data_3GSJ
#
_entry.id 3GSJ
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3GSJ pdb_00003gsj 10.2210/pdb3gsj/pdb
NDB DD0108 ? ?
RCSB RCSB052255 ? ?
WWPDB D_1000052255 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2009-05-19
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2018-02-14
4 'Structure model' 1 3 2024-02-21
5 'Structure model' 1 4 2024-03-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Experimental preparation'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 5 'Structure model' 'Source and taxonomy'
7 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' exptl_crystal_grow
2 4 'Structure model' chem_comp_atom
3 4 'Structure model' chem_comp_bond
4 4 'Structure model' database_2
5 4 'Structure model' struct_conn
6 4 'Structure model' struct_site
7 5 'Structure model' entity
8 5 'Structure model' pdbx_entity_src_syn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_exptl_crystal_grow.pdbx_details'
2 3 'Structure model' '_exptl_crystal_grow.temp'
3 4 'Structure model' '_database_2.pdbx_DOI'
4 4 'Structure model' '_database_2.pdbx_database_accession'
5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
7 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
8 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
12 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
15 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
16 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
17 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
18 5 'Structure model' '_entity.details'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3GSJ
_pdbx_database_status.recvd_initial_deposition_date 2009-03-27
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 2o1i . unspecified
PDB 3GSK . unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Zeglis, B.M.' 1
'Pierre, V.C.' 2
'Kaiser, J.T.' 3
'Barton, J.K.' 4
#
_citation.id primary
_citation.title
'A bulky rhodium complex bound to an adenosine-adenosine DNA mismatch: general architecture of the metalloinsertion binding mode'
_citation.journal_abbrev Biochemistry
_citation.journal_volume 48
_citation.page_first 4247
_citation.page_last 4253
_citation.year 2009
_citation.journal_id_ASTM BICHAW
_citation.country US
_citation.journal_id_ISSN 0006-2960
_citation.journal_id_CSD 0033
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 19374348
_citation.pdbx_database_id_DOI 10.1021/bi900194e
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Zeglis, B.M.' 1 ?
primary 'Pierre, V.C.' 2 ?
primary 'Kaiser, J.T.' 3 ?
primary 'Barton, J.K.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*CP*GP*GP*AP*AP*AP*TP*TP*AP*CP*CP*G)-3'" 3671.418 1 ? ? ?
?
2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ?
ORGANOMETALLIC
3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ?
?
4 non-polymer syn "bis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)[chrysene-5,6-diiminato(2-)-kappa~2~N,N']rhodium(4+)" 669.559 2 ? ? ?
?
5 water nat water 18.015 63 ? ? ?
?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DG)(DA)(DA)(DA)(DT)(DT)(DA)(DC)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGGAAATTACCG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'SODIUM ION' NA
3 'CHLORIDE ION' CL
4 "bis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)[chrysene-5,6-diiminato(2-)-kappa~2~N,N']rhodium(4+)" R1C
5 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DG n
1 4 DA n
1 5 DA n
1 6 DA n
1 7 DT n
1 8 DT n
1 9 DA n
1 10 DC n
1 11 DC n
1 12 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'Synthetic DNA'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ?
'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ?
'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990
R1C non-polymer . "bis(2,2'-bipyridine-kappa~2~N~1~,N~1'~)[chrysene-5,6-diiminato(2-)-kappa~2~N,N']rhodium(4+)"
;DELTA-Rhodium(III)- bis-(2,2'-bipyridyl)-5,6-chrysenequinone diimine
;
'C38 H26 N6 Rh 4' 669.559
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DA 5 5 5 DA A A . n
A 1 6 DA 6 6 6 DA A A . n
A 1 7 DT 7 7 7 DT T A . n
A 1 8 DT 8 8 8 DT T A . n
A 1 9 DA 9 9 9 DA A A . n
A 1 10 DC 10 10 10 DC C A . n
A 1 11 DC 11 11 11 DC C A . n
A 1 12 DG 12 12 12 DG G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA 1 1002 1002 NA NA A .
C 3 CL 1 1003 1003 CL CL A .
D 4 R1C 1 2001 2001 R1C R1C A .
E 4 R1C 1 2002 2002 R1C R1C A .
F 5 HOH 1 13 13 HOH HOH A .
F 5 HOH 2 14 14 HOH HOH A .
F 5 HOH 3 15 15 HOH HOH A .
F 5 HOH 4 16 16 HOH HOH A .
F 5 HOH 5 17 17 HOH HOH A .
F 5 HOH 6 18 18 HOH HOH A .
F 5 HOH 7 19 19 HOH HOH A .
F 5 HOH 8 20 20 HOH HOH A .
F 5 HOH 9 21 21 HOH HOH A .
F 5 HOH 10 22 22 HOH HOH A .
F 5 HOH 11 23 23 HOH HOH A .
F 5 HOH 12 24 24 HOH HOH A .
F 5 HOH 13 25 25 HOH HOH A .
F 5 HOH 14 26 26 HOH HOH A .
F 5 HOH 15 27 27 HOH HOH A .
F 5 HOH 16 28 28 HOH HOH A .
F 5 HOH 17 29 29 HOH HOH A .
F 5 HOH 18 30 30 HOH HOH A .
F 5 HOH 19 31 31 HOH HOH A .
F 5 HOH 20 32 32 HOH HOH A .
F 5 HOH 21 33 33 HOH HOH A .
F 5 HOH 22 34 34 HOH HOH A .
F 5 HOH 23 35 35 HOH HOH A .
F 5 HOH 24 36 36 HOH HOH A .
F 5 HOH 25 37 37 HOH HOH A .
F 5 HOH 26 38 38 HOH HOH A .
F 5 HOH 27 39 39 HOH HOH A .
F 5 HOH 28 40 40 HOH HOH A .
F 5 HOH 29 41 41 HOH HOH A .
F 5 HOH 30 42 42 HOH HOH A .
F 5 HOH 31 43 43 HOH HOH A .
F 5 HOH 32 44 44 HOH HOH A .
F 5 HOH 33 45 45 HOH HOH A .
F 5 HOH 34 46 46 HOH HOH A .
F 5 HOH 35 47 47 HOH HOH A .
F 5 HOH 36 48 48 HOH HOH A .
F 5 HOH 37 49 49 HOH HOH A .
F 5 HOH 38 50 50 HOH HOH A .
F 5 HOH 39 51 51 HOH HOH A .
F 5 HOH 40 52 52 HOH HOH A .
F 5 HOH 41 53 53 HOH HOH A .
F 5 HOH 42 54 54 HOH HOH A .
F 5 HOH 43 55 55 HOH HOH A .
F 5 HOH 44 56 56 HOH HOH A .
F 5 HOH 45 57 57 HOH HOH A .
F 5 HOH 46 58 58 HOH HOH A .
F 5 HOH 47 59 59 HOH HOH A .
F 5 HOH 48 60 60 HOH HOH A .
F 5 HOH 49 61 61 HOH HOH A .
F 5 HOH 50 62 62 HOH HOH A .
F 5 HOH 51 63 63 HOH HOH A .
F 5 HOH 52 64 1 HOH HOH A .
F 5 HOH 53 65 2 HOH HOH A .
F 5 HOH 54 66 3 HOH HOH A .
F 5 HOH 55 67 4 HOH HOH A .
F 5 HOH 56 68 5 HOH HOH A .
F 5 HOH 57 69 6 HOH HOH A .
F 5 HOH 58 70 7 HOH HOH A .
F 5 HOH 59 71 8 HOH HOH A .
F 5 HOH 60 72 9 HOH HOH A .
F 5 HOH 61 73 10 HOH HOH A .
F 5 HOH 62 74 11 HOH HOH A .
F 5 HOH 63 75 12 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
_software.date
_software.type
_software.location
_software.language
Blu-Ice 'data collection' . ? 1 ? ? ? ?
SHELXD phasing . ? 2 ? ? ? ?
REFMAC refinement 5.2.0019 ? 3 ? ? ? ?
MOSFLM 'data reduction' . ? 4 ? ? ? ?
SCALA 'data scaling' . ? 5 ? ? ? ?
#
_cell.entry_id 3GSJ
_cell.length_a 39.020
_cell.length_b 39.020
_cell.length_c 57.420
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3GSJ
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3GSJ
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.98
_exptl_crystal.density_percent_sol 58.68
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION'
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7
_exptl_crystal_grow.pdbx_details '20 mM sodium cacodylate, 6 mM spermine, 4HCl, 40 mM KCl, 5% MPD, pH 7, VAPOR DIFFUSION'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IV'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details mirrors
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RUH3R'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.5418
#
_reflns.entry_id 3GSJ
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 28.7
_reflns.d_resolution_high 1.8
_reflns.number_obs 4469
_reflns.number_all ?
_reflns.percent_possible_obs 98.7
_reflns.pdbx_Rmerge_I_obs 0.061
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 19.1
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 6.5
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.8
_reflns_shell.d_res_low 1.9
_reflns_shell.percent_possible_all 97.4
_reflns_shell.Rmerge_I_obs 0.782
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 2.3
_reflns_shell.pdbx_redundancy 6.6
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3GSJ
_refine.ls_number_reflns_obs 4190
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 27.59
_refine.ls_d_res_high 1.80
_refine.ls_percent_reflns_obs 98.21
_refine.ls_R_factor_obs 0.18471
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.18328
_refine.ls_R_factor_R_free 0.21251
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.5
_refine.ls_number_reflns_R_free 198
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.971
_refine.correlation_coeff_Fo_to_Fc_free 0.969
_refine.B_iso_mean 21.081
_refine.aniso_B[1][1] 0.36
_refine.aniso_B[2][2] 0.36
_refine.aniso_B[3][3] -0.71
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct SAD
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.137
_refine.pdbx_overall_ESU_R_Free 0.123
_refine.overall_SU_ML 0.092
_refine.overall_SU_B 3.081
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 260
_refine_hist.pdbx_number_atoms_ligand 92
_refine_hist.number_atoms_solvent 63
_refine_hist.number_atoms_total 415
_refine_hist.d_res_high 1.80
_refine_hist.d_res_low 27.59
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.032 0.021 ? 402 'X-RAY DIFFRACTION' ?
r_bond_other_d 0.003 0.020 ? 173 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 4.281 3.000 ? 631 'X-RAY DIFFRACTION' ?
r_angle_other_deg 1.468 3.000 ? 409 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.198 0.200 ? 50 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.025 0.020 ? 234 'X-RAY DIFFRACTION' ?
r_gen_planes_other 0.002 0.020 ? 82 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.200 0.200 ? 45 'X-RAY DIFFRACTION' ?
r_nbd_other 0.249 0.200 ? 169 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.289 0.200 ? 165 'X-RAY DIFFRACTION' ?
r_nbtor_other 0.112 0.200 ? 64 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.242 0.200 ? 30 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.168 0.200 ? 40 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other 0.359 0.200 ? 66 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.222 0.200 ? 17 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_scbond_it 2.125 3.000 ? 678 'X-RAY DIFFRACTION' ?
r_scangle_it 3.210 4.500 ? 631 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.800
_refine_ls_shell.d_res_low 1.847
_refine_ls_shell.number_reflns_R_work 292
_refine_ls_shell.R_factor_R_work 0.377
_refine_ls_shell.percent_reflns_obs 96.26
_refine_ls_shell.R_factor_R_free 0.425
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 17
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 3GSJ
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3GSJ
_struct.title 'A Bulky Rhodium Complex Bound to an Adenosine-Adenosine DNA Mismatch'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3GSJ
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA MISMATCH, METALLOINTERCALATOR, DNA RECOGNITION, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 4 ?
F N N 5 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3GSJ
_struct_ref.pdbx_db_accession 3GSJ
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_seq_one_letter_code CGGAAATTACCG
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3GSJ
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 12
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 3GSJ
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 12
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 12
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1290 ?
1 MORE -20 ?
1 'SSA (A^2)' 5390 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -28.7100000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? F HOH . O ? ? ? 1_555 B NA . NA ? ? A HOH 54 A NA 1002 1_555 ? ? ? ? ? ? ? 2.619 ? ?
hydrog1 hydrog ? ? A DC 1 N3 A ? ? 1_555 A DG 12 N1 ? ? A DC 1 A DG 12 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 A ? ? 1_555 A DG 12 O6 ? ? A DC 1 A DG 12 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 A ? ? 1_555 A DG 12 N2 ? ? A DC 1 A DG 12 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 11 N3 ? ? A DG 2 A DC 11 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 11 O2 ? ? A DG 2 A DC 11 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 11 N4 ? ? A DG 2 A DC 11 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 3 A DC 10 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 3 A DC 10 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 3 A DC 10 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 5 A DT 8 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 5 A DT 8 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 7 N3 ? ? A DA 6 A DT 7 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 7 O4 ? ? A DA 6 A DT 7 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 6 N1 ? ? A DT 7 A DA 6 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 6 N6 ? ? A DT 7 A DA 6 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 8 A DA 5 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 8 A DA 5 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 10 A DG 3 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 10 A DG 3 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 10 A DG 3 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DC 11 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 11 A DG 2 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DC 11 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 11 A DG 2 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DC 11 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 11 A DG 2 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DC 1 N3 A ? A DG 12 A DC 1 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DC 1 O2 A ? A DG 12 A DC 1 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A DG 12 O6 ? ? ? 1_555 A DC 1 N4 A ? A DG 12 A DC 1 8_554 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A NA 1002 ? 2 'BINDING SITE FOR RESIDUE NA A 1002'
AC2 Software A CL 1003 ? 4 'BINDING SITE FOR RESIDUE CL A 1003'
AC3 Software A R1C 2001 ? 10 'BINDING SITE FOR RESIDUE R1C A 2001'
AC4 Software A R1C 2002 ? 11 'BINDING SITE FOR RESIDUE R1C A 2002'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 HOH F . ? HOH A 54 . ? 1_555 ?
2 AC1 2 R1C D . ? R1C A 2001 . ? 8_554 ?
3 AC2 4 DA A 4 ? DA A 4 . ? 2_555 ?
4 AC2 4 DA A 4 ? DA A 4 . ? 8_554 ?
5 AC2 4 DG A 12 ? DG A 12 . ? 7_555 ?
6 AC2 4 DG A 12 ? DG A 12 . ? 1_555 ?
7 AC3 10 DG A 3 ? DG A 3 . ? 1_555 ?
8 AC3 10 DA A 4 ? DA A 4 . ? 7_554 ?
9 AC3 10 DA A 5 ? DA A 5 . ? 1_555 ?
10 AC3 10 DT A 8 ? DT A 8 . ? 8_554 ?
11 AC3 10 DA A 9 ? DA A 9 . ? 8_554 ?
12 AC3 10 DC A 10 ? DC A 10 . ? 8_554 ?
13 AC3 10 DC A 11 ? DC A 11 . ? 8_554 ?
14 AC3 10 HOH F . ? HOH A 35 . ? 1_555 ?
15 AC3 10 HOH F . ? HOH A 58 . ? 1_555 ?
16 AC3 10 NA B . ? NA A 1002 . ? 8_554 ?
17 AC4 11 DC A 1 ? DC A 1 . ? 6_454 ?
18 AC4 11 DC A 1 ? DC A 1 . ? 4_455 ?
19 AC4 11 DA A 5 ? DA A 5 . ? 1_555 ?
20 AC4 11 DA A 5 ? DA A 5 . ? 8_554 ?
21 AC4 11 DA A 6 ? DA A 6 . ? 1_555 ?
22 AC4 11 DA A 6 ? DA A 6 . ? 8_554 ?
23 AC4 11 DT A 7 ? DT A 7 . ? 8_554 ?
24 AC4 11 DT A 7 ? DT A 7 . ? 1_555 ?
25 AC4 11 DG A 12 ? DG A 12 . ? 3_454 ?
26 AC4 11 DG A 12 ? DG A 12 . ? 5_454 ?
27 AC4 11 HOH F . ? HOH A 34 . ? 4_455 ?
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 O
_pdbx_validate_close_contact.auth_asym_id_1 A
_pdbx_validate_close_contact.auth_comp_id_1 HOH
_pdbx_validate_close_contact.auth_seq_id_1 48
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 O
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 HOH
_pdbx_validate_close_contact.auth_seq_id_2 62
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 1.66
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 23
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 58
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 7_554
_pdbx_validate_symm_contact.dist 2.04
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 N1 A DC 1 ? A C6 A DC 1 ? A 1.330 1.367 -0.037 0.006 N
2 1 N1 A DC 1 ? B C6 A DC 1 ? B 1.329 1.367 -0.038 0.006 N
3 1 C2 A DG 3 ? ? N3 A DG 3 ? ? 1.272 1.323 -0.051 0.008 N
4 1 "O3'" A DA 5 ? ? "C3'" A DA 5 ? ? 1.382 1.419 -0.037 0.006 N
5 1 C6 A DA 5 ? ? N6 A DA 5 ? ? 1.279 1.335 -0.056 0.008 N
6 1 C5 A DA 6 ? ? N7 A DA 6 ? ? 1.340 1.388 -0.048 0.006 N
7 1 N7 A DA 6 ? ? C8 A DA 6 ? ? 1.236 1.311 -0.075 0.007 N
8 1 C8 A DA 6 ? ? N9 A DA 6 ? ? 1.316 1.373 -0.057 0.008 N
9 1 C2 A DT 8 ? ? O2 A DT 8 ? ? 1.149 1.220 -0.071 0.008 N
10 1 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.458 1.496 -0.038 0.006 N
11 1 P A DA 9 ? ? "O5'" A DA 9 ? ? 1.527 1.593 -0.066 0.010 N
12 1 "C2'" A DC 11 ? ? "C1'" A DC 11 ? ? 1.457 1.518 -0.061 0.010 N
13 1 P A DG 12 ? ? OP1 A DG 12 ? ? 1.368 1.485 -0.117 0.017 N
14 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? 1.526 1.420 0.106 0.011 N
15 1 "O3'" A DG 12 ? ? "C3'" A DG 12 ? ? 1.371 1.419 -0.048 0.006 N
16 1 C5 A DG 12 ? ? N7 A DG 12 ? ? 1.341 1.388 -0.047 0.006 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O5'" A DC 1 ? A "C5'" A DC 1 ? A "C4'" A DC 1 ? A 103.94 109.40 -5.46 0.80 N
2 1 "C1'" A DC 1 ? B "O4'" A DC 1 ? B "C4'" A DC 1 ? B 115.34 110.30 5.04 0.70 N
3 1 N1 A DC 1 ? B "C1'" A DC 1 ? B "C2'" A DC 1 ? B 125.63 114.30 11.33 1.40 N
4 1 "O4'" A DC 1 ? B "C1'" A DC 1 ? B N1 A DC 1 ? B 100.59 108.00 -7.41 0.70 N
5 1 N3 A DC 1 ? B C4 A DC 1 ? B C5 A DC 1 ? B 119.40 121.90 -2.50 0.40 N
6 1 N3 A DC 1 ? A C4 A DC 1 ? A N4 A DC 1 ? A 123.47 118.00 5.47 0.70 N
7 1 C5 A DC 1 ? A C4 A DC 1 ? A N4 A DC 1 ? A 115.21 120.20 -4.99 0.70 N
8 1 "C3'" A DC 1 ? B "O3'" A DC 1 ? B P A DG 2 ? ? 132.18 119.70 12.48 1.20 Y
9 1 "O3'" A DC 1 ? B P A DG 2 ? ? "O5'" A DG 2 ? ? 91.81 104.00 -12.19 1.90 Y
10 1 "O5'" A DG 2 ? ? P A DG 2 ? ? OP2 A DG 2 ? ? 98.32 105.70 -7.38 0.90 N
11 1 "O5'" A DG 3 ? ? P A DG 3 ? ? OP2 A DG 3 ? ? 99.48 105.70 -6.22 0.90 N
12 1 N1 A DG 3 ? ? C2 A DG 3 ? ? N3 A DG 3 ? ? 119.09 123.90 -4.81 0.60 N
13 1 C2 A DG 3 ? ? N3 A DG 3 ? ? C4 A DG 3 ? ? 115.60 111.90 3.70 0.50 N
14 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DA 4 ? ? 128.71 119.70 9.01 1.20 Y
15 1 "O5'" A DA 4 ? ? P A DA 4 ? ? OP1 A DA 4 ? ? 124.98 110.70 14.28 1.20 N
16 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 99.11 108.00 -8.89 0.70 N
17 1 C6 A DA 4 ? ? N1 A DA 4 ? ? C2 A DA 4 ? ? 122.27 118.60 3.67 0.60 N
18 1 OP1 A DA 5 ? ? P A DA 5 ? ? OP2 A DA 5 ? ? 131.96 119.60 12.36 1.50 N
19 1 "O5'" A DA 5 ? ? "C5'" A DA 5 ? ? "C4'" A DA 5 ? ? 103.39 109.40 -6.01 0.80 N
20 1 "O4'" A DA 5 ? ? "C4'" A DA 5 ? ? "C3'" A DA 5 ? ? 100.90 104.50 -3.60 0.40 N
21 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 113.97 108.30 5.67 0.30 N
22 1 C6 A DA 5 ? ? N1 A DA 5 ? ? C2 A DA 5 ? ? 122.40 118.60 3.80 0.60 N
23 1 N3 A DA 5 ? ? C4 A DA 5 ? ? C5 A DA 5 ? ? 131.00 126.80 4.20 0.70 N
24 1 C8 A DA 5 ? ? N9 A DA 5 ? ? C4 A DA 5 ? ? 108.29 105.80 2.49 0.40 N
25 1 "O5'" A DA 6 ? ? "C5'" A DA 6 ? ? "C4'" A DA 6 ? ? 102.21 109.40 -7.19 0.80 N
26 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.09 108.30 2.79 0.30 N
27 1 C2 A DA 6 ? ? N3 A DA 6 ? ? C4 A DA 6 ? ? 105.67 110.60 -4.93 0.50 N
28 1 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 112.02 117.70 -5.68 0.50 N
29 1 C5 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 129.33 123.70 5.63 0.80 N
30 1 "O5'" A DT 7 ? ? P A DT 7 ? ? OP2 A DT 7 ? ? 100.18 105.70 -5.52 0.90 N
31 1 N1 A DT 7 ? ? "C1'" A DT 7 ? ? "C2'" A DT 7 ? ? 125.26 114.30 10.96 1.40 N
32 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 97.44 108.00 -10.56 0.70 N
33 1 N1 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 128.88 123.10 5.78 0.80 N
34 1 OP1 A DT 8 ? ? P A DT 8 ? ? OP2 A DT 8 ? ? 129.73 119.60 10.13 1.50 N
35 1 "O5'" A DA 9 ? ? P A DA 9 ? ? OP1 A DA 9 ? ? 118.18 110.70 7.48 1.20 N
36 1 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 101.09 104.50 -3.41 0.40 N
37 1 "C1'" A DA 9 ? ? "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? 114.63 110.30 4.33 0.70 N
38 1 C6 A DA 9 ? ? N1 A DA 9 ? ? C2 A DA 9 ? ? 123.66 118.60 5.06 0.60 N
39 1 N1 A DA 9 ? ? C2 A DA 9 ? ? N3 A DA 9 ? ? 126.15 129.30 -3.15 0.50 N
40 1 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 113.90 117.70 -3.80 0.50 N
41 1 N9 A DA 9 ? ? C4 A DA 9 ? ? C5 A DA 9 ? ? 102.73 105.80 -3.07 0.40 N
42 1 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 124.29 118.60 5.69 0.60 N
43 1 OP1 A DC 10 ? ? P A DC 10 ? ? OP2 A DC 10 ? ? 129.77 119.60 10.17 1.50 N
44 1 "O5'" A DC 10 ? ? "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? 100.99 109.40 -8.41 0.80 N
45 1 P A DC 10 ? ? "O5'" A DC 10 ? ? "C5'" A DC 10 ? ? 134.01 120.90 13.11 1.60 N
46 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 110.05 106.80 3.25 0.50 N
47 1 "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? "C3'" A DC 11 ? ? 101.88 104.50 -2.62 0.40 N
48 1 "C3'" A DC 11 ? ? "C2'" A DC 11 ? ? "C1'" A DC 11 ? ? 97.48 102.40 -4.92 0.80 N
49 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 103.20 108.00 -4.80 0.70 N
50 1 C6 A DC 11 ? ? N1 A DC 11 ? ? C2 A DC 11 ? ? 123.91 120.30 3.61 0.40 N
51 1 N1 A DC 11 ? ? C2 A DC 11 ? ? N3 A DC 11 ? ? 113.93 119.20 -5.27 0.70 N
52 1 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 124.25 118.90 5.35 0.60 N
53 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 99.37 108.00 -8.63 0.70 N
54 1 N1 A DG 12 ? ? C2 A DG 12 ? ? N3 A DG 12 ? ? 115.99 123.90 -7.91 0.60 N
55 1 C2 A DG 12 ? ? N3 A DG 12 ? ? C4 A DG 12 ? ? 119.91 111.90 8.01 0.50 N
56 1 N3 A DG 12 ? ? C4 A DG 12 ? ? C5 A DG 12 ? ? 125.05 128.60 -3.55 0.50 N
57 1 N1 A DG 12 ? ? C2 A DG 12 ? ? N2 A DG 12 ? ? 122.71 116.20 6.51 0.90 N
58 1 N1 A DG 12 ? ? C6 A DG 12 ? ? O6 A DG 12 ? ? 123.58 119.90 3.68 0.60 N
59 1 C5 A DG 12 ? ? C6 A DG 12 ? ? O6 A DG 12 ? ? 124.49 128.60 -4.11 0.60 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id R1C
_pdbx_struct_special_symmetry.auth_seq_id 2002
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id E
_pdbx_struct_special_symmetry.label_comp_id R1C
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CL CL CL N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
NA NA NA N N 148
R1C RH RH N N 149
R1C N5 N N N 150
R1C N6 N N N 151
R1C C21 C Y N 152
R1C C22 C Y N 153
R1C C23 C Y N 154
R1C C24 C Y N 155
R1C C25 C Y N 156
R1C C26 C Y N 157
R1C C27 C Y N 158
R1C C28 C Y N 159
R1C C29 C Y N 160
R1C C30 C Y N 161
R1C C31 C Y N 162
R1C C32 C Y N 163
R1C C33 C Y N 164
R1C C34 C Y N 165
R1C C35 C Y N 166
R1C C36 C Y N 167
R1C C37 C Y N 168
R1C C38 C Y N 169
R1C N1 N Y N 170
R1C N2 N Y N 171
R1C N3 N Y N 172
R1C N4 N Y N 173
R1C C1 C Y N 174
R1C C2 C Y N 175
R1C C3 C Y N 176
R1C C4 C Y N 177
R1C C5 C Y N 178
R1C C6 C Y N 179
R1C C7 C Y N 180
R1C C8 C Y N 181
R1C C9 C Y N 182
R1C C10 C Y N 183
R1C C11 C Y N 184
R1C C12 C Y N 185
R1C C13 C Y N 186
R1C C14 C Y N 187
R1C C15 C Y N 188
R1C C16 C Y N 189
R1C C17 C Y N 190
R1C C18 C Y N 191
R1C C19 C Y N 192
R1C C20 C Y N 193
R1C H25 H N N 194
R1C H26 H N N 195
R1C H27 H N N 196
R1C H28 H N N 197
R1C H30 H N N 198
R1C H31 H N N 199
R1C H34 H N N 200
R1C H35 H N N 201
R1C H36 H N N 202
R1C H37 H N N 203
R1C H1 H N N 204
R1C H2 H N N 205
R1C H3 H N N 206
R1C H4 H N N 207
R1C H7 H N N 208
R1C H8 H N N 209
R1C H9 H N N 210
R1C H10 H N N 211
R1C H11 H N N 212
R1C H12 H N N 213
R1C H13 H N N 214
R1C H14 H N N 215
R1C H17 H N N 216
R1C H18 H N N 217
R1C H19 H N N 218
R1C H20 H N N 219
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
R1C C27 C26 doub Y N 152
R1C C27 C28 sing Y N 153
R1C C2 C3 doub Y N 154
R1C C2 C1 sing Y N 155
R1C C26 C25 sing Y N 156
R1C C28 C29 doub Y N 157
R1C C3 C4 sing Y N 158
R1C C12 C11 doub Y N 159
R1C C12 C13 sing Y N 160
R1C C1 N1 doub Y N 161
R1C C25 C24 doub Y N 162
R1C C29 C24 sing Y N 163
R1C C29 C30 sing Y N 164
R1C C11 N3 sing Y N 165
R1C C4 C5 doub Y N 166
R1C C13 C14 doub Y N 167
R1C C24 C23 sing Y N 168
R1C C30 C31 doub Y N 169
R1C N1 C5 sing Y N 170
R1C N1 RH sing N N 171
R1C C5 C6 sing Y N 172
R1C N6 C22 doub N N 173
R1C N6 RH sing N N 174
R1C N3 C15 doub Y N 175
R1C N3 RH sing N N 176
R1C C23 C22 sing Y N 177
R1C C23 C32 doub Y N 178
R1C C14 C15 sing Y N 179
R1C C31 C32 sing Y N 180
R1C C22 C21 sing Y N 181
R1C C32 C33 sing Y N 182
R1C C15 C16 sing Y N 183
R1C RH N2 sing N N 184
R1C RH N5 sing N N 185
R1C RH N4 sing N N 186
R1C C6 N2 doub Y N 187
R1C C6 C7 sing Y N 188
R1C C21 N5 doub N N 189
R1C C21 C38 sing Y N 190
R1C N2 C10 sing Y N 191
R1C C33 C38 doub Y N 192
R1C C33 C34 sing Y N 193
R1C C7 C8 doub Y N 194
R1C C38 C37 sing Y N 195
R1C C16 N4 doub Y N 196
R1C C16 C17 sing Y N 197
R1C C34 C35 doub Y N 198
R1C N4 C20 sing Y N 199
R1C C10 C9 doub Y N 200
R1C C8 C9 sing Y N 201
R1C C17 C18 doub Y N 202
R1C C37 C36 doub Y N 203
R1C C35 C36 sing Y N 204
R1C C20 C19 doub Y N 205
R1C C18 C19 sing Y N 206
R1C C25 H25 sing N N 207
R1C C26 H26 sing N N 208
R1C C27 H27 sing N N 209
R1C C28 H28 sing N N 210
R1C C30 H30 sing N N 211
R1C C31 H31 sing N N 212
R1C C34 H34 sing N N 213
R1C C35 H35 sing N N 214
R1C C36 H36 sing N N 215
R1C C37 H37 sing N N 216
R1C C1 H1 sing N N 217
R1C C2 H2 sing N N 218
R1C C3 H3 sing N N 219
R1C C4 H4 sing N N 220
R1C C7 H7 sing N N 221
R1C C8 H8 sing N N 222
R1C C9 H9 sing N N 223
R1C C10 H10 sing N N 224
R1C C11 H11 sing N N 225
R1C C12 H12 sing N N 226
R1C C13 H13 sing N N 227
R1C C14 H14 sing N N 228
R1C C17 H17 sing N N 229
R1C C18 H18 sing N N 230
R1C C19 H19 sing N N 231
R1C C20 H20 sing N N 232
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3GSJ 'double helix'
3GSJ 'b-form double helix'
3GSJ 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 A DG 12 8_554 0.064 -0.332 0.844 -16.190 -2.442 -4.893 1 A_DC1:DG12_A A 1 ? A 12 ? 19 1
1 A DG 2 1_555 A DC 11 8_554 -0.170 -0.207 0.064 3.370 1.387 -2.076 2 A_DG2:DC11_A A 2 ? A 11 ? 19 1
1 A DG 3 1_555 A DC 10 8_554 -0.289 -0.156 0.511 18.006 -6.005 0.214 3 A_DG3:DC10_A A 3 ? A 10 ? 19 1
1 A DC 1 1_555 A DG 12 1_555 0.064 -0.332 0.844 -16.190 -2.442 -4.893 4 A_DC1:DG12_A A 1 ? A 12 ? 19 1
1 A DG 2 1_555 A DC 11 1_555 -0.170 -0.207 0.064 3.370 1.387 -2.076 5 A_DG2:DC11_A A 2 ? A 11 ? 19 1
1 A DG 3 1_555 A DC 10 1_555 -0.289 -0.156 0.511 18.006 -6.005 0.214 6 A_DG3:DC10_A A 3 ? A 10 ? 19 1
1 A DA 5 1_555 A DT 8 8_554 -0.072 -0.110 0.181 -1.322 8.571 5.057 7 A_DA5:DT8_A A 5 ? A 8 ? 20 1
1 A DA 6 1_555 A DT 7 8_554 0.141 -0.167 0.249 7.283 -6.874 1.212 8 A_DA6:DT7_A A 6 ? A 7 ? 20 1
1 A DT 7 1_555 A DA 6 8_554 -0.141 -0.167 0.249 -7.283 -6.874 1.212 9 A_DT7:DA6_A A 7 ? A 6 ? 20 1
1 A DT 8 1_555 A DA 5 8_554 0.072 -0.110 0.181 1.322 8.571 5.057 10 A_DT8:DA5_A A 8 ? A 5 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 A DG 12 8_554 A DG 2 1_555 A DC 11 8_554 1.113 2.190 3.033 11.059 2.835 39.952 2.791 -0.398 3.354 4.050
-15.799 41.487 1 AA_DC1DG2:DC11DG12_AA A 1 ? A 12 ? A 2 ? A 11 ?
1 A DG 2 1_555 A DC 11 8_554 A DG 3 1_555 A DC 10 8_554 -0.366 2.645 3.335 -6.012 6.123 34.777 3.337 -0.355 3.742 10.056 9.874
35.788 2 AA_DG2DG3:DC10DC11_AA A 2 ? A 11 ? A 3 ? A 10 ?
1 A DC 1 1_555 A DG 12 1_555 A DG 2 1_555 A DC 11 1_555 1.113 2.190 3.033 11.059 2.835 39.952 2.791 -0.398 3.354 4.050
-15.799 41.487 3 AA_DC1DG2:DC11DG12_AA A 1 ? A 12 ? A 2 ? A 11 ?
1 A DG 2 1_555 A DC 11 1_555 A DG 3 1_555 A DC 10 1_555 -0.366 2.645 3.335 -6.012 6.123 34.777 3.337 -0.355 3.742 10.056 9.874
35.788 4 AA_DG2DG3:DC10DC11_AA A 2 ? A 11 ? A 3 ? A 10 ?
1 A DA 5 1_555 A DT 8 8_554 A DA 6 1_555 A DT 7 8_554 -0.848 0.823 3.296 0.358 4.332 32.245 0.694 1.577 3.366 7.756
-0.641 32.529 5 AA_DA5DA6:DT7DT8_AA A 5 ? A 8 ? A 6 ? A 7 ?
1 A DA 6 1_555 A DT 7 8_554 A DT 7 1_555 A DA 6 8_554 0.000 -0.251 7.132 0.000 -10.429 27.171 4.533 0.000 6.764 -21.232 0.000
29.069 6 AA_DA6DT7:DA6DT7_AA A 6 ? A 7 ? A 7 ? A 6 ?
1 A DT 7 1_555 A DA 6 8_554 A DT 8 1_555 A DA 5 8_554 0.848 0.823 3.296 -0.358 4.332 32.245 0.694 -1.577 3.366 7.756 0.641
32.529 7 AA_DT7DT8:DA5DA6_AA A 7 ? A 6 ? A 8 ? A 5 ?
#
_atom_sites.entry_id 3GSJ
_atom_sites.fract_transf_matrix[1][1] 0.025628
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.025628
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.017416
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CL
N
NA
O
P
RH
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" A DC A 1 1 ? 16.161 14.300 -19.092 0.50 24.89 ? 1 DC A "O5'" 1
ATOM 2 O "O5'" B DC A 1 1 ? 16.175 16.677 -23.955 0.50 36.11 ? 1 DC A "O5'" 1
ATOM 3 C "C5'" A DC A 1 1 ? 14.833 14.504 -18.997 0.50 27.05 ? 1 DC A "C5'" 1
ATOM 4 C "C5'" B DC A 1 1 ? 15.243 17.240 -23.019 0.50 36.25 ? 1 DC A "C5'" 1
ATOM 5 C "C4'" A DC A 1 1 ? 14.534 15.472 -20.111 0.50 27.57 ? 1 DC A "C4'" 1
ATOM 6 C "C4'" B DC A 1 1 ? 14.076 16.333 -22.587 0.50 34.25 ? 1 DC A "C4'" 1
ATOM 7 O "O4'" A DC A 1 1 ? 15.360 15.087 -21.253 0.50 28.33 ? 1 DC A "O4'" 1
ATOM 8 O "O4'" B DC A 1 1 ? 14.369 14.999 -23.011 0.50 33.56 ? 1 DC A "O4'" 1
ATOM 9 C "C3'" A DC A 1 1 ? 13.093 15.368 -20.550 0.50 27.13 ? 1 DC A "C3'" 1
ATOM 10 C "C3'" B DC A 1 1 ? 13.780 16.159 -21.096 0.50 33.22 ? 1 DC A "C3'" 1
ATOM 11 O "O3'" A DC A 1 1 ? 12.638 16.612 -20.976 0.50 31.05 ? 1 DC A "O3'" 1
ATOM 12 O "O3'" B DC A 1 1 ? 12.380 16.159 -20.950 0.50 36.12 ? 1 DC A "O3'" 1
ATOM 13 C "C2'" A DC A 1 1 ? 13.123 14.359 -21.656 0.50 26.10 ? 1 DC A "C2'" 1
ATOM 14 C "C2'" B DC A 1 1 ? 14.388 14.788 -20.740 0.50 32.93 ? 1 DC A "C2'" 1
ATOM 15 C "C1'" A DC A 1 1 ? 14.512 14.565 -22.243 0.50 24.48 ? 1 DC A "C1'" 1
ATOM 16 C "C1'" B DC A 1 1 ? 14.197 14.008 -22.035 0.50 27.34 ? 1 DC A "C1'" 1
ATOM 17 N N1 A DC A 1 1 ? 15.086 13.353 -22.745 0.50 25.21 ? 1 DC A N1 1
ATOM 18 N N1 B DC A 1 1 ? 15.134 12.923 -22.568 0.50 24.77 ? 1 DC A N1 1
ATOM 19 C C2 A DC A 1 1 ? 14.482 12.645 -23.819 0.50 23.31 ? 1 DC A C2 1
ATOM 20 C C2 B DC A 1 1 ? 14.919 12.481 -23.889 0.50 19.80 ? 1 DC A C2 1
ATOM 21 O O2 A DC A 1 1 ? 13.417 13.073 -24.375 0.50 23.90 ? 1 DC A O2 1
ATOM 22 O O2 B DC A 1 1 ? 14.018 13.033 -24.573 0.50 19.42 ? 1 DC A O2 1
ATOM 23 N N3 A DC A 1 1 ? 15.126 11.504 -24.191 0.50 22.20 ? 1 DC A N3 1
ATOM 24 N N3 B DC A 1 1 ? 15.720 11.526 -24.425 0.50 19.02 ? 1 DC A N3 1
ATOM 25 C C4 A DC A 1 1 ? 16.244 11.102 -23.590 0.50 21.06 ? 1 DC A C4 1
ATOM 26 C C4 B DC A 1 1 ? 16.664 10.968 -23.704 0.50 18.03 ? 1 DC A C4 1
ATOM 27 N N4 A DC A 1 1 ? 16.907 10.016 -23.938 0.50 19.93 ? 1 DC A N4 1
ATOM 28 N N4 B DC A 1 1 ? 17.414 10.040 -24.271 0.50 20.40 ? 1 DC A N4 1
ATOM 29 C C5 A DC A 1 1 ? 16.800 11.824 -22.542 0.50 21.42 ? 1 DC A C5 1
ATOM 30 C C5 B DC A 1 1 ? 16.867 11.399 -22.374 0.50 21.01 ? 1 DC A C5 1
ATOM 31 C C6 A DC A 1 1 ? 16.188 12.908 -22.148 0.50 23.22 ? 1 DC A C6 1
ATOM 32 C C6 B DC A 1 1 ? 16.075 12.334 -21.838 0.50 20.12 ? 1 DC A C6 1
ATOM 33 P P . DG A 1 2 ? 11.360 17.198 -20.238 1.00 37.56 ? 2 DG A P 1
ATOM 34 O OP1 . DG A 1 2 ? 11.050 18.351 -21.080 1.00 36.84 ? 2 DG A OP1 1
ATOM 35 O OP2 . DG A 1 2 ? 11.589 17.211 -18.783 1.00 35.22 ? 2 DG A OP2 1
ATOM 36 O "O5'" . DG A 1 2 ? 10.170 16.134 -20.275 1.00 34.87 ? 2 DG A "O5'" 1
ATOM 37 C "C5'" . DG A 1 2 ? 9.327 16.088 -21.439 1.00 32.18 ? 2 DG A "C5'" 1
ATOM 38 C "C4'" . DG A 1 2 ? 8.759 14.687 -21.583 1.00 25.67 ? 2 DG A "C4'" 1
ATOM 39 O "O4'" . DG A 1 2 ? 9.791 13.696 -21.778 1.00 25.85 ? 2 DG A "O4'" 1
ATOM 40 C "C3'" . DG A 1 2 ? 7.987 14.299 -20.330 1.00 26.67 ? 2 DG A "C3'" 1
ATOM 41 O "O3'" . DG A 1 2 ? 6.784 13.641 -20.667 1.00 30.79 ? 2 DG A "O3'" 1
ATOM 42 C "C2'" . DG A 1 2 ? 8.899 13.360 -19.631 1.00 26.59 ? 2 DG A "C2'" 1
ATOM 43 C "C1'" . DG A 1 2 ? 9.534 12.658 -20.800 1.00 22.85 ? 2 DG A "C1'" 1
ATOM 44 N N9 . DG A 1 2 ? 10.765 11.997 -20.490 1.00 23.59 ? 2 DG A N9 1
ATOM 45 C C8 . DG A 1 2 ? 11.565 12.124 -19.391 1.00 21.99 ? 2 DG A C8 1
ATOM 46 N N7 . DG A 1 2 ? 12.641 11.439 -19.460 1.00 22.34 ? 2 DG A N7 1
ATOM 47 C C5 . DG A 1 2 ? 12.592 10.793 -20.662 1.00 21.65 ? 2 DG A C5 1
ATOM 48 C C6 . DG A 1 2 ? 13.504 9.964 -21.258 1.00 21.62 ? 2 DG A C6 1
ATOM 49 O O6 . DG A 1 2 ? 14.555 9.506 -20.839 1.00 23.60 ? 2 DG A O6 1
ATOM 50 N N1 . DG A 1 2 ? 13.104 9.553 -22.521 1.00 23.13 ? 2 DG A N1 1
ATOM 51 C C2 . DG A 1 2 ? 11.938 9.917 -23.127 1.00 20.19 ? 2 DG A C2 1
ATOM 52 N N2 . DG A 1 2 ? 11.759 9.397 -24.304 1.00 22.92 ? 2 DG A N2 1
ATOM 53 N N3 . DG A 1 2 ? 11.043 10.734 -22.572 1.00 21.90 ? 2 DG A N3 1
ATOM 54 C C4 . DG A 1 2 ? 11.453 11.139 -21.349 1.00 23.12 ? 2 DG A C4 1
ATOM 55 P P . DG A 1 3 ? 5.393 14.309 -20.395 1.00 28.85 ? 3 DG A P 1
ATOM 56 O OP1 . DG A 1 3 ? 5.463 15.522 -21.161 1.00 31.66 ? 3 DG A OP1 1
ATOM 57 O OP2 . DG A 1 3 ? 4.993 14.201 -18.976 1.00 34.24 ? 3 DG A OP2 1
ATOM 58 O "O5'" . DG A 1 3 ? 4.317 13.347 -21.043 1.00 28.24 ? 3 DG A "O5'" 1
ATOM 59 C "C5'" . DG A 1 3 ? 4.211 13.175 -22.464 1.00 23.47 ? 3 DG A "C5'" 1
ATOM 60 C "C4'" . DG A 1 3 ? 3.875 11.730 -22.817 1.00 23.50 ? 3 DG A "C4'" 1
ATOM 61 O "O4'" . DG A 1 3 ? 5.075 10.969 -22.505 1.00 24.14 ? 3 DG A "O4'" 1
ATOM 62 C "C3'" . DG A 1 3 ? 2.755 11.061 -22.068 1.00 23.68 ? 3 DG A "C3'" 1
ATOM 63 O "O3'" . DG A 1 3 ? 2.220 9.980 -22.747 1.00 25.45 ? 3 DG A "O3'" 1
ATOM 64 C "C2'" . DG A 1 3 ? 3.505 10.475 -20.897 1.00 24.25 ? 3 DG A "C2'" 1
ATOM 65 C "C1'" . DG A 1 3 ? 4.826 10.054 -21.491 1.00 22.27 ? 3 DG A "C1'" 1
ATOM 66 N N9 . DG A 1 3 ? 5.946 10.066 -20.575 1.00 22.37 ? 3 DG A N9 1
ATOM 67 C C8 . DG A 1 3 ? 6.071 10.712 -19.383 1.00 21.56 ? 3 DG A C8 1
ATOM 68 N N7 . DG A 1 3 ? 7.190 10.525 -18.780 1.00 19.59 ? 3 DG A N7 1
ATOM 69 C C5 . DG A 1 3 ? 7.863 9.708 -19.656 1.00 20.03 ? 3 DG A C5 1
ATOM 70 C C6 . DG A 1 3 ? 9.114 9.132 -19.553 1.00 22.17 ? 3 DG A C6 1
ATOM 71 O O6 . DG A 1 3 ? 9.937 9.250 -18.641 1.00 21.24 ? 3 DG A O6 1
ATOM 72 N N1 . DG A 1 3 ? 9.401 8.304 -20.651 1.00 21.49 ? 3 DG A N1 1
ATOM 73 C C2 . DG A 1 3 ? 8.592 8.010 -21.716 1.00 20.61 ? 3 DG A C2 1
ATOM 74 N N2 . DG A 1 3 ? 9.060 7.184 -22.700 1.00 18.22 ? 3 DG A N2 1
ATOM 75 N N3 . DG A 1 3 ? 7.454 8.572 -21.802 1.00 19.95 ? 3 DG A N3 1
ATOM 76 C C4 . DG A 1 3 ? 7.117 9.380 -20.760 1.00 22.97 ? 3 DG A C4 1
ATOM 77 P P . DA A 1 4 ? 0.859 9.912 -23.651 1.00 26.24 ? 4 DA A P 1
ATOM 78 O OP1 . DA A 1 4 ? 0.698 11.290 -24.013 1.00 25.10 ? 4 DA A OP1 1
ATOM 79 O OP2 . DA A 1 4 ? -0.096 9.300 -22.706 1.00 32.54 ? 4 DA A OP2 1
ATOM 80 O "O5'" . DA A 1 4 ? 1.149 8.751 -24.654 1.00 25.55 ? 4 DA A "O5'" 1
ATOM 81 C "C5'" . DA A 1 4 ? 2.078 9.100 -25.728 1.00 25.02 ? 4 DA A "C5'" 1
ATOM 82 C "C4'" . DA A 1 4 ? 1.836 8.064 -26.804 1.00 24.50 ? 4 DA A "C4'" 1
ATOM 83 O "O4'" . DA A 1 4 ? 2.761 8.213 -27.944 1.00 21.03 ? 4 DA A "O4'" 1
ATOM 84 C "C3'" . DA A 1 4 ? 2.037 6.621 -26.382 1.00 24.76 ? 4 DA A "C3'" 1
ATOM 85 O "O3'" . DA A 1 4 ? 1.171 5.810 -27.117 1.00 24.56 ? 4 DA A "O3'" 1
ATOM 86 C "C2'" . DA A 1 4 ? 3.487 6.341 -26.779 1.00 22.91 ? 4 DA A "C2'" 1
ATOM 87 C "C1'" . DA A 1 4 ? 3.538 7.079 -28.104 1.00 17.65 ? 4 DA A "C1'" 1
ATOM 88 N N9 . DA A 1 4 ? 4.746 7.695 -28.565 1.00 18.31 ? 4 DA A N9 1
ATOM 89 C C8 . DA A 1 4 ? 5.561 8.569 -27.918 1.00 19.46 ? 4 DA A C8 1
ATOM 90 N N7 . DA A 1 4 ? 6.576 8.936 -28.609 1.00 16.96 ? 4 DA A N7 1
ATOM 91 C C5 . DA A 1 4 ? 6.409 8.308 -29.805 1.00 18.17 ? 4 DA A C5 1
ATOM 92 C C6 . DA A 1 4 ? 7.122 8.323 -31.020 1.00 16.23 ? 4 DA A C6 1
ATOM 93 N N6 . DA A 1 4 ? 8.221 8.979 -31.188 1.00 18.97 ? 4 DA A N6 1
ATOM 94 N N1 . DA A 1 4 ? 6.644 7.554 -32.009 1.00 19.26 ? 4 DA A N1 1
ATOM 95 C C2 . DA A 1 4 ? 5.534 6.836 -31.876 1.00 18.78 ? 4 DA A C2 1
ATOM 96 N N3 . DA A 1 4 ? 4.780 6.722 -30.814 1.00 20.12 ? 4 DA A N3 1
ATOM 97 C C4 . DA A 1 4 ? 5.287 7.503 -29.807 1.00 20.53 ? 4 DA A C4 1
ATOM 98 P P . DA A 1 5 ? -0.267 5.165 -26.593 1.00 26.71 ? 5 DA A P 1
ATOM 99 O OP1 . DA A 1 5 ? -0.591 4.324 -27.814 1.00 28.44 ? 5 DA A OP1 1
ATOM 100 O OP2 . DA A 1 5 ? -0.952 6.261 -25.976 1.00 24.13 ? 5 DA A OP2 1
ATOM 101 O "O5'" . DA A 1 5 ? 0.252 4.244 -25.433 1.00 25.09 ? 5 DA A "O5'" 1
ATOM 102 C "C5'" . DA A 1 5 ? 1.008 3.195 -25.692 1.00 20.91 ? 5 DA A "C5'" 1
ATOM 103 C "C4'" . DA A 1 5 ? 0.796 2.289 -24.461 1.00 26.72 ? 5 DA A "C4'" 1
ATOM 104 O "O4'" . DA A 1 5 ? 1.490 2.800 -23.331 1.00 28.26 ? 5 DA A "O4'" 1
ATOM 105 C "C3'" . DA A 1 5 ? -0.629 2.181 -23.902 1.00 29.70 ? 5 DA A "C3'" 1
ATOM 106 O "O3'" . DA A 1 5 ? -0.844 0.839 -23.654 1.00 34.71 ? 5 DA A "O3'" 1
ATOM 107 C "C2'" . DA A 1 5 ? -0.674 2.997 -22.619 1.00 30.28 ? 5 DA A "C2'" 1
ATOM 108 C "C1'" . DA A 1 5 ? 0.723 2.693 -22.138 1.00 23.79 ? 5 DA A "C1'" 1
ATOM 109 N N9 . DA A 1 5 ? 1.138 3.578 -21.102 1.00 18.74 ? 5 DA A N9 1
ATOM 110 C C8 . DA A 1 5 ? 0.613 4.756 -20.772 1.00 21.35 ? 5 DA A C8 1
ATOM 111 N N7 . DA A 1 5 ? 1.243 5.346 -19.822 1.00 25.07 ? 5 DA A N7 1
ATOM 112 C C5 . DA A 1 5 ? 2.243 4.430 -19.490 1.00 21.98 ? 5 DA A C5 1
ATOM 113 C C6 . DA A 1 5 ? 3.258 4.432 -18.533 1.00 14.03 ? 5 DA A C6 1
ATOM 114 N N6 . DA A 1 5 ? 3.500 5.326 -17.651 1.00 20.84 ? 5 DA A N6 1
ATOM 115 N N1 . DA A 1 5 ? 4.067 3.394 -18.546 1.00 20.11 ? 5 DA A N1 1
ATOM 116 C C2 . DA A 1 5 ? 3.940 2.394 -19.433 1.00 21.47 ? 5 DA A C2 1
ATOM 117 N N3 . DA A 1 5 ? 3.027 2.293 -20.392 1.00 22.90 ? 5 DA A N3 1
ATOM 118 C C4 . DA A 1 5 ? 2.221 3.359 -20.315 1.00 18.86 ? 5 DA A C4 1
ATOM 119 P P . DA A 1 6 ? -1.618 -0.185 -24.686 1.00 37.76 ? 6 DA A P 1
ATOM 120 O OP1 . DA A 1 6 ? -0.983 -0.229 -26.020 1.00 42.88 ? 6 DA A OP1 1
ATOM 121 O OP2 . DA A 1 6 ? -3.040 0.138 -24.377 1.00 35.75 ? 6 DA A OP2 1
ATOM 122 O "O5'" . DA A 1 6 ? -1.141 -1.507 -24.008 1.00 35.11 ? 6 DA A "O5'" 1
ATOM 123 C "C5'" . DA A 1 6 ? -0.005 -2.288 -24.356 1.00 32.29 ? 6 DA A "C5'" 1
ATOM 124 C "C4'" . DA A 1 6 ? 0.411 -2.874 -23.005 1.00 30.90 ? 6 DA A "C4'" 1
ATOM 125 O "O4'" . DA A 1 6 ? 0.727 -1.795 -22.065 1.00 30.56 ? 6 DA A "O4'" 1
ATOM 126 C "C3'" . DA A 1 6 ? -0.690 -3.646 -22.284 1.00 29.47 ? 6 DA A "C3'" 1
ATOM 127 O "O3'" . DA A 1 6 ? -0.034 -4.818 -21.865 1.00 36.73 ? 6 DA A "O3'" 1
ATOM 128 C "C2'" . DA A 1 6 ? -1.153 -2.787 -21.132 1.00 29.37 ? 6 DA A "C2'" 1
ATOM 129 C "C1'" . DA A 1 6 ? 0.148 -2.046 -20.783 1.00 28.78 ? 6 DA A "C1'" 1
ATOM 130 N N9 . DA A 1 6 ? 0.072 -0.830 -19.998 1.00 24.01 ? 6 DA A N9 1
ATOM 131 C C8 . DA A 1 6 ? -0.855 0.102 -20.059 1.00 22.09 ? 6 DA A C8 1
ATOM 132 N N7 . DA A 1 6 ? -0.764 1.010 -19.226 1.00 23.26 ? 6 DA A N7 1
ATOM 133 C C5 . DA A 1 6 ? 0.376 0.769 -18.565 1.00 22.72 ? 6 DA A C5 1
ATOM 134 C C6 . DA A 1 6 ? 1.016 1.474 -17.558 1.00 24.18 ? 6 DA A C6 1
ATOM 135 N N6 . DA A 1 6 ? 0.649 2.645 -16.950 1.00 22.86 ? 6 DA A N6 1
ATOM 136 N N1 . DA A 1 6 ? 2.140 0.844 -17.131 1.00 24.18 ? 6 DA A N1 1
ATOM 137 C C2 . DA A 1 6 ? 2.543 -0.297 -17.678 1.00 21.73 ? 6 DA A C2 1
ATOM 138 N N3 . DA A 1 6 ? 2.010 -1.047 -18.626 1.00 25.59 ? 6 DA A N3 1
ATOM 139 C C4 . DA A 1 6 ? 0.893 -0.418 -18.998 1.00 22.46 ? 6 DA A C4 1
ATOM 140 P P . DT A 1 7 ? -0.767 -6.168 -21.368 1.00 41.32 ? 7 DT A P 1
ATOM 141 O OP1 . DT A 1 7 ? -0.150 -7.293 -22.065 1.00 42.13 ? 7 DT A OP1 1
ATOM 142 O OP2 . DT A 1 7 ? -2.212 -5.936 -21.392 1.00 39.51 ? 7 DT A OP2 1
ATOM 143 O "O5'" . DT A 1 7 ? -0.511 -6.189 -19.794 1.00 41.66 ? 7 DT A "O5'" 1
ATOM 144 C "C5'" . DT A 1 7 ? 0.695 -5.765 -19.185 1.00 39.96 ? 7 DT A "C5'" 1
ATOM 145 C "C4'" . DT A 1 7 ? 0.765 -6.333 -17.780 1.00 37.61 ? 7 DT A "C4'" 1
ATOM 146 O "O4'" . DT A 1 7 ? -0.017 -5.556 -16.868 1.00 34.68 ? 7 DT A "O4'" 1
ATOM 147 C "C3'" . DT A 1 7 ? 0.207 -7.766 -17.553 1.00 33.57 ? 7 DT A "C3'" 1
ATOM 148 O "O3'" . DT A 1 7 ? 1.373 -8.392 -17.032 1.00 32.56 ? 7 DT A "O3'" 1
ATOM 149 C "C2'" . DT A 1 7 ? -0.995 -7.644 -16.560 1.00 31.34 ? 7 DT A "C2'" 1
ATOM 150 C "C1'" . DT A 1 7 ? -0.553 -6.394 -15.826 1.00 30.28 ? 7 DT A "C1'" 1
ATOM 151 N N1 . DT A 1 7 ? -1.440 -5.414 -15.235 1.00 25.02 ? 7 DT A N1 1
ATOM 152 C C2 . DT A 1 7 ? -0.941 -4.708 -14.151 1.00 22.25 ? 7 DT A C2 1
ATOM 153 O O2 . DT A 1 7 ? 0.118 -4.835 -13.587 1.00 25.06 ? 7 DT A O2 1
ATOM 154 N N3 . DT A 1 7 ? -1.802 -3.789 -13.709 1.00 22.39 ? 7 DT A N3 1
ATOM 155 C C4 . DT A 1 7 ? -3.016 -3.442 -14.212 1.00 22.97 ? 7 DT A C4 1
ATOM 156 O O4 . DT A 1 7 ? -3.641 -2.521 -13.685 1.00 27.44 ? 7 DT A O4 1
ATOM 157 C C5 . DT A 1 7 ? -3.474 -4.161 -15.368 1.00 23.56 ? 7 DT A C5 1
ATOM 158 C C7 . DT A 1 7 ? -4.826 -3.883 -15.970 1.00 23.50 ? 7 DT A C7 1
ATOM 159 C C6 . DT A 1 7 ? -2.660 -5.104 -15.834 1.00 24.95 ? 7 DT A C6 1
ATOM 160 P P . DT A 1 8 ? 1.472 -9.979 -16.788 1.00 33.20 ? 8 DT A P 1
ATOM 161 O OP1 . DT A 1 8 ? 2.943 -10.250 -16.770 1.00 33.44 ? 8 DT A OP1 1
ATOM 162 O OP2 . DT A 1 8 ? 0.418 -10.661 -17.497 1.00 30.05 ? 8 DT A OP2 1
ATOM 163 O "O5'" . DT A 1 8 ? 1.037 -10.106 -15.259 1.00 28.68 ? 8 DT A "O5'" 1
ATOM 164 C "C5'" . DT A 1 8 ? 1.906 -9.683 -14.282 1.00 26.79 ? 8 DT A "C5'" 1
ATOM 165 C "C4'" . DT A 1 8 ? 1.235 -9.713 -12.889 1.00 28.13 ? 8 DT A "C4'" 1
ATOM 166 O "O4'" . DT A 1 8 ? 0.266 -8.660 -12.773 1.00 31.02 ? 8 DT A "O4'" 1
ATOM 167 C "C3'" . DT A 1 8 ? 0.528 -11.019 -12.581 1.00 27.60 ? 8 DT A "C3'" 1
ATOM 168 O "O3'" . DT A 1 8 ? 1.168 -11.614 -11.453 1.00 28.51 ? 8 DT A "O3'" 1
ATOM 169 C "C2'" . DT A 1 8 ? -0.936 -10.654 -12.331 1.00 28.99 ? 8 DT A "C2'" 1
ATOM 170 C "C1'" . DT A 1 8 ? -0.834 -9.148 -11.976 1.00 29.20 ? 8 DT A "C1'" 1
ATOM 171 N N1 . DT A 1 8 ? -2.004 -8.322 -12.288 1.00 22.37 ? 8 DT A N1 1
ATOM 172 C C2 . DT A 1 8 ? -2.192 -7.247 -11.479 1.00 21.39 ? 8 DT A C2 1
ATOM 173 O O2 . DT A 1 8 ? -1.495 -7.073 -10.582 1.00 20.82 ? 8 DT A O2 1
ATOM 174 N N3 . DT A 1 8 ? -3.224 -6.441 -11.799 1.00 20.20 ? 8 DT A N3 1
ATOM 175 C C4 . DT A 1 8 ? -4.099 -6.617 -12.826 1.00 20.89 ? 8 DT A C4 1
ATOM 176 O O4 . DT A 1 8 ? -4.977 -5.841 -13.023 1.00 23.26 ? 8 DT A O4 1
ATOM 177 C C5 . DT A 1 8 ? -3.809 -7.764 -13.675 1.00 21.12 ? 8 DT A C5 1
ATOM 178 C C7 . DT A 1 8 ? -4.630 -8.086 -14.836 1.00 25.20 ? 8 DT A C7 1
ATOM 179 C C6 . DT A 1 8 ? -2.791 -8.534 -13.362 1.00 19.84 ? 8 DT A C6 1
ATOM 180 P P . DA A 1 9 ? 1.645 -13.108 -11.450 1.00 27.49 ? 9 DA A P 1
ATOM 181 O OP1 . DA A 1 9 ? 2.492 -13.034 -10.275 1.00 27.01 ? 9 DA A OP1 1
ATOM 182 O OP2 . DA A 1 9 ? 2.166 -13.340 -12.833 1.00 28.26 ? 9 DA A OP2 1
ATOM 183 O "O5'" . DA A 1 9 ? 0.411 -14.006 -11.394 1.00 31.09 ? 9 DA A "O5'" 1
ATOM 184 C "C5'" . DA A 1 9 ? -0.556 -13.921 -10.260 1.00 30.30 ? 9 DA A "C5'" 1
ATOM 185 C "C4'" . DA A 1 9 ? -1.809 -14.706 -10.498 1.00 30.21 ? 9 DA A "C4'" 1
ATOM 186 O "O4'" . DA A 1 9 ? -2.646 -14.165 -11.547 1.00 33.14 ? 9 DA A "O4'" 1
ATOM 187 C "C3'" . DA A 1 9 ? -1.646 -16.131 -10.963 1.00 34.13 ? 9 DA A "C3'" 1
ATOM 188 O "O3'" . DA A 1 9 ? -2.733 -16.908 -10.503 1.00 36.74 ? 9 DA A "O3'" 1
ATOM 189 C "C2'" . DA A 1 9 ? -1.702 -16.043 -12.469 1.00 33.25 ? 9 DA A "C2'" 1
ATOM 190 C "C1'" . DA A 1 9 ? -2.702 -14.948 -12.715 1.00 31.57 ? 9 DA A "C1'" 1
ATOM 191 N N9 . DA A 1 9 ? -2.370 -14.033 -13.795 1.00 29.64 ? 9 DA A N9 1
ATOM 192 C C8 . DA A 1 9 ? -1.133 -13.809 -14.324 1.00 28.00 ? 9 DA A C8 1
ATOM 193 N N7 . DA A 1 9 ? -1.130 -12.896 -15.231 1.00 28.40 ? 9 DA A N7 1
ATOM 194 C C5 . DA A 1 9 ? -2.464 -12.515 -15.317 1.00 27.40 ? 9 DA A C5 1
ATOM 195 C C6 . DA A 1 9 ? -3.086 -11.618 -16.161 1.00 29.13 ? 9 DA A C6 1
ATOM 196 N N6 . DA A 1 9 ? -2.385 -10.885 -17.069 1.00 29.48 ? 9 DA A N6 1
ATOM 197 N N1 . DA A 1 9 ? -4.429 -11.495 -15.945 1.00 29.75 ? 9 DA A N1 1
ATOM 198 C C2 . DA A 1 9 ? -5.101 -12.200 -15.024 1.00 26.76 ? 9 DA A C2 1
ATOM 199 N N3 . DA A 1 9 ? -4.595 -13.125 -14.229 1.00 27.96 ? 9 DA A N3 1
ATOM 200 C C4 . DA A 1 9 ? -3.268 -13.205 -14.453 1.00 26.13 ? 9 DA A C4 1
ATOM 201 P P . DC A 1 10 ? -2.739 -17.721 -9.154 1.00 33.88 ? 10 DC A P 1
ATOM 202 O OP1 . DC A 1 10 ? -1.494 -18.312 -8.758 1.00 38.80 ? 10 DC A OP1 1
ATOM 203 O OP2 . DC A 1 10 ? -4.100 -18.318 -9.211 1.00 41.82 ? 10 DC A OP2 1
ATOM 204 O "O5'" . DC A 1 10 ? -2.845 -16.533 -8.130 1.00 37.37 ? 10 DC A "O5'" 1
ATOM 205 C "C5'" . DC A 1 10 ? -3.394 -16.398 -6.886 1.00 27.28 ? 10 DC A "C5'" 1
ATOM 206 C "C4'" . DC A 1 10 ? -2.675 -15.181 -6.387 1.00 24.30 ? 10 DC A "C4'" 1
ATOM 207 O "O4'" . DC A 1 10 ? -2.819 -14.038 -7.291 1.00 22.21 ? 10 DC A "O4'" 1
ATOM 208 C "C3'" . DC A 1 10 ? -3.104 -14.679 -5.021 1.00 22.49 ? 10 DC A "C3'" 1
ATOM 209 O "O3'" . DC A 1 10 ? -1.967 -14.058 -4.375 1.00 24.93 ? 10 DC A "O3'" 1
ATOM 210 C "C2'" . DC A 1 10 ? -4.254 -13.728 -5.342 1.00 20.65 ? 10 DC A "C2'" 1
ATOM 211 C "C1'" . DC A 1 10 ? -3.816 -13.172 -6.698 1.00 20.58 ? 10 DC A "C1'" 1
ATOM 212 N N1 . DC A 1 10 ? -4.941 -13.107 -7.616 1.00 21.01 ? 10 DC A N1 1
ATOM 213 C C2 . DC A 1 10 ? -5.879 -12.078 -7.447 1.00 22.79 ? 10 DC A C2 1
ATOM 214 O O2 . DC A 1 10 ? -5.698 -11.307 -6.524 1.00 20.98 ? 10 DC A O2 1
ATOM 215 N N3 . DC A 1 10 ? -6.900 -11.951 -8.305 1.00 21.85 ? 10 DC A N3 1
ATOM 216 C C4 . DC A 1 10 ? -7.051 -12.813 -9.298 1.00 19.74 ? 10 DC A C4 1
ATOM 217 N N4 . DC A 1 10 ? -8.059 -12.647 -10.161 1.00 17.83 ? 10 DC A N4 1
ATOM 218 C C5 . DC A 1 10 ? -6.137 -13.880 -9.475 1.00 19.50 ? 10 DC A C5 1
ATOM 219 C C6 . DC A 1 10 ? -5.076 -13.989 -8.667 1.00 20.56 ? 10 DC A C6 1
ATOM 220 P P . DC A 1 11 ? -1.147 -14.813 -3.246 1.00 27.46 ? 11 DC A P 1
ATOM 221 O OP1 . DC A 1 11 ? -0.083 -13.933 -2.886 1.00 23.55 ? 11 DC A OP1 1
ATOM 222 O OP2 . DC A 1 11 ? -1.062 -16.202 -3.606 1.00 31.82 ? 11 DC A OP2 1
ATOM 223 O "O5'" . DC A 1 11 ? -2.195 -14.825 -2.037 1.00 27.79 ? 11 DC A "O5'" 1
ATOM 224 C "C5'" . DC A 1 11 ? -2.590 -13.572 -1.441 1.00 25.94 ? 11 DC A "C5'" 1
ATOM 225 C "C4'" . DC A 1 11 ? -4.033 -13.599 -0.956 1.00 22.23 ? 11 DC A "C4'" 1
ATOM 226 O "O4'" . DC A 1 11 ? -4.907 -13.841 -2.045 1.00 23.49 ? 11 DC A "O4'" 1
ATOM 227 C "C3'" . DC A 1 11 ? -4.403 -14.703 -0.012 1.00 22.64 ? 11 DC A "C3'" 1
ATOM 228 O "O3'" . DC A 1 11 ? -5.252 -14.302 1.034 1.00 23.53 ? 11 DC A "O3'" 1
ATOM 229 C "C2'" . DC A 1 11 ? -5.066 -15.757 -0.876 1.00 21.43 ? 11 DC A "C2'" 1
ATOM 230 C "C1'" . DC A 1 11 ? -5.848 -14.854 -1.710 1.00 20.57 ? 11 DC A "C1'" 1
ATOM 231 N N1 . DC A 1 11 ? -6.344 -15.293 -3.013 1.00 18.93 ? 11 DC A N1 1
ATOM 232 C C2 . DC A 1 11 ? -7.278 -14.431 -3.617 1.00 18.92 ? 11 DC A C2 1
ATOM 233 O O2 . DC A 1 11 ? -7.735 -13.359 -3.069 1.00 19.87 ? 11 DC A O2 1
ATOM 234 N N3 . DC A 1 11 ? -7.715 -14.854 -4.812 1.00 21.63 ? 11 DC A N3 1
ATOM 235 C C4 . DC A 1 11 ? -7.215 -15.973 -5.401 1.00 18.76 ? 11 DC A C4 1
ATOM 236 N N4 . DC A 1 11 ? -7.656 -16.311 -6.609 1.00 20.69 ? 11 DC A N4 1
ATOM 237 C C5 . DC A 1 11 ? -6.338 -16.809 -4.738 1.00 18.69 ? 11 DC A C5 1
ATOM 238 C C6 . DC A 1 11 ? -5.882 -16.406 -3.583 1.00 19.68 ? 11 DC A C6 1
ATOM 239 P P . DG A 1 12 ? -4.670 -14.048 2.509 1.00 28.07 ? 12 DG A P 1
ATOM 240 O OP1 . DG A 1 12 ? -3.459 -13.413 2.550 1.00 25.34 ? 12 DG A OP1 1
ATOM 241 O OP2 . DG A 1 12 ? -4.848 -15.320 3.205 1.00 32.32 ? 12 DG A OP2 1
ATOM 242 O "O5'" . DG A 1 12 ? -5.744 -13.056 3.119 1.00 25.74 ? 12 DG A "O5'" 1
ATOM 243 C "C5'" . DG A 1 12 ? -5.851 -11.710 2.599 1.00 22.23 ? 12 DG A "C5'" 1
ATOM 244 C "C4'" . DG A 1 12 ? -7.235 -11.186 2.825 1.00 20.76 ? 12 DG A "C4'" 1
ATOM 245 O "O4'" . DG A 1 12 ? -8.108 -11.839 1.867 1.00 19.87 ? 12 DG A "O4'" 1
ATOM 246 C "C3'" . DG A 1 12 ? -7.869 -11.521 4.187 1.00 21.32 ? 12 DG A "C3'" 1
ATOM 247 O "O3'" . DG A 1 12 ? -8.797 -10.565 4.509 1.00 19.75 ? 12 DG A "O3'" 1
ATOM 248 C "C2'" . DG A 1 12 ? -8.625 -12.859 4.005 1.00 23.88 ? 12 DG A "C2'" 1
ATOM 249 C "C1'" . DG A 1 12 ? -9.114 -12.763 2.547 1.00 23.38 ? 12 DG A "C1'" 1
ATOM 250 N N9 . DG A 1 12 ? -9.048 -13.874 1.656 1.00 21.85 ? 12 DG A N9 1
ATOM 251 C C8 . DG A 1 12 ? -8.189 -14.894 1.703 1.00 21.77 ? 12 DG A C8 1
ATOM 252 N N7 . DG A 1 12 ? -8.288 -15.662 0.640 1.00 23.27 ? 12 DG A N7 1
ATOM 253 C C5 . DG A 1 12 ? -9.191 -15.084 -0.166 1.00 22.16 ? 12 DG A C5 1
ATOM 254 C C6 . DG A 1 12 ? -9.671 -15.474 -1.417 1.00 24.37 ? 12 DG A C6 1
ATOM 255 O O6 . DG A 1 12 ? -9.276 -16.486 -2.046 1.00 24.12 ? 12 DG A O6 1
ATOM 256 N N1 . DG A 1 12 ? -10.624 -14.573 -1.916 1.00 24.10 ? 12 DG A N1 1
ATOM 257 C C2 . DG A 1 12 ? -11.156 -13.471 -1.263 1.00 20.27 ? 12 DG A C2 1
ATOM 258 N N2 . DG A 1 12 ? -12.110 -12.670 -1.824 1.00 19.89 ? 12 DG A N2 1
ATOM 259 N N3 . DG A 1 12 ? -10.667 -13.218 -0.061 1.00 19.26 ? 12 DG A N3 1
ATOM 260 C C4 . DG A 1 12 ? -9.699 -13.985 0.437 1.00 20.46 ? 12 DG A C4 1
HETATM 261 NA NA . NA B 2 . ? 1.038 -15.641 -7.042 1.00 45.52 ? 1002 NA A NA 1
HETATM 262 CL CL . CL C 3 . ? -9.953 -10.214 -0.425 0.50 27.65 ? 1003 CL A CL 1
HETATM 263 RH RH . R1C D 4 . ? 8.184 1.496 -22.848 1.00 22.67 ? 2001 R1C A RH 1
HETATM 264 N N5 . R1C D 4 . ? 6.768 2.535 -22.950 1.00 18.43 ? 2001 R1C A N5 1
HETATM 265 N N6 . R1C D 4 . ? 8.500 2.645 -21.480 1.00 19.08 ? 2001 R1C A N6 1
HETATM 266 C C21 . R1C D 4 . ? 6.480 3.615 -22.081 1.00 18.55 ? 2001 R1C A C21 1
HETATM 267 C C22 . R1C D 4 . ? 7.631 3.634 -21.121 1.00 18.24 ? 2001 R1C A C22 1
HETATM 268 C C23 . R1C D 4 . ? 7.758 4.654 -20.072 1.00 17.73 ? 2001 R1C A C23 1
HETATM 269 C C24 . R1C D 4 . ? 8.894 4.761 -19.136 1.00 19.14 ? 2001 R1C A C24 1
HETATM 270 C C25 . R1C D 4 . ? 9.969 3.891 -19.170 1.00 18.92 ? 2001 R1C A C25 1
HETATM 271 C C26 . R1C D 4 . ? 11.033 4.002 -18.292 1.00 19.26 ? 2001 R1C A C26 1
HETATM 272 C C27 . R1C D 4 . ? 11.030 4.965 -17.332 1.00 18.80 ? 2001 R1C A C27 1
HETATM 273 C C28 . R1C D 4 . ? 9.951 5.848 -17.250 1.00 19.35 ? 2001 R1C A C28 1
HETATM 274 C C29 . R1C D 4 . ? 8.876 5.724 -18.144 1.00 18.48 ? 2001 R1C A C29 1
HETATM 275 C C30 . R1C D 4 . ? 7.834 6.568 -18.056 1.00 17.20 ? 2001 R1C A C30 1
HETATM 276 C C31 . R1C D 4 . ? 6.759 6.524 -18.949 1.00 18.61 ? 2001 R1C A C31 1
HETATM 277 C C32 . R1C D 4 . ? 6.664 5.601 -20.003 1.00 17.61 ? 2001 R1C A C32 1
HETATM 278 C C33 . R1C D 4 . ? 5.560 5.589 -20.930 1.00 18.43 ? 2001 R1C A C33 1
HETATM 279 C C34 . R1C D 4 . ? 4.535 6.531 -20.789 1.00 19.68 ? 2001 R1C A C34 1
HETATM 280 C C35 . R1C D 4 . ? 3.404 6.565 -21.648 1.00 19.46 ? 2001 R1C A C35 1
HETATM 281 C C36 . R1C D 4 . ? 3.315 5.617 -22.636 1.00 17.57 ? 2001 R1C A C36 1
HETATM 282 C C37 . R1C D 4 . ? 4.310 4.687 -22.806 1.00 19.54 ? 2001 R1C A C37 1
HETATM 283 C C38 . R1C D 4 . ? 5.426 4.623 -21.944 1.00 19.08 ? 2001 R1C A C38 1
HETATM 284 N N1 . R1C D 4 . ? 9.050 2.633 -24.196 1.00 20.50 ? 2001 R1C A N1 1
HETATM 285 N N2 . R1C D 4 . ? 7.778 0.510 -24.472 1.00 22.34 ? 2001 R1C A N2 1
HETATM 286 N N3 . R1C D 4 . ? 9.731 0.494 -22.440 1.00 25.89 ? 2001 R1C A N3 1
HETATM 287 N N4 . R1C D 4 . ? 7.366 0.238 -21.624 1.00 23.35 ? 2001 R1C A N4 1
HETATM 288 C C1 . R1C D 4 . ? 9.764 3.727 -23.915 1.00 20.37 ? 2001 R1C A C1 1
HETATM 289 C C2 . R1C D 4 . ? 10.356 4.528 -24.903 1.00 22.49 ? 2001 R1C A C2 1
HETATM 290 C C3 . R1C D 4 . ? 10.300 4.159 -26.218 1.00 21.48 ? 2001 R1C A C3 1
HETATM 291 C C4 . R1C D 4 . ? 9.603 2.997 -26.553 1.00 21.56 ? 2001 R1C A C4 1
HETATM 292 C C5 . R1C D 4 . ? 8.984 2.266 -25.528 1.00 20.61 ? 2001 R1C A C5 1
HETATM 293 C C6 . R1C D 4 . ? 8.208 1.037 -25.718 1.00 20.00 ? 2001 R1C A C6 1
HETATM 294 C C7 . R1C D 4 . ? 7.978 0.510 -26.998 1.00 23.22 ? 2001 R1C A C7 1
HETATM 295 C C8 . R1C D 4 . ? 7.206 -0.629 -27.121 1.00 22.04 ? 2001 R1C A C8 1
HETATM 296 C C9 . R1C D 4 . ? 6.759 -1.198 -25.939 1.00 23.99 ? 2001 R1C A C9 1
HETATM 297 C C10 . R1C D 4 . ? 7.061 -0.626 -24.659 1.00 22.96 ? 2001 R1C A C10 1
HETATM 298 C C11 . R1C D 4 . ? 11.077 0.670 -22.852 1.00 23.92 ? 2001 R1C A C11 1
HETATM 299 C C12 . R1C D 4 . ? 12.158 -0.012 -22.325 1.00 26.03 ? 2001 R1C A C12 1
HETATM 300 C C13 . R1C D 4 . ? 11.954 -0.988 -21.314 1.00 24.52 ? 2001 R1C A C13 1
HETATM 301 C C14 . R1C D 4 . ? 10.691 -1.170 -20.841 1.00 24.90 ? 2001 R1C A C14 1
HETATM 302 C C15 . R1C D 4 . ? 9.630 -0.422 -21.391 1.00 25.86 ? 2001 R1C A C15 1
HETATM 303 C C16 . R1C D 4 . ? 8.213 -0.593 -20.947 1.00 26.90 ? 2001 R1C A C16 1
HETATM 304 C C17 . R1C D 4 . ? 7.788 -1.524 -19.951 1.00 26.90 ? 2001 R1C A C17 1
HETATM 305 C C18 . R1C D 4 . ? 6.469 -1.575 -19.642 1.00 25.42 ? 2001 R1C A C18 1
HETATM 306 C C19 . R1C D 4 . ? 5.604 -0.711 -20.310 1.00 26.31 ? 2001 R1C A C19 1
HETATM 307 C C20 . R1C D 4 . ? 6.063 0.163 -21.290 1.00 23.87 ? 2001 R1C A C20 1
HETATM 308 RH RH . R1C E 4 . ? -3.664 3.565 -14.407 0.50 25.12 ? 2002 R1C A RH 1
HETATM 309 N N5 . R1C E 4 . ? -3.488 2.010 -15.318 0.50 22.46 ? 2002 R1C A N5 1
HETATM 310 N N6 . R1C E 4 . ? -2.131 3.141 -13.542 0.50 22.80 ? 2002 R1C A N6 1
HETATM 311 C C21 . R1C E 4 . ? -2.374 1.233 -15.011 0.50 22.24 ? 2002 R1C A C21 1
HETATM 312 C C22 . R1C E 4 . ? -1.576 1.916 -13.967 0.50 22.00 ? 2002 R1C A C22 1
HETATM 313 C C23 . R1C E 4 . ? -0.339 1.250 -13.471 0.50 21.73 ? 2002 R1C A C23 1
HETATM 314 C C24 . R1C E 4 . ? 0.539 1.782 -12.381 0.50 21.80 ? 2002 R1C A C24 1
HETATM 315 C C25 . R1C E 4 . ? 0.256 2.961 -11.708 0.50 22.52 ? 2002 R1C A C25 1
HETATM 316 C C26 . R1C E 4 . ? 1.074 3.460 -10.691 0.50 22.66 ? 2002 R1C A C26 1
HETATM 317 C C27 . R1C E 4 . ? 2.207 2.746 -10.318 0.50 22.12 ? 2002 R1C A C27 1
HETATM 318 C C28 . R1C E 4 . ? 2.502 1.570 -10.977 0.50 22.22 ? 2002 R1C A C28 1
HETATM 319 C C29 . R1C E 4 . ? 1.688 1.070 -11.993 0.50 22.84 ? 2002 R1C A C29 1
HETATM 320 C C30 . R1C E 4 . ? 2.029 -0.129 -12.594 0.50 21.83 ? 2002 R1C A C30 1
HETATM 321 C C31 . R1C E 4 . ? 1.246 -0.667 -13.630 0.50 22.35 ? 2002 R1C A C31 1
HETATM 322 C C32 . R1C E 4 . ? 0.049 -0.049 -14.066 0.50 22.33 ? 2002 R1C A C32 1
HETATM 323 C C33 . R1C E 4 . ? -0.685 -0.659 -15.116 0.50 21.45 ? 2002 R1C A C33 1
HETATM 324 C C34 . R1C E 4 . ? -0.248 -1.869 -15.679 0.50 21.86 ? 2002 R1C A C34 1
HETATM 325 C C35 . R1C E 4 . ? -0.935 -2.509 -16.685 0.50 21.76 ? 2002 R1C A C35 1
HETATM 326 C C36 . R1C E 4 . ? -2.096 -1.916 -17.175 0.50 21.72 ? 2002 R1C A C36 1
HETATM 327 C C37 . R1C E 4 . ? -2.545 -0.714 -16.628 0.50 21.91 ? 2002 R1C A C37 1
HETATM 328 C C38 . R1C E 4 . ? -1.866 -0.061 -15.602 0.50 21.57 ? 2002 R1C A C38 1
HETATM 329 N N1 . R1C E 4 . ? -4.716 2.686 -13.045 0.50 23.74 ? 2002 R1C A N1 1
HETATM 330 N N2 . R1C E 4 . ? -5.329 3.597 -15.212 0.50 24.42 ? 2002 R1C A N2 1
HETATM 331 N N3 . R1C E 4 . ? -3.493 5.234 -13.683 0.50 23.07 ? 2002 R1C A N3 1
HETATM 332 N N4 . R1C E 4 . ? -2.801 4.403 -15.916 0.50 24.28 ? 2002 R1C A N4 1
HETATM 333 C C1 . R1C E 4 . ? -4.220 2.253 -11.849 0.50 23.96 ? 2002 R1C A C1 1
HETATM 334 C C2 . R1C E 4 . ? -5.006 1.565 -10.914 0.50 22.97 ? 2002 R1C A C2 1
HETATM 335 C C3 . R1C E 4 . ? -6.344 1.336 -11.198 0.50 24.04 ? 2002 R1C A C3 1
HETATM 336 C C4 . R1C E 4 . ? -6.885 1.773 -12.409 0.50 23.11 ? 2002 R1C A C4 1
HETATM 337 C C5 . R1C E 4 . ? -6.023 2.430 -13.293 0.50 22.74 ? 2002 R1C A C5 1
HETATM 338 C C6 . R1C E 4 . ? -6.396 2.968 -14.602 0.50 25.08 ? 2002 R1C A C6 1
HETATM 339 C C7 . R1C E 4 . ? -7.669 2.826 -15.135 0.50 22.86 ? 2002 R1C A C7 1
HETATM 340 C C8 . R1C E 4 . ? -7.927 3.338 -16.377 0.50 23.01 ? 2002 R1C A C8 1
HETATM 341 C C9 . R1C E 4 . ? -6.897 3.982 -17.004 0.50 23.76 ? 2002 R1C A C9 1
HETATM 342 C C10 . R1C E 4 . ? -5.651 4.100 -16.435 0.50 22.83 ? 2002 R1C A C10 1
HETATM 343 C C11 . R1C E 4 . ? -3.895 5.706 -12.456 0.50 22.35 ? 2002 R1C A C11 1
HETATM 344 C C12 . R1C E 4 . ? -3.639 6.993 -12.018 0.50 22.80 ? 2002 R1C A C12 1
HETATM 345 C C13 . R1C E 4 . ? -2.999 7.911 -12.806 0.50 22.68 ? 2002 R1C A C13 1
HETATM 346 C C14 . R1C E 4 . ? -2.608 7.496 -14.053 0.50 22.73 ? 2002 R1C A C14 1
HETATM 347 C C15 . R1C E 4 . ? -2.870 6.194 -14.467 0.50 24.95 ? 2002 R1C A C15 1
HETATM 348 C C16 . R1C E 4 . ? -2.479 5.691 -15.792 0.50 22.25 ? 2002 R1C A C16 1
HETATM 349 C C17 . R1C E 4 . ? -1.860 6.429 -16.804 0.50 22.96 ? 2002 R1C A C17 1
HETATM 350 C C18 . R1C E 4 . ? -1.541 5.789 -17.998 0.50 22.53 ? 2002 R1C A C18 1
HETATM 351 C C19 . R1C E 4 . ? -1.862 4.458 -18.160 0.50 22.81 ? 2002 R1C A C19 1
HETATM 352 C C20 . R1C E 4 . ? -2.529 3.789 -17.122 0.50 23.08 ? 2002 R1C A C20 1
HETATM 353 O O . HOH F 5 . ? 2.513 -5.733 -12.635 1.00 61.48 ? 13 HOH A O 1
HETATM 354 O O . HOH F 5 . ? 10.132 -2.349 -25.123 1.00 31.58 ? 14 HOH A O 1
HETATM 355 O O . HOH F 5 . ? -6.861 -14.205 -12.859 1.00 50.04 ? 15 HOH A O 1
HETATM 356 O O . HOH F 5 . ? 3.873 9.081 -17.538 1.00 37.76 ? 16 HOH A O 1
HETATM 357 O O . HOH F 5 . ? 9.267 -3.474 -27.417 1.00 40.58 ? 17 HOH A O 1
HETATM 358 O O . HOH F 5 . ? 0.260 10.820 -28.424 1.00 24.70 ? 18 HOH A O 1
HETATM 359 O O . HOH F 5 . ? -7.452 -18.209 1.116 1.00 39.89 ? 19 HOH A O 1
HETATM 360 O O . HOH F 5 . ? 1.335 -13.688 -17.268 1.00 44.95 ? 20 HOH A O 1
HETATM 361 O O . HOH F 5 . ? 0.048 15.338 -27.389 1.00 34.13 ? 21 HOH A O 1
HETATM 362 O O . HOH F 5 . ? -7.374 -0.784 -16.614 1.00 52.17 ? 22 HOH A O 1
HETATM 363 O O . HOH F 5 . ? 2.526 4.969 -31.745 1.00 31.04 ? 23 HOH A O 1
HETATM 364 O O . HOH F 5 . ? -6.586 -16.099 4.983 1.00 34.88 ? 24 HOH A O 1
HETATM 365 O O . HOH F 5 . ? 8.812 17.574 -24.629 1.00 36.54 ? 25 HOH A O 1
HETATM 366 O O . HOH F 5 . ? 18.817 12.793 -19.964 1.00 34.63 ? 26 HOH A O 1
HETATM 367 O O . HOH F 5 . ? 3.502 12.309 -17.713 1.00 37.60 ? 27 HOH A O 1
HETATM 368 O O . HOH F 5 . ? 16.571 9.649 -18.974 1.00 38.73 ? 28 HOH A O 1
HETATM 369 O O . HOH F 5 . ? -6.510 -18.434 -8.071 1.00 35.57 ? 29 HOH A O 1
HETATM 370 O O . HOH F 5 . ? -7.282 -20.472 -4.357 1.00 35.88 ? 30 HOH A O 1
HETATM 371 O O . HOH F 5 . ? 11.431 15.193 -17.321 1.00 41.35 ? 31 HOH A O 1
HETATM 372 O O . HOH F 5 . ? -6.742 -9.989 -17.145 1.00 48.53 ? 32 HOH A O 1
HETATM 373 O O . HOH F 5 . ? -7.413 -5.723 -13.606 1.00 38.78 ? 33 HOH A O 1
HETATM 374 O O . HOH F 5 . ? 13.978 18.882 -25.546 1.00 55.85 ? 34 HOH A O 1
HETATM 375 O O . HOH F 5 . ? 8.769 -2.803 -23.093 1.00 37.73 ? 35 HOH A O 1
HETATM 376 O O . HOH F 5 . ? 2.961 -1.271 -25.760 1.00 53.20 ? 36 HOH A O 1
HETATM 377 O O . HOH F 5 . ? -4.370 2.174 -25.435 1.00 47.67 ? 37 HOH A O 1
HETATM 378 O O . HOH F 5 . ? 13.769 13.627 -15.827 1.00 49.63 ? 38 HOH A O 1
HETATM 379 O O . HOH F 5 . ? -1.446 -15.265 3.867 1.00 50.93 ? 39 HOH A O 1
HETATM 380 O O . HOH F 5 . ? 4.305 -12.771 -14.421 1.00 48.61 ? 40 HOH A O 1
HETATM 381 O O . HOH F 5 . ? -3.031 3.550 -29.130 1.00 60.73 ? 41 HOH A O 1
HETATM 382 O O . HOH F 5 . ? 3.581 -4.361 -16.553 1.00 52.67 ? 42 HOH A O 1
HETATM 383 O O . HOH F 5 . ? -1.747 8.977 -27.460 1.00 41.03 ? 43 HOH A O 1
HETATM 384 O O . HOH F 5 . ? 4.254 -2.010 -23.495 1.00 47.88 ? 44 HOH A O 1
HETATM 385 O O . HOH F 5 . ? 0.199 10.244 -20.081 1.00 34.46 ? 45 HOH A O 1
HETATM 386 O O . HOH F 5 . ? 1.583 -16.110 -14.180 1.00 46.48 ? 46 HOH A O 1
HETATM 387 O O . HOH F 5 . ? -8.425 -8.697 -14.198 1.00 42.18 ? 47 HOH A O 1
HETATM 388 O O . HOH F 5 . ? 1.530 12.191 -26.937 1.00 56.11 ? 48 HOH A O 1
HETATM 389 O O . HOH F 5 . ? -5.706 -16.694 -10.974 1.00 42.21 ? 49 HOH A O 1
HETATM 390 O O . HOH F 5 . ? 7.726 11.630 -16.297 1.00 43.58 ? 50 HOH A O 1
HETATM 391 O O . HOH F 5 . ? 6.788 14.153 -16.796 1.00 47.00 ? 51 HOH A O 1
HETATM 392 O O . HOH F 5 . ? -2.778 -1.038 -28.599 1.00 55.05 ? 52 HOH A O 1
HETATM 393 O O . HOH F 5 . ? -2.921 -16.311 -16.364 1.00 52.85 ? 53 HOH A O 1
HETATM 394 O O . HOH F 5 . ? 2.939 -15.590 -8.843 1.00 37.41 ? 54 HOH A O 1
HETATM 395 O O . HOH F 5 . ? -3.195 -18.361 -2.986 1.00 42.09 ? 55 HOH A O 1
HETATM 396 O O . HOH F 5 . ? 4.212 -8.569 -10.959 1.00 57.37 ? 56 HOH A O 1
HETATM 397 O O . HOH F 5 . ? 3.963 -4.149 -21.352 1.00 54.89 ? 57 HOH A O 1
HETATM 398 O O . HOH F 5 . ? 4.304 1.297 -24.195 1.00 43.15 ? 58 HOH A O 1
HETATM 399 O O . HOH F 5 . ? 1.842 -14.722 -0.493 1.00 48.62 ? 59 HOH A O 1
HETATM 400 O O . HOH F 5 . ? 11.784 18.539 -23.479 1.00 49.79 ? 60 HOH A O 1
HETATM 401 O O . HOH F 5 . ? 4.209 -10.623 -9.366 1.00 48.67 ? 61 HOH A O 1
HETATM 402 O O . HOH F 5 . ? 0.079 12.706 -26.330 1.00 14.77 ? 62 HOH A O 1
HETATM 403 O O . HOH F 5 . ? 1.466 8.038 -18.849 1.00 32.05 ? 63 HOH A O 1
HETATM 404 O O . HOH F 5 . ? -6.941 -11.656 -1.133 0.50 12.78 ? 64 HOH A O 1
HETATM 405 O O . HOH F 5 . ? 8.673 5.523 -32.909 1.00 20.79 ? 65 HOH A O 1
HETATM 406 O O . HOH F 5 . ? -0.012 -11.227 -2.595 1.00 24.14 ? 66 HOH A O 1
HETATM 407 O O . HOH F 5 . ? 15.722 19.124 -21.581 1.00 40.30 ? 67 HOH A O 1
HETATM 408 O O . HOH F 5 . ? -5.666 -0.767 -14.245 1.00 38.81 ? 68 HOH A O 1
HETATM 409 O O . HOH F 5 . ? 2.993 -0.009 -22.201 1.00 30.47 ? 69 HOH A O 1
HETATM 410 O O . HOH F 5 . ? -7.951 -18.741 -1.885 1.00 30.16 ? 70 HOH A O 1
HETATM 411 O O . HOH F 5 . ? 14.190 11.443 -17.061 1.00 28.64 ? 71 HOH A O 1
HETATM 412 O O . HOH F 5 . ? 0.902 3.763 -29.964 1.00 31.47 ? 72 HOH A O 1
HETATM 413 O O . HOH F 5 . ? 10.233 10.052 -16.113 1.00 32.64 ? 73 HOH A O 1
HETATM 414 O O . HOH F 5 . ? -0.193 -10.684 -20.083 1.00 51.76 ? 74 HOH A O 1
HETATM 415 O O . HOH F 5 . ? 3.134 -3.305 -19.139 1.00 40.11 ? 75 HOH A O 1
#