data_3GOJ
#
_entry.id 3GOJ
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.378
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3GOJ pdb_00003goj 10.2210/pdb3goj/pdb
NDB UD0079 ? ?
RCSB RCSB052118 ? ?
WWPDB D_1000052118 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 1P4Y 'Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions' unspecified
PDB 1NVY 'Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4' unspecified
#
_pdbx_database_status.entry_id 3GOJ
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2009-03-19
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Naseer, A.' 1
'Cardin, C.J.' 2
#
_citation.id primary
_citation.title 'Barium bound to the Holliday junction structure'
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Naseer, A.' 1 ?
primary 'Cardin, C.J.' 2 ?
#
_cell.entry_id 3GOJ
_cell.length_a 65.2430
_cell.length_b 24.2410
_cell.length_c 37.2810
_cell.angle_alpha 90.00
_cell.angle_beta 110.1700
_cell.angle_gamma 90.0000
_cell.pdbx_unique_axis ?
_cell.Z_PDB 8
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3GOJ
_symmetry.Int_Tables_number 5
_symmetry.space_group_name_H-M 'C 1 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'" 3046.980 2 ? ? ? 'Holliday junction structure'
2 non-polymer syn 'BARIUM ION' 137.327 4 ? ? ? ?
3 water nat water 18.015 23 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DC)(DG)(DC)(DC)(DG)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CCGGCGCCGG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DC n
1 6 DG n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DG n
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3GOJ
_struct_ref.pdbx_db_accession 3GOJ
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_seq_one_letter_code CCGGCGCCGG
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3GOJ A 1 ? 10 ? 3GOJ 1 ? 10 ? 1 10
2 1 3GOJ B 1 ? 10 ? 3GOJ 11 ? 20 ? 11 20
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
#
_exptl.entry_id 3GOJ
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 45.83
_exptl_crystal.density_Matthews 2.27
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.pH 7
_exptl_crystal_grow.temp 290
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_details 'BaCl2, MPD, NaCacodylate , pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.details
1 1 1 BaCl2 ? ? ?
1 2 1 MPD ? ? ?
1 3 1 'Na Cacodylate' ? ? ?
1 4 2 BaCl2 ? ? ?
1 5 2 MPD ? ? ?
1 6 2 'Na Cacodylate' ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'OXFORD SAPPHIRE CCD'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details 'multilayer optics'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'SEALED TUBE'
_diffrn_source.type 'OXFORD DIFFRACTION ENHANCE ULTRA'
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.5418
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
#
_reflns.entry_id 3GOJ
_reflns.d_resolution_high 2.601
_reflns.d_resolution_low 15.615
_reflns.limit_h_max 23
_reflns.limit_h_min -24
_reflns.limit_k_max 9
_reflns.limit_k_min 0
_reflns.limit_l_max 14
_reflns.limit_l_min 0
_reflns.number_all 1772
_reflns.number_obs 1757
_reflns.observed_criterion_sigma_F 1.00
_reflns.observed_criterion_sigma_I 1.00
_reflns.percent_possible_obs 98.600
_reflns.pdbx_Rmerge_I_obs 0.058
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate 21.448
_reflns.pdbx_redundancy 2.8
_reflns.R_free_details ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.601
_reflns_shell.d_res_low 2.668
_reflns_shell.percent_possible_obs ?
_reflns_shell.percent_possible_all 98.600
_reflns_shell.Rmerge_I_obs 0.193
_reflns_shell.meanI_over_sigI_obs 2.18
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_redundancy 2.4
_reflns_shell.number_unique_all 6667
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.ls_d_res_high 2.600
_refine.ls_d_res_low 15.615
_refine.pdbx_ls_sigma_F .
_refine.ls_percent_reflns_obs 98.600
_refine.ls_number_reflns_obs 1757
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.ls_R_factor_all 0.241
_refine.ls_R_factor_R_work 0.236
_refine.ls_R_factor_R_free 0.347
_refine.ls_percent_reflns_R_free 4.200
_refine.ls_number_reflns_R_free 74
_refine.B_iso_mean 21.444
_refine.aniso_B[1][1] -2.920
_refine.aniso_B[2][2] 3.290
_refine.aniso_B[3][3] -0.070
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.450
_refine.aniso_B[2][3] 0.000
_refine.correlation_coeff_Fo_to_Fc 0.937
_refine.correlation_coeff_Fo_to_Fc_free 0.877
_refine.pdbx_overall_ESU_R_Free 0.466
_refine.overall_SU_ML 0.329
_refine.overall_SU_B 16.111
_refine.solvent_model_details MASK
_refine.pdbx_solvent_vdw_probe_radii 1.200
_refine.pdbx_solvent_ion_probe_radii 0.800
_refine.pdbx_solvent_shrinkage_radii 0.800
_refine.entry_id 3GOJ
_refine.pdbx_ls_sigma_I ?
_refine.ls_number_reflns_all 1757
_refine.ls_R_factor_obs 0.241
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 'PDB entry 1P4Y'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model ?
_refine.details ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_overall_ESU_R ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 404
_refine_hist.pdbx_number_atoms_ligand 4
_refine_hist.number_atoms_solvent 23
_refine_hist.number_atoms_total 431
_refine_hist.d_res_high 2.600
_refine_hist.d_res_low 15.615
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.weight
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 452 0.009 0.021 ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 694 1.903 3.000 ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 78 0.068 0.200 ? 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 210 0.007 0.020 ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 109 0.218 0.200 ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 252 0.333 0.200 ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 24 0.272 0.200 ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined 3 0.351 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 30 0.168 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 19 0.240 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined 2 0.321 0.200 ? 'X-RAY DIFFRACTION' ?
r_scbond_it 510 1.533 3.000 ? 'X-RAY DIFFRACTION' ?
r_scangle_it 694 2.324 4.500 ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.d_res_high 2.601
_refine_ls_shell.d_res_low 2.668
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.percent_reflns_obs 99.240
_refine_ls_shell.number_reflns_R_work 123
_refine_ls_shell.R_factor_R_work 0.440
_refine_ls_shell.R_factor_R_free 0.450
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 7
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3GOJ
_struct.title 'Barium bound to the Holliday sequence d(CCGGCGCCGG)4'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3GOJ
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Holliday junction structure, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 2 ?
F N N 2 ?
G N N 3 ?
H N N 3 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A BA 22 ? 4 'BINDING SITE FOR RESIDUE BA A 22'
AC2 Software A BA 29 ? 2 'BINDING SITE FOR RESIDUE BA A 29'
AC3 Software A BA 32 ? 1 'BINDING SITE FOR RESIDUE BA A 32'
AC4 Software B BA 23 ? 2 'BINDING SITE FOR RESIDUE BA B 23'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 4 DG A 3 ? DG A 3 . ? 1_555 ?
2 AC1 4 DG A 4 ? DG A 4 . ? 1_555 ?
3 AC1 4 HOH G . ? HOH A 53 . ? 1_555 ?
4 AC1 4 HOH H . ? HOH B 27 . ? 1_555 ?
5 AC2 2 HOH G . ? HOH A 21 . ? 2_556 ?
6 AC2 2 DG B 4 ? DG B 14 . ? 2_556 ?
7 AC3 1 HOH G . ? HOH A 40 . ? 1_555 ?
8 AC4 2 HOH G . ? HOH A 26 . ? 1_555 ?
9 AC4 2 HOH H . ? HOH B 39 . ? 1_555 ?
#
_atom_sites.entry_id 3GOJ
_atom_sites.fract_transf_matrix[1][1] 0.0153
_atom_sites.fract_transf_matrix[1][2] 0.0000
_atom_sites.fract_transf_matrix[1][3] 0.0056
_atom_sites.fract_transf_matrix[2][1] 0.0000
_atom_sites.fract_transf_matrix[2][2] 0.0413
_atom_sites.fract_transf_matrix[2][3] -0.0000
_atom_sites.fract_transf_matrix[3][1] 0.0000
_atom_sites.fract_transf_matrix[3][2] 0.0000
_atom_sites.fract_transf_matrix[3][3] 0.0286
_atom_sites.fract_transf_vector[1] 0.0000
_atom_sites.fract_transf_vector[2] 0.0000
_atom_sites.fract_transf_vector[3] 0.0000
#
loop_
_atom_type.symbol
BA
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? -23.917 -2.530 33.217 1.00 29.24 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? -23.099 -3.638 33.545 1.00 26.55 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? -23.737 -4.874 32.970 1.00 26.19 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? -24.672 -4.540 31.919 1.00 25.85 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? -22.757 -5.816 32.310 1.00 27.16 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? -23.215 -7.122 32.539 1.00 28.11 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? -22.812 -5.475 30.826 1.00 26.12 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? -24.270 -5.103 30.675 1.00 24.12 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? -24.559 -4.151 29.559 1.00 22.77 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? -24.416 -4.544 28.226 1.00 22.91 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? -24.010 -5.691 27.975 1.00 22.66 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? -24.727 -3.642 27.246 1.00 22.78 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? -25.159 -2.412 27.550 1.00 22.41 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? -25.450 -1.550 26.573 1.00 21.70 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? -25.315 -2.008 28.902 1.00 23.08 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? -25.011 -2.899 29.851 1.00 23.07 ? 1 DC A C6 1
ATOM 17 P P . DC A 1 2 ? -22.176 -8.121 33.211 1.00 30.26 ? 2 DC A P 1
ATOM 18 O OP1 . DC A 1 2 ? -22.804 -9.472 33.165 1.00 30.26 ? 2 DC A OP1 1
ATOM 19 O OP2 . DC A 1 2 ? -21.736 -7.531 34.500 1.00 29.57 ? 2 DC A OP2 1
ATOM 20 O "O5'" . DC A 1 2 ? -20.900 -8.014 32.249 1.00 26.85 ? 2 DC A "O5'" 1
ATOM 21 C "C5'" . DC A 1 2 ? -20.495 -9.104 31.471 1.00 24.64 ? 2 DC A "C5'" 1
ATOM 22 C "C4'" . DC A 1 2 ? -19.464 -8.648 30.466 1.00 22.59 ? 2 DC A "C4'" 1
ATOM 23 O "O4'" . DC A 1 2 ? -19.911 -7.455 29.791 1.00 21.86 ? 2 DC A "O4'" 1
ATOM 24 C "C3'" . DC A 1 2 ? -18.138 -8.264 31.080 1.00 22.93 ? 2 DC A "C3'" 1
ATOM 25 O "O3'" . DC A 1 2 ? -17.190 -8.704 30.172 1.00 25.08 ? 2 DC A "O3'" 1
ATOM 26 C "C2'" . DC A 1 2 ? -18.196 -6.745 31.154 1.00 21.05 ? 2 DC A "C2'" 1
ATOM 27 C "C1'" . DC A 1 2 ? -18.891 -6.487 29.829 1.00 19.98 ? 2 DC A "C1'" 1
ATOM 28 N N1 . DC A 1 2 ? -19.552 -5.163 29.643 1.00 18.90 ? 2 DC A N1 1
ATOM 29 C C2 . DC A 1 2 ? -20.008 -4.812 28.369 1.00 18.52 ? 2 DC A C2 1
ATOM 30 O O2 . DC A 1 2 ? -19.841 -5.604 27.422 1.00 18.49 ? 2 DC A O2 1
ATOM 31 N N3 . DC A 1 2 ? -20.610 -3.602 28.214 1.00 18.07 ? 2 DC A N3 1
ATOM 32 C C4 . DC A 1 2 ? -20.764 -2.781 29.261 1.00 17.52 ? 2 DC A C4 1
ATOM 33 N N4 . DC A 1 2 ? -21.366 -1.603 29.081 1.00 17.89 ? 2 DC A N4 1
ATOM 34 C C5 . DC A 1 2 ? -20.305 -3.127 30.554 1.00 16.90 ? 2 DC A C5 1
ATOM 35 C C6 . DC A 1 2 ? -19.712 -4.311 30.693 1.00 18.03 ? 2 DC A C6 1
ATOM 36 P P . DG A 1 3 ? -16.508 -10.124 30.419 1.00 27.30 ? 3 DG A P 1
ATOM 37 O OP1 . DG A 1 3 ? -17.560 -11.122 30.765 1.00 25.85 ? 3 DG A OP1 1
ATOM 38 O OP2 . DG A 1 3 ? -15.340 -9.829 31.287 1.00 25.35 ? 3 DG A OP2 1
ATOM 39 O "O5'" . DG A 1 3 ? -15.960 -10.541 28.971 1.00 26.30 ? 3 DG A "O5'" 1
ATOM 40 C "C5'" . DG A 1 3 ? -16.863 -10.649 27.874 1.00 25.26 ? 3 DG A "C5'" 1
ATOM 41 C "C4'" . DG A 1 3 ? -16.261 -10.064 26.604 1.00 24.85 ? 3 DG A "C4'" 1
ATOM 42 O "O4'" . DG A 1 3 ? -16.482 -8.627 26.476 1.00 22.96 ? 3 DG A "O4'" 1
ATOM 43 C "C3'" . DG A 1 3 ? -14.760 -10.252 26.424 1.00 25.80 ? 3 DG A "C3'" 1
ATOM 44 O "O3'" . DG A 1 3 ? -14.604 -10.394 25.037 1.00 28.40 ? 3 DG A "O3'" 1
ATOM 45 C "C2'" . DG A 1 3 ? -14.178 -8.930 26.933 1.00 23.86 ? 3 DG A "C2'" 1
ATOM 46 C "C1'" . DG A 1 3 ? -15.245 -7.919 26.485 1.00 21.20 ? 3 DG A "C1'" 1
ATOM 47 N N9 . DG A 1 3 ? -15.532 -6.813 27.387 1.00 20.57 ? 3 DG A N9 1
ATOM 48 C C8 . DG A 1 3 ? -15.339 -6.800 28.748 1.00 19.34 ? 3 DG A C8 1
ATOM 49 N N7 . DG A 1 3 ? -15.727 -5.691 29.299 1.00 19.38 ? 3 DG A N7 1
ATOM 50 C C5 . DG A 1 3 ? -16.231 -4.932 28.246 1.00 18.87 ? 3 DG A C5 1
ATOM 51 C C6 . DG A 1 3 ? -16.804 -3.637 28.247 1.00 18.45 ? 3 DG A C6 1
ATOM 52 O O6 . DG A 1 3 ? -16.982 -2.898 29.221 1.00 18.95 ? 3 DG A O6 1
ATOM 53 N N1 . DG A 1 3 ? -17.194 -3.214 26.974 1.00 18.36 ? 3 DG A N1 1
ATOM 54 C C2 . DG A 1 3 ? -17.042 -3.966 25.835 1.00 18.76 ? 3 DG A C2 1
ATOM 55 N N2 . DG A 1 3 ? -17.469 -3.396 24.700 1.00 19.11 ? 3 DG A N2 1
ATOM 56 N N3 . DG A 1 3 ? -16.505 -5.191 25.817 1.00 19.00 ? 3 DG A N3 1
ATOM 57 C C4 . DG A 1 3 ? -16.124 -5.611 27.056 1.00 19.25 ? 3 DG A C4 1
ATOM 58 P P . DG A 1 4 ? -13.333 -11.075 24.358 1.00 31.06 ? 4 DG A P 1
ATOM 59 O OP1 . DG A 1 4 ? -13.782 -12.418 23.925 1.00 31.48 ? 4 DG A OP1 1
ATOM 60 O OP2 . DG A 1 4 ? -12.145 -10.928 25.237 1.00 30.86 ? 4 DG A OP2 1
ATOM 61 O "O5'" . DG A 1 4 ? -13.109 -10.171 23.052 1.00 29.43 ? 4 DG A "O5'" 1
ATOM 62 C "C5'" . DG A 1 4 ? -14.035 -9.160 22.644 1.00 27.78 ? 4 DG A "C5'" 1
ATOM 63 C "C4'" . DG A 1 4 ? -13.328 -7.857 22.263 1.00 26.57 ? 4 DG A "C4'" 1
ATOM 64 O "O4'" . DG A 1 4 ? -13.596 -6.828 23.253 1.00 24.00 ? 4 DG A "O4'" 1
ATOM 65 C "C3'" . DG A 1 4 ? -11.797 -7.880 22.172 1.00 27.13 ? 4 DG A "C3'" 1
ATOM 66 O "O3'" . DG A 1 4 ? -11.356 -6.852 21.320 1.00 29.96 ? 4 DG A "O3'" 1
ATOM 67 C "C2'" . DG A 1 4 ? -11.374 -7.497 23.570 1.00 24.68 ? 4 DG A "C2'" 1
ATOM 68 C "C1'" . DG A 1 4 ? -12.346 -6.329 23.677 1.00 20.65 ? 4 DG A "C1'" 1
ATOM 69 N N9 . DG A 1 4 ? -12.464 -5.821 25.015 1.00 18.04 ? 4 DG A N9 1
ATOM 70 C C8 . DG A 1 4 ? -12.036 -6.432 26.173 1.00 16.79 ? 4 DG A C8 1
ATOM 71 N N7 . DG A 1 4 ? -12.275 -5.714 27.229 1.00 17.02 ? 4 DG A N7 1
ATOM 72 C C5 . DG A 1 4 ? -12.875 -4.575 26.710 1.00 16.26 ? 4 DG A C5 1
ATOM 73 C C6 . DG A 1 4 ? -13.341 -3.458 27.393 1.00 16.61 ? 4 DG A C6 1
ATOM 74 O O6 . DG A 1 4 ? -13.299 -3.296 28.623 1.00 18.82 ? 4 DG A O6 1
ATOM 75 N N1 . DG A 1 4 ? -13.878 -2.511 26.513 1.00 16.37 ? 4 DG A N1 1
ATOM 76 C C2 . DG A 1 4 ? -13.954 -2.651 25.147 1.00 14.43 ? 4 DG A C2 1
ATOM 77 N N2 . DG A 1 4 ? -14.503 -1.635 24.492 1.00 15.87 ? 4 DG A N2 1
ATOM 78 N N3 . DG A 1 4 ? -13.521 -3.705 24.487 1.00 13.83 ? 4 DG A N3 1
ATOM 79 C C4 . DG A 1 4 ? -13.000 -4.614 25.345 1.00 15.94 ? 4 DG A C4 1
ATOM 80 P P . DC A 1 5 ? -10.786 -7.245 19.887 1.00 33.27 ? 5 DC A P 1
ATOM 81 O OP1 . DC A 1 5 ? -11.598 -8.403 19.400 1.00 31.97 ? 5 DC A OP1 1
ATOM 82 O OP2 . DC A 1 5 ? -9.307 -7.343 20.061 1.00 31.65 ? 5 DC A OP2 1
ATOM 83 O "O5'" . DC A 1 5 ? -11.131 -5.967 18.972 1.00 29.17 ? 5 DC A "O5'" 1
ATOM 84 C "C5'" . DC A 1 5 ? -12.377 -5.329 19.072 1.00 26.56 ? 5 DC A "C5'" 1
ATOM 85 C "C4'" . DC A 1 5 ? -12.124 -3.839 19.050 1.00 25.32 ? 5 DC A "C4'" 1
ATOM 86 O "O4'" . DC A 1 5 ? -11.997 -3.298 20.387 1.00 24.31 ? 5 DC A "O4'" 1
ATOM 87 C "C3'" . DC A 1 5 ? -10.836 -3.465 18.349 1.00 25.13 ? 5 DC A "C3'" 1
ATOM 88 O "O3'" . DC A 1 5 ? -11.176 -2.397 17.524 1.00 25.22 ? 5 DC A "O3'" 1
ATOM 89 C "C2'" . DC A 1 5 ? -9.858 -3.060 19.457 1.00 24.05 ? 5 DC A "C2'" 1
ATOM 90 C "C1'" . DC A 1 5 ? -10.792 -2.569 20.562 1.00 22.13 ? 5 DC A "C1'" 1
ATOM 91 N N1 . DC A 1 5 ? -10.395 -2.848 21.984 1.00 19.41 ? 5 DC A N1 1
ATOM 92 C C2 . DC A 1 5 ? -10.791 -1.964 22.996 1.00 19.55 ? 5 DC A C2 1
ATOM 93 O O2 . DC A 1 5 ? -11.427 -0.937 22.720 1.00 19.65 ? 5 DC A O2 1
ATOM 94 N N3 . DC A 1 5 ? -10.451 -2.243 24.279 1.00 19.63 ? 5 DC A N3 1
ATOM 95 C C4 . DC A 1 5 ? -9.766 -3.350 24.564 1.00 18.65 ? 5 DC A C4 1
ATOM 96 N N4 . DC A 1 5 ? -9.464 -3.576 25.843 1.00 19.29 ? 5 DC A N4 1
ATOM 97 C C5 . DC A 1 5 ? -9.366 -4.263 23.552 1.00 18.12 ? 5 DC A C5 1
ATOM 98 C C6 . DC A 1 5 ? -9.703 -3.976 22.293 1.00 17.84 ? 5 DC A C6 1
ATOM 99 P P . DG A 1 6 ? -10.047 -1.841 16.562 1.00 26.16 ? 6 DG A P 1
ATOM 100 O OP1 . DG A 1 6 ? -10.726 -1.430 15.318 1.00 27.27 ? 6 DG A OP1 1
ATOM 101 O OP2 . DG A 1 6 ? -8.911 -2.809 16.562 1.00 24.55 ? 6 DG A OP2 1
ATOM 102 O "O5'" . DG A 1 6 ? -9.626 -0.491 17.303 1.00 23.34 ? 6 DG A "O5'" 1
ATOM 103 C "C5'" . DG A 1 6 ? -10.630 0.478 17.573 1.00 19.34 ? 6 DG A "C5'" 1
ATOM 104 C "C4'" . DG A 1 6 ? -10.062 1.538 18.494 1.00 16.79 ? 6 DG A "C4'" 1
ATOM 105 O "O4'" . DG A 1 6 ? -9.693 0.934 19.762 1.00 15.62 ? 6 DG A "O4'" 1
ATOM 106 C "C3'" . DG A 1 6 ? -8.798 2.205 17.963 1.00 16.02 ? 6 DG A "C3'" 1
ATOM 107 O "O3'" . DG A 1 6 ? -8.927 3.611 18.132 1.00 17.13 ? 6 DG A "O3'" 1
ATOM 108 C "C2'" . DG A 1 6 ? -7.678 1.615 18.834 1.00 14.61 ? 6 DG A "C2'" 1
ATOM 109 C "C1'" . DG A 1 6 ? -8.415 1.409 20.151 1.00 12.88 ? 6 DG A "C1'" 1
ATOM 110 N N9 . DG A 1 6 ? -7.900 0.390 21.058 1.00 11.95 ? 6 DG A N9 1
ATOM 111 C C8 . DG A 1 6 ? -7.407 -0.834 20.712 1.00 10.93 ? 6 DG A C8 1
ATOM 112 N N7 . DG A 1 6 ? -7.042 -1.557 21.725 1.00 10.59 ? 6 DG A N7 1
ATOM 113 C C5 . DG A 1 6 ? -7.332 -0.767 22.834 1.00 11.13 ? 6 DG A C5 1
ATOM 114 C C6 . DG A 1 6 ? -7.153 -1.041 24.222 1.00 10.40 ? 6 DG A C6 1
ATOM 115 O O6 . DG A 1 6 ? -6.689 -2.078 24.751 1.00 10.83 ? 6 DG A O6 1
ATOM 116 N N1 . DG A 1 6 ? -7.578 0.024 25.010 1.00 9.30 ? 6 DG A N1 1
ATOM 117 C C2 . DG A 1 6 ? -8.105 1.196 24.513 1.00 10.40 ? 6 DG A C2 1
ATOM 118 N N2 . DG A 1 6 ? -8.467 2.113 25.426 1.00 11.15 ? 6 DG A N2 1
ATOM 119 N N3 . DG A 1 6 ? -8.273 1.471 23.218 1.00 10.65 ? 6 DG A N3 1
ATOM 120 C C4 . DG A 1 6 ? -7.869 0.439 22.435 1.00 11.30 ? 6 DG A C4 1
ATOM 121 P P . DC A 1 7 ? -9.547 4.589 17.018 1.00 17.16 ? 7 DC A P 1
ATOM 122 O OP1 . DC A 1 7 ? -9.576 5.975 17.545 1.00 16.63 ? 7 DC A OP1 1
ATOM 123 O OP2 . DC A 1 7 ? -10.802 3.944 16.541 1.00 18.21 ? 7 DC A OP2 1
ATOM 124 O "O5'" . DC A 1 7 ? -8.428 4.536 15.875 1.00 16.58 ? 7 DC A "O5'" 1
ATOM 125 C "C5'" . DC A 1 7 ? -7.367 5.473 15.892 1.00 16.43 ? 7 DC A "C5'" 1
ATOM 126 C "C4'" . DC A 1 7 ? -6.646 5.445 14.563 1.00 16.51 ? 7 DC A "C4'" 1
ATOM 127 O "O4'" . DC A 1 7 ? -6.689 4.084 14.103 1.00 15.40 ? 7 DC A "O4'" 1
ATOM 128 C "C3'" . DC A 1 7 ? -7.309 6.259 13.473 1.00 17.08 ? 7 DC A "C3'" 1
ATOM 129 O "O3'" . DC A 1 7 ? -6.332 7.011 12.803 1.00 20.24 ? 7 DC A "O3'" 1
ATOM 130 C "C2'" . DC A 1 7 ? -7.958 5.240 12.549 1.00 15.49 ? 7 DC A "C2'" 1
ATOM 131 C "C1'" . DC A 1 7 ? -7.098 4.024 12.763 1.00 13.55 ? 7 DC A "C1'" 1
ATOM 132 N N1 . DC A 1 7 ? -7.768 2.710 12.546 1.00 12.43 ? 7 DC A N1 1
ATOM 133 C C2 . DC A 1 7 ? -7.803 2.188 11.251 1.00 12.64 ? 7 DC A C2 1
ATOM 134 O O2 . DC A 1 7 ? -7.308 2.853 10.328 1.00 12.35 ? 7 DC A O2 1
ATOM 135 N N3 . DC A 1 7 ? -8.391 0.971 11.056 1.00 13.25 ? 7 DC A N3 1
ATOM 136 C C4 . DC A 1 7 ? -8.920 0.307 12.099 1.00 12.72 ? 7 DC A C4 1
ATOM 137 N N4 . DC A 1 7 ? -9.495 -0.875 11.866 1.00 12.25 ? 7 DC A N4 1
ATOM 138 C C5 . DC A 1 7 ? -8.889 0.830 13.427 1.00 10.58 ? 7 DC A C5 1
ATOM 139 C C6 . DC A 1 7 ? -8.304 2.018 13.594 1.00 10.89 ? 7 DC A C6 1
ATOM 140 P P . DC A 1 8 ? -6.419 8.613 12.873 1.00 24.05 ? 8 DC A P 1
ATOM 141 O OP1 . DC A 1 8 ? -5.044 9.073 12.533 1.00 23.35 ? 8 DC A OP1 1
ATOM 142 O OP2 . DC A 1 8 ? -7.082 9.037 14.141 1.00 22.13 ? 8 DC A OP2 1
ATOM 143 O "O5'" . DC A 1 8 ? -7.448 9.016 11.717 1.00 21.43 ? 8 DC A "O5'" 1
ATOM 144 C "C5'" . DC A 1 8 ? -7.147 8.882 10.326 1.00 19.61 ? 8 DC A "C5'" 1
ATOM 145 C "C4'" . DC A 1 8 ? -8.434 8.892 9.515 1.00 18.01 ? 8 DC A "C4'" 1
ATOM 146 O "O4'" . DC A 1 8 ? -9.113 7.604 9.615 1.00 17.45 ? 8 DC A "O4'" 1
ATOM 147 C "C3'" . DC A 1 8 ? -9.480 9.908 9.940 1.00 17.66 ? 8 DC A "C3'" 1
ATOM 148 O "O3'" . DC A 1 8 ? -10.229 10.289 8.791 1.00 20.96 ? 8 DC A "O3'" 1
ATOM 149 C "C2'" . DC A 1 8 ? -10.329 9.072 10.896 1.00 17.39 ? 8 DC A "C2'" 1
ATOM 150 C "C1'" . DC A 1 8 ? -10.418 7.771 10.110 1.00 15.89 ? 8 DC A "C1'" 1
ATOM 151 N N1 . DC A 1 8 ? -10.769 6.530 10.844 1.00 14.28 ? 8 DC A N1 1
ATOM 152 C C2 . DC A 1 8 ? -10.977 5.335 10.138 1.00 13.92 ? 8 DC A C2 1
ATOM 153 O O2 . DC A 1 8 ? -10.874 5.336 8.913 1.00 14.13 ? 8 DC A O2 1
ATOM 154 N N3 . DC A 1 8 ? -11.292 4.193 10.803 1.00 13.53 ? 8 DC A N3 1
ATOM 155 C C4 . DC A 1 8 ? -11.407 4.228 12.128 1.00 14.63 ? 8 DC A C4 1
ATOM 156 N N4 . DC A 1 8 ? -11.709 3.099 12.770 1.00 15.80 ? 8 DC A N4 1
ATOM 157 C C5 . DC A 1 8 ? -11.202 5.427 12.877 1.00 14.96 ? 8 DC A C5 1
ATOM 158 C C6 . DC A 1 8 ? -10.893 6.548 12.201 1.00 15.03 ? 8 DC A C6 1
ATOM 159 P P . DG A 1 9 ? -9.830 11.567 7.903 1.00 22.01 ? 9 DG A P 1
ATOM 160 O OP1 . DG A 1 9 ? -8.383 11.536 7.599 1.00 21.38 ? 9 DG A OP1 1
ATOM 161 O OP2 . DG A 1 9 ? -10.462 12.724 8.582 1.00 21.13 ? 9 DG A OP2 1
ATOM 162 O "O5'" . DG A 1 9 ? -10.565 11.317 6.527 1.00 20.14 ? 9 DG A "O5'" 1
ATOM 163 C "C5'" . DG A 1 9 ? -10.281 10.195 5.717 1.00 21.64 ? 9 DG A "C5'" 1
ATOM 164 C "C4'" . DG A 1 9 ? -11.595 9.770 5.066 1.00 23.68 ? 9 DG A "C4'" 1
ATOM 165 O "O4'" . DG A 1 9 ? -12.244 8.781 5.923 1.00 23.14 ? 9 DG A "O4'" 1
ATOM 166 C "C3'" . DG A 1 9 ? -12.612 10.914 4.894 1.00 24.11 ? 9 DG A "C3'" 1
ATOM 167 O "O3'" . DG A 1 9 ? -13.556 10.698 3.841 1.00 25.54 ? 9 DG A "O3'" 1
ATOM 168 C "C2'" . DG A 1 9 ? -13.326 10.869 6.244 1.00 23.42 ? 9 DG A "C2'" 1
ATOM 169 C "C1'" . DG A 1 9 ? -13.426 9.356 6.443 1.00 21.64 ? 9 DG A "C1'" 1
ATOM 170 N N9 . DG A 1 9 ? -13.570 8.957 7.827 1.00 20.72 ? 9 DG A N9 1
ATOM 171 C C8 . DG A 1 9 ? -13.453 9.753 8.940 1.00 20.96 ? 9 DG A C8 1
ATOM 172 N N7 . DG A 1 9 ? -13.648 9.108 10.053 1.00 20.77 ? 9 DG A N7 1
ATOM 173 C C5 . DG A 1 9 ? -13.903 7.808 9.641 1.00 19.82 ? 9 DG A C5 1
ATOM 174 C C6 . DG A 1 9 ? -14.175 6.659 10.403 1.00 20.10 ? 9 DG A C6 1
ATOM 175 O O6 . DG A 1 9 ? -14.261 6.559 11.633 1.00 21.22 ? 9 DG A O6 1
ATOM 176 N N1 . DG A 1 9 ? -14.365 5.545 9.594 1.00 20.07 ? 9 DG A N1 1
ATOM 177 C C2 . DG A 1 9 ? -14.301 5.543 8.225 1.00 18.77 ? 9 DG A C2 1
ATOM 178 N N2 . DG A 1 9 ? -14.525 4.373 7.628 1.00 19.59 ? 9 DG A N2 1
ATOM 179 N N3 . DG A 1 9 ? -14.042 6.611 7.499 1.00 18.64 ? 9 DG A N3 1
ATOM 180 C C4 . DG A 1 9 ? -13.854 7.699 8.275 1.00 19.50 ? 9 DG A C4 1
ATOM 181 P P . DG A 1 10 ? -13.325 11.102 2.307 1.00 25.51 ? 10 DG A P 1
ATOM 182 O OP1 . DG A 1 10 ? -11.965 10.711 1.879 1.00 26.23 ? 10 DG A OP1 1
ATOM 183 O OP2 . DG A 1 10 ? -13.815 12.482 2.145 1.00 25.74 ? 10 DG A OP2 1
ATOM 184 O "O5'" . DG A 1 10 ? -14.346 10.115 1.584 1.00 24.34 ? 10 DG A "O5'" 1
ATOM 185 C "C5'" . DG A 1 10 ? -14.184 8.707 1.679 1.00 23.01 ? 10 DG A "C5'" 1
ATOM 186 C "C4'" . DG A 1 10 ? -15.532 8.018 1.803 1.00 22.46 ? 10 DG A "C4'" 1
ATOM 187 O "O4'" . DG A 1 10 ? -15.876 7.767 3.194 1.00 22.69 ? 10 DG A "O4'" 1
ATOM 188 C "C3'" . DG A 1 10 ? -16.713 8.777 1.236 1.00 22.16 ? 10 DG A "C3'" 1
ATOM 189 O "O3'" . DG A 1 10 ? -17.560 7.814 0.639 1.00 26.06 ? 10 DG A "O3'" 1
ATOM 190 C "C2'" . DG A 1 10 ? -17.366 9.421 2.452 1.00 21.85 ? 10 DG A "C2'" 1
ATOM 191 C "C1'" . DG A 1 10 ? -17.117 8.370 3.531 1.00 21.11 ? 10 DG A "C1'" 1
ATOM 192 N N9 . DG A 1 10 ? -17.006 8.857 4.913 1.00 19.76 ? 10 DG A N9 1
ATOM 193 C C8 . DG A 1 10 ? -16.627 10.106 5.345 1.00 19.09 ? 10 DG A C8 1
ATOM 194 N N7 . DG A 1 10 ? -16.612 10.227 6.645 1.00 19.27 ? 10 DG A N7 1
ATOM 195 C C5 . DG A 1 10 ? -17.008 8.976 7.099 1.00 19.79 ? 10 DG A C5 1
ATOM 196 C C6 . DG A 1 10 ? -17.181 8.493 8.422 1.00 20.97 ? 10 DG A C6 1
ATOM 197 O O6 . DG A 1 10 ? -16.996 9.129 9.471 1.00 22.49 ? 10 DG A O6 1
ATOM 198 N N1 . DG A 1 10 ? -17.592 7.154 8.466 1.00 19.62 ? 10 DG A N1 1
ATOM 199 C C2 . DG A 1 10 ? -17.809 6.384 7.350 1.00 18.55 ? 10 DG A C2 1
ATOM 200 N N2 . DG A 1 10 ? -18.212 5.126 7.547 1.00 18.76 ? 10 DG A N2 1
ATOM 201 N N3 . DG A 1 10 ? -17.647 6.825 6.109 1.00 19.08 ? 10 DG A N3 1
ATOM 202 C C4 . DG A 1 10 ? -17.251 8.123 6.052 1.00 19.15 ? 10 DG A C4 1
ATOM 203 O "O5'" . DC B 1 1 ? 4.969 2.755 19.015 1.00 23.40 ? 11 DC B "O5'" 1
ATOM 204 C "C5'" . DC B 1 1 ? 5.985 1.742 19.101 1.00 23.74 ? 11 DC B "C5'" 1
ATOM 205 C "C4'" . DC B 1 1 ? 6.822 1.855 20.369 1.00 23.29 ? 11 DC B "C4'" 1
ATOM 206 O "O4'" . DC B 1 1 ? 6.745 3.202 20.904 1.00 21.73 ? 11 DC B "O4'" 1
ATOM 207 C "C3'" . DC B 1 1 ? 6.388 0.946 21.513 1.00 23.36 ? 11 DC B "C3'" 1
ATOM 208 O "O3'" . DC B 1 1 ? 7.523 0.376 22.085 1.00 24.23 ? 11 DC B "O3'" 1
ATOM 209 C "C2'" . DC B 1 1 ? 5.723 1.877 22.523 1.00 22.01 ? 11 DC B "C2'" 1
ATOM 210 C "C1'" . DC B 1 1 ? 6.489 3.158 22.284 1.00 20.14 ? 11 DC B "C1'" 1
ATOM 211 N N1 . DC B 1 1 ? 5.770 4.390 22.594 1.00 18.99 ? 11 DC B N1 1
ATOM 212 C C2 . DC B 1 1 ? 5.631 4.823 23.921 1.00 18.89 ? 11 DC B C2 1
ATOM 213 O O2 . DC B 1 1 ? 6.106 4.129 24.836 1.00 19.84 ? 11 DC B O2 1
ATOM 214 N N3 . DC B 1 1 ? 4.976 5.993 24.158 1.00 18.05 ? 11 DC B N3 1
ATOM 215 C C4 . DC B 1 1 ? 4.490 6.699 23.130 1.00 18.77 ? 11 DC B C4 1
ATOM 216 N N4 . DC B 1 1 ? 3.862 7.844 23.370 1.00 19.12 ? 11 DC B N4 1
ATOM 217 C C5 . DC B 1 1 ? 4.626 6.272 21.783 1.00 18.96 ? 11 DC B C5 1
ATOM 218 C C6 . DC B 1 1 ? 5.278 5.124 21.565 1.00 18.83 ? 11 DC B C6 1
ATOM 219 P P . DC B 1 2 ? 7.378 -1.020 22.835 1.00 27.33 ? 12 DC B P 1
ATOM 220 O OP1 . DC B 1 2 ? 8.727 -1.339 23.383 1.00 27.38 ? 12 DC B OP1 1
ATOM 221 O OP2 . DC B 1 2 ? 6.668 -1.985 21.945 1.00 26.08 ? 12 DC B OP2 1
ATOM 222 O "O5'" . DC B 1 2 ? 6.386 -0.657 24.051 1.00 26.33 ? 12 DC B "O5'" 1
ATOM 223 C "C5'" . DC B 1 2 ? 6.272 -1.526 25.188 1.00 22.68 ? 12 DC B "C5'" 1
ATOM 224 C "C4'" . DC B 1 2 ? 4.933 -1.386 25.905 1.00 19.59 ? 12 DC B "C4'" 1
ATOM 225 O "O4'" . DC B 1 2 ? 4.328 -0.082 25.685 1.00 16.80 ? 12 DC B "O4'" 1
ATOM 226 C "C3'" . DC B 1 2 ? 3.886 -2.401 25.486 1.00 19.13 ? 12 DC B "C3'" 1
ATOM 227 O "O3'" . DC B 1 2 ? 3.109 -2.844 26.630 1.00 22.71 ? 12 DC B "O3'" 1
ATOM 228 C "C2'" . DC B 1 2 ? 3.063 -1.585 24.498 1.00 16.97 ? 12 DC B "C2'" 1
ATOM 229 C "C1'" . DC B 1 2 ? 3.017 -0.238 25.194 1.00 14.68 ? 12 DC B "C1'" 1
ATOM 230 N N1 . DC B 1 2 ? 2.646 0.940 24.323 1.00 13.08 ? 12 DC B N1 1
ATOM 231 C C2 . DC B 1 2 ? 2.375 2.176 24.912 1.00 10.90 ? 12 DC B C2 1
ATOM 232 O O2 . DC B 1 2 ? 2.444 2.295 26.135 1.00 10.28 ? 12 DC B O2 1
ATOM 233 N N3 . DC B 1 2 ? 2.040 3.222 24.130 1.00 10.70 ? 12 DC B N3 1
ATOM 234 C C4 . DC B 1 2 ? 1.968 3.090 22.806 1.00 13.03 ? 12 DC B C4 1
ATOM 235 N N4 . DC B 1 2 ? 1.630 4.174 22.085 1.00 13.96 ? 12 DC B N4 1
ATOM 236 C C5 . DC B 1 2 ? 2.236 1.845 22.163 1.00 12.07 ? 12 DC B C5 1
ATOM 237 C C6 . DC B 1 2 ? 2.566 0.814 22.958 1.00 13.20 ? 12 DC B C6 1
ATOM 238 P P . DG B 1 3 ? 3.412 -4.244 27.381 1.00 24.04 ? 13 DG B P 1
ATOM 239 O OP1 . DG B 1 3 ? 4.890 -4.375 27.343 1.00 22.32 ? 13 DG B OP1 1
ATOM 240 O OP2 . DG B 1 3 ? 2.503 -5.290 26.856 1.00 22.10 ? 13 DG B OP2 1
ATOM 241 O "O5'" . DG B 1 3 ? 2.898 -4.026 28.881 1.00 23.46 ? 13 DG B "O5'" 1
ATOM 242 C "C5'" . DG B 1 3 ? 3.162 -2.836 29.629 1.00 23.99 ? 13 DG B "C5'" 1
ATOM 243 C "C4'" . DG B 1 3 ? 1.884 -2.274 30.247 1.00 23.63 ? 13 DG B "C4'" 1
ATOM 244 O "O4'" . DG B 1 3 ? 1.274 -1.345 29.309 1.00 23.29 ? 13 DG B "O4'" 1
ATOM 245 C "C3'" . DG B 1 3 ? 0.779 -3.269 30.584 1.00 23.90 ? 13 DG B "C3'" 1
ATOM 246 O "O3'" . DG B 1 3 ? -0.093 -2.697 31.530 1.00 26.49 ? 13 DG B "O3'" 1
ATOM 247 C "C2'" . DG B 1 3 ? 0.038 -3.346 29.267 1.00 23.21 ? 13 DG B "C2'" 1
ATOM 248 C "C1'" . DG B 1 3 ? 0.008 -1.851 28.953 1.00 21.72 ? 13 DG B "C1'" 1
ATOM 249 N N9 . DG B 1 3 ? -0.191 -1.539 27.556 1.00 21.17 ? 13 DG B N9 1
ATOM 250 C C8 . DG B 1 3 ? -0.058 -2.397 26.487 1.00 21.27 ? 13 DG B C8 1
ATOM 251 N N7 . DG B 1 3 ? -0.301 -1.831 25.346 1.00 21.30 ? 13 DG B N7 1
ATOM 252 C C5 . DG B 1 3 ? -0.607 -0.515 25.695 1.00 20.63 ? 13 DG B C5 1
ATOM 253 C C6 . DG B 1 3 ? -0.957 0.568 24.869 1.00 20.60 ? 13 DG B C6 1
ATOM 254 O O6 . DG B 1 3 ? -1.051 0.534 23.634 1.00 21.83 ? 13 DG B O6 1
ATOM 255 N N1 . DG B 1 3 ? -1.192 1.740 25.594 1.00 20.13 ? 13 DG B N1 1
ATOM 256 C C2 . DG B 1 3 ? -1.101 1.834 26.969 1.00 19.95 ? 13 DG B C2 1
ATOM 257 N N2 . DG B 1 3 ? -1.357 3.025 27.517 1.00 20.02 ? 13 DG B N2 1
ATOM 258 N N3 . DG B 1 3 ? -0.766 0.822 27.761 1.00 20.73 ? 13 DG B N3 1
ATOM 259 C C4 . DG B 1 3 ? -0.539 -0.317 27.051 1.00 20.75 ? 13 DG B C4 1
ATOM 260 P P . DG B 1 4 ? -0.057 -3.121 33.071 1.00 28.35 ? 14 DG B P 1
ATOM 261 O OP1 . DG B 1 4 ? 1.235 -2.682 33.661 1.00 26.95 ? 14 DG B OP1 1
ATOM 262 O OP2 . DG B 1 4 ? -0.518 -4.531 33.103 1.00 27.21 ? 14 DG B OP2 1
ATOM 263 O "O5'" . DG B 1 4 ? -1.165 -2.188 33.716 1.00 25.20 ? 14 DG B "O5'" 1
ATOM 264 C "C5'" . DG B 1 4 ? -1.026 -0.804 33.556 1.00 25.68 ? 14 DG B "C5'" 1
ATOM 265 C "C4'" . DG B 1 4 ? -2.341 -0.269 33.060 1.00 26.05 ? 14 DG B "C4'" 1
ATOM 266 O "O4'" . DG B 1 4 ? -2.471 -0.434 31.632 1.00 26.42 ? 14 DG B "O4'" 1
ATOM 267 C "C3'" . DG B 1 4 ? -3.543 -1.005 33.614 1.00 27.88 ? 14 DG B "C3'" 1
ATOM 268 O "O3'" . DG B 1 4 ? -4.396 0.056 33.905 1.00 30.32 ? 14 DG B "O3'" 1
ATOM 269 C "C2'" . DG B 1 4 ? -4.048 -1.909 32.473 1.00 26.26 ? 14 DG B "C2'" 1
ATOM 270 C "C1'" . DG B 1 4 ? -3.755 -0.965 31.319 1.00 24.50 ? 14 DG B "C1'" 1
ATOM 271 N N9 . DG B 1 4 ? -3.682 -1.494 29.962 1.00 22.74 ? 14 DG B N9 1
ATOM 272 C C8 . DG B 1 4 ? -3.316 -2.745 29.556 1.00 22.69 ? 14 DG B C8 1
ATOM 273 N N7 . DG B 1 4 ? -3.306 -2.879 28.257 1.00 22.51 ? 14 DG B N7 1
ATOM 274 C C5 . DG B 1 4 ? -3.684 -1.638 27.784 1.00 21.78 ? 14 DG B C5 1
ATOM 275 C C6 . DG B 1 4 ? -3.857 -1.190 26.460 1.00 22.80 ? 14 DG B C6 1
ATOM 276 O O6 . DG B 1 4 ? -3.705 -1.847 25.425 1.00 24.40 ? 14 DG B O6 1
ATOM 277 N N1 . DG B 1 4 ? -4.243 0.145 26.394 1.00 22.60 ? 14 DG B N1 1
ATOM 278 C C2 . DG B 1 4 ? -4.444 0.949 27.493 1.00 22.26 ? 14 DG B C2 1
ATOM 279 N N2 . DG B 1 4 ? -4.820 2.213 27.255 1.00 22.15 ? 14 DG B N2 1
ATOM 280 N N3 . DG B 1 4 ? -4.288 0.532 28.747 1.00 22.25 ? 14 DG B N3 1
ATOM 281 C C4 . DG B 1 4 ? -3.911 -0.771 28.816 1.00 21.83 ? 14 DG B C4 1
ATOM 282 P P . DC B 1 5 ? -5.437 -0.039 35.098 1.00 31.79 ? 15 DC B P 1
ATOM 283 O OP1 . DC B 1 5 ? -4.778 0.408 36.351 1.00 32.47 ? 15 DC B OP1 1
ATOM 284 O OP2 . DC B 1 5 ? -6.088 -1.370 35.008 1.00 31.83 ? 15 DC B OP2 1
ATOM 285 O "O5'" . DC B 1 5 ? -6.431 1.115 34.640 1.00 29.77 ? 15 DC B "O5'" 1
ATOM 286 C "C5'" . DC B 1 5 ? -5.864 2.343 34.228 1.00 28.15 ? 15 DC B "C5'" 1
ATOM 287 C "C4'" . DC B 1 5 ? -6.678 2.832 33.055 1.00 27.57 ? 15 DC B "C4'" 1
ATOM 288 O "O4'" . DC B 1 5 ? -6.575 1.941 31.920 1.00 25.84 ? 15 DC B "O4'" 1
ATOM 289 C "C3'" . DC B 1 5 ? -8.166 2.890 33.366 1.00 28.36 ? 15 DC B "C3'" 1
ATOM 290 O "O3'" . DC B 1 5 ? -8.462 4.281 33.264 1.00 30.49 ? 15 DC B "O3'" 1
ATOM 291 C "C2'" . DC B 1 5 ? -8.813 1.927 32.342 1.00 25.76 ? 15 DC B "C2'" 1
ATOM 292 C "C1'" . DC B 1 5 ? -7.797 1.977 31.215 1.00 21.85 ? 15 DC B "C1'" 1
ATOM 293 N N1 . DC B 1 5 ? -7.678 0.882 30.199 1.00 19.40 ? 15 DC B N1 1
ATOM 294 C C2 . DC B 1 5 ? -7.897 1.170 28.825 1.00 19.46 ? 15 DC B C2 1
ATOM 295 O O2 . DC B 1 5 ? -8.246 2.316 28.449 1.00 19.37 ? 15 DC B O2 1
ATOM 296 N N3 . DC B 1 5 ? -7.728 0.159 27.922 1.00 17.30 ? 15 DC B N3 1
ATOM 297 C C4 . DC B 1 5 ? -7.349 -1.053 28.339 1.00 16.87 ? 15 DC B C4 1
ATOM 298 N N4 . DC B 1 5 ? -7.196 -1.989 27.406 1.00 17.84 ? 15 DC B N4 1
ATOM 299 C C5 . DC B 1 5 ? -7.105 -1.359 29.716 1.00 15.75 ? 15 DC B C5 1
ATOM 300 C C6 . DC B 1 5 ? -7.272 -0.363 30.591 1.00 16.51 ? 15 DC B C6 1
ATOM 301 P P . DG B 1 6 ? -9.941 4.876 33.192 1.00 32.76 ? 16 DG B P 1
ATOM 302 O OP1 . DG B 1 6 ? -9.780 6.300 33.602 1.00 32.75 ? 16 DG B OP1 1
ATOM 303 O OP2 . DG B 1 6 ? -10.887 3.940 33.876 1.00 31.22 ? 16 DG B OP2 1
ATOM 304 O "O5'" . DG B 1 6 ? -10.221 4.823 31.610 1.00 31.45 ? 16 DG B "O5'" 1
ATOM 305 C "C5'" . DG B 1 6 ? -10.873 5.846 30.872 1.00 29.06 ? 16 DG B "C5'" 1
ATOM 306 C "C4'" . DG B 1 6 ? -12.016 5.216 30.091 1.00 27.94 ? 16 DG B "C4'" 1
ATOM 307 O "O4'" . DG B 1 6 ? -11.612 3.995 29.401 1.00 25.91 ? 16 DG B "O4'" 1
ATOM 308 C "C3'" . DG B 1 6 ? -13.210 4.801 30.950 1.00 27.48 ? 16 DG B "C3'" 1
ATOM 309 O "O3'" . DG B 1 6 ? -14.385 4.952 30.208 1.00 29.51 ? 16 DG B "O3'" 1
ATOM 310 C "C2'" . DG B 1 6 ? -12.977 3.318 31.128 1.00 25.35 ? 16 DG B "C2'" 1
ATOM 311 C "C1'" . DG B 1 6 ? -12.597 3.026 29.687 1.00 22.22 ? 16 DG B "C1'" 1
ATOM 312 N N9 . DG B 1 6 ? -12.036 1.707 29.543 1.00 21.00 ? 16 DG B N9 1
ATOM 313 C C8 . DG B 1 6 ? -11.713 0.891 30.585 1.00 19.98 ? 16 DG B C8 1
ATOM 314 N N7 . DG B 1 6 ? -11.224 -0.242 30.195 1.00 21.04 ? 16 DG B N7 1
ATOM 315 C C5 . DG B 1 6 ? -11.232 -0.169 28.805 1.00 19.67 ? 16 DG B C5 1
ATOM 316 C C6 . DG B 1 6 ? -10.814 -1.124 27.859 1.00 19.11 ? 16 DG B C6 1
ATOM 317 O O6 . DG B 1 6 ? -10.331 -2.255 28.069 1.00 19.74 ? 16 DG B O6 1
ATOM 318 N N1 . DG B 1 6 ? -11.002 -0.663 26.565 1.00 19.22 ? 16 DG B N1 1
ATOM 319 C C2 . DG B 1 6 ? -11.515 0.559 26.232 1.00 19.02 ? 16 DG B C2 1
ATOM 320 N N2 . DG B 1 6 ? -11.599 0.805 24.927 1.00 20.11 ? 16 DG B N2 1
ATOM 321 N N3 . DG B 1 6 ? -11.909 1.471 27.104 1.00 20.07 ? 16 DG B N3 1
ATOM 322 C C4 . DG B 1 6 ? -11.737 1.032 28.380 1.00 20.29 ? 16 DG B C4 1
ATOM 323 P P . DC B 1 7 ? -15.148 6.353 30.154 1.00 31.67 ? 17 DC B P 1
ATOM 324 O OP1 . DC B 1 7 ? -14.296 7.392 30.779 1.00 30.53 ? 17 DC B OP1 1
ATOM 325 O OP2 . DC B 1 7 ? -16.496 6.025 30.694 1.00 30.78 ? 17 DC B OP2 1
ATOM 326 O "O5'" . DC B 1 7 ? -15.297 6.687 28.582 1.00 29.50 ? 17 DC B "O5'" 1
ATOM 327 C "C5'" . DC B 1 7 ? -14.403 6.159 27.586 1.00 28.27 ? 17 DC B "C5'" 1
ATOM 328 C "C4'" . DC B 1 7 ? -15.046 5.246 26.531 1.00 25.80 ? 17 DC B "C4'" 1
ATOM 329 O "O4'" . DC B 1 7 ? -14.747 3.827 26.699 1.00 24.08 ? 17 DC B "O4'" 1
ATOM 330 C "C3'" . DC B 1 7 ? -16.553 5.289 26.389 1.00 26.16 ? 17 DC B "C3'" 1
ATOM 331 O "O3'" . DC B 1 7 ? -16.751 5.316 24.999 1.00 27.05 ? 17 DC B "O3'" 1
ATOM 332 C "C2'" . DC B 1 7 ? -17.021 3.968 27.006 1.00 24.22 ? 17 DC B "C2'" 1
ATOM 333 C "C1'" . DC B 1 7 ? -15.908 3.017 26.583 1.00 21.81 ? 17 DC B "C1'" 1
ATOM 334 N N1 . DC B 1 7 ? -15.606 1.842 27.462 1.00 19.50 ? 17 DC B N1 1
ATOM 335 C C2 . DC B 1 7 ? -15.059 0.649 26.952 1.00 17.53 ? 17 DC B C2 1
ATOM 336 O O2 . DC B 1 7 ? -14.853 0.498 25.747 1.00 15.06 ? 17 DC B O2 1
ATOM 337 N N3 . DC B 1 7 ? -14.769 -0.347 27.820 1.00 17.42 ? 17 DC B N3 1
ATOM 338 C C4 . DC B 1 7 ? -14.986 -0.185 29.127 1.00 17.62 ? 17 DC B C4 1
ATOM 339 N N4 . DC B 1 7 ? -14.686 -1.180 29.955 1.00 19.04 ? 17 DC B N4 1
ATOM 340 C C5 . DC B 1 7 ? -15.521 1.011 29.662 1.00 18.08 ? 17 DC B C5 1
ATOM 341 C C6 . DC B 1 7 ? -15.808 1.986 28.803 1.00 19.00 ? 17 DC B C6 1
ATOM 342 P P . DC B 1 8 ? -18.010 6.044 24.370 1.00 27.64 ? 18 DC B P 1
ATOM 343 O OP1 . DC B 1 8 ? -17.473 6.863 23.257 1.00 28.54 ? 18 DC B OP1 1
ATOM 344 O OP2 . DC B 1 8 ? -18.835 6.629 25.458 1.00 26.12 ? 18 DC B OP2 1
ATOM 345 O "O5'" . DC B 1 8 ? -18.795 4.813 23.721 1.00 26.92 ? 18 DC B "O5'" 1
ATOM 346 C "C5'" . DC B 1 8 ? -18.058 3.724 23.168 1.00 24.78 ? 18 DC B "C5'" 1
ATOM 347 C "C4'" . DC B 1 8 ? -18.989 2.655 22.622 1.00 23.90 ? 18 DC B "C4'" 1
ATOM 348 O "O4'" . DC B 1 8 ? -18.790 1.408 23.346 1.00 23.02 ? 18 DC B "O4'" 1
ATOM 349 C "C3'" . DC B 1 8 ? -20.488 2.932 22.726 1.00 24.41 ? 18 DC B "C3'" 1
ATOM 350 O "O3'" . DC B 1 8 ? -21.178 2.196 21.708 1.00 27.62 ? 18 DC B "O3'" 1
ATOM 351 C "C2'" . DC B 1 8 ? -20.827 2.394 24.114 1.00 22.44 ? 18 DC B "C2'" 1
ATOM 352 C "C1'" . DC B 1 8 ? -19.918 1.161 24.191 1.00 20.75 ? 18 DC B "C1'" 1
ATOM 353 N N1 . DC B 1 8 ? -19.502 0.749 25.598 1.00 17.32 ? 18 DC B N1 1
ATOM 354 C C2 . DC B 1 8 ? -18.908 -0.507 25.836 1.00 15.09 ? 18 DC B C2 1
ATOM 355 O O2 . DC B 1 8 ? -18.695 -1.303 24.905 1.00 12.33 ? 18 DC B O2 1
ATOM 356 N N3 . DC B 1 8 ? -18.563 -0.823 27.104 1.00 14.95 ? 18 DC B N3 1
ATOM 357 C C4 . DC B 1 8 ? -18.784 0.035 28.103 1.00 16.63 ? 18 DC B C4 1
ATOM 358 N N4 . DC B 1 8 ? -18.429 -0.328 29.340 1.00 17.31 ? 18 DC B N4 1
ATOM 359 C C5 . DC B 1 8 ? -19.396 1.306 27.886 1.00 17.00 ? 18 DC B C5 1
ATOM 360 C C6 . DC B 1 8 ? -19.734 1.612 26.630 1.00 16.90 ? 18 DC B C6 1
ATOM 361 P P . DG B 1 9 ? -21.739 2.878 20.359 1.00 29.41 ? 19 DG B P 1
ATOM 362 O OP1 . DG B 1 9 ? -20.694 3.714 19.706 1.00 28.82 ? 19 DG B OP1 1
ATOM 363 O OP2 . DG B 1 9 ? -23.048 3.478 20.732 1.00 27.35 ? 19 DG B OP2 1
ATOM 364 O "O5'" . DG B 1 9 ? -21.917 1.588 19.435 1.00 26.87 ? 19 DG B "O5'" 1
ATOM 365 C "C5'" . DG B 1 9 ? -20.828 0.703 19.295 1.00 26.10 ? 19 DG B "C5'" 1
ATOM 366 C "C4'" . DG B 1 9 ? -21.319 -0.744 19.310 1.00 27.28 ? 19 DG B "C4'" 1
ATOM 367 O "O4'" . DG B 1 9 ? -21.367 -1.334 20.653 1.00 27.17 ? 19 DG B "O4'" 1
ATOM 368 C "C3'" . DG B 1 9 ? -22.709 -1.019 18.756 1.00 26.45 ? 19 DG B "C3'" 1
ATOM 369 O "O3'" . DG B 1 9 ? -22.626 -2.345 18.293 1.00 27.80 ? 19 DG B "O3'" 1
ATOM 370 C "C2'" . DG B 1 9 ? -23.581 -0.914 20.010 1.00 25.47 ? 19 DG B "C2'" 1
ATOM 371 C "C1'" . DG B 1 9 ? -22.701 -1.643 21.032 1.00 23.91 ? 19 DG B "C1'" 1
ATOM 372 N N9 . DG B 1 9 ? -22.821 -1.225 22.429 1.00 23.36 ? 19 DG B N9 1
ATOM 373 C C8 . DG B 1 9 ? -23.444 -0.089 22.888 1.00 22.62 ? 19 DG B C8 1
ATOM 374 N N7 . DG B 1 9 ? -23.384 0.056 24.183 1.00 22.40 ? 19 DG B N7 1
ATOM 375 C C5 . DG B 1 9 ? -22.668 -1.052 24.604 1.00 21.73 ? 19 DG B C5 1
ATOM 376 C C6 . DG B 1 9 ? -22.299 -1.395 25.910 1.00 21.58 ? 19 DG B C6 1
ATOM 377 O O6 . DG B 1 9 ? -22.568 -0.745 26.934 1.00 23.67 ? 19 DG B O6 1
ATOM 378 N N1 . DG B 1 9 ? -21.586 -2.586 25.949 1.00 20.53 ? 19 DG B N1 1
ATOM 379 C C2 . DG B 1 9 ? -21.268 -3.339 24.847 1.00 20.34 ? 19 DG B C2 1
ATOM 380 N N2 . DG B 1 9 ? -20.568 -4.456 25.085 1.00 21.30 ? 19 DG B N2 1
ATOM 381 N N3 . DG B 1 9 ? -21.603 -3.021 23.601 1.00 20.71 ? 19 DG B N3 1
ATOM 382 C C4 . DG B 1 9 ? -22.309 -1.861 23.552 1.00 21.88 ? 19 DG B C4 1
ATOM 383 P P . DG B 1 10 ? -23.388 -2.866 16.988 1.00 28.21 ? 20 DG B P 1
ATOM 384 O OP1 . DG B 1 10 ? -22.525 -2.526 15.822 1.00 28.23 ? 20 DG B OP1 1
ATOM 385 O OP2 . DG B 1 10 ? -24.792 -2.357 17.030 1.00 26.48 ? 20 DG B OP2 1
ATOM 386 O "O5'" . DG B 1 10 ? -23.326 -4.456 17.261 1.00 24.20 ? 20 DG B "O5'" 1
ATOM 387 C "C5'" . DG B 1 10 ? -22.057 -5.099 17.468 1.00 22.09 ? 20 DG B "C5'" 1
ATOM 388 C "C4'" . DG B 1 10 ? -22.110 -6.311 18.416 1.00 20.91 ? 20 DG B "C4'" 1
ATOM 389 O "O4'" . DG B 1 10 ? -22.478 -5.933 19.766 1.00 19.38 ? 20 DG B "O4'" 1
ATOM 390 C "C3'" . DG B 1 10 ? -23.133 -7.395 18.118 1.00 20.54 ? 20 DG B "C3'" 1
ATOM 391 O "O3'" . DG B 1 10 ? -22.719 -8.615 18.760 1.00 22.14 ? 20 DG B "O3'" 1
ATOM 392 C "C2'" . DG B 1 10 ? -24.379 -6.800 18.764 1.00 18.78 ? 20 DG B "C2'" 1
ATOM 393 C "C1'" . DG B 1 10 ? -23.769 -6.422 20.106 1.00 16.97 ? 20 DG B "C1'" 1
ATOM 394 N N9 . DG B 1 10 ? -24.417 -5.365 20.886 1.00 15.11 ? 20 DG B N9 1
ATOM 395 C C8 . DG B 1 10 ? -25.106 -4.304 20.391 1.00 14.64 ? 20 DG B C8 1
ATOM 396 N N7 . DG B 1 10 ? -25.547 -3.495 21.312 1.00 15.15 ? 20 DG B N7 1
ATOM 397 C C5 . DG B 1 10 ? -25.123 -4.051 22.503 1.00 14.42 ? 20 DG B C5 1
ATOM 398 C C6 . DG B 1 10 ? -25.313 -3.594 23.830 1.00 16.07 ? 20 DG B C6 1
ATOM 399 O O6 . DG B 1 10 ? -25.919 -2.576 24.220 1.00 17.94 ? 20 DG B O6 1
ATOM 400 N N1 . DG B 1 10 ? -24.726 -4.440 24.763 1.00 15.72 ? 20 DG B N1 1
ATOM 401 C C2 . DG B 1 10 ? -24.037 -5.587 24.445 1.00 15.74 ? 20 DG B C2 1
ATOM 402 N N2 . DG B 1 10 ? -23.546 -6.275 25.487 1.00 15.39 ? 20 DG B N2 1
ATOM 403 N N3 . DG B 1 10 ? -23.851 -6.020 23.198 1.00 15.04 ? 20 DG B N3 1
ATOM 404 C C4 . DG B 1 10 ? -24.423 -5.204 22.266 1.00 14.67 ? 20 DG B C4 1
HETATM 405 BA BA . BA C 2 . ? -13.287 -4.580 31.200 0.50 37.67 ? 22 BA A BA 1
HETATM 406 BA BA . BA D 2 . ? -9.974 -4.613 11.320 0.50 44.72 ? 29 BA A BA 1
HETATM 407 BA BA . BA E 2 . ? -17.121 2.569 4.316 0.50 46.70 ? 32 BA A BA 1
HETATM 408 BA BA . BA F 2 . ? -18.484 -6.374 21.228 0.40 41.62 ? 23 BA B BA 1
HETATM 409 O O . HOH G 3 . ? -5.246 -4.777 24.239 1.00 10.09 ? 21 HOH A O 1
HETATM 410 O O . HOH G 3 . ? -16.418 -6.542 23.443 1.00 22.64 ? 26 HOH A O 1
HETATM 411 O O . HOH G 3 . ? -7.185 -1.626 17.434 0.50 2.00 ? 28 HOH A O 1
HETATM 412 O O . HOH G 3 . ? -14.656 11.240 11.002 1.00 2.67 ? 30 HOH A O 1
HETATM 413 O O . HOH G 3 . ? -17.231 14.731 9.776 1.00 8.73 ? 31 HOH A O 1
HETATM 414 O O . HOH G 3 . ? -13.511 4.663 3.407 1.00 19.45 ? 33 HOH A O 1
HETATM 415 O O . HOH G 3 . ? -22.732 -7.868 28.058 1.00 16.16 ? 36 HOH A O 1
HETATM 416 O O . HOH G 3 . ? -14.809 2.053 4.133 1.00 35.14 ? 40 HOH A O 1
HETATM 417 O O . HOH G 3 . ? -16.997 -2.159 32.736 1.00 9.39 ? 44 HOH A O 1
HETATM 418 O O . HOH G 3 . ? -0.347 7.395 13.181 1.00 29.61 ? 46 HOH A O 1
HETATM 419 O O . HOH G 3 . ? -9.549 11.402 17.888 1.00 15.91 ? 47 HOH A O 1
HETATM 420 O O . HOH G 3 . ? -5.409 12.090 16.603 1.00 30.95 ? 48 HOH A O 1
HETATM 421 O O . HOH G 3 . ? -16.488 10.848 11.445 1.00 19.30 ? 51 HOH A O 1
HETATM 422 O O . HOH G 3 . ? -11.227 -5.040 30.085 1.00 34.33 ? 53 HOH A O 1
HETATM 423 O O . HOH H 3 . ? -18.477 -1.271 22.297 1.00 19.30 ? 25 HOH B O 1
HETATM 424 O O . HOH H 3 . ? -11.677 -3.131 32.369 1.00 18.80 ? 27 HOH B O 1
HETATM 425 O O . HOH H 3 . ? -16.558 -2.183 20.604 1.00 20.17 ? 34 HOH B O 1
HETATM 426 O O . HOH H 3 . ? -22.314 -8.136 23.050 1.00 17.55 ? 37 HOH B O 1
HETATM 427 O O . HOH H 3 . ? -20.515 -5.475 22.404 1.00 23.64 ? 39 HOH B O 1
HETATM 428 O O . HOH H 3 . ? -0.076 -6.443 25.531 1.00 26.24 ? 42 HOH B O 1
HETATM 429 O O . HOH H 3 . ? -11.086 -1.004 32.698 1.00 19.49 ? 43 HOH B O 1
HETATM 430 O O . HOH H 3 . ? -11.375 6.735 23.781 1.00 28.10 ? 49 HOH B O 1
HETATM 431 O O . HOH H 3 . ? -19.125 5.758 20.028 1.00 21.29 ? 50 HOH B O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DC 2 2 2 DC C A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DG 6 6 6 DG G A . n
A 1 7 DC 7 7 7 DC C A . n
A 1 8 DC 8 8 8 DC C A . n
A 1 9 DG 9 9 9 DG G A . n
A 1 10 DG 10 10 10 DG G A . n
B 1 1 DC 1 11 11 DC C B . n
B 1 2 DC 2 12 12 DC C B . n
B 1 3 DG 3 13 13 DG G B . n
B 1 4 DG 4 14 14 DG G B . n
B 1 5 DC 5 15 15 DC C B . n
B 1 6 DG 6 16 16 DG G B . n
B 1 7 DC 7 17 17 DC C B . n
B 1 8 DC 8 18 18 DC C B . n
B 1 9 DG 9 19 19 DG G B . n
B 1 10 DG 10 20 20 DG G B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 BA 1 22 22 BA BA A .
D 2 BA 1 29 29 BA BA A .
E 2 BA 1 32 32 BA BA A .
F 2 BA 1 23 23 BA BA B .
G 3 HOH 1 21 21 HOH HOH A .
G 3 HOH 2 26 26 HOH HOH A .
G 3 HOH 3 28 28 HOH HOH A .
G 3 HOH 4 30 30 HOH HOH A .
G 3 HOH 5 31 31 HOH HOH A .
G 3 HOH 6 33 33 HOH HOH A .
G 3 HOH 7 36 36 HOH HOH A .
G 3 HOH 8 40 40 HOH HOH A .
G 3 HOH 9 44 44 HOH HOH A .
G 3 HOH 10 46 46 HOH HOH A .
G 3 HOH 11 47 47 HOH HOH A .
G 3 HOH 12 48 48 HOH HOH A .
G 3 HOH 13 51 51 HOH HOH A .
G 3 HOH 14 53 53 HOH HOH A .
H 3 HOH 1 25 25 HOH HOH B .
H 3 HOH 2 27 27 HOH HOH B .
H 3 HOH 3 34 34 HOH HOH B .
H 3 HOH 4 37 37 HOH HOH B .
H 3 HOH 5 39 39 HOH HOH B .
H 3 HOH 6 42 42 HOH HOH B .
H 3 HOH 7 43 43 HOH HOH B .
H 3 HOH 8 49 49 HOH HOH B .
H 3 HOH 9 50 50 HOH HOH B .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details tetrameric
_pdbx_struct_assembly.oligomeric_count 4
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 5020 ?
1 MORE -72 ?
1 'SSA (A^2)' 6290 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 -12.8547407409 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 34.9946939047
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2009-04-07
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2017-11-01
4 'Structure model' 1 3 2018-04-04
5 'Structure model' 1 4 2023-09-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Refinement description'
3 4 'Structure model' 'Data collection'
4 5 'Structure model' 'Data collection'
5 5 'Structure model' 'Database references'
6 5 'Structure model' 'Derived calculations'
7 5 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' software
2 4 'Structure model' diffrn_source
3 5 'Structure model' chem_comp_atom
4 5 'Structure model' chem_comp_bond
5 5 'Structure model' database_2
6 5 'Structure model' pdbx_initial_refinement_model
7 5 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_diffrn_source.type'
2 5 'Structure model' '_database_2.pdbx_DOI'
3 5 'Structure model' '_database_2.pdbx_database_accession'
4 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
5 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
6 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
loop_
_symmetry_equiv.id
_symmetry_equiv.pos_as_xyz
1 'X, Y, Z'
2 '-X, Y, -Z'
3 'X+1/2, Y+1/2, Z'
4 '-X+1/2, Y+1/2, -Z'
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement
http://www.ccp4.ac.uk/main.html Fortran ? 1
PDB_EXTRACT 1.401 'March 3, 2004' program H.Yang sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C/C++ ? 2
CrysalisPro Red ? ? ? ? 'data collection' ? ? ? 3
CrysalisPro Red ? ? ? ? 'data reduction' ? ? ? 4
CrysalisPro Red ? ? ? ? 'data scaling' ? ? ? 5
MOLREP . ? ? ? ? phasing ? ? ? 6
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 O
_pdbx_validate_close_contact.auth_asym_id_1 A
_pdbx_validate_close_contact.auth_comp_id_1 HOH
_pdbx_validate_close_contact.auth_seq_id_1 30
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 O
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 HOH
_pdbx_validate_close_contact.auth_seq_id_2 51
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 1.93
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.24 108.30 1.94 0.30 N
2 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 102.13 108.00 -5.87 0.70 N
3 1 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? "C1'" A DG 4 ? ? 94.63 102.40 -7.77 0.80 N
4 1 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 96.63 102.40 -5.77 0.80 N
5 1 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 103.57 108.00 -4.43 0.70 N
6 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 112.13 108.30 3.83 0.30 N
7 1 "O4'" B DG 20 ? ? "C4'" B DG 20 ? ? "C3'" B DG 20 ? ? 101.40 104.50 -3.10 0.40 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
BA BA BA N N 1
DC OP3 O N N 2
DC P P N N 3
DC OP1 O N N 4
DC OP2 O N N 5
DC "O5'" O N N 6
DC "C5'" C N N 7
DC "C4'" C N R 8
DC "O4'" O N N 9
DC "C3'" C N S 10
DC "O3'" O N N 11
DC "C2'" C N N 12
DC "C1'" C N R 13
DC N1 N N N 14
DC C2 C N N 15
DC O2 O N N 16
DC N3 N N N 17
DC C4 C N N 18
DC N4 N N N 19
DC C5 C N N 20
DC C6 C N N 21
DC HOP3 H N N 22
DC HOP2 H N N 23
DC "H5'" H N N 24
DC "H5''" H N N 25
DC "H4'" H N N 26
DC "H3'" H N N 27
DC "HO3'" H N N 28
DC "H2'" H N N 29
DC "H2''" H N N 30
DC "H1'" H N N 31
DC H41 H N N 32
DC H42 H N N 33
DC H5 H N N 34
DC H6 H N N 35
DG OP3 O N N 36
DG P P N N 37
DG OP1 O N N 38
DG OP2 O N N 39
DG "O5'" O N N 40
DG "C5'" C N N 41
DG "C4'" C N R 42
DG "O4'" O N N 43
DG "C3'" C N S 44
DG "O3'" O N N 45
DG "C2'" C N N 46
DG "C1'" C N R 47
DG N9 N Y N 48
DG C8 C Y N 49
DG N7 N Y N 50
DG C5 C Y N 51
DG C6 C N N 52
DG O6 O N N 53
DG N1 N N N 54
DG C2 C N N 55
DG N2 N N N 56
DG N3 N N N 57
DG C4 C Y N 58
DG HOP3 H N N 59
DG HOP2 H N N 60
DG "H5'" H N N 61
DG "H5''" H N N 62
DG "H4'" H N N 63
DG "H3'" H N N 64
DG "HO3'" H N N 65
DG "H2'" H N N 66
DG "H2''" H N N 67
DG "H1'" H N N 68
DG H8 H N N 69
DG H1 H N N 70
DG H21 H N N 71
DG H22 H N N 72
HOH O O N N 73
HOH H1 H N N 74
HOH H2 H N N 75
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DC OP3 P sing N N 1
DC OP3 HOP3 sing N N 2
DC P OP1 doub N N 3
DC P OP2 sing N N 4
DC P "O5'" sing N N 5
DC OP2 HOP2 sing N N 6
DC "O5'" "C5'" sing N N 7
DC "C5'" "C4'" sing N N 8
DC "C5'" "H5'" sing N N 9
DC "C5'" "H5''" sing N N 10
DC "C4'" "O4'" sing N N 11
DC "C4'" "C3'" sing N N 12
DC "C4'" "H4'" sing N N 13
DC "O4'" "C1'" sing N N 14
DC "C3'" "O3'" sing N N 15
DC "C3'" "C2'" sing N N 16
DC "C3'" "H3'" sing N N 17
DC "O3'" "HO3'" sing N N 18
DC "C2'" "C1'" sing N N 19
DC "C2'" "H2'" sing N N 20
DC "C2'" "H2''" sing N N 21
DC "C1'" N1 sing N N 22
DC "C1'" "H1'" sing N N 23
DC N1 C2 sing N N 24
DC N1 C6 sing N N 25
DC C2 O2 doub N N 26
DC C2 N3 sing N N 27
DC N3 C4 doub N N 28
DC C4 N4 sing N N 29
DC C4 C5 sing N N 30
DC N4 H41 sing N N 31
DC N4 H42 sing N N 32
DC C5 C6 doub N N 33
DC C5 H5 sing N N 34
DC C6 H6 sing N N 35
DG OP3 P sing N N 36
DG OP3 HOP3 sing N N 37
DG P OP1 doub N N 38
DG P OP2 sing N N 39
DG P "O5'" sing N N 40
DG OP2 HOP2 sing N N 41
DG "O5'" "C5'" sing N N 42
DG "C5'" "C4'" sing N N 43
DG "C5'" "H5'" sing N N 44
DG "C5'" "H5''" sing N N 45
DG "C4'" "O4'" sing N N 46
DG "C4'" "C3'" sing N N 47
DG "C4'" "H4'" sing N N 48
DG "O4'" "C1'" sing N N 49
DG "C3'" "O3'" sing N N 50
DG "C3'" "C2'" sing N N 51
DG "C3'" "H3'" sing N N 52
DG "O3'" "HO3'" sing N N 53
DG "C2'" "C1'" sing N N 54
DG "C2'" "H2'" sing N N 55
DG "C2'" "H2''" sing N N 56
DG "C1'" N9 sing N N 57
DG "C1'" "H1'" sing N N 58
DG N9 C8 sing Y N 59
DG N9 C4 sing Y N 60
DG C8 N7 doub Y N 61
DG C8 H8 sing N N 62
DG N7 C5 sing Y N 63
DG C5 C6 sing N N 64
DG C5 C4 doub Y N 65
DG C6 O6 doub N N 66
DG C6 N1 sing N N 67
DG N1 C2 sing N N 68
DG N1 H1 sing N N 69
DG C2 N2 sing N N 70
DG C2 N3 doub N N 71
DG N2 H21 sing N N 72
DG N2 H22 sing N N 73
DG N3 C4 sing N N 74
HOH O H1 sing N N 75
HOH O H2 sing N N 76
#
_ndb_struct_conf_na.entry_id 3GOJ
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 10 1_555 0.026 -0.452 0.422 -2.096 -12.741 -3.823 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1
1 A DC 2 1_555 B DG 9 1_555 -0.263 -0.374 0.067 1.833 -7.850 -4.979 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1
1 A DG 3 1_555 B DC 8 1_555 -0.593 -0.326 0.289 -0.378 -0.128 3.534 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1
1 A DG 4 1_555 B DC 7 1_555 -0.424 -0.423 0.068 0.948 -12.105 0.839 4 A_DG4:DC17_B A 4 ? B 17 ? 19 1
1 A DC 5 1_555 B DG 6 1_555 -0.271 -0.197 0.009 -1.781 -10.121 -3.310 5 A_DC5:DG16_B A 5 ? B 16 ? 19 1
1 A DG 6 1_555 B DC 5 1_555 0.688 -0.140 0.430 3.725 -7.860 -7.802 6 A_DG6:DC15_B A 6 ? B 15 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.100 1.877 3.395 7.662 0.832 40.015 2.601 0.744 3.393 1.202 -11.072
40.720 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ?
1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 0.203 2.608 3.383 -3.563 -2.040 41.727 3.861 -0.659 3.230 -2.856 4.988
41.920 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ?
1 A DG 3 1_555 B DC 8 1_555 A DG 4 1_555 B DC 7 1_555 -0.128 1.174 3.378 -0.553 8.607 29.809 0.398 0.124 3.572 16.306 1.048
31.005 3 AA_DG3DG4:DC17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ?
1 A DG 4 1_555 B DC 7 1_555 A DC 5 1_555 B DG 6 1_555 -0.543 1.028 3.351 0.611 -4.413 42.076 1.880 0.815 3.225 -6.126 -0.848
42.301 4 AA_DG4DC5:DG16DC17_BB A 4 ? B 17 ? A 5 ? B 16 ?
1 A DC 5 1_555 B DG 6 1_555 A DG 6 1_555 B DC 5 1_555 0.079 0.618 3.297 -3.367 6.644 36.443 0.062 -0.584 3.334 10.489 5.315
37.171 5 AA_DC5DG6:DC15DG16_BB A 5 ? B 16 ? A 6 ? B 15 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'BARIUM ION' BA
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1P4Y
_pdbx_initial_refinement_model.details 'PDB entry 1P4Y'
#