data_3IFF
#
_entry.id 3IFF
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.378
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3IFF pdb_00003iff 10.2210/pdb3iff/pdb
NDB NA0095 ? ?
RCSB RCSB054343 ? ?
WWPDB D_1000054343 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 3IFI
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3IFF
_pdbx_database_status.recvd_initial_deposition_date 2009-07-24
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Sheng, J.' 1
'Gan, J.' 2
'Salon, J.' 3
'Huang, Z.' 4
#
_citation.id primary
_citation.title
;Selenium modification at 2'-position of adenosine for nucleic acid structure studies
;
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Sheng, J.' 1 ?
primary 'Gan, J.' 2 ?
primary 'Salon, J.' 3 ?
primary 'Huang, Z.' 4 ?
#
_cell.entry_id 3IFF
_cell.length_a 38.748
_cell.length_b 38.748
_cell.length_c 76.628
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3IFF
_symmetry.space_group_name_H-M 'P 61'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 169
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3')
;
3137.991 2 ? ? ? Se-DNA-10mer
2 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ?
3 water nat water 18.015 59 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(DT)(DA)(DC)(DG)(DC)(DG)(DT)(XUA)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GTACGCGTAC
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DT n
1 3 DA n
1 4 DC n
1 5 DG n
1 6 DC n
1 7 DG n
1 8 DT n
1 9 XUA n
1 10 DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'Synthesized by solid phase synthesis'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3IFF
_struct_ref.pdbx_db_accession 3IFF
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code GTACGCGTAC
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3IFF A 1 ? 10 ? 3IFF 1 ? 10 ? 1 10
2 1 3IFF B 1 ? 10 ? 3IFF 1 ? 10 ? 1 10
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
XUA 'DNA linking' n
;2'-Se-methyl-2'-selenoadenosine 5'-(dihydrogen phosphate)
;
? 'C11 H16 N5 O6 P Se' 424.208
#
_exptl.entry_id 3IFF
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.65
_exptl_crystal.density_percent_sol 53.51
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pdbx_details
;10% v / v MPD, 40 mM Na Cacodylate pH 7.0, 12 mM Spermine tetra-HCl, 40 mM Lithium Chloride, 80 mM Strontium Chloride, VAPOR DIFFUSION, HANGING DROP, temperature 310K, temperature 293K
;
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 99
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 210'
_diffrn_detector.pdbx_collection_date 2008-10-22
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111)'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9795
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'NSLS BEAMLINE X12C'
_diffrn_source.pdbx_synchrotron_site NSLS
_diffrn_source.pdbx_synchrotron_beamline X12C
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.9795
#
_reflns.entry_id 3IFF
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 30
_reflns.d_resolution_high 1.71
_reflns.number_obs 7686
_reflns.number_all 7932
_reflns.percent_possible_obs 96.9
_reflns.pdbx_Rmerge_I_obs 0.048
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 31.64
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 7.3
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.71
_reflns_shell.d_res_low 1.78
_reflns_shell.percent_possible_all 95.1
_reflns_shell.Rmerge_I_obs 0.39
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 2.94
_reflns_shell.pdbx_redundancy 4.0
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 752
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 3IFF
_refine.ls_number_reflns_obs 6208
_refine.ls_number_reflns_all 6208
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 30
_refine.ls_d_res_high 1.75
_refine.ls_percent_reflns_obs 98.62
_refine.ls_R_factor_obs 0.20609
_refine.ls_R_factor_all 0.20609
_refine.ls_R_factor_R_work 0.20226
_refine.ls_R_factor_R_free 0.27831
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.5
_refine.ls_number_reflns_R_free 294
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.973
_refine.correlation_coeff_Fo_to_Fc_free 0.938
_refine.B_iso_mean 48.071
_refine.aniso_B[1][1] -0.45
_refine.aniso_B[2][2] -0.45
_refine.aniso_B[3][3] 0.68
_refine.aniso_B[1][2] -0.23
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 395D
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model Isotropic
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.119
_refine.pdbx_overall_ESU_R_Free 0.137
_refine.overall_SU_ML 0.152
_refine.overall_SU_B 10.502
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL'
_refine.pdbx_diffrn_id 1
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3IFF
_refine_analyze.Luzzati_coordinate_error_obs 0.119
_refine_analyze.Luzzati_sigma_a_obs 0.152
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free 0.137
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 408
_refine_hist.pdbx_number_atoms_ligand 3
_refine_hist.number_atoms_solvent 59
_refine_hist.number_atoms_total 470
_refine_hist.d_res_high 1.75
_refine_hist.d_res_low 30
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.011 0.021 ? 456 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1.964 3.000 ? 700 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.094 0.200 ? 80 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.010 0.020 ? 210 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.171 0.200 ? 151 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.284 0.200 ? 279 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.183 0.200 ? 44 'X-RAY DIFFRACTION' ?
r_metal_ion_refined 0.063 0.200 ? 2 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.143 0.200 ? 35 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.129 0.200 ? 3 'X-RAY DIFFRACTION' ?
r_scbond_it 1.659 3.000 ? 663 'X-RAY DIFFRACTION' ?
r_scangle_it 2.317 4.500 ? 700 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.750
_refine_ls_shell.d_res_low 1.795
_refine_ls_shell.number_reflns_R_work 446
_refine_ls_shell.R_factor_R_work 0.386
_refine_ls_shell.percent_reflns_obs 97.67
_refine_ls_shell.R_factor_R_free 0.494
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 15
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3IFF
_struct.title
;2'-SeMe-A modified DNA decamer
;
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3IFF
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Selenium, nucleic acid, Adenosine, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 2 ?
F N N 3 ?
G N N 3 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DT 8 "O3'" ? ? ? 1_555 A XUA 9 P ? ? A DT 8 A XUA 9 1_555 ? ? ? ? ? ? ? 1.582 ? ?
covale2 covale both ? A XUA 9 "O3'" ? ? ? 1_555 A DC 10 P ? ? A XUA 9 A DC 10 1_555 ? ? ? ? ? ? ? 1.610 ? ?
covale3 covale both ? B DT 8 "O3'" ? ? ? 1_555 B XUA 9 P ? ? B DT 8 B XUA 9 1_555 ? ? ? ? ? ? ? 1.585 ? ?
covale4 covale both ? B XUA 9 "O3'" ? ? ? 1_555 B DC 10 P ? ? B XUA 9 B DC 10 1_555 ? ? ? ? ? ? ? 1.586 ? ?
metalc1 metalc ? ? F HOH . O ? ? ? 1_555 E MG . MG ? ? A HOH 36 B MG 62 1_555 ? ? ? ? ? ? ? 2.141 ? ?
metalc2 metalc ? ? F HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 38 A MG 60 1_555 ? ? ? ? ? ? ? 1.955 ? ?
metalc3 metalc ? ? F HOH . O ? ? ? 1_555 E MG . MG ? ? A HOH 52 B MG 62 1_555 ? ? ? ? ? ? ? 2.233 ? ?
metalc4 metalc ? ? B DT 2 OP2 ? ? ? 1_555 D MG . MG ? ? B DT 2 B MG 61 1_555 ? ? ? ? ? ? ? 1.907 ? ?
metalc5 metalc ? ? G HOH . O ? ? ? 1_555 E MG . MG ? ? B HOH 15 B MG 62 1_555 ? ? ? ? ? ? ? 2.412 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 1 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 1 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 1 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B XUA 9 N1 ? ? A DT 2 B XUA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B XUA 9 N6 ? ? A DT 2 B XUA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 4 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 4 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 4 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 7 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 7 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 7 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A XUA 9 N1 ? ? ? 1_555 B DT 2 N3 ? ? A XUA 9 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A XUA 9 N6 ? ? ? 1_555 B DT 2 O4 ? ? A XUA 9 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A MG 60 ? 3 'BINDING SITE FOR RESIDUE MG A 60'
AC2 Software B MG 61 ? 2 'BINDING SITE FOR RESIDUE MG B 61'
AC3 Software B MG 62 ? 3 'BINDING SITE FOR RESIDUE MG B 62'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 3 HOH F . ? HOH A 29 . ? 1_555 ?
2 AC1 3 HOH F . ? HOH A 38 . ? 1_555 ?
3 AC1 3 HOH F . ? HOH A 45 . ? 1_555 ?
4 AC2 2 DG B 1 ? DG B 1 . ? 1_555 ?
5 AC2 2 DT B 2 ? DT B 2 . ? 1_555 ?
6 AC3 3 HOH F . ? HOH A 36 . ? 1_555 ?
7 AC3 3 HOH F . ? HOH A 52 . ? 1_555 ?
8 AC3 3 HOH G . ? HOH B 15 . ? 1_555 ?
#
_database_PDB_matrix.entry_id 3IFF
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 3IFF
_atom_sites.fract_transf_matrix[1][1] 0.025808
_atom_sites.fract_transf_matrix[1][2] 0.014900
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.029800
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.013050
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MG
N
O
P
SE
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 32.469 15.737 -2.901 1.00 46.59 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? 31.234 16.426 -2.753 1.00 44.87 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 31.340 17.324 -1.545 1.00 43.15 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 31.476 16.463 -0.408 1.00 41.79 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 32.560 18.214 -1.472 1.00 44.67 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 32.280 19.410 -2.163 1.00 47.17 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 32.619 18.465 0.022 1.00 43.45 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 32.266 17.091 0.559 1.00 41.48 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 33.421 16.232 0.766 1.00 41.77 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 33.827 15.154 0.027 1.00 41.67 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 34.911 14.594 0.491 1.00 42.62 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 35.244 15.345 1.595 1.00 41.32 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 36.321 15.215 2.492 1.00 41.76 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 37.214 14.372 2.487 1.00 41.62 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 36.291 16.192 3.475 1.00 41.65 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 35.336 17.157 3.581 1.00 42.40 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 35.449 18.019 4.600 1.00 42.90 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 34.312 17.290 2.742 1.00 40.60 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 34.345 16.357 1.771 1.00 41.17 ? 1 DG A C4 1
ATOM 20 P P . DT A 1 2 ? 33.423 20.175 -2.975 1.00 50.81 ? 2 DT A P 1
ATOM 21 O OP1 . DT A 1 2 ? 32.715 21.168 -3.823 1.00 51.76 ? 2 DT A OP1 1
ATOM 22 O OP2 . DT A 1 2 ? 34.333 19.180 -3.606 1.00 49.31 ? 2 DT A OP2 1
ATOM 23 O "O5'" . DT A 1 2 ? 34.240 20.948 -1.848 1.00 49.60 ? 2 DT A "O5'" 1
ATOM 24 C "C5'" . DT A 1 2 ? 33.619 21.999 -1.138 1.00 50.59 ? 2 DT A "C5'" 1
ATOM 25 C "C4'" . DT A 1 2 ? 34.469 22.302 0.065 1.00 52.07 ? 2 DT A "C4'" 1
ATOM 26 O "O4'" . DT A 1 2 ? 34.613 21.049 0.766 1.00 50.83 ? 2 DT A "O4'" 1
ATOM 27 C "C3'" . DT A 1 2 ? 35.913 22.706 -0.242 1.00 53.50 ? 2 DT A "C3'" 1
ATOM 28 O "O3'" . DT A 1 2 ? 36.053 24.094 -0.378 1.00 55.74 ? 2 DT A "O3'" 1
ATOM 29 C "C2'" . DT A 1 2 ? 36.616 22.293 1.029 1.00 53.09 ? 2 DT A "C2'" 1
ATOM 30 C "C1'" . DT A 1 2 ? 35.893 21.002 1.363 1.00 51.29 ? 2 DT A "C1'" 1
ATOM 31 N N1 . DT A 1 2 ? 36.627 19.731 0.991 1.00 50.23 ? 2 DT A N1 1
ATOM 32 C C2 . DT A 1 2 ? 37.603 19.276 1.849 1.00 49.54 ? 2 DT A C2 1
ATOM 33 O O2 . DT A 1 2 ? 37.909 19.864 2.855 1.00 50.44 ? 2 DT A O2 1
ATOM 34 N N3 . DT A 1 2 ? 38.208 18.105 1.507 1.00 47.79 ? 2 DT A N3 1
ATOM 35 C C4 . DT A 1 2 ? 37.930 17.360 0.380 1.00 49.88 ? 2 DT A C4 1
ATOM 36 O O4 . DT A 1 2 ? 38.550 16.322 0.153 1.00 49.49 ? 2 DT A O4 1
ATOM 37 C C5 . DT A 1 2 ? 36.887 17.892 -0.490 1.00 47.71 ? 2 DT A C5 1
ATOM 38 C C7 . DT A 1 2 ? 36.472 17.199 -1.745 1.00 49.56 ? 2 DT A C7 1
ATOM 39 C C6 . DT A 1 2 ? 36.287 19.029 -0.150 1.00 48.73 ? 2 DT A C6 1
ATOM 40 P P . DA A 1 3 ? 37.334 24.638 -1.153 1.00 57.97 ? 3 DA A P 1
ATOM 41 O OP1 . DA A 1 3 ? 37.118 26.093 -1.273 1.00 57.71 ? 3 DA A OP1 1
ATOM 42 O OP2 . DA A 1 3 ? 37.543 23.775 -2.349 1.00 57.31 ? 3 DA A OP2 1
ATOM 43 O "O5'" . DA A 1 3 ? 38.563 24.357 -0.166 1.00 56.96 ? 3 DA A "O5'" 1
ATOM 44 C "C5'" . DA A 1 3 ? 38.821 25.227 0.917 1.00 56.43 ? 3 DA A "C5'" 1
ATOM 45 C "C4'" . DA A 1 3 ? 40.040 24.727 1.641 1.00 55.95 ? 3 DA A "C4'" 1
ATOM 46 O "O4'" . DA A 1 3 ? 39.788 23.348 1.988 1.00 55.73 ? 3 DA A "O4'" 1
ATOM 47 C "C3'" . DA A 1 3 ? 41.293 24.650 0.793 1.00 55.53 ? 3 DA A "C3'" 1
ATOM 48 O "O3'" . DA A 1 3 ? 41.992 25.846 0.842 1.00 57.12 ? 3 DA A "O3'" 1
ATOM 49 C "C2'" . DA A 1 3 ? 42.088 23.591 1.526 1.00 54.27 ? 3 DA A "C2'" 1
ATOM 50 C "C1'" . DA A 1 3 ? 40.999 22.622 1.929 1.00 52.38 ? 3 DA A "C1'" 1
ATOM 51 N N9 . DA A 1 3 ? 40.878 21.426 1.074 1.00 51.74 ? 3 DA A N9 1
ATOM 52 C C8 . DA A 1 3 ? 40.064 21.182 -0.005 1.00 49.32 ? 3 DA A C8 1
ATOM 53 N N7 . DA A 1 3 ? 40.229 19.983 -0.529 1.00 47.38 ? 3 DA A N7 1
ATOM 54 C C5 . DA A 1 3 ? 41.194 19.413 0.283 1.00 47.49 ? 3 DA A C5 1
ATOM 55 C C6 . DA A 1 3 ? 41.819 18.148 0.279 1.00 47.76 ? 3 DA A C6 1
ATOM 56 N N6 . DA A 1 3 ? 41.524 17.184 -0.595 1.00 48.78 ? 3 DA A N6 1
ATOM 57 N N1 . DA A 1 3 ? 42.751 17.924 1.221 1.00 50.08 ? 3 DA A N1 1
ATOM 58 C C2 . DA A 1 3 ? 43.072 18.882 2.114 1.00 49.98 ? 3 DA A C2 1
ATOM 59 N N3 . DA A 1 3 ? 42.539 20.106 2.209 1.00 49.51 ? 3 DA A N3 1
ATOM 60 C C4 . DA A 1 3 ? 41.615 20.291 1.260 1.00 47.96 ? 3 DA A C4 1
ATOM 61 P P . DC A 1 4 ? 43.009 26.223 -0.337 1.00 59.82 ? 4 DC A P 1
ATOM 62 O OP1 . DC A 1 4 ? 43.170 27.684 -0.249 1.00 59.07 ? 4 DC A OP1 1
ATOM 63 O OP2 . DC A 1 4 ? 42.621 25.632 -1.647 1.00 59.83 ? 4 DC A OP2 1
ATOM 64 O "O5'" . DC A 1 4 ? 44.350 25.500 0.143 1.00 57.77 ? 4 DC A "O5'" 1
ATOM 65 C "C5'" . DC A 1 4 ? 44.905 25.774 1.406 1.00 55.90 ? 4 DC A "C5'" 1
ATOM 66 C "C4'" . DC A 1 4 ? 45.963 24.737 1.670 1.00 55.27 ? 4 DC A "C4'" 1
ATOM 67 O "O4'" . DC A 1 4 ? 45.230 23.518 1.811 1.00 56.98 ? 4 DC A "O4'" 1
ATOM 68 C "C3'" . DC A 1 4 ? 46.930 24.390 0.546 1.00 55.99 ? 4 DC A "C3'" 1
ATOM 69 O "O3'" . DC A 1 4 ? 48.037 25.251 0.506 1.00 54.37 ? 4 DC A "O3'" 1
ATOM 70 C "C2'" . DC A 1 4 ? 47.397 23.021 0.998 1.00 55.05 ? 4 DC A "C2'" 1
ATOM 71 C "C1'" . DC A 1 4 ? 46.072 22.445 1.436 1.00 53.22 ? 4 DC A "C1'" 1
ATOM 72 N N1 . DC A 1 4 ? 45.400 21.629 0.390 1.00 52.22 ? 4 DC A N1 1
ATOM 73 C C2 . DC A 1 4 ? 45.746 20.277 0.334 1.00 50.05 ? 4 DC A C2 1
ATOM 74 O O2 . DC A 1 4 ? 46.591 19.863 1.135 1.00 50.74 ? 4 DC A O2 1
ATOM 75 N N3 . DC A 1 4 ? 45.140 19.489 -0.582 1.00 48.74 ? 4 DC A N3 1
ATOM 76 C C4 . DC A 1 4 ? 44.253 19.990 -1.425 1.00 50.38 ? 4 DC A C4 1
ATOM 77 N N4 . DC A 1 4 ? 43.712 19.158 -2.312 1.00 49.80 ? 4 DC A N4 1
ATOM 78 C C5 . DC A 1 4 ? 43.877 21.373 -1.389 1.00 50.38 ? 4 DC A C5 1
ATOM 79 C C6 . DC A 1 4 ? 44.468 22.144 -0.465 1.00 51.54 ? 4 DC A C6 1
ATOM 80 P P . DG A 1 5 ? 48.865 25.425 -0.837 1.00 56.47 ? 5 DG A P 1
ATOM 81 O OP1 . DG A 1 5 ? 49.638 26.656 -0.617 1.00 58.51 ? 5 DG A OP1 1
ATOM 82 O OP2 . DG A 1 5 ? 48.065 25.341 -2.072 1.00 57.79 ? 5 DG A OP2 1
ATOM 83 O "O5'" . DG A 1 5 ? 49.821 24.132 -0.833 1.00 55.87 ? 5 DG A "O5'" 1
ATOM 84 C "C5'" . DG A 1 5 ? 50.898 23.973 0.098 1.00 51.57 ? 5 DG A "C5'" 1
ATOM 85 C "C4'" . DG A 1 5 ? 51.601 22.658 -0.157 1.00 48.75 ? 5 DG A "C4'" 1
ATOM 86 O "O4'" . DG A 1 5 ? 50.587 21.675 0.049 1.00 47.51 ? 5 DG A "O4'" 1
ATOM 87 C "C3'" . DG A 1 5 ? 52.039 22.347 -1.583 1.00 48.68 ? 5 DG A "C3'" 1
ATOM 88 O "O3'" . DG A 1 5 ? 53.310 22.892 -1.916 1.00 49.20 ? 5 DG A "O3'" 1
ATOM 89 C "C2'" . DG A 1 5 ? 52.144 20.838 -1.527 1.00 46.51 ? 5 DG A "C2'" 1
ATOM 90 C "C1'" . DG A 1 5 ? 50.866 20.560 -0.766 1.00 43.42 ? 5 DG A "C1'" 1
ATOM 91 N N9 . DG A 1 5 ? 49.660 20.282 -1.551 1.00 43.36 ? 5 DG A N9 1
ATOM 92 C C8 . DG A 1 5 ? 48.549 21.061 -1.780 1.00 41.28 ? 5 DG A C8 1
ATOM 93 N N7 . DG A 1 5 ? 47.661 20.468 -2.529 1.00 42.77 ? 5 DG A N7 1
ATOM 94 C C5 . DG A 1 5 ? 48.226 19.233 -2.812 1.00 41.21 ? 5 DG A C5 1
ATOM 95 C C6 . DG A 1 5 ? 47.749 18.149 -3.560 1.00 40.48 ? 5 DG A C6 1
ATOM 96 O O6 . DG A 1 5 ? 46.678 18.077 -4.138 1.00 41.98 ? 5 DG A O6 1
ATOM 97 N N1 . DG A 1 5 ? 48.668 17.103 -3.618 1.00 39.77 ? 5 DG A N1 1
ATOM 98 C C2 . DG A 1 5 ? 49.874 17.112 -2.986 1.00 40.59 ? 5 DG A C2 1
ATOM 99 N N2 . DG A 1 5 ? 50.663 16.050 -3.108 1.00 41.31 ? 5 DG A N2 1
ATOM 100 N N3 . DG A 1 5 ? 50.340 18.107 -2.267 1.00 41.36 ? 5 DG A N3 1
ATOM 101 C C4 . DG A 1 5 ? 49.451 19.119 -2.225 1.00 42.77 ? 5 DG A C4 1
ATOM 102 P P . DC A 1 6 ? 53.609 23.351 -3.403 1.00 49.37 ? 6 DC A P 1
ATOM 103 O OP1 . DC A 1 6 ? 54.849 24.142 -3.322 1.00 50.85 ? 6 DC A OP1 1
ATOM 104 O OP2 . DC A 1 6 ? 52.389 23.936 -4.005 1.00 50.08 ? 6 DC A OP2 1
ATOM 105 O "O5'" . DC A 1 6 ? 53.922 22.013 -4.199 1.00 47.91 ? 6 DC A "O5'" 1
ATOM 106 C "C5'" . DC A 1 6 ? 55.047 21.240 -3.855 1.00 46.26 ? 6 DC A "C5'" 1
ATOM 107 C "C4'" . DC A 1 6 ? 54.943 19.921 -4.568 1.00 43.41 ? 6 DC A "C4'" 1
ATOM 108 O "O4'" . DC A 1 6 ? 53.712 19.287 -4.218 1.00 44.85 ? 6 DC A "O4'" 1
ATOM 109 C "C3'" . DC A 1 6 ? 54.830 20.010 -6.063 1.00 43.58 ? 6 DC A "C3'" 1
ATOM 110 O "O3'" . DC A 1 6 ? 56.090 20.268 -6.632 1.00 45.99 ? 6 DC A "O3'" 1
ATOM 111 C "C2'" . DC A 1 6 ? 54.357 18.601 -6.365 1.00 41.83 ? 6 DC A "C2'" 1
ATOM 112 C "C1'" . DC A 1 6 ? 53.308 18.454 -5.275 1.00 41.92 ? 6 DC A "C1'" 1
ATOM 113 N N1 . DC A 1 6 ? 51.895 18.863 -5.629 1.00 39.34 ? 6 DC A N1 1
ATOM 114 C C2 . DC A 1 6 ? 51.104 18.012 -6.370 1.00 39.74 ? 6 DC A C2 1
ATOM 115 O O2 . DC A 1 6 ? 51.571 16.943 -6.768 1.00 39.63 ? 6 DC A O2 1
ATOM 116 N N3 . DC A 1 6 ? 49.828 18.399 -6.652 1.00 39.14 ? 6 DC A N3 1
ATOM 117 C C4 . DC A 1 6 ? 49.342 19.566 -6.230 1.00 40.50 ? 6 DC A C4 1
ATOM 118 N N4 . DC A 1 6 ? 48.069 19.848 -6.558 1.00 39.08 ? 6 DC A N4 1
ATOM 119 C C5 . DC A 1 6 ? 50.145 20.464 -5.458 1.00 40.09 ? 6 DC A C5 1
ATOM 120 C C6 . DC A 1 6 ? 51.383 20.054 -5.186 1.00 39.62 ? 6 DC A C6 1
ATOM 121 P P . DG A 1 7 ? 56.255 21.134 -7.949 1.00 46.78 ? 7 DG A P 1
ATOM 122 O OP1 . DG A 1 7 ? 57.691 21.361 -8.139 1.00 46.48 ? 7 DG A OP1 1
ATOM 123 O OP2 . DG A 1 7 ? 55.323 22.266 -7.901 1.00 45.38 ? 7 DG A OP2 1
ATOM 124 O "O5'" . DG A 1 7 ? 55.742 20.093 -9.051 1.00 46.85 ? 7 DG A "O5'" 1
ATOM 125 C "C5'" . DG A 1 7 ? 54.851 20.452 -10.073 1.00 45.66 ? 7 DG A "C5'" 1
ATOM 126 C "C4'" . DG A 1 7 ? 54.372 19.171 -10.708 1.00 45.29 ? 7 DG A "C4'" 1
ATOM 127 O "O4'" . DG A 1 7 ? 53.426 18.519 -9.813 1.00 44.43 ? 7 DG A "O4'" 1
ATOM 128 C "C3'" . DG A 1 7 ? 53.604 19.410 -11.982 1.00 45.80 ? 7 DG A "C3'" 1
ATOM 129 O "O3'" . DG A 1 7 ? 54.511 19.440 -13.057 1.00 46.49 ? 7 DG A "O3'" 1
ATOM 130 C "C2'" . DG A 1 7 ? 52.698 18.193 -12.032 1.00 43.98 ? 7 DG A "C2'" 1
ATOM 131 C "C1'" . DG A 1 7 ? 52.295 18.104 -10.559 1.00 41.65 ? 7 DG A "C1'" 1
ATOM 132 N N9 . DG A 1 7 ? 51.105 18.872 -10.189 1.00 39.95 ? 7 DG A N9 1
ATOM 133 C C8 . DG A 1 7 ? 51.039 20.021 -9.434 1.00 39.13 ? 7 DG A C8 1
ATOM 134 N N7 . DG A 1 7 ? 49.824 20.456 -9.286 1.00 38.97 ? 7 DG A N7 1
ATOM 135 C C5 . DG A 1 7 ? 49.040 19.561 -9.995 1.00 37.46 ? 7 DG A C5 1
ATOM 136 C C6 . DG A 1 7 ? 47.639 19.537 -10.188 1.00 37.93 ? 7 DG A C6 1
ATOM 137 O O6 . DG A 1 7 ? 46.790 20.326 -9.769 1.00 40.62 ? 7 DG A O6 1
ATOM 138 N N1 . DG A 1 7 ? 47.235 18.486 -10.980 1.00 37.93 ? 7 DG A N1 1
ATOM 139 C C2 . DG A 1 7 ? 48.086 17.551 -11.509 1.00 38.75 ? 7 DG A C2 1
ATOM 140 N N2 . DG A 1 7 ? 47.526 16.583 -12.252 1.00 39.26 ? 7 DG A N2 1
ATOM 141 N N3 . DG A 1 7 ? 49.398 17.540 -11.327 1.00 39.39 ? 7 DG A N3 1
ATOM 142 C C4 . DG A 1 7 ? 49.804 18.591 -10.564 1.00 38.90 ? 7 DG A C4 1
ATOM 143 P P . DT A 1 8 ? 54.322 20.504 -14.228 1.00 47.30 ? 8 DT A P 1
ATOM 144 O OP1 . DT A 1 8 ? 55.429 20.286 -15.147 1.00 47.91 ? 8 DT A OP1 1
ATOM 145 O OP2 . DT A 1 8 ? 53.967 21.850 -13.726 1.00 48.92 ? 8 DT A OP2 1
ATOM 146 O "O5'" . DT A 1 8 ? 53.018 19.996 -14.977 1.00 46.76 ? 8 DT A "O5'" 1
ATOM 147 C "C5'" . DT A 1 8 ? 53.086 18.826 -15.780 1.00 43.97 ? 8 DT A "C5'" 1
ATOM 148 C "C4'" . DT A 1 8 ? 51.674 18.437 -16.117 1.00 42.11 ? 8 DT A "C4'" 1
ATOM 149 O "O4'" . DT A 1 8 ? 50.895 18.340 -14.901 1.00 42.19 ? 8 DT A "O4'" 1
ATOM 150 C "C3'" . DT A 1 8 ? 50.935 19.538 -16.849 1.00 43.75 ? 8 DT A "C3'" 1
ATOM 151 O "O3'" . DT A 1 8 ? 51.385 19.576 -18.185 1.00 45.14 ? 8 DT A "O3'" 1
ATOM 152 C "C2'" . DT A 1 8 ? 49.522 19.018 -16.690 1.00 42.56 ? 8 DT A "C2'" 1
ATOM 153 C "C1'" . DT A 1 8 ? 49.544 18.619 -15.229 1.00 42.73 ? 8 DT A "C1'" 1
ATOM 154 N N1 . DT A 1 8 ? 49.034 19.684 -14.368 1.00 43.27 ? 8 DT A N1 1
ATOM 155 C C2 . DT A 1 8 ? 47.646 19.830 -14.251 1.00 42.74 ? 8 DT A C2 1
ATOM 156 O O2 . DT A 1 8 ? 46.795 19.149 -14.806 1.00 43.06 ? 8 DT A O2 1
ATOM 157 N N3 . DT A 1 8 ? 47.270 20.823 -13.419 1.00 41.85 ? 8 DT A N3 1
ATOM 158 C C4 . DT A 1 8 ? 48.103 21.668 -12.726 1.00 41.51 ? 8 DT A C4 1
ATOM 159 O O4 . DT A 1 8 ? 47.606 22.527 -12.027 1.00 42.83 ? 8 DT A O4 1
ATOM 160 C C5 . DT A 1 8 ? 49.525 21.481 -12.880 1.00 41.44 ? 8 DT A C5 1
ATOM 161 C C7 . DT A 1 8 ? 50.512 22.354 -12.158 1.00 41.87 ? 8 DT A C7 1
ATOM 162 C C6 . DT A 1 8 ? 49.939 20.501 -13.697 1.00 41.80 ? 8 DT A C6 1
HETATM 163 P P . XUA A 1 9 ? 50.935 20.715 -19.186 1.00 47.12 ? 9 XUA A P 1
HETATM 164 N N1 . XUA A 1 9 ? 43.970 23.610 -14.960 1.00 44.76 ? 9 XUA A N1 1
HETATM 165 C C2 . XUA A 1 9 ? 43.327 22.839 -15.857 1.00 43.19 ? 9 XUA A C2 1
HETATM 166 N N3 . XUA A 1 9 ? 43.883 22.090 -16.805 1.00 43.19 ? 9 XUA A N3 1
HETATM 167 C C4 . XUA A 1 9 ? 45.236 22.164 -16.797 1.00 42.00 ? 9 XUA A C4 1
HETATM 168 C C5 . XUA A 1 9 ? 46.026 22.913 -15.953 1.00 42.21 ? 9 XUA A C5 1
HETATM 169 C C6 . XUA A 1 9 ? 45.327 23.674 -14.979 1.00 43.82 ? 9 XUA A C6 1
HETATM 170 N N6 . XUA A 1 9 ? 45.926 24.462 -14.076 1.00 43.66 ? 9 XUA A N6 1
HETATM 171 N N7 . XUA A 1 9 ? 47.371 22.768 -16.271 1.00 40.08 ? 9 XUA A N7 1
HETATM 172 C C8 . XUA A 1 9 ? 47.360 21.930 -17.271 1.00 41.14 ? 9 XUA A C8 1
HETATM 173 N N9 . XUA A 1 9 ? 46.109 21.541 -17.647 1.00 42.83 ? 9 XUA A N9 1
HETATM 174 C "C1'" . XUA A 1 9 ? 45.739 20.585 -18.700 1.00 45.45 ? 9 XUA A "C1'" 1
HETATM 175 O OP1 . XUA A 1 9 ? 51.638 20.383 -20.424 1.00 49.19 ? 9 XUA A OP1 1
HETATM 176 C "C2'" . XUA A 1 9 ? 45.454 21.185 -20.055 1.00 48.31 ? 9 XUA A "C2'" 1
HETATM 177 SE "SE2'" . XUA A 1 9 ? 44.082 20.193 -21.070 0.70 53.76 ? 9 XUA A "SE2'" 1
HETATM 178 O OP2 . XUA A 1 9 ? 51.124 22.016 -18.498 1.00 46.87 ? 9 XUA A OP2 1
HETATM 179 C "C3'" . XUA A 1 9 ? 46.829 21.048 -20.711 1.00 47.36 ? 9 XUA A "C3'" 1
HETATM 180 O "O3'" . XUA A 1 9 ? 46.753 21.174 -22.127 1.00 48.27 ? 9 XUA A "O3'" 1
HETATM 181 C "C4'" . XUA A 1 9 ? 47.290 19.690 -20.207 1.00 48.16 ? 9 XUA A "C4'" 1
HETATM 182 O "O4'" . XUA A 1 9 ? 46.807 19.651 -18.851 1.00 46.68 ? 9 XUA A "O4'" 1
HETATM 183 C "C5'" . XUA A 1 9 ? 48.787 19.467 -20.157 1.00 48.40 ? 9 XUA A "C5'" 1
HETATM 184 O "O5'" . XUA A 1 9 ? 49.359 20.520 -19.406 1.00 48.35 ? 9 XUA A "O5'" 1
HETATM 185 C "CA'" . XUA A 1 9 ? 42.609 20.201 -19.788 0.70 50.80 ? 9 XUA A "CA'" 1
ATOM 186 P P . DC A 1 10 ? 47.319 22.503 -22.838 1.00 52.71 ? 10 DC A P 1
ATOM 187 O OP1 . DC A 1 10 ? 47.534 22.173 -24.250 1.00 55.16 ? 10 DC A OP1 1
ATOM 188 O OP2 . DC A 1 10 ? 48.456 23.063 -22.082 1.00 54.22 ? 10 DC A OP2 1
ATOM 189 O "O5'" . DC A 1 10 ? 46.164 23.583 -22.772 1.00 48.45 ? 10 DC A "O5'" 1
ATOM 190 C "C5'" . DC A 1 10 ? 44.914 23.318 -23.382 1.00 49.03 ? 10 DC A "C5'" 1
ATOM 191 C "C4'" . DC A 1 10 ? 43.774 24.060 -22.716 1.00 47.55 ? 10 DC A "C4'" 1
ATOM 192 O "O4'" . DC A 1 10 ? 43.662 23.597 -21.338 1.00 48.85 ? 10 DC A "O4'" 1
ATOM 193 C "C3'" . DC A 1 10 ? 43.984 25.549 -22.583 1.00 47.31 ? 10 DC A "C3'" 1
ATOM 194 O "O3'" . DC A 1 10 ? 43.800 26.205 -23.832 1.00 47.62 ? 10 DC A "O3'" 1
ATOM 195 C "C2'" . DC A 1 10 ? 42.901 25.814 -21.536 1.00 46.92 ? 10 DC A "C2'" 1
ATOM 196 C "C1'" . DC A 1 10 ? 43.139 24.650 -20.555 1.00 44.41 ? 10 DC A "C1'" 1
ATOM 197 N N1 . DC A 1 10 ? 44.068 25.061 -19.434 1.00 42.33 ? 10 DC A N1 1
ATOM 198 C C2 . DC A 1 10 ? 43.518 25.654 -18.282 1.00 41.82 ? 10 DC A C2 1
ATOM 199 O O2 . DC A 1 10 ? 42.285 25.790 -18.183 1.00 43.21 ? 10 DC A O2 1
ATOM 200 N N3 . DC A 1 10 ? 44.346 26.049 -17.292 1.00 39.10 ? 10 DC A N3 1
ATOM 201 C C4 . DC A 1 10 ? 45.654 25.914 -17.430 1.00 39.61 ? 10 DC A C4 1
ATOM 202 N N4 . DC A 1 10 ? 46.428 26.340 -16.449 1.00 40.57 ? 10 DC A N4 1
ATOM 203 C C5 . DC A 1 10 ? 46.242 25.327 -18.579 1.00 39.91 ? 10 DC A C5 1
ATOM 204 C C6 . DC A 1 10 ? 45.420 24.931 -19.554 1.00 41.40 ? 10 DC A C6 1
ATOM 205 O "O5'" . DG B 1 1 ? 41.204 30.921 -8.866 1.00 46.34 ? 1 DG B "O5'" 1
ATOM 206 C "C5'" . DG B 1 1 ? 40.114 31.757 -9.096 1.00 44.76 ? 1 DG B "C5'" 1
ATOM 207 C "C4'" . DG B 1 1 ? 39.376 31.229 -10.290 1.00 42.80 ? 1 DG B "C4'" 1
ATOM 208 O "O4'" . DG B 1 1 ? 40.195 31.579 -11.398 1.00 41.76 ? 1 DG B "O4'" 1
ATOM 209 C "C3'" . DG B 1 1 ? 39.222 29.736 -10.401 1.00 44.82 ? 1 DG B "C3'" 1
ATOM 210 O "O3'" . DG B 1 1 ? 38.055 29.403 -9.706 1.00 47.64 ? 1 DG B "O3'" 1
ATOM 211 C "C2'" . DG B 1 1 ? 39.028 29.612 -11.899 1.00 43.18 ? 1 DG B "C2'" 1
ATOM 212 C "C1'" . DG B 1 1 ? 40.063 30.604 -12.386 1.00 41.25 ? 1 DG B "C1'" 1
ATOM 213 N N9 . DG B 1 1 ? 41.380 30.049 -12.578 1.00 41.57 ? 1 DG B N9 1
ATOM 214 C C8 . DG B 1 1 ? 42.509 30.246 -11.833 1.00 41.29 ? 1 DG B C8 1
ATOM 215 N N7 . DG B 1 1 ? 43.539 29.583 -12.278 1.00 42.69 ? 1 DG B N7 1
ATOM 216 C C5 . DG B 1 1 ? 43.065 28.898 -13.385 1.00 41.42 ? 1 DG B C5 1
ATOM 217 C C6 . DG B 1 1 ? 43.726 28.024 -14.284 1.00 41.91 ? 1 DG B C6 1
ATOM 218 O O6 . DG B 1 1 ? 44.908 27.663 -14.301 1.00 41.98 ? 1 DG B O6 1
ATOM 219 N N1 . DG B 1 1 ? 42.855 27.552 -15.255 1.00 41.76 ? 1 DG B N1 1
ATOM 220 C C2 . DG B 1 1 ? 41.541 27.906 -15.359 1.00 42.26 ? 1 DG B C2 1
ATOM 221 N N2 . DG B 1 1 ? 40.855 27.369 -16.376 1.00 42.82 ? 1 DG B N2 1
ATOM 222 N N3 . DG B 1 1 ? 40.906 28.736 -14.532 1.00 40.24 ? 1 DG B N3 1
ATOM 223 C C4 . DG B 1 1 ? 41.734 29.170 -13.568 1.00 40.61 ? 1 DG B C4 1
ATOM 224 P P . DT B 1 2 ? 37.867 27.975 -9.020 1.00 49.94 ? 2 DT B P 1
ATOM 225 O OP1 . DT B 1 2 ? 36.609 28.071 -8.253 1.00 52.27 ? 2 DT B OP1 1
ATOM 226 O OP2 . DT B 1 2 ? 39.099 27.589 -8.311 1.00 50.27 ? 2 DT B OP2 1
ATOM 227 O "O5'" . DT B 1 2 ? 37.636 26.941 -10.200 1.00 49.55 ? 2 DT B "O5'" 1
ATOM 228 C "C5'" . DT B 1 2 ? 36.362 26.808 -10.801 1.00 50.74 ? 2 DT B "C5'" 1
ATOM 229 C "C4'" . DT B 1 2 ? 36.616 26.008 -12.042 1.00 52.35 ? 2 DT B "C4'" 1
ATOM 230 O "O4'" . DT B 1 2 ? 37.844 26.550 -12.559 1.00 51.67 ? 2 DT B "O4'" 1
ATOM 231 C "C3'" . DT B 1 2 ? 37.029 24.560 -11.803 1.00 53.82 ? 2 DT B "C3'" 1
ATOM 232 O "O3'" . DT B 1 2 ? 35.916 23.705 -11.637 1.00 56.45 ? 2 DT B "O3'" 1
ATOM 233 C "C2'" . DT B 1 2 ? 37.736 24.258 -13.104 1.00 52.42 ? 2 DT B "C2'" 1
ATOM 234 C "C1'" . DT B 1 2 ? 38.543 25.530 -13.242 1.00 50.73 ? 2 DT B "C1'" 1
ATOM 235 N N1 . DT B 1 2 ? 39.993 25.519 -12.827 1.00 50.21 ? 2 DT B N1 1
ATOM 236 C C2 . DT B 1 2 ? 40.877 24.913 -13.682 1.00 49.41 ? 2 DT B C2 1
ATOM 237 O O2 . DT B 1 2 ? 40.518 24.368 -14.700 1.00 51.00 ? 2 DT B O2 1
ATOM 238 N N3 . DT B 1 2 ? 42.185 24.965 -13.322 1.00 47.31 ? 2 DT B N3 1
ATOM 239 C C4 . DT B 1 2 ? 42.688 25.566 -12.190 1.00 49.66 ? 2 DT B C4 1
ATOM 240 O O4 . DT B 1 2 ? 43.897 25.543 -11.950 1.00 50.02 ? 2 DT B O4 1
ATOM 241 C C5 . DT B 1 2 ? 41.707 26.196 -11.325 1.00 47.51 ? 2 DT B C5 1
ATOM 242 C C7 . DT B 1 2 ? 42.120 26.874 -10.062 1.00 48.54 ? 2 DT B C7 1
ATOM 243 C C6 . DT B 1 2 ? 40.425 26.153 -11.679 1.00 48.31 ? 2 DT B C6 1
ATOM 244 P P . DA B 1 3 ? 36.096 22.369 -10.784 1.00 58.55 ? 3 DA B P 1
ATOM 245 O OP1 . DA B 1 3 ? 34.716 21.873 -10.613 1.00 57.96 ? 3 DA B OP1 1
ATOM 246 O OP2 . DA B 1 3 ? 36.961 22.675 -9.605 1.00 58.51 ? 3 DA B OP2 1
ATOM 247 O "O5'" . DA B 1 3 ? 36.952 21.388 -11.716 1.00 56.79 ? 3 DA B "O5'" 1
ATOM 248 C "C5'" . DA B 1 3 ? 36.453 20.994 -12.975 1.00 56.40 ? 3 DA B "C5'" 1
ATOM 249 C "C4'" . DA B 1 3 ? 37.444 20.071 -13.639 1.00 56.21 ? 3 DA B "C4'" 1
ATOM 250 O "O4'" . DA B 1 3 ? 38.534 20.866 -14.170 1.00 54.70 ? 3 DA B "O4'" 1
ATOM 251 C "C3'" . DA B 1 3 ? 38.104 19.083 -12.694 1.00 55.34 ? 3 DA B "C3'" 1
ATOM 252 O "O3'" . DA B 1 3 ? 37.337 17.921 -12.572 1.00 57.25 ? 3 DA B "O3'" 1
ATOM 253 C "C2'" . DA B 1 3 ? 39.375 18.792 -13.451 1.00 54.10 ? 3 DA B "C2'" 1
ATOM 254 C "C1'" . DA B 1 3 ? 39.748 20.183 -13.928 1.00 53.07 ? 3 DA B "C1'" 1
ATOM 255 N N9 . DA B 1 3 ? 40.649 20.920 -13.023 1.00 52.63 ? 3 DA B N9 1
ATOM 256 C C8 . DA B 1 3 ? 40.394 21.716 -11.934 1.00 50.50 ? 3 DA B C8 1
ATOM 257 N N7 . DA B 1 3 ? 41.487 22.196 -11.373 1.00 49.46 ? 3 DA B N7 1
ATOM 258 C C5 . DA B 1 3 ? 42.508 21.690 -12.160 1.00 49.45 ? 3 DA B C5 1
ATOM 259 C C6 . DA B 1 3 ? 43.921 21.810 -12.122 1.00 49.50 ? 3 DA B C6 1
ATOM 260 N N6 . DA B 1 3 ? 44.601 22.548 -11.232 1.00 49.45 ? 3 DA B N6 1
ATOM 261 N N1 . DA B 1 3 ? 44.615 21.135 -13.057 1.00 50.64 ? 3 DA B N1 1
ATOM 262 C C2 . DA B 1 3 ? 43.980 20.379 -13.973 1.00 51.00 ? 3 DA B C2 1
ATOM 263 N N3 . DA B 1 3 ? 42.661 20.206 -14.113 1.00 50.74 ? 3 DA B N3 1
ATOM 264 C C4 . DA B 1 3 ? 42.003 20.886 -13.163 1.00 49.98 ? 3 DA B C4 1
ATOM 265 P P . DC B 1 4 ? 37.524 16.927 -11.335 1.00 58.17 ? 4 DC B P 1
ATOM 266 O OP1 . DC B 1 4 ? 36.282 16.145 -11.342 1.00 58.44 ? 4 DC B OP1 1
ATOM 267 O OP2 . DC B 1 4 ? 37.943 17.594 -10.075 1.00 58.22 ? 4 DC B OP2 1
ATOM 268 O "O5'" . DC B 1 4 ? 38.772 16.040 -11.770 1.00 57.79 ? 4 DC B "O5'" 1
ATOM 269 C "C5'" . DC B 1 4 ? 38.725 15.243 -12.923 1.00 57.36 ? 4 DC B "C5'" 1
ATOM 270 C "C4'" . DC B 1 4 ? 40.139 14.943 -13.344 1.00 56.09 ? 4 DC B "C4'" 1
ATOM 271 O "O4'" . DC B 1 4 ? 40.806 16.209 -13.509 1.00 56.73 ? 4 DC B "O4'" 1
ATOM 272 C "C3'" . DC B 1 4 ? 41.009 14.229 -12.321 1.00 56.62 ? 4 DC B "C3'" 1
ATOM 273 O "O3'" . DC B 1 4 ? 40.834 12.828 -12.320 1.00 55.27 ? 4 DC B "O3'" 1
ATOM 274 C "C2'" . DC B 1 4 ? 42.383 14.565 -12.867 1.00 55.14 ? 4 DC B "C2'" 1
ATOM 275 C "C1'" . DC B 1 4 ? 42.181 16.023 -13.235 1.00 53.38 ? 4 DC B "C1'" 1
ATOM 276 N N1 . DC B 1 4 ? 42.645 17.000 -12.194 1.00 52.01 ? 4 DC B N1 1
ATOM 277 C C2 . DC B 1 4 ? 44.021 17.304 -12.155 1.00 49.61 ? 4 DC B C2 1
ATOM 278 O O2 . DC B 1 4 ? 44.797 16.763 -12.954 1.00 49.90 ? 4 DC B O2 1
ATOM 279 N N3 . DC B 1 4 ? 44.452 18.191 -11.242 1.00 48.44 ? 4 DC B N3 1
ATOM 280 C C4 . DC B 1 4 ? 43.609 18.759 -10.396 1.00 50.17 ? 4 DC B C4 1
ATOM 281 N N4 . DC B 1 4 ? 44.129 19.625 -9.531 1.00 50.20 ? 4 DC B N4 1
ATOM 282 C C5 . DC B 1 4 ? 42.206 18.474 -10.410 1.00 50.57 ? 4 DC B C5 1
ATOM 283 C C6 . DC B 1 4 ? 41.776 17.593 -11.323 1.00 50.84 ? 4 DC B C6 1
ATOM 284 P P . DG B 1 5 ? 41.196 12.034 -10.991 1.00 57.69 ? 5 DG B P 1
ATOM 285 O OP1 . DG B 1 5 ? 40.671 10.676 -11.187 1.00 59.85 ? 5 DG B OP1 1
ATOM 286 O OP2 . DG B 1 5 ? 40.806 12.781 -9.782 1.00 58.07 ? 5 DG B OP2 1
ATOM 287 O "O5'" . DG B 1 5 ? 42.793 11.960 -11.005 1.00 57.05 ? 5 DG B "O5'" 1
ATOM 288 C "C5'" . DG B 1 5 ? 43.474 11.038 -11.838 1.00 52.38 ? 5 DG B "C5'" 1
ATOM 289 C "C4'" . DG B 1 5 ? 44.957 11.103 -11.541 1.00 49.51 ? 5 DG B "C4'" 1
ATOM 290 O "O4'" . DG B 1 5 ? 45.298 12.468 -11.774 1.00 48.19 ? 5 DG B "O4'" 1
ATOM 291 C "C3'" . DG B 1 5 ? 45.447 10.889 -10.110 1.00 48.69 ? 5 DG B "C3'" 1
ATOM 292 O "O3'" . DG B 1 5 ? 45.610 9.524 -9.781 1.00 48.14 ? 5 DG B "O3'" 1
ATOM 293 C "C2'" . DG B 1 5 ? 46.802 11.554 -10.196 1.00 46.38 ? 5 DG B "C2'" 1
ATOM 294 C "C1'" . DG B 1 5 ? 46.421 12.789 -10.996 1.00 44.14 ? 5 DG B "C1'" 1
ATOM 295 N N9 . DG B 1 5 ? 46.049 13.971 -10.232 1.00 43.88 ? 5 DG B N9 1
ATOM 296 C C8 . DG B 1 5 ? 44.810 14.521 -10.003 1.00 41.15 ? 5 DG B C8 1
ATOM 297 N N7 . DG B 1 5 ? 44.870 15.581 -9.257 1.00 41.94 ? 5 DG B N7 1
ATOM 298 C C5 . DG B 1 5 ? 46.223 15.728 -8.978 1.00 40.92 ? 5 DG B C5 1
ATOM 299 C C6 . DG B 1 5 ? 46.922 16.685 -8.229 1.00 40.79 ? 5 DG B C6 1
ATOM 300 O O6 . DG B 1 5 ? 46.463 17.664 -7.637 1.00 42.68 ? 5 DG B O6 1
ATOM 301 N N1 . DG B 1 5 ? 48.294 16.422 -8.212 1.00 41.17 ? 5 DG B N1 1
ATOM 302 C C2 . DG B 1 5 ? 48.906 15.374 -8.837 1.00 41.56 ? 5 DG B C2 1
ATOM 303 N N2 . DG B 1 5 ? 50.232 15.248 -8.721 1.00 41.81 ? 5 DG B N2 1
ATOM 304 N N3 . DG B 1 5 ? 48.270 14.470 -9.550 1.00 42.60 ? 5 DG B N3 1
ATOM 305 C C4 . DG B 1 5 ? 46.948 14.735 -9.576 1.00 43.11 ? 5 DG B C4 1
ATOM 306 P P . DC B 1 6 ? 45.357 9.019 -8.296 1.00 50.12 ? 6 DC B P 1
ATOM 307 O OP1 . DC B 1 6 ? 45.322 7.559 -8.403 1.00 52.02 ? 6 DC B OP1 1
ATOM 308 O OP2 . DC B 1 6 ? 44.229 9.765 -7.674 1.00 51.67 ? 6 DC B OP2 1
ATOM 309 O "O5'" . DC B 1 6 ? 46.666 9.405 -7.496 1.00 48.24 ? 6 DC B "O5'" 1
ATOM 310 C "C5'" . DC B 1 6 ? 47.874 8.823 -7.887 1.00 46.86 ? 6 DC B "C5'" 1
ATOM 311 C "C4'" . DC B 1 6 ? 48.961 9.586 -7.190 1.00 43.98 ? 6 DC B "C4'" 1
ATOM 312 O "O4'" . DC B 1 6 ? 48.919 10.958 -7.596 1.00 44.77 ? 6 DC B "O4'" 1
ATOM 313 C "C3'" . DC B 1 6 ? 48.788 9.669 -5.700 1.00 44.66 ? 6 DC B "C3'" 1
ATOM 314 O "O3'" . DC B 1 6 ? 49.143 8.426 -5.126 1.00 46.05 ? 6 DC B "O3'" 1
ATOM 315 C "C2'" . DC B 1 6 ? 49.801 10.757 -5.439 1.00 43.07 ? 6 DC B "C2'" 1
ATOM 316 C "C1'" . DC B 1 6 ? 49.387 11.736 -6.532 1.00 43.29 ? 6 DC B "C1'" 1
ATOM 317 N N1 . DC B 1 6 ? 48.311 12.759 -6.194 1.00 41.67 ? 6 DC B N1 1
ATOM 318 C C2 . DC B 1 6 ? 48.688 13.868 -5.457 1.00 41.60 ? 6 DC B C2 1
ATOM 319 O O2 . DC B 1 6 ? 49.868 13.932 -5.099 1.00 40.24 ? 6 DC B O2 1
ATOM 320 N N3 . DC B 1 6 ? 47.751 14.818 -5.161 1.00 39.76 ? 6 DC B N3 1
ATOM 321 C C4 . DC B 1 6 ? 46.486 14.665 -5.569 1.00 41.09 ? 6 DC B C4 1
ATOM 322 N N4 . DC B 1 6 ? 45.618 15.634 -5.245 1.00 41.76 ? 6 DC B N4 1
ATOM 323 C C5 . DC B 1 6 ? 46.064 13.534 -6.332 1.00 41.21 ? 6 DC B C5 1
ATOM 324 C C6 . DC B 1 6 ? 47.010 12.634 -6.621 1.00 41.12 ? 6 DC B C6 1
ATOM 325 P P . DG B 1 7 ? 48.542 7.906 -3.739 1.00 46.60 ? 7 DG B P 1
ATOM 326 O OP1 . DG B 1 7 ? 49.074 6.562 -3.469 1.00 46.65 ? 7 DG B OP1 1
ATOM 327 O OP2 . DG B 1 7 ? 47.091 8.124 -3.671 1.00 48.71 ? 7 DG B OP2 1
ATOM 328 O "O5'" . DG B 1 7 ? 49.241 8.920 -2.742 1.00 47.13 ? 7 DG B "O5'" 1
ATOM 329 C "C5'" . DG B 1 7 ? 48.507 9.401 -1.668 1.00 46.74 ? 7 DG B "C5'" 1
ATOM 330 C "C4'" . DG B 1 7 ? 49.323 10.500 -1.049 1.00 46.67 ? 7 DG B "C4'" 1
ATOM 331 O "O4'" . DG B 1 7 ? 49.410 11.621 -1.971 1.00 46.29 ? 7 DG B "O4'" 1
ATOM 332 C "C3'" . DG B 1 7 ? 48.669 11.018 0.207 1.00 47.94 ? 7 DG B "C3'" 1
ATOM 333 O "O3'" . DG B 1 7 ? 49.085 10.176 1.269 1.00 48.35 ? 7 DG B "O3'" 1
ATOM 334 C "C2'" . DG B 1 7 ? 49.275 12.414 0.261 1.00 46.30 ? 7 DG B "C2'" 1
ATOM 335 C "C1'" . DG B 1 7 ? 49.203 12.808 -1.224 1.00 43.48 ? 7 DG B "C1'" 1
ATOM 336 N N9 . DG B 1 7 ? 47.941 13.442 -1.594 1.00 41.98 ? 7 DG B N9 1
ATOM 337 C C8 . DG B 1 7 ? 46.919 12.930 -2.358 1.00 40.41 ? 7 DG B C8 1
ATOM 338 N N7 . DG B 1 7 ? 45.921 13.753 -2.487 1.00 40.73 ? 7 DG B N7 1
ATOM 339 C C5 . DG B 1 7 ? 46.302 14.866 -1.768 1.00 40.14 ? 7 DG B C5 1
ATOM 340 C C6 . DG B 1 7 ? 45.607 16.085 -1.561 1.00 40.49 ? 7 DG B C6 1
ATOM 341 O O6 . DG B 1 7 ? 44.494 16.419 -1.981 1.00 42.91 ? 7 DG B O6 1
ATOM 342 N N1 . DG B 1 7 ? 46.326 16.957 -0.763 1.00 39.58 ? 7 DG B N1 1
ATOM 343 C C2 . DG B 1 7 ? 47.563 16.692 -0.244 1.00 40.12 ? 7 DG B C2 1
ATOM 344 N N2 . DG B 1 7 ? 48.088 17.665 0.505 1.00 40.65 ? 7 DG B N2 1
ATOM 345 N N3 . DG B 1 7 ? 48.237 15.559 -0.420 1.00 40.63 ? 7 DG B N3 1
ATOM 346 C C4 . DG B 1 7 ? 47.529 14.693 -1.199 1.00 40.83 ? 7 DG B C4 1
ATOM 347 P P . DT B 1 8 ? 48.091 9.856 2.467 1.00 49.55 ? 8 DT B P 1
ATOM 348 O OP1 . DT B 1 8 ? 48.861 9.046 3.404 1.00 49.36 ? 8 DT B OP1 1
ATOM 349 O OP2 . DT B 1 8 ? 46.727 9.458 2.008 1.00 50.22 ? 8 DT B OP2 1
ATOM 350 O "O5'" . DT B 1 8 ? 47.916 11.281 3.152 1.00 48.88 ? 8 DT B "O5'" 1
ATOM 351 C "C5'" . DT B 1 8 ? 48.984 11.783 3.948 1.00 47.04 ? 8 DT B "C5'" 1
ATOM 352 C "C4'" . DT B 1 8 ? 48.635 13.191 4.344 1.00 46.13 ? 8 DT B "C4'" 1
ATOM 353 O "O4'" . DT B 1 8 ? 48.306 13.925 3.152 1.00 46.91 ? 8 DT B "O4'" 1
ATOM 354 C "C3'" . DT B 1 8 ? 47.322 13.271 5.119 1.00 47.84 ? 8 DT B "C3'" 1
ATOM 355 O "O3'" . DT B 1 8 ? 47.531 12.869 6.453 1.00 47.85 ? 8 DT B "O3'" 1
ATOM 356 C "C2'" . DT B 1 8 ? 46.996 14.748 4.956 1.00 46.97 ? 8 DT B "C2'" 1
ATOM 357 C "C1'" . DT B 1 8 ? 47.334 14.910 3.481 1.00 46.28 ? 8 DT B "C1'" 1
ATOM 358 N N1 . DT B 1 8 ? 46.167 14.800 2.595 1.00 46.33 ? 8 DT B N1 1
ATOM 359 C C2 . DT B 1 8 ? 45.374 15.930 2.457 1.00 45.42 ? 8 DT B C2 1
ATOM 360 O O2 . DT B 1 8 ? 45.599 16.983 3.028 1.00 45.39 ? 8 DT B O2 1
ATOM 361 N N3 . DT B 1 8 ? 44.324 15.789 1.602 1.00 44.34 ? 8 DT B N3 1
ATOM 362 C C4 . DT B 1 8 ? 43.987 14.640 0.915 1.00 44.83 ? 8 DT B C4 1
ATOM 363 O O4 . DT B 1 8 ? 43.008 14.628 0.203 1.00 45.35 ? 8 DT B O4 1
ATOM 364 C C5 . DT B 1 8 ? 44.840 13.490 1.104 1.00 45.04 ? 8 DT B C5 1
ATOM 365 C C7 . DT B 1 8 ? 44.575 12.197 0.393 1.00 45.62 ? 8 DT B C7 1
ATOM 366 C C6 . DT B 1 8 ? 45.892 13.612 1.929 1.00 45.31 ? 8 DT B C6 1
HETATM 367 P P . XUA B 1 9 ? 46.297 12.586 7.407 1.00 49.73 ? 9 XUA B P 1
HETATM 368 N N1 . XUA B 1 9 ? 40.326 17.254 3.237 1.00 45.41 ? 9 XUA B N1 1
HETATM 369 C C2 . XUA B 1 9 ? 40.680 18.178 4.138 1.00 44.36 ? 9 XUA B C2 1
HETATM 370 N N3 . XUA B 1 9 ? 41.598 18.068 5.088 1.00 45.21 ? 9 XUA B N3 1
HETATM 371 C C4 . XUA B 1 9 ? 42.193 16.858 5.070 1.00 44.14 ? 9 XUA B C4 1
HETATM 372 C C5 . XUA B 1 9 ? 41.928 15.810 4.214 1.00 43.61 ? 9 XUA B C5 1
HETATM 373 C C6 . XUA B 1 9 ? 40.926 16.052 3.245 1.00 44.36 ? 9 XUA B C6 1
HETATM 374 N N6 . XUA B 1 9 ? 40.533 15.157 2.337 1.00 44.24 ? 9 XUA B N6 1
HETATM 375 N N7 . XUA B 1 9 ? 42.725 14.712 4.517 1.00 42.41 ? 9 XUA B N7 1
HETATM 376 C C8 . XUA B 1 9 ? 43.455 15.120 5.525 1.00 43.03 ? 9 XUA B C8 1
HETATM 377 N N9 . XUA B 1 9 ? 43.161 16.396 5.919 1.00 44.64 ? 9 XUA B N9 1
HETATM 378 C "C1'" . XUA B 1 9 ? 43.817 17.180 6.977 1.00 47.28 ? 9 XUA B "C1'" 1
HETATM 379 O OP1 . XUA B 1 9 ? 46.936 12.112 8.633 1.00 51.67 ? 9 XUA B OP1 1
HETATM 380 C "C2'" . XUA B 1 9 ? 43.136 17.132 8.328 1.00 50.99 ? 9 XUA B "C2'" 1
HETATM 381 SE "SE2'" . XUA B 1 9 ? 43.314 18.800 9.378 0.70 56.95 ? 9 XUA B "SE2'" 1
HETATM 382 O OP2 . XUA B 1 9 ? 45.276 11.764 6.725 1.00 47.55 ? 9 XUA B OP2 1
HETATM 383 C "C3'" . XUA B 1 9 ? 43.949 16.015 8.975 1.00 49.85 ? 9 XUA B "C3'" 1
HETATM 384 O "O3'" . XUA B 1 9 ? 43.864 16.121 10.364 1.00 50.03 ? 9 XUA B "O3'" 1
HETATM 385 C "C4'" . XUA B 1 9 ? 45.355 16.255 8.462 1.00 49.85 ? 9 XUA B "C4'" 1
HETATM 386 O "O4'" . XUA B 1 9 ? 45.147 16.688 7.113 1.00 48.27 ? 9 XUA B "O4'" 1
HETATM 387 C "C5'" . XUA B 1 9 ? 46.266 15.042 8.422 1.00 50.08 ? 9 XUA B "C5'" 1
HETATM 388 O "O5'" . XUA B 1 9 ? 45.677 14.052 7.588 1.00 49.97 ? 9 XUA B "O5'" 1
HETATM 389 C "CA'" . XUA B 1 9 ? 42.937 20.125 7.988 0.70 53.24 ? 9 XUA B "CA'" 1
ATOM 390 P P . DC B 1 10 ? 42.981 15.048 11.129 1.00 52.86 ? 10 DC B P 1
ATOM 391 O OP1 . DC B 1 10 ? 43.352 15.164 12.544 1.00 55.83 ? 10 DC B OP1 1
ATOM 392 O OP2 . DC B 1 10 ? 43.010 13.721 10.474 1.00 54.19 ? 10 DC B OP2 1
ATOM 393 O "O5'" . DC B 1 10 ? 41.504 15.585 10.955 1.00 49.49 ? 10 DC B "O5'" 1
ATOM 394 C "C5'" . DC B 1 10 ? 41.002 16.646 11.743 1.00 48.98 ? 10 DC B "C5'" 1
ATOM 395 C "C4'" . DC B 1 10 ? 39.752 17.202 11.102 1.00 48.45 ? 10 DC B "C4'" 1
ATOM 396 O "O4'" . DC B 1 10 ? 40.085 17.547 9.725 1.00 48.75 ? 10 DC B "O4'" 1
ATOM 397 C "C3'" . DC B 1 10 ? 38.602 16.222 10.957 1.00 47.25 ? 10 DC B "C3'" 1
ATOM 398 O "O3'" . DC B 1 10 ? 37.927 15.952 12.206 1.00 48.24 ? 10 DC B "O3'" 1
ATOM 399 C "C2'" . DC B 1 10 ? 37.810 17.015 9.914 1.00 47.20 ? 10 DC B "C2'" 1
ATOM 400 C "C1'" . DC B 1 10 ? 38.921 17.435 8.935 1.00 45.52 ? 10 DC B "C1'" 1
ATOM 401 N N1 . DC B 1 10 ? 39.063 16.433 7.807 1.00 44.69 ? 10 DC B N1 1
ATOM 402 C C2 . DC B 1 10 ? 38.277 16.614 6.646 1.00 45.96 ? 10 DC B C2 1
ATOM 403 O O2 . DC B 1 10 ? 37.527 17.608 6.559 1.00 46.96 ? 10 DC B O2 1
ATOM 404 N N3 . DC B 1 10 ? 38.364 15.705 5.640 1.00 42.37 ? 10 DC B N3 1
ATOM 405 C C4 . DC B 1 10 ? 39.134 14.634 5.771 1.00 41.77 ? 10 DC B C4 1
ATOM 406 N N4 . DC B 1 10 ? 39.153 13.769 4.772 1.00 42.83 ? 10 DC B N4 1
ATOM 407 C C5 . DC B 1 10 ? 39.930 14.419 6.932 1.00 42.57 ? 10 DC B C5 1
ATOM 408 C C6 . DC B 1 10 ? 39.854 15.323 7.916 1.00 43.10 ? 10 DC B C6 1
HETATM 409 MG MG . MG C 2 . ? 48.780 24.915 -6.960 1.00 59.23 ? 60 MG A MG 1
HETATM 410 MG MG . MG D 2 . ? 40.444 28.806 -7.722 1.00 65.15 ? 61 MG B MG 1
HETATM 411 MG MG . MG E 2 . ? 42.457 19.997 -5.990 0.50 51.09 ? 62 MG B MG 1
HETATM 412 O O . HOH F 3 . ? 56.733 18.145 -14.908 1.00 77.20 ? 11 HOH A O 1
HETATM 413 O O . HOH F 3 . ? 54.231 15.862 -10.052 1.00 69.90 ? 12 HOH A O 1
HETATM 414 O O . HOH F 3 . ? 48.376 24.656 -10.317 1.00 33.04 ? 13 HOH A O 1
HETATM 415 O O . HOH F 3 . ? 49.434 24.170 -15.364 1.00 42.48 ? 14 HOH A O 1
HETATM 416 O O . HOH F 3 . ? 41.929 18.215 -16.700 1.00 52.99 ? 15 HOH A O 1
HETATM 417 O O . HOH F 3 . ? 51.959 23.342 -15.484 1.00 49.41 ? 16 HOH A O 1
HETATM 418 O O . HOH F 3 . ? 46.740 26.949 -24.781 1.00 56.07 ? 17 HOH A O 1
HETATM 419 O O . HOH F 3 . ? 48.903 26.528 -16.714 1.00 43.25 ? 18 HOH A O 1
HETATM 420 O O . HOH F 3 . ? 52.553 22.790 -7.541 1.00 49.72 ? 19 HOH A O 1
HETATM 421 O O . HOH F 3 . ? 49.523 24.042 -19.424 1.00 46.84 ? 20 HOH A O 1
HETATM 422 O O . HOH F 3 . ? 50.068 27.372 1.989 1.00 67.21 ? 21 HOH A O 1
HETATM 423 O O . HOH F 3 . ? 48.669 25.792 -13.060 1.00 47.27 ? 24 HOH A O 1
HETATM 424 O O . HOH F 3 . ? 49.774 22.865 -8.167 1.00 51.38 ? 29 HOH A O 1
HETATM 425 O O . HOH F 3 . ? 34.850 26.827 -1.541 1.00 59.79 ? 33 HOH A O 1
HETATM 426 O O . HOH F 3 . ? 46.096 22.243 -3.821 1.00 48.67 ? 34 HOH A O 1
HETATM 427 O O . HOH F 3 . ? 39.316 19.157 -2.668 1.00 45.14 ? 35 HOH A O 1
HETATM 428 O O . HOH F 3 . ? 41.981 20.646 -4.006 1.00 52.56 ? 36 HOH A O 1
HETATM 429 O O . HOH F 3 . ? 53.308 14.610 -7.931 1.00 45.42 ? 37 HOH A O 1
HETATM 430 O O . HOH F 3 . ? 50.316 26.125 -6.939 1.00 65.33 ? 38 HOH A O 1
HETATM 431 O O . HOH F 3 . ? 37.846 28.386 0.260 1.00 57.09 ? 39 HOH A O 1
HETATM 432 O O . HOH F 3 . ? 39.006 28.522 -3.087 1.00 63.77 ? 40 HOH A O 1
HETATM 433 O O . HOH F 3 . ? 39.961 28.937 2.242 1.00 66.82 ? 41 HOH A O 1
HETATM 434 O O . HOH F 3 . ? 47.190 16.071 -18.339 1.00 59.27 ? 42 HOH A O 1
HETATM 435 O O . HOH F 3 . ? 49.673 15.753 -19.221 1.00 47.48 ? 43 HOH A O 1
HETATM 436 O O . HOH F 3 . ? 47.589 22.716 -5.963 1.00 50.71 ? 45 HOH A O 1
HETATM 437 O O . HOH F 3 . ? 46.204 17.137 -16.394 1.00 49.17 ? 46 HOH A O 1
HETATM 438 O O . HOH F 3 . ? 40.159 16.546 -3.633 1.00 49.91 ? 47 HOH A O 1
HETATM 439 O O . HOH F 3 . ? 32.276 12.638 -2.637 1.00 58.38 ? 49 HOH A O 1
HETATM 440 O O . HOH F 3 . ? 49.534 23.761 -3.900 1.00 53.67 ? 51 HOH A O 1
HETATM 441 O O . HOH F 3 . ? 40.683 18.704 -5.579 1.00 62.22 ? 52 HOH A O 1
HETATM 442 O O . HOH F 3 . ? 48.665 20.188 3.192 1.00 65.24 ? 54 HOH A O 1
HETATM 443 O O . HOH F 3 . ? 43.936 17.520 -17.576 1.00 46.35 ? 56 HOH A O 1
HETATM 444 O O . HOH F 3 . ? 37.191 20.092 -3.679 1.00 60.17 ? 58 HOH A O 1
HETATM 445 O O . HOH F 3 . ? 35.893 12.663 -0.921 1.00 52.28 ? 59 HOH A O 1
HETATM 446 O O . HOH G 3 . ? 41.612 12.941 -1.348 1.00 29.22 ? 11 HOH B O 1
HETATM 447 O O . HOH G 3 . ? 42.427 12.441 3.580 1.00 44.63 ? 12 HOH B O 1
HETATM 448 O O . HOH G 3 . ? 44.597 10.335 3.412 1.00 54.98 ? 14 HOH B O 1
HETATM 449 O O . HOH G 3 . ? 44.642 18.986 -5.847 1.00 41.43 ? 15 HOH B O 1
HETATM 450 O O . HOH G 3 . ? 43.848 12.466 -3.554 1.00 41.62 ? 16 HOH B O 1
HETATM 451 O O . HOH G 3 . ? 51.680 8.986 3.784 1.00 53.24 ? 17 HOH B O 1
HETATM 452 O O . HOH G 3 . ? 42.868 12.299 7.743 1.00 45.23 ? 18 HOH B O 1
HETATM 453 O O . HOH G 3 . ? 42.898 12.315 -7.598 1.00 42.92 ? 19 HOH B O 1
HETATM 454 O O . HOH G 3 . ? 38.162 28.216 -16.559 1.00 46.06 ? 20 HOH B O 1
HETATM 455 O O . HOH G 3 . ? 45.301 10.128 -4.057 1.00 47.12 ? 21 HOH B O 1
HETATM 456 O O . HOH G 3 . ? 41.657 12.292 -4.948 1.00 48.53 ? 22 HOH B O 1
HETATM 457 O O . HOH G 3 . ? 42.642 14.449 -5.914 1.00 51.87 ? 23 HOH B O 1
HETATM 458 O O . HOH G 3 . ? 40.694 10.125 7.560 1.00 60.84 ? 25 HOH B O 1
HETATM 459 O O . HOH G 3 . ? 40.744 11.873 1.614 1.00 53.52 ? 26 HOH B O 1
HETATM 460 O O . HOH G 3 . ? 43.575 32.710 -9.417 1.00 61.25 ? 27 HOH B O 1
HETATM 461 O O . HOH G 3 . ? 42.561 16.172 -7.685 1.00 48.57 ? 28 HOH B O 1
HETATM 462 O O . HOH G 3 . ? 48.308 8.432 6.157 1.00 55.91 ? 30 HOH B O 1
HETATM 463 O O . HOH G 3 . ? 37.064 28.324 -14.380 1.00 74.77 ? 31 HOH B O 1
HETATM 464 O O . HOH G 3 . ? 45.885 26.146 -10.223 1.00 49.00 ? 32 HOH B O 1
HETATM 465 O O . HOH G 3 . ? 32.778 19.827 -12.302 1.00 57.78 ? 44 HOH B O 1
HETATM 466 O O . HOH G 3 . ? 47.768 28.453 -13.292 1.00 52.38 ? 48 HOH B O 1
HETATM 467 O O . HOH G 3 . ? 42.329 15.286 -3.440 1.00 53.36 ? 50 HOH B O 1
HETATM 468 O O . HOH G 3 . ? 45.491 14.770 -14.754 1.00 61.23 ? 53 HOH B O 1
HETATM 469 O O . HOH G 3 . ? 45.786 9.172 6.418 1.00 62.21 ? 55 HOH B O 1
HETATM 470 O O . HOH G 3 . ? 45.323 10.405 10.749 1.00 66.68 ? 57 HOH B O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG G A . n
A 1 2 DT 2 2 2 DT T A . n
A 1 3 DA 3 3 3 DA A A . n
A 1 4 DC 4 4 4 DC C A . n
A 1 5 DG 5 5 5 DG G A . n
A 1 6 DC 6 6 6 DC C A . n
A 1 7 DG 7 7 7 DG G A . n
A 1 8 DT 8 8 8 DT T A . n
A 1 9 XUA 9 9 9 XUA XUA A . n
A 1 10 DC 10 10 10 DC C A . n
B 1 1 DG 1 1 1 DG G B . n
B 1 2 DT 2 2 2 DT T B . n
B 1 3 DA 3 3 3 DA A B . n
B 1 4 DC 4 4 4 DC C B . n
B 1 5 DG 5 5 5 DG G B . n
B 1 6 DC 6 6 6 DC C B . n
B 1 7 DG 7 7 7 DG G B . n
B 1 8 DT 8 8 8 DT T B . n
B 1 9 XUA 9 9 9 XUA XUA B . n
B 1 10 DC 10 10 10 DC C B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG 1 60 60 MG MG A .
D 2 MG 1 61 61 MG MG B .
E 2 MG 1 62 62 MG MG B .
F 3 HOH 1 11 11 HOH HOH A .
F 3 HOH 2 12 12 HOH HOH A .
F 3 HOH 3 13 2 HOH HOH A .
F 3 HOH 4 14 3 HOH HOH A .
F 3 HOH 5 15 13 HOH HOH A .
F 3 HOH 6 16 16 HOH HOH A .
F 3 HOH 7 17 17 HOH HOH A .
F 3 HOH 8 18 18 HOH HOH A .
F 3 HOH 9 19 6 HOH HOH A .
F 3 HOH 10 20 10 HOH HOH A .
F 3 HOH 11 21 21 HOH HOH A .
F 3 HOH 12 24 24 HOH HOH A .
F 3 HOH 13 29 29 HOH HOH A .
F 3 HOH 14 33 33 HOH HOH A .
F 3 HOH 15 34 34 HOH HOH A .
F 3 HOH 16 35 35 HOH HOH A .
F 3 HOH 17 36 36 HOH HOH A .
F 3 HOH 18 37 37 HOH HOH A .
F 3 HOH 19 38 38 HOH HOH A .
F 3 HOH 20 39 39 HOH HOH A .
F 3 HOH 21 40 40 HOH HOH A .
F 3 HOH 22 41 41 HOH HOH A .
F 3 HOH 23 42 42 HOH HOH A .
F 3 HOH 24 43 43 HOH HOH A .
F 3 HOH 25 45 45 HOH HOH A .
F 3 HOH 26 46 46 HOH HOH A .
F 3 HOH 27 47 47 HOH HOH A .
F 3 HOH 28 49 49 HOH HOH A .
F 3 HOH 29 51 51 HOH HOH A .
F 3 HOH 30 52 52 HOH HOH A .
F 3 HOH 31 54 54 HOH HOH A .
F 3 HOH 32 56 56 HOH HOH A .
F 3 HOH 33 58 58 HOH HOH A .
F 3 HOH 34 59 59 HOH HOH A .
G 3 HOH 1 11 1 HOH HOH B .
G 3 HOH 2 12 4 HOH HOH B .
G 3 HOH 3 14 14 HOH HOH B .
G 3 HOH 4 15 15 HOH HOH B .
G 3 HOH 5 16 7 HOH HOH B .
G 3 HOH 6 17 8 HOH HOH B .
G 3 HOH 7 18 9 HOH HOH B .
G 3 HOH 8 19 19 HOH HOH B .
G 3 HOH 9 20 20 HOH HOH B .
G 3 HOH 10 21 5 HOH HOH B .
G 3 HOH 11 22 22 HOH HOH B .
G 3 HOH 12 23 23 HOH HOH B .
G 3 HOH 13 25 25 HOH HOH B .
G 3 HOH 14 26 26 HOH HOH B .
G 3 HOH 15 27 27 HOH HOH B .
G 3 HOH 16 28 28 HOH HOH B .
G 3 HOH 17 30 30 HOH HOH B .
G 3 HOH 18 31 31 HOH HOH B .
G 3 HOH 19 32 32 HOH HOH B .
G 3 HOH 20 44 44 HOH HOH B .
G 3 HOH 21 48 48 HOH HOH B .
G 3 HOH 22 50 50 HOH HOH B .
G 3 HOH 23 53 53 HOH HOH B .
G 3 HOH 24 55 55 HOH HOH B .
G 3 HOH 25 57 57 HOH HOH B .
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A XUA 9 A XUA 9 ? DA ?
2 B XUA 9 B XUA 9 ? DA ?
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1190 ?
1 MORE -22 ?
1 'SSA (A^2)' 3840 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? F HOH . ? A HOH 36 ? 1_555 MG ? E MG . ? B MG 62 ? 1_555 O ? F HOH . ? A HOH 52 ? 1_555 80.1 ?
2 O ? F HOH . ? A HOH 36 ? 1_555 MG ? E MG . ? B MG 62 ? 1_555 O ? G HOH . ? B HOH 15 ? 1_555 105.9 ?
3 O ? F HOH . ? A HOH 52 ? 1_555 MG ? E MG . ? B MG 62 ? 1_555 O ? G HOH . ? B HOH 15 ? 1_555 117.8 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2009-08-11
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2023-09-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' Advisory
2 2 'Structure model' 'Version format compliance'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
6 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' pdbx_struct_conn_angle
6 3 'Structure model' struct_conn
7 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
9 3 'Structure model' '_pdbx_struct_conn_angle.value'
10 3 'Structure model' '_struct_conn.pdbx_dist_value'
11 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
12 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
13 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
14 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
15 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
16 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
17 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
18 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
19 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
20 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
21 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
22 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
23 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
24 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
25 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
26 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
27 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
loop_
_pdbx_refine_tls.pdbx_refine_id
_pdbx_refine_tls.id
_pdbx_refine_tls.details
_pdbx_refine_tls.method
_pdbx_refine_tls.origin_x
_pdbx_refine_tls.origin_y
_pdbx_refine_tls.origin_z
_pdbx_refine_tls.T[1][1]
_pdbx_refine_tls.T[2][2]
_pdbx_refine_tls.T[3][3]
_pdbx_refine_tls.T[1][2]
_pdbx_refine_tls.T[1][3]
_pdbx_refine_tls.T[2][3]
_pdbx_refine_tls.L[1][1]
_pdbx_refine_tls.L[2][2]
_pdbx_refine_tls.L[3][3]
_pdbx_refine_tls.L[1][2]
_pdbx_refine_tls.L[1][3]
_pdbx_refine_tls.L[2][3]
_pdbx_refine_tls.S[1][1]
_pdbx_refine_tls.S[1][2]
_pdbx_refine_tls.S[1][3]
_pdbx_refine_tls.S[2][1]
_pdbx_refine_tls.S[2][2]
_pdbx_refine_tls.S[2][3]
_pdbx_refine_tls.S[3][1]
_pdbx_refine_tls.S[3][2]
_pdbx_refine_tls.S[3][3]
'X-RAY DIFFRACTION' 1 ? refined 45.2940 20.8634 -7.0739 -0.2359 -0.1361 -0.0505 0.0411 0.0055 0.0534 1.4022 4.3694 11.0897 -0.0025
-2.6631 -3.8025 0.2482 -0.2563 0.0135 -0.5393 -0.1926 0.3595 0.0968 0.2739 -0.0556
'X-RAY DIFFRACTION' 2 ? refined 43.3207 17.4524 -4.7144 -0.2057 -0.2006 -0.0492 0.0694 0.0347 0.0280 3.9920 2.2201 10.4544 1.6166
-2.2780 -4.1950 0.2343 -0.5028 0.2514 -0.3318 -0.2022 0.1854 0.2545 0.3123 -0.0321
#
loop_
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.selection
_pdbx_refine_tls_group.selection_details
'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 10 ? ? ? ?
'X-RAY DIFFRACTION' 2 2 B 1 ? ? B 10 ? ? ? ?
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
CBASS 'data collection' . ? 1
PHASES phasing . ? 2
REFMAC refinement 5.2.0019 ? 3
HKL-2000 'data reduction' . ? 4
HKL-2000 'data scaling' . ? 5
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.30 108.30 3.00 0.30 N
2 1 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.11 122.90 -3.79 0.60 N
3 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 111.74 108.30 3.44 0.30 N
4 1 "O4'" A DC 4 ? ? "C4'" A DC 4 ? ? "C3'" A DC 4 ? ? 101.78 104.50 -2.72 0.40 N
5 1 "O4'" A DG 5 ? ? "C4'" A DG 5 ? ? "C3'" A DG 5 ? ? 101.46 104.50 -3.04 0.40 N
6 1 "O4'" A DC 6 ? ? "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? 101.85 104.50 -2.65 0.40 N
7 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.23 108.30 2.93 0.30 N
8 1 "O4'" A DT 8 ? ? "C4'" A DT 8 ? ? "C3'" A DT 8 ? ? 101.08 104.50 -3.42 0.40 N
9 1 "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.63 102.20 -4.57 0.70 N
10 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 112.70 108.30 4.40 0.30 N
11 1 "O5'" B DT 2 ? ? "C5'" B DT 2 ? ? "C4'" B DT 2 ? ? 104.44 109.40 -4.96 0.80 N
12 1 "O4'" B DT 2 ? ? "C4'" B DT 2 ? ? "C3'" B DT 2 ? ? 100.54 104.50 -3.96 0.40 N
13 1 "O4'" B DT 2 ? ? "C1'" B DT 2 ? ? N1 B DT 2 ? ? 110.36 108.30 2.06 0.30 N
14 1 "O4'" B DA 3 ? ? "C1'" B DA 3 ? ? N9 B DA 3 ? ? 112.85 108.30 4.55 0.30 N
15 1 "O4'" B DC 4 ? ? "C1'" B DC 4 ? ? N1 B DC 4 ? ? 110.44 108.30 2.14 0.30 N
16 1 "C4'" B DC 6 ? ? "C3'" B DC 6 ? ? "C2'" B DC 6 ? ? 97.70 102.20 -4.50 0.70 N
17 1 "O4'" B DG 7 ? ? "C1'" B DG 7 ? ? N9 B DG 7 ? ? 110.87 108.30 2.57 0.30 N
18 1 "O4'" B DT 8 ? ? "C4'" B DT 8 ? ? "C3'" B DT 8 ? ? 101.38 104.50 -3.12 0.40 N
19 1 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.57 108.30 2.27 0.30 N
20 1 "C4'" B DC 10 ? ? "C3'" B DC 10 ? ? "C2'" B DC 10 ? ? 97.04 102.20 -5.16 0.70 N
21 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 113.07 108.30 4.77 0.30 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
MG MG MG N N 147
XUA P P N N 148
XUA N1 N Y N 149
XUA C2 C Y N 150
XUA N3 N Y N 151
XUA C4 C Y N 152
XUA C5 C Y N 153
XUA C6 C Y N 154
XUA N6 N N N 155
XUA N7 N Y N 156
XUA C8 C Y N 157
XUA N9 N Y N 158
XUA "C1'" C N R 159
XUA OP1 O N N 160
XUA "C2'" C N R 161
XUA "SE2'" SE N N 162
XUA OP2 O N N 163
XUA "C3'" C N R 164
XUA "O3'" O N N 165
XUA OP3 O N N 166
XUA "C4'" C N R 167
XUA "O4'" O N N 168
XUA "C5'" C N N 169
XUA "O5'" O N N 170
XUA "CA'" C N N 171
XUA H2 H N N 172
XUA HN6 H N N 173
XUA HN6A H N N 174
XUA H8 H N N 175
XUA "H1'" H N N 176
XUA "H2'" H N N 177
XUA HOP2 H N N 178
XUA "H3'" H N N 179
XUA "HO3'" H N N 180
XUA HOP3 H N N 181
XUA "H4'" H N N 182
XUA "H5'" H N N 183
XUA "H5''" H N N 184
XUA HA1 H N N 185
XUA HA2 H N N 186
XUA HA3 H N N 187
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
XUA OP1 P doub N N 152
XUA "O5'" P sing N N 153
XUA P OP2 sing N N 154
XUA P OP3 sing N N 155
XUA C2 N1 doub Y N 156
XUA C6 N1 sing Y N 157
XUA N3 C2 sing Y N 158
XUA C2 H2 sing N N 159
XUA N3 C4 doub Y N 160
XUA N9 C4 sing Y N 161
XUA C4 C5 sing Y N 162
XUA N7 C5 sing Y N 163
XUA C5 C6 doub Y N 164
XUA C6 N6 sing N N 165
XUA N6 HN6 sing N N 166
XUA N6 HN6A sing N N 167
XUA C8 N7 doub Y N 168
XUA N9 C8 sing Y N 169
XUA C8 H8 sing N N 170
XUA "C1'" N9 sing N N 171
XUA "C2'" "C1'" sing N N 172
XUA "O4'" "C1'" sing N N 173
XUA "C1'" "H1'" sing N N 174
XUA "SE2'" "C2'" sing N N 175
XUA "C3'" "C2'" sing N N 176
XUA "C2'" "H2'" sing N N 177
XUA "SE2'" "CA'" sing N N 178
XUA OP2 HOP2 sing N N 179
XUA "O3'" "C3'" sing N N 180
XUA "C3'" "C4'" sing N N 181
XUA "C3'" "H3'" sing N N 182
XUA "O3'" "HO3'" sing N N 183
XUA OP3 HOP3 sing N N 184
XUA "C4'" "C5'" sing N N 185
XUA "C4'" "O4'" sing N N 186
XUA "C4'" "H4'" sing N N 187
XUA "C5'" "O5'" sing N N 188
XUA "C5'" "H5'" sing N N 189
XUA "C5'" "H5''" sing N N 190
XUA "CA'" HA1 sing N N 191
XUA "CA'" HA2 sing N N 192
XUA "CA'" HA3 sing N N 193
#
_ndb_struct_conf_na.entry_id 3IFF
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 B DC 10 1_555 -0.437 -0.022 -0.146 -14.005 -7.257 0.245 1 A_DG1:DC10_B A 1 ? B 10 ? 19 1
1 A DT 2 1_555 B XUA 9 1_555 -0.032 -0.027 0.006 -0.206 -11.722 5.291 2 A_DT2:XUA9_B A 2 ? B 9 ? 20 1
1 A DA 3 1_555 B DT 8 1_555 0.178 -0.211 0.137 3.756 -11.413 5.952 3 A_DA3:DT8_B A 3 ? B 8 ? 20 1
1 A DC 4 1_555 B DG 7 1_555 0.418 -0.258 -0.045 11.439 -18.884 0.472 4 A_DC4:DG7_B A 4 ? B 7 ? 19 1
1 A DG 5 1_555 B DC 6 1_555 -0.219 -0.166 0.169 2.411 -12.782 -2.089 5 A_DG5:DC6_B A 5 ? B 6 ? 19 1
1 A DC 6 1_555 B DG 5 1_555 0.295 -0.147 0.221 -3.610 -13.434 -0.441 6 A_DC6:DG5_B A 6 ? B 5 ? 19 1
1 A DG 7 1_555 B DC 4 1_555 -0.220 -0.239 -0.031 -9.183 -18.388 -2.153 7 A_DG7:DC4_B A 7 ? B 4 ? 19 1
1 A DT 8 1_555 B DA 3 1_555 -0.179 -0.168 0.176 -5.326 -12.268 8.294 8 A_DT8:DA3_B A 8 ? B 3 ? 20 1
1 A XUA 9 1_555 B DT 2 1_555 0.096 -0.100 0.000 -0.199 -12.598 6.164 9 A_XUA9:DT2_B A 9 ? B 2 ? 20 1
1 A DC 10 1_555 B DG 1 1_555 0.509 -0.139 -0.144 14.063 -7.626 0.447 10 A_DC10:DG1_B A 10 ? B 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 B DC 10 1_555 A DT 2 1_555 B XUA 9 1_555 0.071 -0.926 3.047 -0.319 8.887 29.445 -3.302 -0.191 2.659 17.002
0.611 30.730 1 AA_DG1DT2:XUA9DC10_BB A 1 ? B 10 ? A 2 ? B 9 ?
1 A DT 2 1_555 B XUA 9 1_555 A DA 3 1_555 B DT 8 1_555 0.198 -1.024 3.098 -1.245 9.512 33.576 -3.015 -0.501 2.708 16.062
2.102 34.882 2 AA_DT2DA3:DT8XUA9_BB A 2 ? B 9 ? A 3 ? B 8 ?
1 A DA 3 1_555 B DT 8 1_555 A DC 4 1_555 B DG 7 1_555 -0.452 -1.176 3.093 -0.174 4.517 32.488 -2.799 0.774 2.910 8.025
0.309 32.792 3 AA_DA3DC4:DG7DT8_BB A 3 ? B 8 ? A 4 ? B 7 ?
1 A DC 4 1_555 B DG 7 1_555 A DG 5 1_555 B DC 6 1_555 -0.864 -1.819 3.322 -6.339 16.719 26.949 -5.940 0.545 2.029 31.814
12.063 32.249 4 AA_DC4DG5:DC6DG7_BB A 4 ? B 7 ? A 5 ? B 6 ?
1 A DG 5 1_555 B DC 6 1_555 A DC 6 1_555 B DG 5 1_555 0.000 -1.528 3.419 -0.093 6.995 37.341 -3.244 -0.012 3.094 10.808
0.144 37.968 5 AA_DG5DC6:DG5DC6_BB A 5 ? B 6 ? A 6 ? B 5 ?
1 A DC 6 1_555 B DG 5 1_555 A DG 7 1_555 B DC 4 1_555 0.705 -1.877 3.195 6.090 16.064 27.683 -5.758 -0.348 1.951 30.172
-11.439 32.492 6 AA_DC6DG7:DC4DG5_BB A 6 ? B 5 ? A 7 ? B 4 ?
1 A DG 7 1_555 B DC 4 1_555 A DT 8 1_555 B DA 3 1_555 0.521 -1.235 3.211 0.074 4.638 30.258 -3.214 -0.973 2.994 8.819
-0.140 30.603 7 AA_DG7DT8:DA3DC4_BB A 7 ? B 4 ? A 8 ? B 3 ?
1 A DT 8 1_555 B DA 3 1_555 A XUA 9 1_555 B DT 2 1_555 -0.175 -1.052 3.046 1.547 9.220 34.703 -2.881 0.481 2.678 15.120
-2.537 35.903 8 AA_DT8XUA9:DT2DA3_BB A 8 ? B 3 ? A 9 ? B 2 ?
1 A XUA 9 1_555 B DT 2 1_555 A DC 10 1_555 B DG 1 1_555 -0.064 -0.977 2.991 -0.106 8.286 29.212 -3.326 0.105 2.622 16.026
0.204 30.340 9 AA_XUA9DC10:DG1DT2_BB A 9 ? B 2 ? A 10 ? B 1 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 395D
_pdbx_initial_refinement_model.details ?
#