data_3IXN
#
_entry.id 3IXN
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.389
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3IXN pdb_00003ixn 10.2210/pdb3ixn/pdb
NDB NA0140 ? ?
RCSB RCSB054993 ? ?
WWPDB D_1000054993 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2010-09-15
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2024-03-20
4 'Structure model' 1 3 2024-04-03
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 4 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' struct_site
5 4 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3IXN
_pdbx_database_status.recvd_initial_deposition_date 2009-09-04
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Venkadesh, S.' 1
'Mandal, P.K.' 2
'Gautham, N.' 3
#
_citation.id primary
_citation.title 'Crystal Structure of inverted repeat sequence d(CCGGTACCGG)as B-DNA duplex'
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Venkadesh, S.' 1 ?
primary 'Mandal, P.K.' 2 ?
primary 'Gautham, N.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
;
3045.992 2 ? ? ? ?
2 non-polymer syn 'COBALT (II) ION' 58.933 3 ? ? ? ?
3 water nat water 18.015 11 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DT)(DA)(DC)(DC)(DG)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CCGGTACCGG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'COBALT (II) ION' CO
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DT n
1 6 DA n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'Chemically synthethised'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC DC A . n
A 1 2 DC 2 2 2 DC DC A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DG 4 4 4 DG DG A . n
A 1 5 DT 5 5 5 DT DT A . n
A 1 6 DA 6 6 6 DA DA A . n
A 1 7 DC 7 7 7 DC DC A . n
A 1 8 DC 8 8 8 DC DC A . n
A 1 9 DG 9 9 9 DG DG A . n
A 1 10 DG 10 10 10 DG DG A . n
B 1 1 DC 1 1 1 DC DC B . n
B 1 2 DC 2 2 2 DC DC B . n
B 1 3 DG 3 3 3 DG DG B . n
B 1 4 DG 4 4 4 DG DG B . n
B 1 5 DT 5 5 5 DT DT B . n
B 1 6 DA 6 6 6 DA DA B . n
B 1 7 DC 7 7 7 DC DC B . n
B 1 8 DC 8 8 8 DC DC B . n
B 1 9 DG 9 9 9 DG DG B . n
B 1 10 DG 10 10 10 DG DG B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CO 1 11 1 CO CO A .
D 2 CO 1 11 2 CO CO B .
E 2 CO 1 12 3 CO CO B .
F 3 HOH 1 12 1 HOH HOH A .
F 3 HOH 2 13 3 HOH HOH A .
F 3 HOH 3 14 4 HOH HOH A .
F 3 HOH 4 15 6 HOH HOH A .
F 3 HOH 5 16 7 HOH HOH A .
F 3 HOH 6 17 8 HOH HOH A .
G 3 HOH 1 13 2 HOH HOH B .
G 3 HOH 2 14 5 HOH HOH B .
G 3 HOH 3 15 9 HOH HOH B .
G 3 HOH 4 16 10 HOH HOH B .
G 3 HOH 5 18 11 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
MAR345dtb 'data collection' . ? 1
AMoRE phasing . ? 2
REFMAC refinement 5.2.0019 ? 3
AUTOMAR 'data reduction' . ? 4
SCALEPACK 'data scaling' . ? 5
#
_cell.entry_id 3IXN
_cell.length_a 32.940
_cell.length_b 32.940
_cell.length_c 94.854
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3IXN
_symmetry.space_group_name_H-M 'P 61'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 169
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3IXN
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.44
_exptl_crystal.density_percent_sol 49.56
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pdbx_details '5mM CoCl2, 1mM spermine, 50% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'MAR CCD 165 mm'
_diffrn_detector.pdbx_collection_date 2009-06-26
_diffrn_detector.details 'Double Crystal'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'double crystal'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.54
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ELETTRA BEAMLINE 5.2R'
_diffrn_source.pdbx_synchrotron_site ELETTRA
_diffrn_source.pdbx_synchrotron_beamline 5.2R
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.54
#
_reflns.entry_id 3IXN
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 30.0
_reflns.d_resolution_high 2.87
_reflns.number_obs 1365
_reflns.number_all 1378
_reflns.percent_possible_obs 99.4
_reflns.pdbx_Rmerge_I_obs 0.094
_reflns.pdbx_Rsym_value 0.081
_reflns.pdbx_netI_over_sigmaI 6.2
_reflns.B_iso_Wilson_estimate 69.9
_reflns.pdbx_redundancy 10.1
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.87
_reflns_shell.d_res_low 2.97
_reflns_shell.percent_possible_all 97.8
_reflns_shell.Rmerge_I_obs 0.286
_reflns_shell.pdbx_Rsym_value 0.279
_reflns_shell.meanI_over_sigI_obs 1.2
_reflns_shell.pdbx_redundancy 10.8
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 135
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3IXN
_refine.ls_number_reflns_obs 1160
_refine.ls_number_reflns_all 1365
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 28.53
_refine.ls_d_res_high 2.87
_refine.ls_percent_reflns_obs 91.20
_refine.ls_R_factor_obs 0.26212
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.26146
_refine.ls_R_factor_R_free 0.27469
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.2
_refine.ls_number_reflns_R_free 63
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.923
_refine.correlation_coeff_Fo_to_Fc_free 0.910
_refine.B_iso_mean 39.728
_refine.aniso_B[1][1] -16.39
_refine.aniso_B[2][2] -16.39
_refine.aniso_B[3][3] 32.77
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model 'Fiber model built in INSIGHTII software'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model Isotropic
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free 0.105
_refine.overall_SU_ML 0.330
_refine.overall_SU_B 17.290
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3IXN
_refine_analyze.Luzzati_coordinate_error_obs 0.635
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 404
_refine_hist.pdbx_number_atoms_ligand 3
_refine_hist.number_atoms_solvent 11
_refine_hist.number_atoms_total 418
_refine_hist.d_res_high 2.87
_refine_hist.d_res_low 28.53
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.025 0.021 ? 452 'X-RAY DIFFRACTION' ?
r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 3.964 3.000 ? 694 'X-RAY DIFFRACTION' ?
r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.227 0.200 ? 78 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.018 0.020 ? 210 'X-RAY DIFFRACTION' ?
r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_scbond_it 5.568 3.000 ? 452 'X-RAY DIFFRACTION' ?
r_scangle_it 7.405 4.500 ? 694 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.873
_refine_ls_shell.d_res_low 2.947
_refine_ls_shell.number_reflns_R_work 88
_refine_ls_shell.R_factor_R_work 0.682
_refine_ls_shell.percent_reflns_obs 100.00
_refine_ls_shell.R_factor_R_free 0.933
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 6
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs 91
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 3IXN
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3IXN
_struct.title 'Crystal structure of d(CCGGTACCGG) as B-DNA duplex'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag N
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3IXN
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'B-DNA, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 2 ?
F N N 3 ?
G N N 3 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3IXN
_struct_ref.pdbx_db_accession 3IXN
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3IXN A 1 ? 10 ? 3IXN 1 ? 10 ? 1 10
2 1 3IXN B 1 ? 10 ? 3IXN 1 ? 10 ? 1 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 900 ?
1 MORE -3 ?
1 'SSA (A^2)' 3830 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? B DG 9 N7 ? ? ? 1_555 E CO . CO ? ? B DG 9 B CO 12 1_555 ? ? ? ? ? ? ? 2.366 ? ?
metalc2 metalc ? ? D CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 11 B HOH 13 1_555 ? ? ? ? ? ? ? 2.280 ? ?
metalc3 metalc ? ? D CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 11 B HOH 18 1_555 ? ? ? ? ? ? ? 2.292 ? ?
metalc4 metalc ? ? E CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 12 B HOH 16 1_555 ? ? ? ? ? ? ? 2.499 ? ?
hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 1 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ?
hydrog2 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ?
hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ?
hydrog10 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ?
hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 N7 ? B DG 9 ? B DG 9 ? 1_555 CO ? E CO . ? B CO 12 ? 1_555 O ? G HOH . ? B HOH 16 ? 1_555 68.4 ?
2 O ? G HOH . ? B HOH 13 ? 1_555 CO ? D CO . ? B CO 11 ? 1_555 O ? G HOH . ? B HOH 18 ? 1_555 163.6 ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A CO 11 ? 2 'BINDING SITE FOR RESIDUE CO A 11'
AC2 Software B CO 11 ? 3 'BINDING SITE FOR RESIDUE CO B 11'
AC3 Software B CO 12 ? 2 'BINDING SITE FOR RESIDUE CO B 12'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 DG A 3 ? DG A 3 . ? 1_555 ?
2 AC1 2 DG A 4 ? DG A 4 . ? 1_555 ?
3 AC2 3 DG B 3 ? DG B 3 . ? 1_555 ?
4 AC2 3 HOH G . ? HOH B 13 . ? 1_555 ?
5 AC2 3 HOH G . ? HOH B 18 . ? 1_555 ?
6 AC3 2 DG B 9 ? DG B 9 . ? 1_555 ?
7 AC3 2 HOH G . ? HOH B 16 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 N1 A DC 2 ? ? C2 A DC 2 ? ? 1.478 1.397 0.081 0.010 N
2 1 C5 A DG 9 ? ? N7 A DG 9 ? ? 1.435 1.388 0.047 0.006 N
3 1 "C1'" A DG 10 ? ? N9 A DG 10 ? ? 1.706 1.488 0.218 0.013 N
4 1 "C5'" B DC 1 ? ? "C4'" B DC 1 ? ? 1.555 1.512 0.043 0.007 N
5 1 C2 B DG 4 ? ? N3 B DG 4 ? ? 1.373 1.323 0.050 0.008 N
6 1 C4 B DG 4 ? ? C5 B DG 4 ? ? 1.333 1.379 -0.046 0.007 N
7 1 "O3'" B DT 5 ? ? "C3'" B DT 5 ? ? 1.328 1.419 -0.091 0.006 N
8 1 "C1'" B DC 7 ? ? N1 B DC 7 ? ? 1.586 1.488 0.098 0.013 N
9 1 N1 B DC 7 ? ? C2 B DC 7 ? ? 1.460 1.397 0.063 0.010 N
10 1 "C5'" B DC 8 ? ? "C4'" B DC 8 ? ? 1.556 1.512 0.044 0.007 N
11 1 C2 B DG 10 ? ? N3 B DG 10 ? ? 1.377 1.323 0.054 0.008 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 110.36 106.80 3.56 0.50 N
2 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.35 108.30 4.05 0.30 N
3 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 100.88 104.50 -3.62 0.40 N
4 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.89 118.90 4.99 0.60 N
5 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 115.59 121.90 -6.31 0.70 N
6 1 C6 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 112.81 120.80 -7.99 1.20 N
7 1 C2 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 127.59 118.80 8.79 1.10 N
8 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DG 3 ? ? 132.80 119.70 13.10 1.20 Y
9 1 C6 A DG 3 ? ? N1 A DG 3 ? ? C2 A DG 3 ? ? 121.23 125.10 -3.87 0.60 N
10 1 N3 A DG 3 ? ? C4 A DG 3 ? ? C5 A DG 3 ? ? 123.30 128.60 -5.30 0.50 N
11 1 C5 A DG 3 ? ? C6 A DG 3 ? ? N1 A DG 3 ? ? 115.40 111.50 3.90 0.50 N
12 1 N7 A DG 3 ? ? C8 A DG 3 ? ? N9 A DG 3 ? ? 116.31 113.10 3.21 0.50 N
13 1 C8 A DG 3 ? ? N9 A DG 3 ? ? C4 A DG 3 ? ? 101.20 106.40 -5.20 0.40 N
14 1 N9 A DG 3 ? ? C4 A DG 3 ? ? C5 A DG 3 ? ? 108.95 105.40 3.55 0.40 N
15 1 N1 A DG 3 ? ? C6 A DG 3 ? ? O6 A DG 3 ? ? 113.73 119.90 -6.17 0.60 N
16 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 131.47 119.70 11.77 1.20 Y
17 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.48 102.20 -4.72 0.70 N
18 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.22 108.30 2.92 0.30 N
19 1 N3 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 124.87 128.60 -3.73 0.50 N
20 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.99 106.40 -2.41 0.40 N
21 1 N3 A DG 4 ? ? C4 A DG 4 ? ? N9 A DG 4 ? ? 129.86 126.00 3.86 0.60 N
22 1 C6 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 125.63 130.40 -4.77 0.60 N
23 1 N1 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 110.35 116.20 -5.85 0.90 N
24 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 125.03 119.90 5.13 0.70 N
25 1 "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? "C1'" A DT 5 ? ? 95.06 102.40 -7.34 0.80 N
26 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.86 108.30 3.56 0.30 N
27 1 "C3'" A DA 6 ? ? "C2'" A DA 6 ? ? "C1'" A DA 6 ? ? 97.22 102.40 -5.18 0.80 N
28 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 101.79 108.00 -6.21 0.70 N
29 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.39 108.30 3.09 0.30 N
30 1 "C3'" A DC 7 ? ? "O3'" A DC 7 ? ? P A DC 8 ? ? 132.49 119.70 12.79 1.20 Y
31 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 100.55 104.50 -3.95 0.40 N
32 1 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? "O4'" A DG 9 ? ? 118.75 109.80 8.95 1.10 N
33 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 118.23 108.30 9.93 0.30 N
34 1 C4 A DG 9 ? ? C5 A DG 9 ? ? C6 A DG 9 ? ? 114.98 118.80 -3.82 0.60 N
35 1 C5 A DG 9 ? ? C6 A DG 9 ? ? N1 A DG 9 ? ? 114.79 111.50 3.29 0.50 N
36 1 C4 A DG 9 ? ? C5 A DG 9 ? ? N7 A DG 9 ? ? 113.41 110.80 2.61 0.40 N
37 1 N9 A DG 9 ? ? C4 A DG 9 ? ? C5 A DG 9 ? ? 102.84 105.40 -2.56 0.40 N
38 1 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 115.54 119.90 -4.36 0.60 N
39 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 98.14 108.00 -9.86 0.70 N
40 1 C5 A DG 10 ? ? N7 A DG 10 ? ? C8 A DG 10 ? ? 100.88 104.30 -3.42 0.50 N
41 1 N7 A DG 10 ? ? C8 A DG 10 ? ? N9 A DG 10 ? ? 117.84 113.10 4.74 0.50 N
42 1 C8 A DG 10 ? ? N9 A DG 10 ? ? C4 A DG 10 ? ? 101.27 106.40 -5.13 0.40 N
43 1 "O4'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 100.74 104.50 -3.76 0.40 N
44 1 "C5'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 124.19 115.70 8.49 1.20 N
45 1 "C1'" B DC 2 ? ? "O4'" B DC 2 ? ? "C4'" B DC 2 ? ? 114.80 110.30 4.50 0.70 N
46 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 124.33 118.90 5.43 0.60 N
47 1 C6 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 105.48 120.80 -15.32 1.20 N
48 1 C2 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 132.69 118.80 13.89 1.10 N
49 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 102.36 108.00 -5.64 0.70 N
50 1 C5 B DG 3 ? ? C6 B DG 3 ? ? O6 B DG 3 ? ? 124.64 128.60 -3.96 0.60 N
51 1 C6 B DG 4 ? ? N1 B DG 4 ? ? C2 B DG 4 ? ? 121.14 125.10 -3.96 0.60 N
52 1 C2 B DG 4 ? ? N3 B DG 4 ? ? C4 B DG 4 ? ? 116.16 111.90 4.26 0.50 N
53 1 N3 B DG 4 ? ? C4 B DG 4 ? ? C5 B DG 4 ? ? 125.57 128.60 -3.03 0.50 N
54 1 N3 B DG 4 ? ? C2 B DG 4 ? ? N2 B DG 4 ? ? 125.60 119.90 5.70 0.70 N
55 1 C5 B DG 4 ? ? C6 B DG 4 ? ? O6 B DG 4 ? ? 124.30 128.60 -4.30 0.60 N
56 1 "C3'" B DG 4 ? ? "O3'" B DG 4 ? ? P B DT 5 ? ? 110.43 119.70 -9.27 1.20 Y
57 1 "O5'" B DT 5 ? ? "C5'" B DT 5 ? ? "C4'" B DT 5 ? ? 104.04 109.40 -5.36 0.80 N
58 1 "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? 95.14 104.50 -9.36 0.40 N
59 1 "C1'" B DT 5 ? ? "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? 103.69 110.10 -6.41 1.00 N
60 1 "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? "C1'" B DT 5 ? ? 96.30 102.40 -6.10 0.80 N
61 1 "O4'" B DT 5 ? ? "C1'" B DT 5 ? ? N1 B DT 5 ? ? 115.52 108.30 7.22 0.30 N
62 1 N1 B DT 5 ? ? C2 B DT 5 ? ? O2 B DT 5 ? ? 128.52 123.10 5.42 0.80 N
63 1 "C3'" B DT 5 ? ? "O3'" B DT 5 ? ? P B DA 6 ? ? 97.98 119.70 -21.72 1.20 Y
64 1 "O5'" B DA 6 ? ? P B DA 6 ? ? OP1 B DA 6 ? ? 118.34 110.70 7.64 1.20 N
65 1 "O5'" B DA 6 ? ? P B DA 6 ? ? OP2 B DA 6 ? ? 99.65 105.70 -6.05 0.90 N
66 1 "O4'" B DA 6 ? ? "C4'" B DA 6 ? ? "C3'" B DA 6 ? ? 101.42 104.50 -3.08 0.40 N
67 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? "C3'" B DC 7 ? ? 123.19 115.70 7.49 1.20 N
68 1 "C1'" B DC 7 ? ? "O4'" B DC 7 ? ? "C4'" B DC 7 ? ? 102.58 110.10 -7.52 1.00 N
69 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? "C2'" B DC 7 ? ? 99.23 105.90 -6.67 0.80 N
70 1 N1 B DC 7 ? ? C2 B DC 7 ? ? N3 B DC 7 ? ? 114.77 119.20 -4.43 0.70 N
71 1 N1 B DC 7 ? ? C2 B DC 7 ? ? O2 B DC 7 ? ? 126.68 118.90 7.78 0.60 N
72 1 C6 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 106.22 120.80 -14.58 1.20 N
73 1 C2 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 131.09 118.80 12.29 1.10 N
74 1 "O4'" B DC 8 ? ? "C4'" B DC 8 ? ? "C3'" B DC 8 ? ? 99.95 104.50 -4.55 0.40 N
75 1 "C3'" B DC 8 ? ? "C2'" B DC 8 ? ? "C1'" B DC 8 ? ? 97.12 102.40 -5.28 0.80 N
76 1 N3 B DC 8 ? ? C4 B DC 8 ? ? C5 B DC 8 ? ? 125.39 121.90 3.49 0.40 N
77 1 "C1'" B DG 9 ? ? "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? 103.21 110.10 -6.89 1.00 N
78 1 "C3'" B DG 9 ? ? "C2'" B DG 9 ? ? "C1'" B DG 9 ? ? 97.17 102.40 -5.23 0.80 N
79 1 N9 B DG 9 ? ? "C1'" B DG 9 ? ? "C2'" B DG 9 ? ? 124.91 114.30 10.61 1.40 N
80 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 110.94 108.30 2.64 0.30 N
81 1 N3 B DG 9 ? ? C4 B DG 9 ? ? C5 B DG 9 ? ? 131.65 128.60 3.05 0.50 N
82 1 C4 B DG 9 ? ? C5 B DG 9 ? ? C6 B DG 9 ? ? 114.36 118.80 -4.44 0.60 N
83 1 C5 B DG 9 ? ? C6 B DG 9 ? ? N1 B DG 9 ? ? 116.77 111.50 5.27 0.50 N
84 1 C4 B DG 9 ? ? C5 B DG 9 ? ? N7 B DG 9 ? ? 115.52 110.80 4.72 0.40 N
85 1 C5 B DG 9 ? ? N7 B DG 9 ? ? C8 B DG 9 ? ? 98.29 104.30 -6.01 0.50 N
86 1 N7 B DG 9 ? ? C8 B DG 9 ? ? N9 B DG 9 ? ? 116.70 113.10 3.60 0.50 N
87 1 N1 B DG 9 ? ? C2 B DG 9 ? ? N2 B DG 9 ? ? 122.58 116.20 6.38 0.90 N
88 1 N3 B DG 9 ? ? C2 B DG 9 ? ? N2 B DG 9 ? ? 115.11 119.90 -4.79 0.70 N
89 1 C5 B DG 9 ? ? C6 B DG 9 ? ? O6 B DG 9 ? ? 121.31 128.60 -7.29 0.60 N
90 1 C8 B DG 9 ? ? N9 B DG 9 ? ? "C1'" B DG 9 ? ? 135.28 127.00 8.28 1.30 N
91 1 "C3'" B DG 9 ? ? "O3'" B DG 9 ? ? P B DG 10 ? ? 131.36 119.70 11.66 1.20 Y
92 1 N3 B DG 10 ? ? C4 B DG 10 ? ? N9 B DG 10 ? ? 129.85 126.00 3.85 0.60 N
93 1 C6 B DG 10 ? ? C5 B DG 10 ? ? N7 B DG 10 ? ? 125.04 130.40 -5.36 0.60 N
94 1 N3 B DG 10 ? ? C2 B DG 10 ? ? N2 B DG 10 ? ? 124.74 119.90 4.84 0.70 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CO CO CO N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3IXN 'double helix'
3IXN 'b-form double helix'
3IXN 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 10 1_555 0.008 -0.017 0.609 2.381 -5.555 -12.514 1 A_DC1:DG10_B A 1 ? B 10 ? 19 1
1 A DC 2 1_555 B DG 9 1_555 -0.702 0.039 0.628 -5.797 -1.697 -22.281 2 A_DC2:DG9_B A 2 ? B 9 ? ? 1
1 A DG 3 1_555 B DC 8 1_555 1.171 -0.142 0.318 9.384 -9.562 -22.896 3 A_DG3:DC8_B A 3 ? B 8 ? 19 1
1 A DG 4 1_555 B DC 7 1_555 0.431 0.232 0.290 4.346 -3.784 -14.422 4 A_DG4:DC7_B A 4 ? B 7 ? 19 1
1 A DA 6 1_555 B DT 5 1_555 0.739 -0.468 0.654 20.141 -15.783 -13.738 5 A_DA6:DT5_B A 6 ? B 5 ? 20 1
1 A DC 7 1_555 B DG 4 1_555 0.196 -0.463 -0.025 2.131 1.814 -4.027 6 A_DC7:DG4_B A 7 ? B 4 ? 19 1
1 A DC 8 1_555 B DG 3 1_555 -0.055 -0.339 0.770 -10.571 2.224 -9.753 7 A_DC8:DG3_B A 8 ? B 3 ? 19 1
1 A DG 9 1_555 B DC 2 1_555 0.167 0.116 0.912 5.780 -1.820 -17.856 8 A_DG9:DC2_B A 9 ? B 2 ? 19 1
1 A DG 10 1_555 B DC 1 1_555 0.704 -0.057 0.449 2.256 -2.504 -14.833 9 A_DG10:DC1_B A 10 ? B 1 ? ? 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 1.295 -1.381 3.199 -5.599 7.871 50.407 -2.099 -1.855 2.819 9.145 6.505
51.264 1 AA_DC1DC2:DG9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ?
1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.730 0.950 3.108 3.750 -0.094 27.125 2.028 2.411 2.978 -0.198 -7.947
27.379 2 AA_DC2DG3:DC8DG9_BB A 2 ? B 9 ? A 3 ? B 8 ?
1 A DG 3 1_555 B DC 8 1_555 A DG 4 1_555 B DC 7 1_555 0.205 0.053 3.524 -6.037 -0.915 35.063 0.229 -1.279 3.440 -1.505 9.928
35.575 3 AA_DG3DG4:DC7DC8_BB A 3 ? B 8 ? A 4 ? B 7 ?
1 A DG 4 1_555 B DC 7 1_555 A DA 6 1_555 B DT 5 1_555 0.349 -0.965 6.547 -4.092 -2.072 68.201 -0.704 -0.618 6.543 -1.846 3.645
68.336 4 AA_DG4DA6:DT5DC7_BB A 4 ? B 7 ? A 6 ? B 5 ?
1 A DA 6 1_555 B DT 5 1_555 A DC 7 1_555 B DG 4 1_555 0.276 -1.060 3.683 3.895 0.828 29.728 -2.240 0.370 3.658 1.604 -7.549
29.987 5 AA_DA6DC7:DG4DT5_BB A 6 ? B 5 ? A 7 ? B 4 ?
1 A DC 7 1_555 B DG 4 1_555 A DC 8 1_555 B DG 3 1_555 -0.287 -0.116 3.673 -2.341 -2.956 36.905 0.263 0.098 3.682 -4.654 3.686
37.090 6 AA_DC7DC8:DG3DG4_BB A 7 ? B 4 ? A 8 ? B 3 ?
1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 0.503 0.148 2.952 5.374 1.203 18.241 -0.125 1.040 2.978 3.687
-16.472 19.048 7 AA_DC8DG9:DC2DG3_BB A 8 ? B 3 ? A 9 ? B 2 ?
1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 -0.019 -0.339 3.286 -0.553 7.603 45.669 -1.077 -0.023 3.193 9.715 0.707
46.267 8 AA_DG9DG10:DC1DC2_BB A 9 ? B 2 ? A 10 ? B 1 ?
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'in silico model'
_pdbx_initial_refinement_model.source_name InsightII
_pdbx_initial_refinement_model.details 'Fiber model built in INSIGHTII software'
#
loop_
_pdbx_reflns_twin.domain_id
_pdbx_reflns_twin.crystal_id
_pdbx_reflns_twin.diffrn_id
_pdbx_reflns_twin.type
_pdbx_reflns_twin.operator
_pdbx_reflns_twin.fraction
1 1 1 ? 'H, K, L' 0.539
2 1 1 ? '-H-K, K, -L' 0.461
#
_atom_sites.entry_id 3IXN
_atom_sites.fract_transf_matrix[1][1] 0.030358
_atom_sites.fract_transf_matrix[1][2] 0.017527
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.035055
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.010543
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CO
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 13.955 -0.596 8.111 1.00 39.56 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 13.401 0.078 6.966 1.00 35.77 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 14.339 0.227 5.778 1.00 30.45 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 14.595 -1.108 5.288 1.00 23.72 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 13.718 0.944 4.565 1.00 35.77 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 13.649 2.416 4.621 1.00 44.20 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 14.470 0.375 3.343 1.00 28.36 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 14.973 -0.970 3.905 1.00 26.39 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 14.800 -2.287 3.114 1.00 13.70 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 14.881 -2.349 1.706 1.00 19.53 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 15.026 -1.259 1.077 1.00 19.21 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 14.752 -3.604 1.108 1.00 11.68 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 14.619 -4.739 1.847 1.00 15.57 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 14.525 -5.963 1.259 1.00 11.85 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 14.544 -4.660 3.275 1.00 11.17 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 14.626 -3.444 3.833 1.00 12.11 ? 1 DC A C6 1
ATOM 17 P P . DC A 1 2 ? 12.254 3.185 4.264 1.00 51.37 ? 2 DC A P 1
ATOM 18 O OP1 . DC A 1 2 ? 12.212 4.504 4.959 1.00 46.75 ? 2 DC A OP1 1
ATOM 19 O OP2 . DC A 1 2 ? 11.144 2.248 4.553 1.00 52.64 ? 2 DC A OP2 1
ATOM 20 O "O5'" . DC A 1 2 ? 12.343 3.311 2.661 1.00 49.92 ? 2 DC A "O5'" 1
ATOM 21 C "C5'" . DC A 1 2 ? 13.098 2.351 1.852 1.00 53.01 ? 2 DC A "C5'" 1
ATOM 22 C "C4'" . DC A 1 2 ? 12.344 1.580 0.753 1.00 60.27 ? 2 DC A "C4'" 1
ATOM 23 O "O4'" . DC A 1 2 ? 12.658 0.161 0.728 1.00 51.95 ? 2 DC A "O4'" 1
ATOM 24 C "C3'" . DC A 1 2 ? 10.822 1.537 0.795 1.00 56.93 ? 2 DC A "C3'" 1
ATOM 25 O "O3'" . DC A 1 2 ? 10.279 2.932 0.708 1.00 59.98 ? 2 DC A "O3'" 1
ATOM 26 C "C2'" . DC A 1 2 ? 10.580 0.481 -0.306 1.00 53.66 ? 2 DC A "C2'" 1
ATOM 27 C "C1'" . DC A 1 2 ? 11.831 -0.420 -0.264 1.00 55.61 ? 2 DC A "C1'" 1
ATOM 28 N N1 . DC A 1 2 ? 11.706 -1.902 0.145 1.00 53.65 ? 2 DC A N1 1
ATOM 29 C C2 . DC A 1 2 ? 11.652 -3.081 -0.744 1.00 64.90 ? 2 DC A C2 1
ATOM 30 O O2 . DC A 1 2 ? 11.649 -3.013 -1.996 1.00 65.13 ? 2 DC A O2 1
ATOM 31 N N3 . DC A 1 2 ? 11.638 -4.359 -0.215 1.00 61.07 ? 2 DC A N3 1
ATOM 32 C C4 . DC A 1 2 ? 11.690 -4.484 1.123 1.00 63.98 ? 2 DC A C4 1
ATOM 33 N N4 . DC A 1 2 ? 11.674 -5.742 1.600 1.00 57.35 ? 2 DC A N4 1
ATOM 34 C C5 . DC A 1 2 ? 11.769 -3.334 2.026 1.00 56.87 ? 2 DC A C5 1
ATOM 35 C C6 . DC A 1 2 ? 11.779 -2.087 1.501 1.00 60.66 ? 2 DC A C6 1
ATOM 36 P P . DG A 1 3 ? 9.618 3.783 -0.503 1.00 61.10 ? 3 DG A P 1
ATOM 37 O OP1 . DG A 1 3 ? 10.680 4.610 -1.151 1.00 59.68 ? 3 DG A OP1 1
ATOM 38 O OP2 . DG A 1 3 ? 8.494 4.569 0.087 1.00 53.30 ? 3 DG A OP2 1
ATOM 39 O "O5'" . DG A 1 3 ? 9.123 2.582 -1.485 1.00 53.30 ? 3 DG A "O5'" 1
ATOM 40 C "C5'" . DG A 1 3 ? 9.737 2.344 -2.789 1.00 47.47 ? 3 DG A "C5'" 1
ATOM 41 C "C4'" . DG A 1 3 ? 8.763 1.589 -3.669 1.00 39.99 ? 3 DG A "C4'" 1
ATOM 42 O "O4'" . DG A 1 3 ? 8.880 0.171 -3.345 1.00 39.46 ? 3 DG A "O4'" 1
ATOM 43 C "C3'" . DG A 1 3 ? 7.331 2.005 -3.377 1.00 37.99 ? 3 DG A "C3'" 1
ATOM 44 O "O3'" . DG A 1 3 ? 6.608 2.734 -4.460 1.00 42.44 ? 3 DG A "O3'" 1
ATOM 45 C "C2'" . DG A 1 3 ? 6.688 0.742 -2.751 1.00 35.61 ? 3 DG A "C2'" 1
ATOM 46 C "C1'" . DG A 1 3 ? 7.664 -0.427 -2.946 1.00 30.48 ? 3 DG A "C1'" 1
ATOM 47 N N9 . DG A 1 3 ? 7.906 -1.373 -1.817 1.00 21.53 ? 3 DG A N9 1
ATOM 48 C C8 . DG A 1 3 ? 7.951 -1.102 -0.463 1.00 27.32 ? 3 DG A C8 1
ATOM 49 N N7 . DG A 1 3 ? 8.190 -2.141 0.341 1.00 17.45 ? 3 DG A N7 1
ATOM 50 C C5 . DG A 1 3 ? 8.316 -3.198 -0.529 1.00 7.52 ? 3 DG A C5 1
ATOM 51 C C6 . DG A 1 3 ? 8.573 -4.558 -0.248 1.00 2.00 ? 3 DG A C6 1
ATOM 52 O O6 . DG A 1 3 ? 8.755 -5.137 0.819 1.00 2.00 ? 3 DG A O6 1
ATOM 53 N N1 . DG A 1 3 ? 8.600 -5.384 -1.332 1.00 2.00 ? 3 DG A N1 1
ATOM 54 C C2 . DG A 1 3 ? 8.423 -4.904 -2.584 1.00 6.64 ? 3 DG A C2 1
ATOM 55 N N2 . DG A 1 3 ? 8.529 -5.892 -3.496 1.00 8.50 ? 3 DG A N2 1
ATOM 56 N N3 . DG A 1 3 ? 8.184 -3.599 -2.907 1.00 12.09 ? 3 DG A N3 1
ATOM 57 C C4 . DG A 1 3 ? 8.142 -2.765 -1.826 1.00 13.59 ? 3 DG A C4 1
ATOM 58 P P . DG A 1 4 ? 6.590 2.523 -6.089 1.00 50.54 ? 4 DG A P 1
ATOM 59 O OP1 . DG A 1 4 ? 7.996 2.444 -6.537 1.00 45.33 ? 4 DG A OP1 1
ATOM 60 O OP2 . DG A 1 4 ? 5.754 3.658 -6.583 1.00 46.17 ? 4 DG A OP2 1
ATOM 61 O "O5'" . DG A 1 4 ? 5.827 1.110 -6.451 1.00 41.24 ? 4 DG A "O5'" 1
ATOM 62 C "C5'" . DG A 1 4 ? 6.139 0.369 -7.609 1.00 30.04 ? 4 DG A "C5'" 1
ATOM 63 C "C4'" . DG A 1 4 ? 5.478 -0.996 -7.734 1.00 33.15 ? 4 DG A "C4'" 1
ATOM 64 O "O4'" . DG A 1 4 ? 5.846 -1.840 -6.614 1.00 28.17 ? 4 DG A "O4'" 1
ATOM 65 C "C3'" . DG A 1 4 ? 3.946 -1.092 -7.854 1.00 40.96 ? 4 DG A "C3'" 1
ATOM 66 O "O3'" . DG A 1 4 ? 3.442 -2.337 -8.462 1.00 43.09 ? 4 DG A "O3'" 1
ATOM 67 C "C2'" . DG A 1 4 ? 3.641 -1.200 -6.386 1.00 33.61 ? 4 DG A "C2'" 1
ATOM 68 C "C1'" . DG A 1 4 ? 4.632 -2.306 -6.011 1.00 35.78 ? 4 DG A "C1'" 1
ATOM 69 N N9 . DG A 1 4 ? 4.805 -2.519 -4.539 1.00 36.17 ? 4 DG A N9 1
ATOM 70 C C8 . DG A 1 4 ? 4.793 -1.477 -3.627 1.00 34.95 ? 4 DG A C8 1
ATOM 71 N N7 . DG A 1 4 ? 4.953 -1.834 -2.378 1.00 33.41 ? 4 DG A N7 1
ATOM 72 C C5 . DG A 1 4 ? 5.064 -3.204 -2.445 1.00 28.72 ? 4 DG A C5 1
ATOM 73 C C6 . DG A 1 4 ? 5.284 -4.064 -1.351 1.00 37.16 ? 4 DG A C6 1
ATOM 74 O O6 . DG A 1 4 ? 5.399 -3.744 -0.137 1.00 42.16 ? 4 DG A O6 1
ATOM 75 N N1 . DG A 1 4 ? 5.363 -5.393 -1.744 1.00 33.57 ? 4 DG A N1 1
ATOM 76 C C2 . DG A 1 4 ? 5.255 -5.808 -3.038 1.00 33.05 ? 4 DG A C2 1
ATOM 77 N N2 . DG A 1 4 ? 5.375 -7.151 -3.112 1.00 31.11 ? 4 DG A N2 1
ATOM 78 N N3 . DG A 1 4 ? 5.056 -4.981 -4.102 1.00 33.29 ? 4 DG A N3 1
ATOM 79 C C4 . DG A 1 4 ? 4.971 -3.671 -3.739 1.00 30.74 ? 4 DG A C4 1
ATOM 80 P P . DT A 1 5 ? 3.148 -2.600 -10.035 1.00 55.07 ? 5 DT A P 1
ATOM 81 O OP1 . DT A 1 5 ? 4.423 -2.497 -10.800 1.00 50.64 ? 5 DT A OP1 1
ATOM 82 O OP2 . DT A 1 5 ? 1.950 -1.825 -10.505 1.00 44.54 ? 5 DT A OP2 1
ATOM 83 O "O5'" . DT A 1 5 ? 2.806 -4.159 -9.951 1.00 51.46 ? 5 DT A "O5'" 1
ATOM 84 C "C5'" . DT A 1 5 ? 3.778 -5.080 -9.448 1.00 53.63 ? 5 DT A "C5'" 1
ATOM 85 C "C4'" . DT A 1 5 ? 3.153 -6.030 -8.437 1.00 56.07 ? 5 DT A "C4'" 1
ATOM 86 O "O4'" . DT A 1 5 ? 3.068 -5.426 -7.109 1.00 64.25 ? 5 DT A "O4'" 1
ATOM 87 C "C3'" . DT A 1 5 ? 1.721 -6.466 -8.711 1.00 57.50 ? 5 DT A "C3'" 1
ATOM 88 O "O3'" . DT A 1 5 ? 1.500 -7.747 -8.192 1.00 55.71 ? 5 DT A "O3'" 1
ATOM 89 C "C2'" . DT A 1 5 ? 0.902 -5.520 -7.836 1.00 66.11 ? 5 DT A "C2'" 1
ATOM 90 C "C1'" . DT A 1 5 ? 1.762 -5.706 -6.596 1.00 65.72 ? 5 DT A "C1'" 1
ATOM 91 N N1 . DT A 1 5 ? 1.462 -4.899 -5.326 1.00 67.73 ? 5 DT A N1 1
ATOM 92 C C2 . DT A 1 5 ? 1.622 -5.576 -4.117 1.00 68.17 ? 5 DT A C2 1
ATOM 93 O O2 . DT A 1 5 ? 1.848 -6.781 -4.040 1.00 76.92 ? 5 DT A O2 1
ATOM 94 N N3 . DT A 1 5 ? 1.510 -4.795 -2.982 1.00 70.98 ? 5 DT A N3 1
ATOM 95 C C4 . DT A 1 5 ? 1.246 -3.442 -2.951 1.00 64.97 ? 5 DT A C4 1
ATOM 96 O O4 . DT A 1 5 ? 1.185 -2.814 -1.896 1.00 72.96 ? 5 DT A O4 1
ATOM 97 C C5 . DT A 1 5 ? 1.087 -2.803 -4.245 1.00 65.81 ? 5 DT A C5 1
ATOM 98 C C7 . DT A 1 5 ? 0.801 -1.336 -4.301 1.00 73.52 ? 5 DT A C7 1
ATOM 99 C C6 . DT A 1 5 ? 1.202 -3.539 -5.363 1.00 66.78 ? 5 DT A C6 1
ATOM 100 P P . DA A 1 6 ? 0.291 -8.597 -8.825 1.00 58.33 ? 6 DA A P 1
ATOM 101 O OP1 . DA A 1 6 ? 0.907 -9.389 -9.920 1.00 57.20 ? 6 DA A OP1 1
ATOM 102 O OP2 . DA A 1 6 ? -0.825 -7.678 -9.165 1.00 55.51 ? 6 DA A OP2 1
ATOM 103 O "O5'" . DA A 1 6 ? -0.233 -9.611 -7.697 1.00 46.74 ? 6 DA A "O5'" 1
ATOM 104 C "C5'" . DA A 1 6 ? 0.617 -10.283 -6.795 1.00 50.50 ? 6 DA A "C5'" 1
ATOM 105 C "C4'" . DA A 1 6 ? -0.193 -10.568 -5.547 1.00 48.86 ? 6 DA A "C4'" 1
ATOM 106 O "O4'" . DA A 1 6 ? -0.403 -9.345 -4.802 1.00 47.87 ? 6 DA A "O4'" 1
ATOM 107 C "C3'" . DA A 1 6 ? -1.604 -11.045 -5.878 1.00 54.01 ? 6 DA A "C3'" 1
ATOM 108 O "O3'" . DA A 1 6 ? -1.878 -12.257 -5.141 1.00 54.22 ? 6 DA A "O3'" 1
ATOM 109 C "C2'" . DA A 1 6 ? -2.495 -9.827 -5.521 1.00 48.34 ? 6 DA A "C2'" 1
ATOM 110 C "C1'" . DA A 1 6 ? -1.723 -9.377 -4.306 1.00 39.45 ? 6 DA A "C1'" 1
ATOM 111 N N9 . DA A 1 6 ? -1.880 -8.041 -3.803 1.00 36.10 ? 6 DA A N9 1
ATOM 112 C C8 . DA A 1 6 ? -2.109 -6.917 -4.510 1.00 33.34 ? 6 DA A C8 1
ATOM 113 N N7 . DA A 1 6 ? -2.137 -5.854 -3.743 1.00 31.31 ? 6 DA A N7 1
ATOM 114 C C5 . DA A 1 6 ? -1.891 -6.325 -2.484 1.00 20.29 ? 6 DA A C5 1
ATOM 115 C C6 . DA A 1 6 ? -1.813 -5.673 -1.267 1.00 21.87 ? 6 DA A C6 1
ATOM 116 N N6 . DA A 1 6 ? -1.977 -4.349 -1.196 1.00 18.11 ? 6 DA A N6 1
ATOM 117 N N1 . DA A 1 6 ? -1.561 -6.414 -0.159 1.00 23.99 ? 6 DA A N1 1
ATOM 118 C C2 . DA A 1 6 ? -1.409 -7.744 -0.294 1.00 27.53 ? 6 DA A C2 1
ATOM 119 N N3 . DA A 1 6 ? -1.482 -8.455 -1.428 1.00 28.52 ? 6 DA A N3 1
ATOM 120 C C4 . DA A 1 6 ? -1.721 -7.669 -2.491 1.00 26.15 ? 6 DA A C4 1
ATOM 121 P P . DC A 1 7 ? -3.404 -12.724 -5.034 1.00 57.86 ? 7 DC A P 1
ATOM 122 O OP1 . DC A 1 7 ? -3.751 -13.534 -6.223 1.00 51.72 ? 7 DC A OP1 1
ATOM 123 O OP2 . DC A 1 7 ? -4.216 -11.515 -4.734 1.00 60.18 ? 7 DC A OP2 1
ATOM 124 O "O5'" . DC A 1 7 ? -3.453 -13.599 -3.700 1.00 53.96 ? 7 DC A "O5'" 1
ATOM 125 C "C5'" . DC A 1 7 ? -3.205 -12.932 -2.448 1.00 56.55 ? 7 DC A "C5'" 1
ATOM 126 C "C4'" . DC A 1 7 ? -4.388 -12.551 -1.557 1.00 52.85 ? 7 DC A "C4'" 1
ATOM 127 O "O4'" . DC A 1 7 ? -4.015 -11.320 -0.867 1.00 50.81 ? 7 DC A "O4'" 1
ATOM 128 C "C3'" . DC A 1 7 ? -5.739 -12.225 -2.196 1.00 54.78 ? 7 DC A "C3'" 1
ATOM 129 O "O3'" . DC A 1 7 ? -6.634 -13.344 -2.381 1.00 60.10 ? 7 DC A "O3'" 1
ATOM 130 C "C2'" . DC A 1 7 ? -6.350 -11.200 -1.254 1.00 47.18 ? 7 DC A "C2'" 1
ATOM 131 C "C1'" . DC A 1 7 ? -5.171 -10.593 -0.500 1.00 41.20 ? 7 DC A "C1'" 1
ATOM 132 N N1 . DC A 1 7 ? -5.035 -9.168 -0.830 1.00 28.74 ? 7 DC A N1 1
ATOM 133 C C2 . DC A 1 7 ? -4.959 -8.210 0.209 1.00 30.01 ? 7 DC A C2 1
ATOM 134 O O2 . DC A 1 7 ? -4.993 -8.553 1.402 1.00 19.27 ? 7 DC A O2 1
ATOM 135 N N3 . DC A 1 7 ? -4.856 -6.885 -0.104 1.00 24.18 ? 7 DC A N3 1
ATOM 136 C C4 . DC A 1 7 ? -4.847 -6.540 -1.401 1.00 33.54 ? 7 DC A C4 1
ATOM 137 N N4 . DC A 1 7 ? -4.750 -5.233 -1.668 1.00 26.99 ? 7 DC A N4 1
ATOM 138 C C5 . DC A 1 7 ? -4.932 -7.508 -2.475 1.00 29.84 ? 7 DC A C5 1
ATOM 139 C C6 . DC A 1 7 ? -5.019 -8.797 -2.139 1.00 31.36 ? 7 DC A C6 1
ATOM 140 P P . DC A 1 8 ? -7.168 -14.494 -1.376 1.00 63.13 ? 8 DC A P 1
ATOM 141 O OP1 . DC A 1 8 ? -6.430 -15.691 -1.876 1.00 61.57 ? 8 DC A OP1 1
ATOM 142 O OP2 . DC A 1 8 ? -8.657 -14.499 -1.511 1.00 61.17 ? 8 DC A OP2 1
ATOM 143 O "O5'" . DC A 1 8 ? -6.824 -14.209 0.195 1.00 60.17 ? 8 DC A "O5'" 1
ATOM 144 C "C5'" . DC A 1 8 ? -6.350 -13.003 0.850 1.00 56.27 ? 8 DC A "C5'" 1
ATOM 145 C "C4'" . DC A 1 8 ? -6.807 -12.795 2.298 1.00 62.74 ? 8 DC A "C4'" 1
ATOM 146 O "O4'" . DC A 1 8 ? -6.923 -11.384 2.680 1.00 58.52 ? 8 DC A "O4'" 1
ATOM 147 C "C3'" . DC A 1 8 ? -8.196 -13.285 2.626 1.00 60.82 ? 8 DC A "C3'" 1
ATOM 148 O "O3'" . DC A 1 8 ? -8.372 -13.238 4.038 1.00 61.79 ? 8 DC A "O3'" 1
ATOM 149 C "C2'" . DC A 1 8 ? -8.983 -12.150 2.001 1.00 57.70 ? 8 DC A "C2'" 1
ATOM 150 C "C1'" . DC A 1 8 ? -8.289 -10.988 2.710 1.00 55.23 ? 8 DC A "C1'" 1
ATOM 151 N N1 . DC A 1 8 ? -8.446 -9.769 1.922 1.00 48.95 ? 8 DC A N1 1
ATOM 152 C C2 . DC A 1 8 ? -8.621 -8.486 2.468 1.00 47.25 ? 8 DC A C2 1
ATOM 153 O O2 . DC A 1 8 ? -8.655 -8.309 3.693 1.00 47.17 ? 8 DC A O2 1
ATOM 154 N N3 . DC A 1 8 ? -8.745 -7.452 1.592 1.00 42.96 ? 8 DC A N3 1
ATOM 155 C C4 . DC A 1 8 ? -8.703 -7.672 0.259 1.00 42.57 ? 8 DC A C4 1
ATOM 156 N N4 . DC A 1 8 ? -8.827 -6.674 -0.621 1.00 39.27 ? 8 DC A N4 1
ATOM 157 C C5 . DC A 1 8 ? -8.526 -8.964 -0.279 1.00 44.26 ? 8 DC A C5 1
ATOM 158 C C6 . DC A 1 8 ? -8.413 -9.959 0.582 1.00 43.62 ? 8 DC A C6 1
ATOM 159 P P . DG A 1 9 ? -9.877 -13.325 4.591 1.00 58.43 ? 9 DG A P 1
ATOM 160 O OP1 . DG A 1 9 ? -10.279 -14.745 4.765 1.00 59.51 ? 9 DG A OP1 1
ATOM 161 O OP2 . DG A 1 9 ? -10.749 -12.518 3.710 1.00 56.49 ? 9 DG A OP2 1
ATOM 162 O "O5'" . DG A 1 9 ? -9.662 -12.634 6.015 1.00 51.56 ? 9 DG A "O5'" 1
ATOM 163 C "C5'" . DG A 1 9 ? -10.750 -12.408 6.852 1.00 43.62 ? 9 DG A "C5'" 1
ATOM 164 C "C4'" . DG A 1 9 ? -11.683 -11.355 6.271 1.00 47.52 ? 9 DG A "C4'" 1
ATOM 165 O "O4'" . DG A 1 9 ? -11.251 -10.606 5.062 1.00 47.72 ? 9 DG A "O4'" 1
ATOM 166 C "C3'" . DG A 1 9 ? -13.032 -11.968 5.923 1.00 47.59 ? 9 DG A "C3'" 1
ATOM 167 O "O3'" . DG A 1 9 ? -13.813 -11.630 7.021 1.00 49.32 ? 9 DG A "O3'" 1
ATOM 168 C "C2'" . DG A 1 9 ? -13.465 -11.297 4.599 1.00 47.35 ? 9 DG A "C2'" 1
ATOM 169 C "C1'" . DG A 1 9 ? -12.448 -10.149 4.429 1.00 37.17 ? 9 DG A "C1'" 1
ATOM 170 N N9 . DG A 1 9 ? -12.342 -9.556 3.024 1.00 28.74 ? 9 DG A N9 1
ATOM 171 C C8 . DG A 1 9 ? -12.423 -10.254 1.812 1.00 23.05 ? 9 DG A C8 1
ATOM 172 N N7 . DG A 1 9 ? -12.334 -9.496 0.753 1.00 18.18 ? 9 DG A N7 1
ATOM 173 C C5 . DG A 1 9 ? -12.177 -8.190 1.326 1.00 21.89 ? 9 DG A C5 1
ATOM 174 C C6 . DG A 1 9 ? -12.020 -6.900 0.724 1.00 21.52 ? 9 DG A C6 1
ATOM 175 O O6 . DG A 1 9 ? -11.969 -6.588 -0.470 1.00 24.66 ? 9 DG A O6 1
ATOM 176 N N1 . DG A 1 9 ? -11.913 -5.847 1.623 1.00 14.31 ? 9 DG A N1 1
ATOM 177 C C2 . DG A 1 9 ? -11.936 -5.942 2.995 1.00 19.61 ? 9 DG A C2 1
ATOM 178 N N2 . DG A 1 9 ? -11.806 -4.756 3.682 1.00 17.21 ? 9 DG A N2 1
ATOM 179 N N3 . DG A 1 9 ? -12.092 -7.123 3.592 1.00 17.60 ? 9 DG A N3 1
ATOM 180 C C4 . DG A 1 9 ? -12.195 -8.191 2.714 1.00 21.15 ? 9 DG A C4 1
ATOM 181 P P . DG A 1 10 ? -14.415 -10.142 7.201 1.00 56.56 ? 10 DG A P 1
ATOM 182 O OP1 . DG A 1 10 ? -14.329 -9.817 8.646 1.00 53.96 ? 10 DG A OP1 1
ATOM 183 O OP2 . DG A 1 10 ? -15.736 -10.297 6.534 1.00 56.46 ? 10 DG A OP2 1
ATOM 184 O "O5'" . DG A 1 10 ? -13.571 -8.999 6.424 1.00 50.25 ? 10 DG A "O5'" 1
ATOM 185 C "C5'" . DG A 1 10 ? -13.040 -7.827 7.153 1.00 56.61 ? 10 DG A "C5'" 1
ATOM 186 C "C4'" . DG A 1 10 ? -13.966 -6.775 7.777 1.00 51.96 ? 10 DG A "C4'" 1
ATOM 187 O "O4'" . DG A 1 10 ? -14.460 -5.851 6.763 1.00 46.55 ? 10 DG A "O4'" 1
ATOM 188 C "C3'" . DG A 1 10 ? -15.203 -7.299 8.499 1.00 48.68 ? 10 DG A "C3'" 1
ATOM 189 O "O3'" . DG A 1 10 ? -15.384 -6.670 9.805 1.00 50.40 ? 10 DG A "O3'" 1
ATOM 190 C "C2'" . DG A 1 10 ? -16.286 -7.276 7.414 1.00 43.52 ? 10 DG A "C2'" 1
ATOM 191 C "C1'" . DG A 1 10 ? -15.813 -6.163 6.448 1.00 42.32 ? 10 DG A "C1'" 1
ATOM 192 N N9 . DG A 1 10 ? -15.538 -6.960 4.965 1.00 37.31 ? 10 DG A N9 1
ATOM 193 C C8 . DG A 1 10 ? -15.512 -8.305 4.602 1.00 41.45 ? 10 DG A C8 1
ATOM 194 N N7 . DG A 1 10 ? -15.356 -8.595 3.327 1.00 33.70 ? 10 DG A N7 1
ATOM 195 C C5 . DG A 1 10 ? -15.276 -7.335 2.782 1.00 28.98 ? 10 DG A C5 1
ATOM 196 C C6 . DG A 1 10 ? -15.107 -6.984 1.440 1.00 30.93 ? 10 DG A C6 1
ATOM 197 O O6 . DG A 1 10 ? -14.982 -7.781 0.506 1.00 29.84 ? 10 DG A O6 1
ATOM 198 N N1 . DG A 1 10 ? -15.075 -5.594 1.246 1.00 32.12 ? 10 DG A N1 1
ATOM 199 C C2 . DG A 1 10 ? -15.191 -4.649 2.284 1.00 36.74 ? 10 DG A C2 1
ATOM 200 N N2 . DG A 1 10 ? -15.156 -3.307 2.031 1.00 26.02 ? 10 DG A N2 1
ATOM 201 N N3 . DG A 1 10 ? -15.347 -5.010 3.556 1.00 33.19 ? 10 DG A N3 1
ATOM 202 C C4 . DG A 1 10 ? -15.389 -6.346 3.737 1.00 34.91 ? 10 DG A C4 1
ATOM 203 O "O5'" . DC B 1 1 ? -17.685 -2.305 -6.229 1.00 42.26 ? 1 DC B "O5'" 1
ATOM 204 C "C5'" . DC B 1 1 ? -17.817 -1.501 -4.982 1.00 41.25 ? 1 DC B "C5'" 1
ATOM 205 C "C4'" . DC B 1 1 ? -16.795 -0.394 -4.599 1.00 45.45 ? 1 DC B "C4'" 1
ATOM 206 O "O4'" . DC B 1 1 ? -16.135 -0.740 -3.345 1.00 43.95 ? 1 DC B "O4'" 1
ATOM 207 C "C3'" . DC B 1 1 ? -15.577 0.002 -5.466 1.00 49.29 ? 1 DC B "C3'" 1
ATOM 208 O "O3'" . DC B 1 1 ? -15.139 1.352 -5.136 1.00 44.94 ? 1 DC B "O3'" 1
ATOM 209 C "C2'" . DC B 1 1 ? -14.498 -1.017 -5.091 1.00 35.47 ? 1 DC B "C2'" 1
ATOM 210 C "C1'" . DC B 1 1 ? -14.755 -1.108 -3.584 1.00 44.67 ? 1 DC B "C1'" 1
ATOM 211 N N1 . DC B 1 1 ? -14.588 -2.472 -3.068 1.00 39.60 ? 1 DC B N1 1
ATOM 212 C C2 . DC B 1 1 ? -14.562 -2.762 -1.692 1.00 45.13 ? 1 DC B C2 1
ATOM 213 O O2 . DC B 1 1 ? -14.623 -1.830 -0.865 1.00 46.82 ? 1 DC B O2 1
ATOM 214 N N3 . DC B 1 1 ? -14.477 -4.073 -1.309 1.00 41.03 ? 1 DC B N3 1
ATOM 215 C C4 . DC B 1 1 ? -14.415 -5.033 -2.246 1.00 43.90 ? 1 DC B C4 1
ATOM 216 N N4 . DC B 1 1 ? -14.335 -6.311 -1.825 1.00 43.35 ? 1 DC B N4 1
ATOM 217 C C5 . DC B 1 1 ? -14.442 -4.744 -3.654 1.00 41.88 ? 1 DC B C5 1
ATOM 218 C C6 . DC B 1 1 ? -14.536 -3.459 -4.007 1.00 40.73 ? 1 DC B C6 1
ATOM 219 P P . DC B 1 2 ? -13.577 1.711 -4.985 1.00 50.83 ? 2 DC B P 1
ATOM 220 O OP1 . DC B 1 2 ? -13.329 3.185 -5.058 1.00 47.58 ? 2 DC B OP1 1
ATOM 221 O OP2 . DC B 1 2 ? -12.931 0.921 -6.047 1.00 51.24 ? 2 DC B OP2 1
ATOM 222 O "O5'" . DC B 1 2 ? -13.168 1.108 -3.520 1.00 50.18 ? 2 DC B "O5'" 1
ATOM 223 C "C5'" . DC B 1 2 ? -13.738 1.451 -2.173 1.00 46.69 ? 2 DC B "C5'" 1
ATOM 224 C "C4'" . DC B 1 2 ? -12.770 1.998 -1.099 1.00 45.33 ? 2 DC B "C4'" 1
ATOM 225 O "O4'" . DC B 1 2 ? -12.584 1.076 0.016 1.00 45.86 ? 2 DC B "O4'" 1
ATOM 226 C "C3'" . DC B 1 2 ? -11.364 2.355 -1.562 1.00 48.77 ? 2 DC B "C3'" 1
ATOM 227 O "O3'" . DC B 1 2 ? -11.075 3.689 -1.255 1.00 47.44 ? 2 DC B "O3'" 1
ATOM 228 C "C2'" . DC B 1 2 ? -10.416 1.442 -0.776 1.00 39.82 ? 2 DC B "C2'" 1
ATOM 229 C "C1'" . DC B 1 2 ? -11.219 0.785 0.333 1.00 35.49 ? 2 DC B "C1'" 1
ATOM 230 N N1 . DC B 1 2 ? -11.093 -0.659 0.116 1.00 33.78 ? 2 DC B N1 1
ATOM 231 C C2 . DC B 1 2 ? -10.970 -1.765 1.010 1.00 37.14 ? 2 DC B C2 1
ATOM 232 O O2 . DC B 1 2 ? -10.935 -1.664 2.258 1.00 42.89 ? 2 DC B O2 1
ATOM 233 N N3 . DC B 1 2 ? -10.896 -2.993 0.430 1.00 38.24 ? 2 DC B N3 1
ATOM 234 C C4 . DC B 1 2 ? -10.949 -3.109 -0.897 1.00 32.76 ? 2 DC B C4 1
ATOM 235 N N4 . DC B 1 2 ? -10.876 -4.326 -1.437 1.00 36.28 ? 2 DC B N4 1
ATOM 236 C C5 . DC B 1 2 ? -11.079 -2.003 -1.776 1.00 36.43 ? 2 DC B C5 1
ATOM 237 C C6 . DC B 1 2 ? -11.145 -0.827 -1.214 1.00 30.77 ? 2 DC B C6 1
ATOM 238 P P . DG B 1 3 ? -9.704 3.928 -0.457 1.00 53.57 ? 3 DG B P 1
ATOM 239 O OP1 . DG B 1 3 ? -9.582 5.401 -0.360 1.00 54.08 ? 3 DG B OP1 1
ATOM 240 O OP2 . DG B 1 3 ? -8.627 3.229 -1.199 1.00 52.64 ? 3 DG B OP2 1
ATOM 241 O "O5'" . DG B 1 3 ? -9.891 3.229 1.018 1.00 48.80 ? 3 DG B "O5'" 1
ATOM 242 C "C5'" . DG B 1 3 ? -8.966 3.521 2.116 1.00 52.65 ? 3 DG B "C5'" 1
ATOM 243 C "C4'" . DG B 1 3 ? -8.762 2.532 3.289 1.00 45.62 ? 3 DG B "C4'" 1
ATOM 244 O "O4'" . DG B 1 3 ? -8.966 1.134 2.911 1.00 42.35 ? 3 DG B "O4'" 1
ATOM 245 C "C3'" . DG B 1 3 ? -7.337 2.589 3.890 1.00 42.41 ? 3 DG B "C3'" 1
ATOM 246 O "O3'" . DG B 1 3 ? -7.313 2.631 5.366 1.00 48.86 ? 3 DG B "O3'" 1
ATOM 247 C "C2'" . DG B 1 3 ? -6.707 1.324 3.286 1.00 46.10 ? 3 DG B "C2'" 1
ATOM 248 C "C1'" . DG B 1 3 ? -7.861 0.323 3.293 1.00 31.74 ? 3 DG B "C1'" 1
ATOM 249 N N9 . DG B 1 3 ? -7.866 -0.708 2.274 1.00 24.82 ? 3 DG B N9 1
ATOM 250 C C8 . DG B 1 3 ? -7.897 -0.449 0.931 1.00 28.70 ? 3 DG B C8 1
ATOM 251 N N7 . DG B 1 3 ? -7.950 -1.510 0.166 1.00 26.02 ? 3 DG B N7 1
ATOM 252 C C5 . DG B 1 3 ? -7.951 -2.559 1.069 1.00 21.18 ? 3 DG B C5 1
ATOM 253 C C6 . DG B 1 3 ? -8.009 -3.953 0.798 1.00 21.67 ? 3 DG B C6 1
ATOM 254 O O6 . DG B 1 3 ? -8.049 -4.456 -0.353 1.00 20.39 ? 3 DG B O6 1
ATOM 255 N N1 . DG B 1 3 ? -7.972 -4.734 1.972 1.00 13.34 ? 3 DG B N1 1
ATOM 256 C C2 . DG B 1 3 ? -7.934 -4.172 3.235 1.00 20.27 ? 3 DG B C2 1
ATOM 257 N N2 . DG B 1 3 ? -7.947 -5.039 4.270 1.00 24.14 ? 3 DG B N2 1
ATOM 258 N N3 . DG B 1 3 ? -7.903 -2.843 3.493 1.00 23.35 ? 3 DG B N3 1
ATOM 259 C C4 . DG B 1 3 ? -7.916 -2.083 2.370 1.00 22.41 ? 3 DG B C4 1
ATOM 260 P P . DG B 1 4 ? -5.991 2.833 6.307 1.00 55.51 ? 4 DG B P 1
ATOM 261 O OP1 . DG B 1 4 ? -6.393 3.796 7.382 1.00 48.67 ? 4 DG B OP1 1
ATOM 262 O OP2 . DG B 1 4 ? -4.895 3.182 5.359 1.00 54.07 ? 4 DG B OP2 1
ATOM 263 O "O5'" . DG B 1 4 ? -5.613 1.406 7.008 1.00 45.38 ? 4 DG B "O5'" 1
ATOM 264 C "C5'" . DG B 1 4 ? -6.608 0.388 7.203 1.00 33.63 ? 4 DG B "C5'" 1
ATOM 265 C "C4'" . DG B 1 4 ? -6.106 -1.014 7.515 1.00 27.97 ? 4 DG B "C4'" 1
ATOM 266 O "O4'" . DG B 1 4 ? -6.208 -1.834 6.327 1.00 31.58 ? 4 DG B "O4'" 1
ATOM 267 C "C3'" . DG B 1 4 ? -4.640 -1.127 7.900 1.00 36.20 ? 4 DG B "C3'" 1
ATOM 268 O "O3'" . DG B 1 4 ? -4.309 -2.197 8.804 1.00 29.77 ? 4 DG B "O3'" 1
ATOM 269 C "C2'" . DG B 1 4 ? -3.932 -1.363 6.564 1.00 30.59 ? 4 DG B "C2'" 1
ATOM 270 C "C1'" . DG B 1 4 ? -4.912 -2.347 5.954 1.00 24.16 ? 4 DG B "C1'" 1
ATOM 271 N N9 . DG B 1 4 ? -4.847 -2.431 4.491 1.00 14.03 ? 4 DG B N9 1
ATOM 272 C C8 . DG B 1 4 ? -4.825 -1.340 3.649 1.00 11.73 ? 4 DG B C8 1
ATOM 273 N N7 . DG B 1 4 ? -4.808 -1.664 2.398 1.00 7.83 ? 4 DG B N7 1
ATOM 274 C C5 . DG B 1 4 ? -4.803 -3.039 2.404 1.00 2.00 ? 4 DG B C5 1
ATOM 275 C C6 . DG B 1 4 ? -4.790 -3.893 1.287 1.00 10.21 ? 4 DG B C6 1
ATOM 276 O O6 . DG B 1 4 ? -4.779 -3.495 0.084 1.00 18.40 ? 4 DG B O6 1
ATOM 277 N N1 . DG B 1 4 ? -4.791 -5.265 1.606 1.00 2.00 ? 4 DG B N1 1
ATOM 278 C C2 . DG B 1 4 ? -4.799 -5.690 2.910 1.00 2.00 ? 4 DG B C2 1
ATOM 279 N N2 . DG B 1 4 ? -4.799 -7.068 3.019 1.00 2.00 ? 4 DG B N2 1
ATOM 280 N N3 . DG B 1 4 ? -4.819 -4.805 3.960 1.00 2.00 ? 4 DG B N3 1
ATOM 281 C C4 . DG B 1 4 ? -4.821 -3.530 3.643 1.00 2.00 ? 4 DG B C4 1
ATOM 282 P P . DT B 1 5 ? -2.754 -2.131 9.206 1.00 37.35 ? 5 DT B P 1
ATOM 283 O OP1 . DT B 1 5 ? -2.576 -2.254 10.668 1.00 33.18 ? 5 DT B OP1 1
ATOM 284 O OP2 . DT B 1 5 ? -2.062 -0.928 8.612 1.00 32.30 ? 5 DT B OP2 1
ATOM 285 O "O5'" . DT B 1 5 ? -2.389 -3.493 8.463 1.00 26.30 ? 5 DT B "O5'" 1
ATOM 286 C "C5'" . DT B 1 5 ? -2.699 -4.699 9.138 1.00 27.23 ? 5 DT B "C5'" 1
ATOM 287 C "C4'" . DT B 1 5 ? -3.026 -5.647 8.048 1.00 24.03 ? 5 DT B "C4'" 1
ATOM 288 O "O4'" . DT B 1 5 ? -2.494 -4.920 6.905 1.00 28.62 ? 5 DT B "O4'" 1
ATOM 289 C "C3'" . DT B 1 5 ? -2.147 -6.871 7.852 1.00 24.67 ? 5 DT B "C3'" 1
ATOM 290 O "O3'" . DT B 1 5 ? -2.198 -7.893 8.699 1.00 20.15 ? 5 DT B "O3'" 1
ATOM 291 C "C2'" . DT B 1 5 ? -2.246 -7.293 6.389 1.00 27.76 ? 5 DT B "C2'" 1
ATOM 292 C "C1'" . DT B 1 5 ? -2.552 -5.886 5.827 1.00 32.48 ? 5 DT B "C1'" 1
ATOM 293 N N1 . DT B 1 5 ? -1.964 -5.412 4.473 1.00 21.10 ? 5 DT B N1 1
ATOM 294 C C2 . DT B 1 5 ? -1.649 -6.267 3.410 1.00 26.96 ? 5 DT B C2 1
ATOM 295 O O2 . DT B 1 5 ? -1.700 -7.497 3.374 1.00 23.55 ? 5 DT B O2 1
ATOM 296 N N3 . DT B 1 5 ? -1.227 -5.588 2.305 1.00 20.70 ? 5 DT B N3 1
ATOM 297 C C4 . DT B 1 5 ? -1.096 -4.224 2.152 1.00 24.52 ? 5 DT B C4 1
ATOM 298 O O4 . DT B 1 5 ? -0.697 -3.737 1.114 1.00 26.10 ? 5 DT B O4 1
ATOM 299 C C5 . DT B 1 5 ? -1.430 -3.420 3.263 1.00 20.89 ? 5 DT B C5 1
ATOM 300 C C7 . DT B 1 5 ? -1.301 -1.934 3.205 1.00 22.29 ? 5 DT B C7 1
ATOM 301 C C6 . DT B 1 5 ? -1.854 -4.047 4.344 1.00 24.84 ? 5 DT B C6 1
ATOM 302 P P . DA B 1 6 ? -0.607 -7.952 9.080 1.00 37.23 ? 6 DA B P 1
ATOM 303 O OP1 . DA B 1 6 ? -0.610 -8.313 10.519 1.00 35.04 ? 6 DA B OP1 1
ATOM 304 O OP2 . DA B 1 6 ? 0.149 -6.678 8.764 1.00 33.89 ? 6 DA B OP2 1
ATOM 305 O "O5'" . DA B 1 6 ? 0.113 -8.962 8.034 1.00 29.37 ? 6 DA B "O5'" 1
ATOM 306 C "C5'" . DA B 1 6 ? -0.125 -10.331 7.800 1.00 31.66 ? 6 DA B "C5'" 1
ATOM 307 C "C4'" . DA B 1 6 ? 0.379 -10.692 6.414 1.00 31.79 ? 6 DA B "C4'" 1
ATOM 308 O "O4'" . DA B 1 6 ? 0.407 -9.510 5.581 1.00 36.69 ? 6 DA B "O4'" 1
ATOM 309 C "C3'" . DA B 1 6 ? 1.819 -11.173 6.303 1.00 45.86 ? 6 DA B "C3'" 1
ATOM 310 O "O3'" . DA B 1 6 ? 1.806 -12.613 6.249 1.00 53.44 ? 6 DA B "O3'" 1
ATOM 311 C "C2'" . DA B 1 6 ? 2.427 -10.497 5.034 1.00 39.29 ? 6 DA B "C2'" 1
ATOM 312 C "C1'" . DA B 1 6 ? 1.262 -9.728 4.450 1.00 31.25 ? 6 DA B "C1'" 1
ATOM 313 N N9 . DA B 1 6 ? 1.493 -8.411 3.833 1.00 29.08 ? 6 DA B N9 1
ATOM 314 C C8 . DA B 1 6 ? 1.439 -7.221 4.508 1.00 22.73 ? 6 DA B C8 1
ATOM 315 N N7 . DA B 1 6 ? 1.588 -6.158 3.760 1.00 21.87 ? 6 DA B N7 1
ATOM 316 C C5 . DA B 1 6 ? 1.718 -6.668 2.488 1.00 15.64 ? 6 DA B C5 1
ATOM 317 C C6 . DA B 1 6 ? 1.904 -6.000 1.283 1.00 13.32 ? 6 DA B C6 1
ATOM 318 N N6 . DA B 1 6 ? 1.998 -4.666 1.194 1.00 12.78 ? 6 DA B N6 1
ATOM 319 N N1 . DA B 1 6 ? 1.978 -6.767 0.184 1.00 17.71 ? 6 DA B N1 1
ATOM 320 C C2 . DA B 1 6 ? 1.893 -8.113 0.285 1.00 18.55 ? 6 DA B C2 1
ATOM 321 N N3 . DA B 1 6 ? 1.736 -8.857 1.388 1.00 24.07 ? 6 DA B N3 1
ATOM 322 C C4 . DA B 1 6 ? 1.633 -8.062 2.484 1.00 22.15 ? 6 DA B C4 1
ATOM 323 P P . DC B 1 7 ? 3.165 -13.490 6.181 1.00 60.07 ? 7 DC B P 1
ATOM 324 O OP1 . DC B 1 7 ? 3.242 -14.309 7.417 1.00 52.08 ? 7 DC B OP1 1
ATOM 325 O OP2 . DC B 1 7 ? 4.321 -12.646 5.790 1.00 55.02 ? 7 DC B OP2 1
ATOM 326 O "O5'" . DC B 1 7 ? 2.851 -14.395 4.896 1.00 55.22 ? 7 DC B "O5'" 1
ATOM 327 C "C5'" . DC B 1 7 ? 2.584 -13.783 3.659 1.00 49.85 ? 7 DC B "C5'" 1
ATOM 328 C "C4'" . DC B 1 7 ? 3.838 -13.508 2.841 1.00 59.22 ? 7 DC B "C4'" 1
ATOM 329 O "O4'" . DC B 1 7 ? 3.953 -12.080 2.637 1.00 57.64 ? 7 DC B "O4'" 1
ATOM 330 C "C3'" . DC B 1 7 ? 5.243 -13.924 3.293 1.00 61.47 ? 7 DC B "C3'" 1
ATOM 331 O "O3'" . DC B 1 7 ? 5.608 -15.000 2.457 1.00 60.62 ? 7 DC B "O3'" 1
ATOM 332 C "C2'" . DC B 1 7 ? 6.094 -12.674 3.017 1.00 53.12 ? 7 DC B "C2'" 1
ATOM 333 C "C1'" . DC B 1 7 ? 5.216 -11.960 1.985 1.00 63.53 ? 7 DC B "C1'" 1
ATOM 334 N N1 . DC B 1 7 ? 5.469 -10.414 1.735 1.00 50.87 ? 7 DC B N1 1
ATOM 335 C C2 . DC B 1 7 ? 5.811 -9.682 0.519 1.00 57.17 ? 7 DC B C2 1
ATOM 336 O O2 . DC B 1 7 ? 6.097 -10.174 -0.592 1.00 50.10 ? 7 DC B O2 1
ATOM 337 N N3 . DC B 1 7 ? 5.760 -8.294 0.639 1.00 59.02 ? 7 DC B N3 1
ATOM 338 C C4 . DC B 1 7 ? 5.404 -7.688 1.812 1.00 60.39 ? 7 DC B C4 1
ATOM 339 N N4 . DC B 1 7 ? 5.392 -6.331 1.863 1.00 51.35 ? 7 DC B N4 1
ATOM 340 C C5 . DC B 1 7 ? 5.003 -8.425 3.011 1.00 52.45 ? 7 DC B C5 1
ATOM 341 C C6 . DC B 1 7 ? 5.039 -9.756 2.891 1.00 62.31 ? 7 DC B C6 1
ATOM 342 P P . DC B 1 8 ? 7.107 -15.507 2.172 1.00 67.97 ? 8 DC B P 1
ATOM 343 O OP1 . DC B 1 8 ? 6.953 -16.964 2.383 1.00 69.58 ? 8 DC B OP1 1
ATOM 344 O OP2 . DC B 1 8 ? 8.126 -14.799 3.010 1.00 68.46 ? 8 DC B OP2 1
ATOM 345 O "O5'" . DC B 1 8 ? 7.365 -15.187 0.580 1.00 66.64 ? 8 DC B "O5'" 1
ATOM 346 C "C5'" . DC B 1 8 ? 6.837 -14.017 -0.193 1.00 61.14 ? 8 DC B "C5'" 1
ATOM 347 C "C4'" . DC B 1 8 ? 7.309 -13.768 -1.655 1.00 57.53 ? 8 DC B "C4'" 1
ATOM 348 O "O4'" . DC B 1 8 ? 7.408 -12.338 -1.942 1.00 58.13 ? 8 DC B "O4'" 1
ATOM 349 C "C3'" . DC B 1 8 ? 8.689 -14.231 -2.137 1.00 61.72 ? 8 DC B "C3'" 1
ATOM 350 O "O3'" . DC B 1 8 ? 8.815 -14.082 -3.570 1.00 65.45 ? 8 DC B "O3'" 1
ATOM 351 C "C2'" . DC B 1 8 ? 9.548 -13.153 -1.520 1.00 59.55 ? 8 DC B "C2'" 1
ATOM 352 C "C1'" . DC B 1 8 ? 8.790 -11.955 -2.094 1.00 61.92 ? 8 DC B "C1'" 1
ATOM 353 N N1 . DC B 1 8 ? 8.991 -10.687 -1.327 1.00 54.88 ? 8 DC B N1 1
ATOM 354 C C2 . DC B 1 8 ? 8.904 -9.384 -1.896 1.00 52.11 ? 8 DC B C2 1
ATOM 355 O O2 . DC B 1 8 ? 8.709 -9.201 -3.118 1.00 47.81 ? 8 DC B O2 1
ATOM 356 N N3 . DC B 1 8 ? 9.056 -8.323 -1.067 1.00 45.60 ? 8 DC B N3 1
ATOM 357 C C4 . DC B 1 8 ? 9.262 -8.552 0.221 1.00 48.42 ? 8 DC B C4 1
ATOM 358 N N4 . DC B 1 8 ? 9.380 -7.466 0.973 1.00 50.75 ? 8 DC B N4 1
ATOM 359 C C5 . DC B 1 8 ? 9.364 -9.844 0.827 1.00 44.43 ? 8 DC B C5 1
ATOM 360 C C6 . DC B 1 8 ? 9.210 -10.875 0.007 1.00 50.03 ? 8 DC B C6 1
ATOM 361 P P . DG B 1 9 ? 10.004 -14.806 -4.383 1.00 69.05 ? 9 DG B P 1
ATOM 362 O OP1 . DG B 1 9 ? 9.604 -16.242 -4.545 1.00 64.13 ? 9 DG B OP1 1
ATOM 363 O OP2 . DG B 1 9 ? 11.246 -14.428 -3.664 1.00 65.61 ? 9 DG B OP2 1
ATOM 364 O "O5'" . DG B 1 9 ? 10.073 -14.179 -5.870 1.00 61.70 ? 9 DG B "O5'" 1
ATOM 365 C "C5'" . DG B 1 9 ? 9.752 -12.825 -6.200 1.00 58.39 ? 9 DG B "C5'" 1
ATOM 366 C "C4'" . DG B 1 9 ? 10.894 -11.882 -5.872 1.00 51.18 ? 9 DG B "C4'" 1
ATOM 367 O "O4'" . DG B 1 9 ? 10.922 -11.716 -4.427 1.00 46.07 ? 9 DG B "O4'" 1
ATOM 368 C "C3'" . DG B 1 9 ? 12.292 -12.376 -6.278 1.00 52.06 ? 9 DG B "C3'" 1
ATOM 369 O "O3'" . DG B 1 9 ? 13.086 -11.467 -7.152 1.00 62.12 ? 9 DG B "O3'" 1
ATOM 370 C "C2'" . DG B 1 9 ? 12.984 -12.611 -4.920 1.00 46.07 ? 9 DG B "C2'" 1
ATOM 371 C "C1'" . DG B 1 9 ? 12.283 -11.500 -4.155 1.00 36.77 ? 9 DG B "C1'" 1
ATOM 372 N N9 . DG B 1 9 ? 12.493 -11.196 -2.729 1.00 26.03 ? 9 DG B N9 1
ATOM 373 C C8 . DG B 1 9 ? 12.728 -11.955 -1.571 1.00 18.31 ? 9 DG B C8 1
ATOM 374 N N7 . DG B 1 9 ? 12.836 -11.284 -0.429 1.00 9.00 ? 9 DG B N7 1
ATOM 375 C C5 . DG B 1 9 ? 12.664 -9.997 -0.935 1.00 16.21 ? 9 DG B C5 1
ATOM 376 C C6 . DG B 1 9 ? 12.699 -8.782 -0.294 1.00 16.25 ? 9 DG B C6 1
ATOM 377 O O6 . DG B 1 9 ? 12.895 -8.705 0.900 1.00 23.94 ? 9 DG B O6 1
ATOM 378 N N1 . DG B 1 9 ? 12.487 -7.653 -1.079 1.00 11.89 ? 9 DG B N1 1
ATOM 379 C C2 . DG B 1 9 ? 12.279 -7.721 -2.449 1.00 21.61 ? 9 DG B C2 1
ATOM 380 N N2 . DG B 1 9 ? 12.077 -6.608 -3.220 1.00 23.96 ? 9 DG B N2 1
ATOM 381 N N3 . DG B 1 9 ? 12.277 -8.860 -3.103 1.00 17.90 ? 9 DG B N3 1
ATOM 382 C C4 . DG B 1 9 ? 12.460 -9.917 -2.285 1.00 20.07 ? 9 DG B C4 1
ATOM 383 P P . DG B 1 10 ? 12.629 -10.219 -8.125 1.00 70.08 ? 10 DG B P 1
ATOM 384 O OP1 . DG B 1 10 ? 11.653 -9.368 -7.386 1.00 71.17 ? 10 DG B OP1 1
ATOM 385 O OP2 . DG B 1 10 ? 12.297 -10.693 -9.513 1.00 68.30 ? 10 DG B OP2 1
ATOM 386 O "O5'" . DG B 1 10 ? 14.019 -9.422 -8.275 1.00 61.21 ? 10 DG B "O5'" 1
ATOM 387 C "C5'" . DG B 1 10 ? 14.258 -8.320 -7.430 1.00 54.13 ? 10 DG B "C5'" 1
ATOM 388 C "C4'" . DG B 1 10 ? 14.443 -7.066 -8.265 1.00 50.12 ? 10 DG B "C4'" 1
ATOM 389 O "O4'" . DG B 1 10 ? 14.309 -5.816 -7.505 1.00 45.53 ? 10 DG B "O4'" 1
ATOM 390 C "C3'" . DG B 1 10 ? 15.829 -7.017 -8.861 1.00 45.74 ? 10 DG B "C3'" 1
ATOM 391 O "O3'" . DG B 1 10 ? 15.693 -6.475 -10.172 1.00 46.31 ? 10 DG B "O3'" 1
ATOM 392 C "C2'" . DG B 1 10 ? 16.596 -6.128 -7.865 1.00 43.17 ? 10 DG B "C2'" 1
ATOM 393 C "C1'" . DG B 1 10 ? 15.558 -5.447 -6.949 1.00 38.05 ? 10 DG B "C1'" 1
ATOM 394 N N9 . DG B 1 10 ? 15.568 -5.929 -5.562 1.00 27.42 ? 10 DG B N9 1
ATOM 395 C C8 . DG B 1 10 ? 15.616 -7.263 -5.239 1.00 27.77 ? 10 DG B C8 1
ATOM 396 N N7 . DG B 1 10 ? 15.622 -7.530 -3.968 1.00 22.27 ? 10 DG B N7 1
ATOM 397 C C5 . DG B 1 10 ? 15.586 -6.288 -3.402 1.00 17.69 ? 10 DG B C5 1
ATOM 398 C C6 . DG B 1 10 ? 15.548 -6.034 -2.034 1.00 26.18 ? 10 DG B C6 1
ATOM 399 O O6 . DG B 1 10 ? 15.569 -6.893 -1.135 1.00 28.64 ? 10 DG B O6 1
ATOM 400 N N1 . DG B 1 10 ? 15.496 -4.670 -1.758 1.00 22.00 ? 10 DG B N1 1
ATOM 401 C C2 . DG B 1 10 ? 15.491 -3.666 -2.713 1.00 24.40 ? 10 DG B C2 1
ATOM 402 N N2 . DG B 1 10 ? 15.448 -2.407 -2.151 1.00 18.58 ? 10 DG B N2 1
ATOM 403 N N3 . DG B 1 10 ? 15.517 -3.921 -4.066 1.00 18.66 ? 10 DG B N3 1
ATOM 404 C C4 . DG B 1 10 ? 15.542 -5.264 -4.336 1.00 24.67 ? 10 DG B C4 1
HETATM 405 CO CO . CO C 2 . ? 6.035 -0.890 1.912 1.00 54.25 ? 11 CO A CO 1
HETATM 406 CO CO . CO D 2 . ? -6.475 -0.516 -2.101 1.00 40.80 ? 11 CO B CO 1
HETATM 407 CO CO . CO E 2 . ? 13.028 -11.999 1.818 1.00 46.60 ? 12 CO B CO 1
HETATM 408 O O . HOH F 3 . ? -13.167 -12.301 -0.762 1.00 23.57 ? 12 HOH A O 1
HETATM 409 O O . HOH F 3 . ? -9.413 -16.094 -7.773 1.00 39.38 ? 13 HOH A O 1
HETATM 410 O O . HOH F 3 . ? -11.726 -18.879 0.791 1.00 27.40 ? 14 HOH A O 1
HETATM 411 O O . HOH F 3 . ? -12.117 -3.710 7.074 1.00 36.76 ? 15 HOH A O 1
HETATM 412 O O . HOH F 3 . ? -13.411 -21.018 -5.968 1.00 25.64 ? 16 HOH A O 1
HETATM 413 O O . HOH F 3 . ? -0.820 0.620 -0.706 1.00 30.17 ? 17 HOH A O 1
HETATM 414 O O . HOH G 3 . ? -6.507 1.761 -1.993 1.00 2.00 ? 13 HOH B O 1
HETATM 415 O O . HOH G 3 . ? 10.969 -19.184 -0.485 1.00 27.26 ? 14 HOH B O 1
HETATM 416 O O . HOH G 3 . ? 15.239 -9.383 -2.235 1.00 20.81 ? 15 HOH B O 1
HETATM 417 O O . HOH G 3 . ? 13.360 -13.890 0.219 1.00 19.20 ? 16 HOH B O 1
HETATM 418 O O . HOH G 3 . ? -6.043 -2.682 -2.712 1.00 27.38 ? 18 HOH B O 1
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