H1 sing N N 113
HOH O H2 sing N N 114
TTI O3P P sing N N 115
TTI O3P HO3P sing N N 116
TTI C2 N1 sing N N 117
TTI N1 C6 sing N N 118
TTI N1 "C1'" sing N N 119
TTI N3 C2 sing N N 120
TTI O2 C2 doub N N 121
TTI N3 C4 sing N N 122
TTI N3 HN3 sing N N 123
TTI O4 C4 doub N N 124
TTI C4 C5 sing N N 125
TTI C5 TE5 doub N N 126
TTI C5 C6 sing N N 127
TTI C6 H6 sing N N 128
TTI C6 H6A sing N N 129
TTI "C1'" "O4'" sing N N 130
TTI "C1'" "C2'" sing N N 131
TTI "C1'" "H1'" sing N N 132
TTI "C2'" "C3'" sing N N 133
TTI "C2'" "H2'" sing N N 134
TTI "C2'" "H2'A" sing N N 135
TTI "C4'" "C3'" sing N N 136
TTI "C3'" "O3'" sing N N 137
TTI "C3'" "H3'" sing N N 138
TTI "O3'" "HO3'" sing N N 139
TTI "O4'" "C4'" sing N N 140
TTI "C4'" "C5'" sing N N 141
TTI "C4'" "H4'" sing N N 142
TTI "O5'" "C5'" sing N N 143
TTI "C5'" "H5'" sing N N 144
TTI "C5'" "H5'A" sing N N 145
TTI "O5'" P sing N N 146
TTI O1P P doub N N 147
TTI P O2P sing N N 148
TTI O2P HO2P sing N N 149
UMS OP3 P sing N N 150
UMS OP3 HOP3 sing N N 151
UMS P OP1 doub N N 152
UMS P OP2 sing N N 153
UMS P "O5'" sing N N 154
UMS OP2 HOP2 sing N N 155
UMS "O5'" "C5'" sing N N 156
UMS "C5'" "C4'" sing N N 157
UMS "C5'" "H5'" sing N N 158
UMS "C5'" "H5'2" sing N N 159
UMS "C4'" "O4'" sing N N 160
UMS "C4'" "C3'" sing N N 161
UMS "C4'" "H4'" sing N N 162
UMS "O4'" "C1'" sing N N 163
UMS "C3'" "O3'" sing N N 164
UMS "C3'" "C2'" sing N N 165
UMS "C3'" "H3'" sing N N 166
UMS "O3'" "HO3'" sing N N 167
UMS "C2'" "SE2'" sing N N 168
UMS "C2'" "C1'" sing N N 169
UMS "C2'" "H2'" sing N N 170
UMS "SE2'" "CA'" sing N N 171
UMS "C1'" N1 sing N N 172
UMS "C1'" "H1'" sing N N 173
UMS "CA'" "HA'" sing N N 174
UMS "CA'" "HA'2" sing N N 175
UMS "CA'" "HA'3" sing N N 176
UMS N1 C2 sing N N 177
UMS N1 C6 sing N N 178
UMS C2 O2 doub N N 179
UMS C2 N3 sing N N 180
UMS N3 C4 sing N N 181
UMS N3 H3 sing N N 182
UMS C4 O4 doub N N 183
UMS C4 C5 sing N N 184
UMS C5 C6 doub N N 185
UMS C5 H5 sing N N 186
UMS C6 H6 sing N N 187
#
_ndb_struct_conf_na.entry_id 3K18
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 A DC 8 7_556 -0.382 -0.096 -0.303 -18.917 -11.523 -2.510 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1
1 A UMS 2 1_555 A DA 7 7_556 -0.108 -0.068 0.243 -8.887 -11.661 1.494 2 A_UMS2:DA7_A A 2 ? A 7 ? 20 1
1 A DG 3 1_555 A DC 6 7_556 -0.237 -0.177 0.163 -4.606 -13.468 0.007 3 A_DG3:DC6_A A 3 ? A 6 ? 19 1
1 A TTI 4 1_555 A DA 5 7_556 -0.128 -0.172 0.365 -5.945 -9.633 -4.571 4 A_TTI4:DA5_A A 4 ? A 5 ? 20 1
1 A DA 5 1_555 A TTI 4 7_556 0.128 -0.172 0.365 5.945 -9.633 -4.571 5 A_DA5:TTI4_A A 5 ? A 4 ? 20 1
1 A DC 6 1_555 A DG 3 7_556 0.237 -0.177 0.163 4.606 -13.468 0.007 6 A_DC6:DG3_A A 6 ? A 3 ? 19 1
1 A DA 7 1_555 A UMS 2 7_556 0.108 -0.068 0.243 8.887 -11.661 1.494 7 A_DA7:UMS2_A A 7 ? A 2 ? 20 1
1 A DC 8 1_555 A DG 1 7_556 0.382 -0.096 -0.303 18.917 -11.523 -2.510 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 A DC 8 7_556 A UMS 2 1_555 A DA 7 7_556 0.397 -1.009 3.106 -3.410 12.880 31.149 -3.581 -1.171 2.454 22.727
6.018 33.813 1 AA_DG1UMS2:DA7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ?
1 A UMS 2 1_555 A DA 7 7_556 A DG 3 1_555 A DC 6 7_556 0.639 -1.491 3.052 1.905 10.824 29.976 -4.414 -0.864 2.417 20.096
-3.537 31.884 2 AA_UMS2DG3:DC6DA7_AA A 2 ? A 7 ? A 3 ? A 6 ?
1 A DG 3 1_555 A DC 6 7_556 A TTI 4 1_555 A DA 5 7_556 -0.334 -1.676 3.338 -0.517 1.190 35.148 -2.954 0.475 3.286 1.969
0.856 35.171 3 AA_DG3TTI4:DA5DC6_AA A 3 ? A 6 ? A 4 ? A 5 ?
1 A TTI 4 1_555 A DA 5 7_556 A DA 5 1_555 A TTI 4 7_556 0.000 -1.657 2.863 0.000 3.687 29.476 -3.887 0.000 2.641 7.210
0.000 29.700 4 AA_TTI4DA5:TTI4DA5_AA A 4 ? A 5 ? A 5 ? A 4 ?
1 A DA 5 1_555 A TTI 4 7_556 A DC 6 1_555 A DG 3 7_556 0.334 -1.676 3.338 0.517 1.190 35.148 -2.954 -0.475 3.286 1.969
-0.856 35.171 5 AA_DA5DC6:DG3TTI4_AA A 5 ? A 4 ? A 6 ? A 3 ?
1 A DC 6 1_555 A DG 3 7_556 A DA 7 1_555 A UMS 2 7_556 -0.639 -1.491 3.052 -1.905 10.824 29.976 -4.414 0.864 2.417 20.096
3.537 31.884 6 AA_DC6DA7:UMS2DG3_AA A 6 ? A 3 ? A 7 ? A 2 ?
1 A DA 7 1_555 A UMS 2 7_556 A DC 8 1_555 A DG 1 7_556 -0.397 -1.009 3.106 3.410 12.880 31.149 -3.581 1.171 2.454 22.727
-6.018 33.813 7 AA_DA7DC8:DG1UMS2_AA A 7 ? A 2 ? A 8 ? A 1 ?
#
_atom_sites.entry_id 3K18
_atom_sites.fract_transf_matrix[1][1] 0.023422
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.023422
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.041300
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
SE
TE
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 45.006 35.020 17.555 1.00 17.79 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? 46.399 35.167 17.266 1.00 17.40 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 46.930 33.935 16.535 1.00 17.79 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 46.785 32.765 17.386 1.00 17.30 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 46.234 33.543 15.229 1.00 17.06 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 46.770 34.276 14.139 1.00 16.79 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 46.608 32.065 15.167 1.00 15.36 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 46.462 31.635 16.608 1.00 17.15 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 45.095 31.197 16.911 1.00 16.30 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 44.125 31.913 17.579 1.00 17.04 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 42.993 31.256 17.681 1.00 16.74 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 43.226 30.046 17.061 1.00 15.99 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 42.374 28.937 16.862 1.00 16.91 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 41.207 28.830 17.252 1.00 18.49 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 43.005 27.885 16.180 1.00 16.67 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 44.316 27.928 15.734 1.00 17.22 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 44.768 26.842 15.094 1.00 17.44 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 45.128 28.974 15.913 1.00 16.32 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 44.516 29.993 16.569 1.00 15.91 ? 1 DG A C4 1
HETATM 20 P P . UMS A 1 2 ? 45.843 34.794 12.937 1.00 17.85 ? 2 UMS A P 1
HETATM 21 O OP1 . UMS A 1 2 ? 46.703 35.638 12.098 1.00 18.07 ? 2 UMS A OP1 1
HETATM 22 O OP2 . UMS A 1 2 ? 44.585 35.332 13.467 1.00 17.26 ? 2 UMS A OP2 1
HETATM 23 O "O5'" . UMS A 1 2 ? 45.472 33.472 12.109 1.00 17.53 ? 2 UMS A "O5'" 1
HETATM 24 C "C5'" . UMS A 1 2 ? 46.507 32.764 11.433 1.00 16.18 ? 2 UMS A "C5'" 1
HETATM 25 C "C4'" . UMS A 1 2 ? 46.045 31.404 10.967 1.00 17.44 ? 2 UMS A "C4'" 1
HETATM 26 O "O4'" . UMS A 1 2 ? 45.719 30.621 12.132 1.00 16.31 ? 2 UMS A "O4'" 1
HETATM 27 C "C3'" . UMS A 1 2 ? 44.759 31.400 10.160 1.00 19.21 ? 2 UMS A "C3'" 1
HETATM 28 O "O3'" . UMS A 1 2 ? 44.994 31.758 8.838 1.00 19.19 ? 2 UMS A "O3'" 1
HETATM 29 C "C2'" . UMS A 1 2 ? 44.361 29.934 10.285 1.00 19.50 ? 2 UMS A "C2'" 1
HETATM 30 SE "SE2'" . UMS A 1 2 ? 45.474 28.730 9.168 1.00 24.83 ? 2 UMS A "SE2'" 1
HETATM 31 C "C1'" . UMS A 1 2 ? 44.676 29.744 11.776 1.00 17.67 ? 2 UMS A "C1'" 1
HETATM 32 C "CA'" . UMS A 1 2 ? 44.456 27.045 9.281 1.00 20.97 ? 2 UMS A "CA'" 1
HETATM 33 N N1 . UMS A 1 2 ? 43.475 30.020 12.629 1.00 17.24 ? 2 UMS A N1 1
HETATM 34 C C2 . UMS A 1 2 ? 42.486 29.046 12.695 1.00 16.17 ? 2 UMS A C2 1
HETATM 35 O O2 . UMS A 1 2 ? 42.550 27.986 12.097 1.00 18.80 ? 2 UMS A O2 1
HETATM 36 N N3 . UMS A 1 2 ? 41.416 29.351 13.493 1.00 18.40 ? 2 UMS A N3 1
HETATM 37 C C4 . UMS A 1 2 ? 41.247 30.532 14.189 1.00 16.58 ? 2 UMS A C4 1
HETATM 38 O O4 . UMS A 1 2 ? 40.233 30.676 14.848 1.00 17.92 ? 2 UMS A O4 1
HETATM 39 C C5 . UMS A 1 2 ? 42.302 31.518 14.070 1.00 16.22 ? 2 UMS A C5 1
HETATM 40 C C6 . UMS A 1 2 ? 43.362 31.229 13.302 1.00 16.29 ? 2 UMS A C6 1
ATOM 41 P P . DG A 1 3 ? 43.863 32.573 8.039 1.00 21.96 ? 3 DG A P 1
ATOM 42 O OP1 . DG A 1 3 ? 44.610 32.984 6.867 1.00 21.51 ? 3 DG A OP1 1
ATOM 43 O OP2 . DG A 1 3 ? 43.179 33.557 8.904 1.00 23.00 ? 3 DG A OP2 1
ATOM 44 O "O5'" . DG A 1 3 ? 42.673 31.553 7.697 1.00 21.93 ? 3 DG A "O5'" 1
ATOM 45 C "C5'" . DG A 1 3 ? 42.846 30.475 6.853 1.00 21.03 ? 3 DG A "C5'" 1
ATOM 46 C "C4'" . DG A 1 3 ? 41.750 29.469 7.129 1.00 19.83 ? 3 DG A "C4'" 1
ATOM 47 O "O4'" . DG A 1 3 ? 41.756 29.154 8.547 1.00 19.67 ? 3 DG A "O4'" 1
ATOM 48 C "C3'" . DG A 1 3 ? 40.285 29.827 6.847 1.00 20.49 ? 3 DG A "C3'" 1
ATOM 49 O "O3'" . DG A 1 3 ? 39.973 29.786 5.455 1.00 20.48 ? 3 DG A "O3'" 1
ATOM 50 C "C2'" . DG A 1 3 ? 39.642 28.655 7.587 1.00 19.05 ? 3 DG A "C2'" 1
ATOM 51 C "C1'" . DG A 1 3 ? 40.490 28.631 8.872 1.00 17.28 ? 3 DG A "C1'" 1
ATOM 52 N N9 . DG A 1 3 ? 39.910 29.423 9.958 1.00 17.31 ? 3 DG A N9 1
ATOM 53 C C8 . DG A 1 3 ? 40.295 30.657 10.432 1.00 16.75 ? 3 DG A C8 1
ATOM 54 N N7 . DG A 1 3 ? 39.552 31.087 11.412 1.00 15.76 ? 3 DG A N7 1
ATOM 55 C C5 . DG A 1 3 ? 38.589 30.085 11.591 1.00 16.13 ? 3 DG A C5 1
ATOM 56 C C6 . DG A 1 3 ? 37.494 29.970 12.500 1.00 16.45 ? 3 DG A C6 1
ATOM 57 O O6 . DG A 1 3 ? 37.168 30.781 13.362 1.00 16.37 ? 3 DG A O6 1
ATOM 58 N N1 . DG A 1 3 ? 36.756 28.794 12.336 1.00 15.67 ? 3 DG A N1 1
ATOM 59 C C2 . DG A 1 3 ? 37.046 27.825 11.416 1.00 15.81 ? 3 DG A C2 1
ATOM 60 N N2 . DG A 1 3 ? 36.242 26.764 11.395 1.00 16.31 ? 3 DG A N2 1
ATOM 61 N N3 . DG A 1 3 ? 38.063 27.915 10.571 1.00 16.21 ? 3 DG A N3 1
ATOM 62 C C4 . DG A 1 3 ? 38.791 29.062 10.698 1.00 15.70 ? 3 DG A C4 1
HETATM 63 N N1 . TTI A 1 4 ? 35.063 28.835 8.555 1.00 15.69 ? 4 TTI A N1 1
HETATM 64 C C2 . TTI A 1 4 ? 34.128 28.971 9.559 1.00 14.39 ? 4 TTI A C2 1
HETATM 65 O O2 . TTI A 1 4 ? 33.268 28.164 9.750 1.00 14.76 ? 4 TTI A O2 1
HETATM 66 N N3 . TTI A 1 4 ? 34.228 30.100 10.343 1.00 14.80 ? 4 TTI A N3 1
HETATM 67 C C4 . TTI A 1 4 ? 35.162 31.104 10.180 1.00 15.70 ? 4 TTI A C4 1
HETATM 68 O O4 . TTI A 1 4 ? 35.207 32.100 10.892 1.00 16.03 ? 4 TTI A O4 1
HETATM 69 C C5 . TTI A 1 4 ? 36.089 30.902 9.095 1.00 16.20 ? 4 TTI A C5 1
HETATM 70 C C6 . TTI A 1 4 ? 36.027 29.802 8.341 1.00 15.65 ? 4 TTI A C6 1
HETATM 71 C "C1'" . TTI A 1 4 ? 35.029 27.613 7.685 1.00 15.49 ? 4 TTI A "C1'" 1
HETATM 72 C "C2'" . TTI A 1 4 ? 33.992 27.683 6.569 1.00 16.71 ? 4 TTI A "C2'" 1
HETATM 73 C "C3'" . TTI A 1 4 ? 34.847 28.154 5.396 1.00 17.42 ? 4 TTI A "C3'" 1
HETATM 74 O "O3'" . TTI A 1 4 ? 34.312 27.743 4.144 1.00 18.31 ? 4 TTI A "O3'" 1
HETATM 75 C "C4'" . TTI A 1 4 ? 36.174 27.443 5.663 1.00 17.60 ? 4 TTI A "C4'" 1
HETATM 76 O "O4'" . TTI A 1 4 ? 36.317 27.458 7.114 1.00 16.85 ? 4 TTI A "O4'" 1
HETATM 77 C "C5'" . TTI A 1 4 ? 37.386 28.054 4.972 1.00 17.91 ? 4 TTI A "C5'" 1
HETATM 78 O "O5'" . TTI A 1 4 ? 37.485 29.435 5.291 1.00 19.98 ? 4 TTI A "O5'" 1
HETATM 79 P P . TTI A 1 4 ? 38.655 30.421 4.806 1.00 20.85 ? 4 TTI A P 1
HETATM 80 O O1P . TTI A 1 4 ? 38.407 31.748 5.366 1.00 22.65 ? 4 TTI A O1P 1
HETATM 81 O O2P . TTI A 1 4 ? 38.774 30.270 3.355 1.00 22.26 ? 4 TTI A O2P 1
HETATM 82 TE TE5 . TTI A 1 4 ? 37.597 32.330 8.779 0.80 16.79 ? 4 TTI A TE5 1
ATOM 83 P P . DA A 1 5 ? 33.129 28.544 3.406 1.00 19.08 ? 5 DA A P 1
ATOM 84 O OP1 . DA A 1 5 ? 33.045 27.893 2.084 1.00 20.73 ? 5 DA A OP1 1
ATOM 85 O OP2 . DA A 1 5 ? 33.301 30.006 3.503 1.00 20.70 ? 5 DA A OP2 1
ATOM 86 O "O5'" . DA A 1 5 ? 31.826 28.168 4.243 1.00 15.76 ? 5 DA A "O5'" 1
ATOM 87 C "C5'" . DA A 1 5 ? 30.814 29.097 4.481 1.00 15.88 ? 5 DA A "C5'" 1
ATOM 88 C "C4'" . DA A 1 5 ? 29.955 28.554 5.599 1.00 16.47 ? 5 DA A "C4'" 1
ATOM 89 O "O4'" . DA A 1 5 ? 30.775 28.455 6.798 1.00 16.15 ? 5 DA A "O4'" 1
ATOM 90 C "C3'" . DA A 1 5 ? 28.786 29.456 5.982 1.00 16.05 ? 5 DA A "C3'" 1
ATOM 91 O "O3'" . DA A 1 5 ? 27.640 29.134 5.197 1.00 17.23 ? 5 DA A "O3'" 1
ATOM 92 C "C2'" . DA A 1 5 ? 28.575 29.154 7.463 1.00 16.56 ? 5 DA A "C2'" 1
ATOM 93 C "C1'" . DA A 1 5 ? 30.012 28.953 7.898 1.00 15.17 ? 5 DA A "C1'" 1
ATOM 94 N N9 . DA A 1 5 ? 30.673 30.164 8.408 1.00 13.49 ? 5 DA A N9 1
ATOM 95 C C8 . DA A 1 5 ? 31.727 30.805 7.828 1.00 14.59 ? 5 DA A C8 1
ATOM 96 N N7 . DA A 1 5 ? 32.158 31.859 8.471 1.00 13.96 ? 5 DA A N7 1
ATOM 97 C C5 . DA A 1 5 ? 31.317 31.918 9.583 1.00 13.09 ? 5 DA A C5 1
ATOM 98 C C6 . DA A 1 5 ? 31.264 32.811 10.690 1.00 13.12 ? 5 DA A C6 1
ATOM 99 N N6 . DA A 1 5 ? 32.132 33.822 10.816 1.00 14.26 ? 5 DA A N6 1
ATOM 100 N N1 . DA A 1 5 ? 30.305 32.602 11.628 1.00 14.02 ? 5 DA A N1 1
ATOM 101 C C2 . DA A 1 5 ? 29.471 31.571 11.471 1.00 14.04 ? 5 DA A C2 1
ATOM 102 N N3 . DA A 1 5 ? 29.446 30.666 10.483 1.00 15.08 ? 5 DA A N3 1
ATOM 103 C C4 . DA A 1 5 ? 30.390 30.885 9.556 1.00 14.48 ? 5 DA A C4 1
ATOM 104 P P . DC A 1 6 ? 26.632 30.264 4.710 1.00 18.38 ? 6 DC A P 1
ATOM 105 O OP1 . DC A 1 6 ? 25.580 29.511 3.982 1.00 20.61 ? 6 DC A OP1 1
ATOM 106 O OP2 . DC A 1 6 ? 27.440 31.366 4.153 1.00 18.21 ? 6 DC A OP2 1
ATOM 107 O "O5'" . DC A 1 6 ? 25.944 30.774 6.054 1.00 16.12 ? 6 DC A "O5'" 1
ATOM 108 C "C5'" . DC A 1 6 ? 25.005 29.996 6.744 1.00 15.45 ? 6 DC A "C5'" 1
ATOM 109 C "C4'" . DC A 1 6 ? 24.687 30.644 8.073 1.00 15.37 ? 6 DC A "C4'" 1
ATOM 110 O "O4'" . DC A 1 6 ? 25.921 30.788 8.814 1.00 15.34 ? 6 DC A "O4'" 1
ATOM 111 C "C3'" . DC A 1 6 ? 24.188 32.073 7.987 1.00 15.76 ? 6 DC A "C3'" 1
ATOM 112 O "O3'" . DC A 1 6 ? 22.831 32.059 7.595 1.00 17.63 ? 6 DC A "O3'" 1
ATOM 113 C "C2'" . DC A 1 6 ? 24.413 32.531 9.417 1.00 16.59 ? 6 DC A "C2'" 1
ATOM 114 C "C1'" . DC A 1 6 ? 25.813 31.955 9.610 1.00 14.85 ? 6 DC A "C1'" 1
ATOM 115 N N1 . DC A 1 6 ? 26.960 32.878 9.290 1.00 14.91 ? 6 DC A N1 1
ATOM 116 C C2 . DC A 1 6 ? 27.278 33.906 10.205 1.00 13.72 ? 6 DC A C2 1
ATOM 117 O O2 . DC A 1 6 ? 26.592 34.034 11.233 1.00 15.93 ? 6 DC A O2 1
ATOM 118 N N3 . DC A 1 6 ? 28.337 34.737 9.952 1.00 13.21 ? 6 DC A N3 1
ATOM 119 C C4 . DC A 1 6 ? 29.068 34.595 8.827 1.00 12.96 ? 6 DC A C4 1
ATOM 120 N N4 . DC A 1 6 ? 30.098 35.432 8.623 1.00 13.70 ? 6 DC A N4 1
ATOM 121 C C5 . DC A 1 6 ? 28.735 33.564 7.879 1.00 13.14 ? 6 DC A C5 1
ATOM 122 C C6 . DC A 1 6 ? 27.699 32.741 8.138 1.00 14.03 ? 6 DC A C6 1
ATOM 123 P P . DA A 1 7 ? 22.243 33.294 6.801 1.00 18.94 ? 7 DA A P 1
ATOM 124 O OP1 . DA A 1 7 ? 20.895 32.849 6.358 1.00 21.45 ? 7 DA A OP1 1
ATOM 125 O OP2 . DA A 1 7 ? 23.207 33.886 5.839 1.00 19.52 ? 7 DA A OP2 1
ATOM 126 O "O5'" . DA A 1 7 ? 22.034 34.410 7.923 1.00 19.20 ? 7 DA A "O5'" 1
ATOM 127 C "C5'" . DA A 1 7 ? 21.162 34.194 9.035 1.00 18.31 ? 7 DA A "C5'" 1
ATOM 128 C "C4'" . DA A 1 7 ? 21.252 35.389 9.983 1.00 17.96 ? 7 DA A "C4'" 1
ATOM 129 O "O4'" . DA A 1 7 ? 22.583 35.478 10.532 1.00 16.89 ? 7 DA A "O4'" 1
ATOM 130 C "C3'" . DA A 1 7 ? 21.048 36.739 9.338 1.00 17.00 ? 7 DA A "C3'" 1
ATOM 131 O "O3'" . DA A 1 7 ? 19.681 37.007 9.299 1.00 18.63 ? 7 DA A "O3'" 1
ATOM 132 C "C2'" . DA A 1 7 ? 21.794 37.704 10.252 1.00 16.95 ? 7 DA A "C2'" 1
ATOM 133 C "C1'" . DA A 1 7 ? 22.965 36.830 10.659 1.00 15.82 ? 7 DA A "C1'" 1
ATOM 134 N N9 . DA A 1 7 ? 24.207 36.989 9.922 1.00 14.28 ? 7 DA A N9 1
ATOM 135 C C8 . DA A 1 7 ? 24.665 36.279 8.843 1.00 13.20 ? 7 DA A C8 1
ATOM 136 N N7 . DA A 1 7 ? 25.846 36.654 8.423 1.00 13.56 ? 7 DA A N7 1
ATOM 137 C C5 . DA A 1 7 ? 26.176 37.689 9.286 1.00 14.47 ? 7 DA A C5 1
ATOM 138 C C6 . DA A 1 7 ? 27.327 38.515 9.386 1.00 13.66 ? 7 DA A C6 1
ATOM 139 N N6 . DA A 1 7 ? 28.378 38.397 8.577 1.00 13.90 ? 7 DA A N6 1
ATOM 140 N N1 . DA A 1 7 ? 27.345 39.463 10.369 1.00 15.29 ? 7 DA A N1 1
ATOM 141 C C2 . DA A 1 7 ? 26.287 39.572 11.196 1.00 15.11 ? 7 DA A C2 1
ATOM 142 N N3 . DA A 1 7 ? 25.163 38.858 11.195 1.00 14.49 ? 7 DA A N3 1
ATOM 143 C C4 . DA A 1 7 ? 25.182 37.911 10.228 1.00 15.04 ? 7 DA A C4 1
ATOM 144 P P . DC A 1 8 ? 19.051 37.985 8.224 1.00 20.38 ? 8 DC A P 1
ATOM 145 O OP1 . DC A 1 8 ? 17.587 37.984 8.392 1.00 21.35 ? 8 DC A OP1 1
ATOM 146 O OP2 . DC A 1 8 ? 19.594 37.586 6.925 1.00 19.96 ? 8 DC A OP2 1
ATOM 147 O "O5'" . DC A 1 8 ? 19.605 39.420 8.577 1.00 19.78 ? 8 DC A "O5'" 1
ATOM 148 C "C5'" . DC A 1 8 ? 19.143 40.102 9.739 1.00 19.18 ? 8 DC A "C5'" 1
ATOM 149 C "C4'" . DC A 1 8 ? 19.837 41.437 9.886 1.00 19.59 ? 8 DC A "C4'" 1
ATOM 150 O "O4'" . DC A 1 8 ? 21.260 41.203 9.988 1.00 19.43 ? 8 DC A "O4'" 1
ATOM 151 C "C3'" . DC A 1 8 ? 19.618 42.460 8.773 1.00 21.72 ? 8 DC A "C3'" 1
ATOM 152 O "O3'" . DC A 1 8 ? 19.219 43.695 9.349 1.00 24.17 ? 8 DC A "O3'" 1
ATOM 153 C "C2'" . DC A 1 8 ? 20.960 42.609 8.083 1.00 20.37 ? 8 DC A "C2'" 1
ATOM 154 C "C1'" . DC A 1 8 ? 21.942 42.104 9.142 1.00 19.18 ? 8 DC A "C1'" 1
ATOM 155 N N1 . DC A 1 8 ? 23.117 41.410 8.487 1.00 17.25 ? 8 DC A N1 1
ATOM 156 C C2 . DC A 1 8 ? 24.396 41.948 8.671 1.00 17.23 ? 8 DC A C2 1
ATOM 157 O O2 . DC A 1 8 ? 24.519 42.938 9.383 1.00 17.77 ? 8 DC A O2 1
ATOM 158 N N3 . DC A 1 8 ? 25.464 41.366 8.066 1.00 17.23 ? 8 DC A N3 1
ATOM 159 C C4 . DC A 1 8 ? 25.267 40.290 7.296 1.00 16.47 ? 8 DC A C4 1
ATOM 160 N N4 . DC A 1 8 ? 26.338 39.759 6.725 1.00 14.96 ? 8 DC A N4 1
ATOM 161 C C5 . DC A 1 8 ? 23.969 39.700 7.097 1.00 15.36 ? 8 DC A C5 1
ATOM 162 C C6 . DC A 1 8 ? 22.938 40.295 7.694 1.00 16.33 ? 8 DC A C6 1
HETATM 163 O O . HOH B 2 . ? 27.898 28.256 10.787 1.00 16.88 ? 11 HOH A O 1
HETATM 164 O O . HOH B 2 . ? 25.678 27.175 9.386 1.00 20.92 ? 12 HOH A O 1
HETATM 165 O O . HOH B 2 . ? 22.736 40.161 12.336 1.00 21.71 ? 13 HOH A O 1
HETATM 166 O O . HOH B 2 . ? 27.222 36.098 6.101 1.00 26.95 ? 14 HOH A O 1
HETATM 167 O O . HOH B 2 . ? 41.123 32.767 19.152 1.00 33.88 ? 15 HOH A O 1
HETATM 168 O O . HOH B 2 . ? 23.178 36.617 5.184 1.00 32.74 ? 16 HOH A O 1
HETATM 169 O O . HOH B 2 . ? 38.376 25.828 8.726 1.00 23.21 ? 17 HOH A O 1
HETATM 170 O O . HOH B 2 . ? 23.232 28.406 10.158 1.00 22.80 ? 18 HOH A O 1
HETATM 171 O O . HOH B 2 . ? 25.820 37.647 4.699 1.00 25.72 ? 19 HOH A O 1
HETATM 172 O O . HOH B 2 . ? 39.531 33.784 12.376 1.00 30.57 ? 20 HOH A O 1
HETATM 173 O O . HOH B 2 . ? 47.652 38.149 13.141 1.00 24.21 ? 21 HOH A O 1
HETATM 174 O O . HOH B 2 . ? 43.229 25.326 12.174 1.00 25.28 ? 22 HOH A O 1
HETATM 175 O O . HOH B 2 . ? 17.003 42.530 11.269 1.00 28.79 ? 23 HOH A O 1
HETATM 176 O O . HOH B 2 . ? 46.392 25.501 12.169 1.00 31.35 ? 24 HOH A O 1
HETATM 177 O O . HOH B 2 . ? 47.178 35.905 9.174 1.00 35.43 ? 25 HOH A O 1
HETATM 178 O O . HOH B 2 . ? 31.788 35.157 6.326 1.00 30.35 ? 26 HOH A O 1
HETATM 179 O O . HOH B 2 . ? 43.572 36.350 15.840 1.00 33.17 ? 27 HOH A O 1
HETATM 180 O O . HOH B 2 . ? 34.000 33.884 7.670 1.00 28.90 ? 28 HOH A O 1
HETATM 181 O O . HOH B 2 . ? 41.914 34.738 11.622 1.00 40.96 ? 29 HOH A O 1
HETATM 182 O O . HOH B 2 . ? 44.125 36.679 9.501 1.00 43.50 ? 30 HOH A O 1
HETATM 183 O O . HOH B 2 . ? 24.423 26.675 4.962 1.00 35.16 ? 31 HOH A O 1
HETATM 184 O O . HOH B 2 . ? 33.750 31.586 5.219 1.00 31.77 ? 32 HOH A O 1
HETATM 185 O O . HOH B 2 . ? 30.983 32.913 4.734 1.00 35.85 ? 33 HOH A O 1
HETATM 186 O O . HOH B 2 . ? 35.660 33.121 5.477 1.00 39.12 ? 34 HOH A O 1
HETATM 187 O O . HOH B 2 . ? 18.063 33.583 6.687 1.00 43.10 ? 35 HOH A O 1
HETATM 188 O O . HOH B 2 . ? 28.046 33.914 4.488 1.00 34.62 ? 36 HOH A O 1
HETATM 189 O O . HOH B 2 . ? 29.616 34.918 2.536 1.00 45.03 ? 37 HOH A O 1
HETATM 190 O O . HOH B 2 . ? 39.209 33.962 8.167 1.00 41.00 ? 38 HOH A O 1
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