data_3CCO
#
_entry.id 3CCO
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.380
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3CCO pdb_00003cco 10.2210/pdb3cco/pdb
NDB DD0091 ? ?
RCSB RCSB046616 ? ?
WWPDB D_1000046616 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 3CDM
_pdbx_database_related.details 'Human Telomeric Sequence bound to same ligand'
_pdbx_database_related.content_type unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3CCO
_pdbx_database_status.recvd_initial_deposition_date 2008-02-26
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Parkinson, G.N.' 1
'Neidle, S.' 2
#
_citation.id primary
_citation.title
;Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes
;
_citation.journal_abbrev J.Mol.Biol.
_citation.journal_volume 381
_citation.page_first 1145
_citation.page_last 1156
_citation.year 2008
_citation.journal_id_ASTM JMOBAK
_citation.country UK
_citation.journal_id_ISSN 0022-2836
_citation.journal_id_CSD 0070
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 18619463
_citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.06.022
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Parkinson, G.N.' 1 ?
primary 'Cuenca, F.' 2 ?
primary 'Neidle, S.' 3 ?
#
_cell.entry_id 3CCO
_cell.length_a 61.350
_cell.length_b 61.350
_cell.length_c 43.630
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3CCO
_symmetry.space_group_name_H-M 'P 64 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 181
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3')
;
3773.462 1 ? ? ? ?
2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ?
3 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ?
4 non-polymer syn
'2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone' 582.691 3
? ? ? ?
5 water nat water 18.015 28 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'TELOMERE REPEAT SEQUENCE'
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)'
_entity_poly.pdbx_seq_one_letter_code_can TAGGGTTAGGGT
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DA n
1 3 DG n
1 4 DG n
1 5 DG n
1 6 DT n
1 7 DT n
1 8 DA n
1 9 DG n
1 10 DG n
1 11 DG n
1 12 DT n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'THIS SEQUENCE OCCURS NATURALLY IN HUMANS'
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3CCO
_struct_ref.pdbx_db_accession 3CCO
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code TAGGGTTAGGGT
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3CCO
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 12
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 3CCO
_struct_ref_seq.db_align_beg 1001
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 1012
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1001
_struct_ref_seq.pdbx_auth_seq_align_end 1012
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098
NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990
NII non-polymer .
'2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone' ?
'C30 H42 N6 O6' 582.691
#
_exptl.entry_id 3CCO
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 2
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.14
_exptl_crystal.density_percent_sol 60.84
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 283
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pdbx_details
'300mM sodium chloride, 50mM sodium cacodylate pH 6.5, 30% v/v MPD, VAPOR DIFFUSION, HANGING DROP, temperature 283K'
_exptl_crystal_grow.pdbx_pH_range .
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 'sodium chloride' ? ? ?
1 2 1 'sodium cacodylate' ? ? ?
1 3 1 MPD ? ? ?
1 4 1 HOH ? ? ?
1 5 2 'sodium chloride' ? ? ?
1 6 2 'sodium cacodylate' ? ? ?
1 7 2 MPD ? ? ?
1 8 2 HOH ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 210'
_diffrn_detector.pdbx_collection_date 2007-10-07
_diffrn_detector.details MONOCHROMATOR
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si 111 CHANNEL'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9785
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE ID14-1'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline ID14-1
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.9785
#
_reflns.entry_id 3CCO
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I 0.0
_reflns.d_resolution_high 1.97
_reflns.d_resolution_low 22.69
_reflns.number_all 3739
_reflns.number_obs 3697
_reflns.percent_possible_obs 98.9
_reflns.pdbx_Rmerge_I_obs 0.056
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 23.3
_reflns.B_iso_Wilson_estimate 33
_reflns.pdbx_redundancy 10
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.97
_reflns_shell.d_res_low 2.04
_reflns_shell.percent_possible_all 100.0
_reflns_shell.Rmerge_I_obs 0.134
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 10.8
_reflns_shell.pdbx_redundancy 10.8
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 359
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3CCO
_refine.ls_number_reflns_obs 2520
_refine.ls_number_reflns_all 2520
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 10.00
_refine.ls_d_res_high 2.20
_refine.ls_percent_reflns_obs 98.80
_refine.ls_R_factor_obs 0.25664
_refine.ls_R_factor_all 0.25664
_refine.ls_R_factor_R_work 0.25436
_refine.ls_R_factor_R_free 0.30275
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.7
_refine.ls_number_reflns_R_free 123
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.917
_refine.correlation_coeff_Fo_to_Fc_free 0.894
_refine.B_iso_mean 21.260
_refine.aniso_B[1][1] 1.39
_refine.aniso_B[2][2] 1.39
_refine.aniso_B[3][3] -2.09
_refine.aniso_B[1][2] 0.70
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model 'PDB ENTRY 1KF1'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model Overall
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.348
_refine.pdbx_overall_ESU_R_Free 0.263
_refine.overall_SU_ML 0.167
_refine.overall_SU_B 6.344
_refine.ls_redundancy_reflns_obs ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 219
_refine_hist.pdbx_number_atoms_ligand 130
_refine_hist.number_atoms_solvent 28
_refine_hist.number_atoms_total 377
_refine_hist.d_res_high 2.20
_refine_hist.d_res_low 10.00
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.019 0.021 ? 381 'X-RAY DIFFRACTION' ?
r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 3.306 3.000 ? 574 'X-RAY DIFFRACTION' ?
r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.138 0.200 ? 47 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.019 0.020 ? 190 'X-RAY DIFFRACTION' ?
r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.394 0.200 ? 108 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.353 0.200 ? 228 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.318 0.200 ? 15 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined 0.232 0.200 ? 3 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.397 0.200 ? 66 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.179 0.200 ? 8 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined 0.101 0.200 ? 3 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
r_scbond_it 1.920 3.000 ? 689 'X-RAY DIFFRACTION' ?
r_scangle_it 3.389 4.500 ? 574 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.200
_refine_ls_shell.d_res_low 2.255
_refine_ls_shell.number_reflns_R_work 178
_refine_ls_shell.R_factor_R_work 0.324
_refine_ls_shell.percent_reflns_obs 100.00
_refine_ls_shell.R_factor_R_free 0.567
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 5
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs 178
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3CCO
_struct.title 'Structural adaptation and conservation in quadruplex-drug recognition'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3CCO
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text
'QUADRUPLEX, DNA, PROPELLER, DIMERIC, HUMAN TELOMERE PARALLEL STRANDED, LIGAND, COMPLEX, naphthalene diimidine'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 3 ?
E N N 3 ?
F N N 4 ?
G N N 4 ?
H N N 4 ?
I N N 5 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? B NA . NA ? ? ? 1_555 A DG 11 "O4'" ? ? A NA 4 A DG 1011 1_555 ? ? ? ? ? ? ? 2.816 ? ?
metalc2 metalc ? ? C K . K ? ? ? 1_555 A DG 4 O6 ? ? A K 30 A DG 1004 1_555 ? ? ? ? ? ? ? 2.937 ? ?
metalc3 metalc ? ? C K . K ? ? ? 1_555 A DG 5 O6 ? ? A K 30 A DG 1005 1_555 ? ? ? ? ? ? ? 2.769 ? ?
metalc4 metalc ? ? C K . K ? ? ? 1_555 A DG 11 O6 ? ? A K 30 A DG 1011 1_555 ? ? ? ? ? ? ? 2.658 ? ?
metalc5 metalc ? ? D K . K ? ? ? 1_555 A DG 3 O6 ? ? A K 31 A DG 1003 1_555 ? ? ? ? ? ? ? 2.864 ? ?
metalc6 metalc ? ? D K . K ? ? ? 1_555 A DG 9 O6 ? ? A K 31 A DG 1009 1_555 ? ? ? ? ? ? ? 2.963 ? ?
metalc7 metalc ? ? E K . K ? ? ? 1_555 A DG 3 O6 ? ? A K 32 A DG 1003 1_555 ? ? ? ? ? ? ? 2.866 ? ?
metalc8 metalc ? ? E K . K ? ? ? 1_555 A DG 9 O6 ? ? A K 32 A DG 1009 1_555 ? ? ? ? ? ? ? 2.899 ? ?
hydrog1 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DA 8 N7 ? ? A DG 1003 A DA 1008 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ?
hydrog2 hydrog ? ? A DG 3 N3 ? ? ? 1_555 A DA 8 N6 ? ? A DG 1003 A DA 1008 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ?
hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 1003 A DG 1009 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 1003 A DG 1009 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 1004 A DG 1010 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 1004 A DG 1010 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog7 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 1005 A DG 1011 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
hydrog8 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 1005 A DG 1011 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A NA 4 ? 4 'BINDING SITE FOR RESIDUE NA A 4'
AC2 Software A K 30 ? 5 'BINDING SITE FOR RESIDUE K A 30'
AC3 Software A K 31 ? 6 'BINDING SITE FOR RESIDUE K A 31'
AC4 Software A K 32 ? 3 'BINDING SITE FOR RESIDUE K A 32'
AC5 Software A NII 1 ? 3 'BINDING SITE FOR RESIDUE NII A 1'
AC6 Software A NII 2 ? 4 'BINDING SITE FOR RESIDUE NII A 2'
AC7 Software A NII 3 ? 1 'BINDING SITE FOR RESIDUE NII A 3'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 4 DG A 11 ? DG A 1011 . ? 1_555 ?
2 AC1 4 HOH I . ? HOH A 1013 . ? 12_564 ?
3 AC1 4 HOH I . ? HOH A 1015 . ? 12_564 ?
4 AC1 4 HOH I . ? HOH A 1020 . ? 1_555 ?
5 AC2 5 K D . ? K A 31 . ? 1_555 ?
6 AC2 5 DG A 4 ? DG A 1004 . ? 12_564 ?
7 AC2 5 DG A 5 ? DG A 1005 . ? 1_555 ?
8 AC2 5 DG A 10 ? DG A 1010 . ? 1_555 ?
9 AC2 5 DG A 11 ? DG A 1011 . ? 1_555 ?
10 AC3 6 K C . ? K A 30 . ? 1_555 ?
11 AC3 6 K E . ? K A 32 . ? 12_564 ?
12 AC3 6 DG A 3 ? DG A 1003 . ? 12_564 ?
13 AC3 6 DG A 4 ? DG A 1004 . ? 12_564 ?
14 AC3 6 DG A 9 ? DG A 1009 . ? 12_564 ?
15 AC3 6 DG A 10 ? DG A 1010 . ? 1_555 ?
16 AC4 3 K D . ? K A 31 . ? 1_555 ?
17 AC4 3 DG A 3 ? DG A 1003 . ? 12_564 ?
18 AC4 3 DG A 9 ? DG A 1009 . ? 1_555 ?
19 AC5 3 DG A 5 ? DG A 1005 . ? 1_555 ?
20 AC5 3 DT A 6 ? DT A 1006 . ? 11_455 ?
21 AC5 3 DG A 11 ? DG A 1011 . ? 1_555 ?
22 AC6 4 NII H . ? NII A 3 . ? 12_565 ?
23 AC6 4 DT A 7 ? DT A 1007 . ? 1_555 ?
24 AC6 4 DG A 9 ? DG A 1009 . ? 4_565 ?
25 AC6 4 HOH I . ? HOH A 1016 . ? 4_565 ?
26 AC7 1 NII G . ? NII A 2 . ? 12_565 ?
#
_database_PDB_matrix.entry_id 3CCO
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 3CCO
_atom_sites.fract_transf_matrix[1][1] 0.016300
_atom_sites.fract_transf_matrix[1][2] 0.009411
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.018822
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.022920
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
K
N
NA
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O3'" . DT A 1 1 ? -5.374 14.292 -1.809 0.50 26.18 ? 1001 DT A "O3'" 1
ATOM 2 P P . DA A 1 2 ? -6.667 14.102 -0.887 0.70 28.97 ? 1002 DA A P 1
ATOM 3 O OP1 . DA A 1 2 ? -6.328 14.428 0.517 0.70 25.45 ? 1002 DA A OP1 1
ATOM 4 O OP2 . DA A 1 2 ? -7.351 12.894 -1.364 0.70 23.57 ? 1002 DA A OP2 1
ATOM 5 O "O5'" . DA A 1 2 ? -7.661 15.228 -1.343 1.00 28.73 ? 1002 DA A "O5'" 1
ATOM 6 C "C5'" . DA A 1 2 ? -7.535 16.629 -1.087 1.00 26.12 ? 1002 DA A "C5'" 1
ATOM 7 C "C4'" . DA A 1 2 ? -8.709 17.356 -1.732 1.00 22.51 ? 1002 DA A "C4'" 1
ATOM 8 O "O4'" . DA A 1 2 ? -8.448 17.463 -3.141 1.00 24.32 ? 1002 DA A "O4'" 1
ATOM 9 C "C3'" . DA A 1 2 ? -10.061 16.681 -1.743 1.00 21.42 ? 1002 DA A "C3'" 1
ATOM 10 O "O3'" . DA A 1 2 ? -11.152 17.673 -1.795 1.00 20.68 ? 1002 DA A "O3'" 1
ATOM 11 C "C2'" . DA A 1 2 ? -9.902 15.751 -2.957 1.00 23.35 ? 1002 DA A "C2'" 1
ATOM 12 C "C1'" . DA A 1 2 ? -9.328 16.728 -3.949 1.00 23.74 ? 1002 DA A "C1'" 1
ATOM 13 N N9 . DA A 1 2 ? -8.477 16.143 -4.959 1.00 25.18 ? 1002 DA A N9 1
ATOM 14 C C8 . DA A 1 2 ? -7.865 14.926 -4.914 1.00 26.43 ? 1002 DA A C8 1
ATOM 15 N N7 . DA A 1 2 ? -7.109 14.671 -5.953 1.00 28.09 ? 1002 DA A N7 1
ATOM 16 C C5 . DA A 1 2 ? -7.227 15.797 -6.751 1.00 29.09 ? 1002 DA A C5 1
ATOM 17 C C6 . DA A 1 2 ? -6.683 16.176 -8.009 1.00 29.18 ? 1002 DA A C6 1
ATOM 18 N N6 . DA A 1 2 ? -5.860 15.414 -8.717 1.00 26.09 ? 1002 DA A N6 1
ATOM 19 N N1 . DA A 1 2 ? -7.000 17.382 -8.532 1.00 28.65 ? 1002 DA A N1 1
ATOM 20 C C2 . DA A 1 2 ? -7.828 18.155 -7.841 1.00 29.21 ? 1002 DA A C2 1
ATOM 21 N N3 . DA A 1 2 ? -8.392 17.921 -6.649 1.00 30.51 ? 1002 DA A N3 1
ATOM 22 C C4 . DA A 1 2 ? -8.062 16.719 -6.142 1.00 27.95 ? 1002 DA A C4 1
ATOM 23 P P . DG A 1 3 ? -12.699 17.306 -1.668 1.00 18.64 ? 1003 DG A P 1
ATOM 24 O OP1 . DG A 1 3 ? -12.871 16.311 -0.614 1.00 22.62 ? 1003 DG A OP1 1
ATOM 25 O OP2 . DG A 1 3 ? -13.326 17.182 -3.005 1.00 21.06 ? 1003 DG A OP2 1
ATOM 26 O "O5'" . DG A 1 3 ? -13.292 18.619 -1.098 1.00 17.86 ? 1003 DG A "O5'" 1
ATOM 27 C "C5'" . DG A 1 3 ? -13.111 18.864 0.242 1.00 17.38 ? 1003 DG A "C5'" 1
ATOM 28 C "C4'" . DG A 1 3 ? -14.210 19.739 0.778 1.00 14.85 ? 1003 DG A "C4'" 1
ATOM 29 O "O4'" . DG A 1 3 ? -14.176 20.942 0.009 1.00 17.04 ? 1003 DG A "O4'" 1
ATOM 30 C "C3'" . DG A 1 3 ? -15.586 19.150 0.642 1.00 15.93 ? 1003 DG A "C3'" 1
ATOM 31 O "O3'" . DG A 1 3 ? -16.385 19.612 1.767 1.00 18.45 ? 1003 DG A "O3'" 1
ATOM 32 C "C2'" . DG A 1 3 ? -16.035 19.871 -0.654 1.00 14.49 ? 1003 DG A "C2'" 1
ATOM 33 C "C1'" . DG A 1 3 ? -15.401 21.259 -0.579 1.00 12.85 ? 1003 DG A "C1'" 1
ATOM 34 N N9 . DG A 1 3 ? -15.355 21.784 -1.952 1.00 9.71 ? 1003 DG A N9 1
ATOM 35 C C8 . DG A 1 3 ? -14.966 21.093 -3.110 1.00 7.13 ? 1003 DG A C8 1
ATOM 36 N N7 . DG A 1 3 ? -15.105 21.763 -4.211 1.00 9.65 ? 1003 DG A N7 1
ATOM 37 C C5 . DG A 1 3 ? -15.617 22.943 -3.743 1.00 7.06 ? 1003 DG A C5 1
ATOM 38 C C6 . DG A 1 3 ? -15.975 24.075 -4.398 1.00 7.83 ? 1003 DG A C6 1
ATOM 39 O O6 . DG A 1 3 ? -15.920 24.321 -5.565 1.00 14.25 ? 1003 DG A O6 1
ATOM 40 N N1 . DG A 1 3 ? -16.460 25.118 -3.651 1.00 7.32 ? 1003 DG A N1 1
ATOM 41 C C2 . DG A 1 3 ? -16.547 25.083 -2.273 1.00 5.50 ? 1003 DG A C2 1
ATOM 42 N N2 . DG A 1 3 ? -17.024 26.175 -1.654 1.00 7.33 ? 1003 DG A N2 1
ATOM 43 N N3 . DG A 1 3 ? -16.214 24.029 -1.617 1.00 5.92 ? 1003 DG A N3 1
ATOM 44 C C4 . DG A 1 3 ? -15.755 22.998 -2.373 1.00 5.55 ? 1003 DG A C4 1
ATOM 45 P P . DG A 1 4 ? -17.943 19.179 1.916 1.00 17.29 ? 1004 DG A P 1
ATOM 46 O OP1 . DG A 1 4 ? -18.004 18.449 3.168 1.00 21.49 ? 1004 DG A OP1 1
ATOM 47 O OP2 . DG A 1 4 ? -18.444 18.470 0.731 1.00 17.36 ? 1004 DG A OP2 1
ATOM 48 O "O5'" . DG A 1 4 ? -18.647 20.536 2.030 1.00 12.85 ? 1004 DG A "O5'" 1
ATOM 49 C "C5'" . DG A 1 4 ? -18.079 21.581 2.721 1.00 15.48 ? 1004 DG A "C5'" 1
ATOM 50 C "C4'" . DG A 1 4 ? -18.975 22.793 2.682 1.00 13.30 ? 1004 DG A "C4'" 1
ATOM 51 O "O4'" . DG A 1 4 ? -18.609 23.532 1.526 1.00 13.49 ? 1004 DG A "O4'" 1
ATOM 52 C "C3'" . DG A 1 4 ? -20.476 22.634 2.501 1.00 16.11 ? 1004 DG A "C3'" 1
ATOM 53 O "O3'" . DG A 1 4 ? -21.134 22.745 3.756 1.00 21.40 ? 1004 DG A "O3'" 1
ATOM 54 C "C2'" . DG A 1 4 ? -20.925 23.922 1.850 1.00 7.61 ? 1004 DG A "C2'" 1
ATOM 55 C "C1'" . DG A 1 4 ? -19.768 24.110 0.888 1.00 12.75 ? 1004 DG A "C1'" 1
ATOM 56 N N9 . DG A 1 4 ? -19.668 23.627 -0.532 1.00 8.63 ? 1004 DG A N9 1
ATOM 57 C C8 . DG A 1 4 ? -19.157 22.405 -0.956 1.00 7.32 ? 1004 DG A C8 1
ATOM 58 N N7 . DG A 1 4 ? -19.096 22.297 -2.258 1.00 4.94 ? 1004 DG A N7 1
ATOM 59 C C5 . DG A 1 4 ? -19.613 23.545 -2.649 1.00 2.65 ? 1004 DG A C5 1
ATOM 60 C C6 . DG A 1 4 ? -19.772 24.062 -3.944 1.00 6.47 ? 1004 DG A C6 1
ATOM 61 O O6 . DG A 1 4 ? -19.442 23.460 -4.922 1.00 7.97 ? 1004 DG A O6 1
ATOM 62 N N1 . DG A 1 4 ? -20.277 25.341 -4.041 1.00 2.26 ? 1004 DG A N1 1
ATOM 63 C C2 . DG A 1 4 ? -20.652 26.048 -2.936 1.00 3.15 ? 1004 DG A C2 1
ATOM 64 N N2 . DG A 1 4 ? -21.175 27.257 -3.123 1.00 7.79 ? 1004 DG A N2 1
ATOM 65 N N3 . DG A 1 4 ? -20.470 25.614 -1.700 1.00 4.70 ? 1004 DG A N3 1
ATOM 66 C C4 . DG A 1 4 ? -19.949 24.354 -1.640 1.00 3.47 ? 1004 DG A C4 1
ATOM 67 P P . DG A 1 5 ? -22.451 21.891 3.973 1.00 18.21 ? 1005 DG A P 1
ATOM 68 O OP1 . DG A 1 5 ? -22.698 22.182 5.391 1.00 25.57 ? 1005 DG A OP1 1
ATOM 69 O OP2 . DG A 1 5 ? -22.142 20.535 3.535 1.00 15.84 ? 1005 DG A OP2 1
ATOM 70 O "O5'" . DG A 1 5 ? -23.600 22.600 3.180 1.00 16.99 ? 1005 DG A "O5'" 1
ATOM 71 C "C5'" . DG A 1 5 ? -23.988 23.825 3.710 1.00 19.09 ? 1005 DG A "C5'" 1
ATOM 72 C "C4'" . DG A 1 5 ? -24.730 24.596 2.656 1.00 21.58 ? 1005 DG A "C4'" 1
ATOM 73 O "O4'" . DG A 1 5 ? -23.905 24.745 1.451 1.00 21.76 ? 1005 DG A "O4'" 1
ATOM 74 C "C3'" . DG A 1 5 ? -25.988 23.859 2.271 1.00 23.65 ? 1005 DG A "C3'" 1
ATOM 75 O "O3'" . DG A 1 5 ? -27.148 24.688 2.420 1.00 24.91 ? 1005 DG A "O3'" 1
ATOM 76 C "C2'" . DG A 1 5 ? -25.720 23.313 0.851 1.00 22.42 ? 1005 DG A "C2'" 1
ATOM 77 C "C1'" . DG A 1 5 ? -24.666 24.289 0.336 1.00 19.12 ? 1005 DG A "C1'" 1
ATOM 78 N N9 . DG A 1 5 ? -23.998 23.706 -0.797 1.00 12.43 ? 1005 DG A N9 1
ATOM 79 C C8 . DG A 1 5 ? -23.314 22.522 -0.823 1.00 11.34 ? 1005 DG A C8 1
ATOM 80 N N7 . DG A 1 5 ? -22.870 22.260 -2.024 1.00 9.19 ? 1005 DG A N7 1
ATOM 81 C C5 . DG A 1 5 ? -23.292 23.332 -2.802 1.00 6.19 ? 1005 DG A C5 1
ATOM 82 C C6 . DG A 1 5 ? -23.100 23.520 -4.187 1.00 4.81 ? 1005 DG A C6 1
ATOM 83 O O6 . DG A 1 5 ? -22.470 22.737 -4.837 1.00 11.16 ? 1005 DG A O6 1
ATOM 84 N N1 . DG A 1 5 ? -23.615 24.636 -4.700 1.00 3.31 ? 1005 DG A N1 1
ATOM 85 C C2 . DG A 1 5 ? -24.299 25.508 -3.899 1.00 6.90 ? 1005 DG A C2 1
ATOM 86 N N2 . DG A 1 5 ? -24.774 26.590 -4.467 1.00 8.57 ? 1005 DG A N2 1
ATOM 87 N N3 . DG A 1 5 ? -24.494 25.390 -2.589 1.00 10.16 ? 1005 DG A N3 1
ATOM 88 C C4 . DG A 1 5 ? -23.965 24.235 -2.090 1.00 9.64 ? 1005 DG A C4 1
ATOM 89 P P . DT A 1 6 ? -28.498 23.983 3.026 1.00 23.51 ? 1006 DT A P 1
ATOM 90 O OP1 . DT A 1 6 ? -28.580 22.576 2.585 1.00 15.12 ? 1006 DT A OP1 1
ATOM 91 O OP2 . DT A 1 6 ? -29.598 24.921 2.863 1.00 25.10 ? 1006 DT A OP2 1
ATOM 92 O "O5'" . DT A 1 6 ? -28.136 23.857 4.557 1.00 24.67 ? 1006 DT A "O5'" 1
ATOM 93 C "C5'" . DT A 1 6 ? -27.743 24.997 5.304 1.00 27.49 ? 1006 DT A "C5'" 1
ATOM 94 C "C4'" . DT A 1 6 ? -28.107 24.748 6.770 1.00 26.60 ? 1006 DT A "C4'" 1
ATOM 95 O "O4'" . DT A 1 6 ? -29.496 24.327 6.883 1.00 25.69 ? 1006 DT A "O4'" 1
ATOM 96 C "C3'" . DT A 1 6 ? -27.294 23.638 7.365 1.00 25.42 ? 1006 DT A "C3'" 1
ATOM 97 O "O3'" . DT A 1 6 ? -26.976 24.129 8.642 1.00 25.26 ? 1006 DT A "O3'" 1
ATOM 98 C "C2'" . DT A 1 6 ? -28.201 22.408 7.364 1.00 21.30 ? 1006 DT A "C2'" 1
ATOM 99 C "C1'" . DT A 1 6 ? -29.578 23.054 7.454 1.00 21.28 ? 1006 DT A "C1'" 1
ATOM 100 N N1 . DT A 1 6 ? -30.609 22.163 6.878 1.00 20.86 ? 1006 DT A N1 1
ATOM 101 C C2 . DT A 1 6 ? -31.419 21.438 7.747 1.00 21.09 ? 1006 DT A C2 1
ATOM 102 O O2 . DT A 1 6 ? -31.418 21.518 8.969 1.00 19.79 ? 1006 DT A O2 1
ATOM 103 N N3 . DT A 1 6 ? -32.264 20.591 7.143 1.00 17.15 ? 1006 DT A N3 1
ATOM 104 C C4 . DT A 1 6 ? -32.401 20.383 5.806 1.00 16.38 ? 1006 DT A C4 1
ATOM 105 O O4 . DT A 1 6 ? -33.224 19.568 5.454 1.00 17.42 ? 1006 DT A O4 1
ATOM 106 C C5 . DT A 1 6 ? -31.525 21.129 4.929 1.00 18.77 ? 1006 DT A C5 1
ATOM 107 C C7 . DT A 1 6 ? -31.418 20.913 3.435 1.00 19.67 ? 1006 DT A C7 1
ATOM 108 C C6 . DT A 1 6 ? -30.685 21.971 5.523 1.00 22.17 ? 1006 DT A C6 1
ATOM 109 P P . DT A 1 7 ? -25.615 23.714 9.377 1.00 26.97 ? 1007 DT A P 1
ATOM 110 O OP1 . DT A 1 7 ? -25.057 22.369 9.187 1.00 23.29 ? 1007 DT A OP1 1
ATOM 111 O OP2 . DT A 1 7 ? -25.862 24.350 10.687 1.00 27.53 ? 1007 DT A OP2 1
ATOM 112 O "O5'" . DT A 1 7 ? -24.563 24.593 8.625 1.00 23.92 ? 1007 DT A "O5'" 1
ATOM 113 C "C5'" . DT A 1 7 ? -23.280 24.791 9.086 1.00 22.10 ? 1007 DT A "C5'" 1
ATOM 114 C "C4'" . DT A 1 7 ? -22.826 26.060 8.386 1.00 20.82 ? 1007 DT A "C4'" 1
ATOM 115 O "O4'" . DT A 1 7 ? -21.427 26.155 8.685 1.00 25.03 ? 1007 DT A "O4'" 1
ATOM 116 C "C3'" . DT A 1 7 ? -22.911 26.016 6.844 1.00 19.37 ? 1007 DT A "C3'" 1
ATOM 117 O "O3'" . DT A 1 7 ? -23.040 27.343 6.387 1.00 20.31 ? 1007 DT A "O3'" 1
ATOM 118 C "C2'" . DT A 1 7 ? -21.572 25.399 6.478 1.00 18.27 ? 1007 DT A "C2'" 1
ATOM 119 C "C1'" . DT A 1 7 ? -20.710 26.201 7.478 1.00 20.68 ? 1007 DT A "C1'" 1
ATOM 120 N N1 . DT A 1 7 ? -19.329 25.762 7.674 1.00 17.09 ? 1007 DT A N1 1
ATOM 121 C C2 . DT A 1 7 ? -18.378 26.723 7.817 1.00 14.67 ? 1007 DT A C2 1
ATOM 122 O O2 . DT A 1 7 ? -18.682 27.861 7.787 1.00 18.95 ? 1007 DT A O2 1
ATOM 123 N N3 . DT A 1 7 ? -17.099 26.319 7.973 1.00 11.38 ? 1007 DT A N3 1
ATOM 124 C C4 . DT A 1 7 ? -16.716 25.002 7.988 1.00 13.08 ? 1007 DT A C4 1
ATOM 125 O O4 . DT A 1 7 ? -15.533 24.665 8.098 1.00 14.92 ? 1007 DT A O4 1
ATOM 126 C C5 . DT A 1 7 ? -17.766 24.017 7.857 1.00 14.22 ? 1007 DT A C5 1
ATOM 127 C C7 . DT A 1 7 ? -17.455 22.553 7.867 1.00 13.87 ? 1007 DT A C7 1
ATOM 128 C C6 . DT A 1 7 ? -19.002 24.430 7.677 1.00 16.96 ? 1007 DT A C6 1
ATOM 129 P P . DA A 1 8 ? -23.969 27.698 5.178 1.00 19.60 ? 1008 DA A P 1
ATOM 130 O OP1 . DA A 1 8 ? -24.191 29.102 5.039 1.00 18.83 ? 1008 DA A OP1 1
ATOM 131 O OP2 . DA A 1 8 ? -25.144 26.802 5.243 1.00 23.17 ? 1008 DA A OP2 1
ATOM 132 O "O5'" . DA A 1 8 ? -23.041 27.175 3.980 1.00 20.60 ? 1008 DA A "O5'" 1
ATOM 133 C "C5'" . DA A 1 8 ? -22.140 28.107 3.257 1.00 18.93 ? 1008 DA A "C5'" 1
ATOM 134 C "C4'" . DA A 1 8 ? -20.853 28.399 4.010 1.00 15.05 ? 1008 DA A "C4'" 1
ATOM 135 O "O4'" . DA A 1 8 ? -20.001 27.230 4.068 1.00 18.46 ? 1008 DA A "O4'" 1
ATOM 136 C "C3'" . DA A 1 8 ? -19.991 29.391 3.319 1.00 16.11 ? 1008 DA A "C3'" 1
ATOM 137 O "O3'" . DA A 1 8 ? -20.605 30.634 3.557 1.00 16.44 ? 1008 DA A "O3'" 1
ATOM 138 C "C2'" . DA A 1 8 ? -18.684 29.120 4.059 1.00 14.30 ? 1008 DA A "C2'" 1
ATOM 139 C "C1'" . DA A 1 8 ? -18.663 27.631 4.317 1.00 16.78 ? 1008 DA A "C1'" 1
ATOM 140 N N9 . DA A 1 8 ? -17.873 26.836 3.401 1.00 13.64 ? 1008 DA A N9 1
ATOM 141 C C8 . DA A 1 8 ? -17.890 27.040 2.053 1.00 12.66 ? 1008 DA A C8 1
ATOM 142 N N7 . DA A 1 8 ? -17.132 26.222 1.380 1.00 10.96 ? 1008 DA A N7 1
ATOM 143 C C5 . DA A 1 8 ? -16.563 25.404 2.349 1.00 13.29 ? 1008 DA A C5 1
ATOM 144 C C6 . DA A 1 8 ? -15.662 24.332 2.273 1.00 12.28 ? 1008 DA A C6 1
ATOM 145 N N6 . DA A 1 8 ? -15.145 23.851 1.154 1.00 14.83 ? 1008 DA A N6 1
ATOM 146 N N1 . DA A 1 8 ? -15.249 23.738 3.425 1.00 15.45 ? 1008 DA A N1 1
ATOM 147 C C2 . DA A 1 8 ? -15.751 24.218 4.604 1.00 11.17 ? 1008 DA A C2 1
ATOM 148 N N3 . DA A 1 8 ? -16.615 25.186 4.784 1.00 13.50 ? 1008 DA A N3 1
ATOM 149 C C4 . DA A 1 8 ? -17.012 25.758 3.614 1.00 13.33 ? 1008 DA A C4 1
ATOM 150 P P . DG A 1 9 ? -20.074 32.007 3.043 1.00 23.57 ? 1009 DG A P 1
ATOM 151 O OP1 . DG A 1 9 ? -18.764 32.339 3.651 1.00 22.77 ? 1009 DG A OP1 1
ATOM 152 O OP2 . DG A 1 9 ? -21.235 32.845 3.003 1.00 15.74 ? 1009 DG A OP2 1
ATOM 153 O "O5'" . DG A 1 9 ? -19.765 31.643 1.492 1.00 23.39 ? 1009 DG A "O5'" 1
ATOM 154 C "C5'" . DG A 1 9 ? -20.910 31.506 0.645 1.00 19.43 ? 1009 DG A "C5'" 1
ATOM 155 C "C4'" . DG A 1 9 ? -20.769 32.234 -0.637 1.00 14.05 ? 1009 DG A "C4'" 1
ATOM 156 O "O4'" . DG A 1 9 ? -19.498 31.912 -1.226 1.00 17.40 ? 1009 DG A "O4'" 1
ATOM 157 C "C3'" . DG A 1 9 ? -21.751 31.650 -1.621 1.00 16.02 ? 1009 DG A "C3'" 1
ATOM 158 O "O3'" . DG A 1 9 ? -22.963 32.341 -1.408 1.00 16.05 ? 1009 DG A "O3'" 1
ATOM 159 C "C2'" . DG A 1 9 ? -21.093 32.055 -2.928 1.00 12.60 ? 1009 DG A "C2'" 1
ATOM 160 C "C1'" . DG A 1 9 ? -19.621 31.842 -2.647 1.00 9.69 ? 1009 DG A "C1'" 1
ATOM 161 N N9 . DG A 1 9 ? -19.065 30.563 -3.041 1.00 8.64 ? 1009 DG A N9 1
ATOM 162 C C8 . DG A 1 9 ? -18.477 29.663 -2.187 1.00 6.05 ? 1009 DG A C8 1
ATOM 163 N N7 . DG A 1 9 ? -18.059 28.628 -2.787 1.00 5.14 ? 1009 DG A N7 1
ATOM 164 C C5 . DG A 1 9 ? -18.338 28.891 -4.147 1.00 5.67 ? 1009 DG A C5 1
ATOM 165 C C6 . DG A 1 9 ? -18.134 28.156 -5.360 1.00 7.97 ? 1009 DG A C6 1
ATOM 166 O O6 . DG A 1 9 ? -17.591 27.051 -5.533 1.00 8.79 ? 1009 DG A O6 1
ATOM 167 N N1 . DG A 1 9 ? -18.598 28.788 -6.535 1.00 9.08 ? 1009 DG A N1 1
ATOM 168 C C2 . DG A 1 9 ? -19.225 29.975 -6.531 1.00 7.19 ? 1009 DG A C2 1
ATOM 169 N N2 . DG A 1 9 ? -19.644 30.527 -7.667 1.00 10.27 ? 1009 DG A N2 1
ATOM 170 N N3 . DG A 1 9 ? -19.394 30.648 -5.441 1.00 9.91 ? 1009 DG A N3 1
ATOM 171 C C4 . DG A 1 9 ? -18.960 30.043 -4.309 1.00 4.53 ? 1009 DG A C4 1
ATOM 172 P P . DG A 1 10 ? -24.343 31.829 -1.952 1.00 20.14 ? 1010 DG A P 1
ATOM 173 O OP1 . DG A 1 10 ? -25.238 32.869 -1.546 1.00 18.26 ? 1010 DG A OP1 1
ATOM 174 O OP2 . DG A 1 10 ? -24.555 30.371 -1.655 1.00 17.28 ? 1010 DG A OP2 1
ATOM 175 O "O5'" . DG A 1 10 ? -24.153 31.956 -3.532 1.00 19.49 ? 1010 DG A "O5'" 1
ATOM 176 C "C5'" . DG A 1 10 ? -24.397 33.162 -4.261 1.00 18.06 ? 1010 DG A "C5'" 1
ATOM 177 C "C4'" . DG A 1 10 ? -24.549 32.811 -5.751 1.00 18.79 ? 1010 DG A "C4'" 1
ATOM 178 O "O4'" . DG A 1 10 ? -23.309 32.211 -6.223 1.00 18.78 ? 1010 DG A "O4'" 1
ATOM 179 C "C3'" . DG A 1 10 ? -25.571 31.718 -6.063 1.00 20.11 ? 1010 DG A "C3'" 1
ATOM 180 O "O3'" . DG A 1 10 ? -26.906 32.234 -6.093 1.00 24.34 ? 1010 DG A "O3'" 1
ATOM 181 C "C2'" . DG A 1 10 ? -25.149 31.240 -7.433 1.00 18.44 ? 1010 DG A "C2'" 1
ATOM 182 C "C1'" . DG A 1 10 ? -23.634 31.349 -7.303 1.00 16.25 ? 1010 DG A "C1'" 1
ATOM 183 N N9 . DG A 1 10 ? -22.993 30.146 -6.908 1.00 11.41 ? 1010 DG A N9 1
ATOM 184 C C8 . DG A 1 10 ? -22.694 29.856 -5.631 1.00 11.64 ? 1010 DG A C8 1
ATOM 185 N N7 . DG A 1 10 ? -22.130 28.718 -5.475 1.00 9.31 ? 1010 DG A N7 1
ATOM 186 C C5 . DG A 1 10 ? -22.004 28.266 -6.746 1.00 8.64 ? 1010 DG A C5 1
ATOM 187 C C6 . DG A 1 10 ? -21.412 27.125 -7.225 1.00 7.14 ? 1010 DG A C6 1
ATOM 188 O O6 . DG A 1 10 ? -20.837 26.215 -6.686 1.00 12.12 ? 1010 DG A O6 1
ATOM 189 N N1 . DG A 1 10 ? -21.504 27.018 -8.610 1.00 10.70 ? 1010 DG A N1 1
ATOM 190 C C2 . DG A 1 10 ? -22.067 27.920 -9.451 1.00 9.83 ? 1010 DG A C2 1
ATOM 191 N N2 . DG A 1 10 ? -22.041 27.566 -10.749 1.00 15.97 ? 1010 DG A N2 1
ATOM 192 N N3 . DG A 1 10 ? -22.635 29.007 -9.042 1.00 11.05 ? 1010 DG A N3 1
ATOM 193 C C4 . DG A 1 10 ? -22.590 29.099 -7.668 1.00 11.33 ? 1010 DG A C4 1
ATOM 194 P P . DG A 1 11 ? -28.126 31.252 -6.036 1.00 25.39 ? 1011 DG A P 1
ATOM 195 O OP1 . DG A 1 11 ? -29.292 32.111 -5.852 1.00 26.44 ? 1011 DG A OP1 1
ATOM 196 O OP2 . DG A 1 11 ? -27.837 30.030 -5.259 1.00 27.28 ? 1011 DG A OP2 1
ATOM 197 O "O5'" . DG A 1 11 ? -28.175 30.638 -7.490 1.00 30.14 ? 1011 DG A "O5'" 1
ATOM 198 C "C5'" . DG A 1 11 ? -28.564 31.412 -8.629 1.00 25.86 ? 1011 DG A "C5'" 1
ATOM 199 C "C4'" . DG A 1 11 ? -28.510 30.459 -9.808 1.00 25.23 ? 1011 DG A "C4'" 1
ATOM 200 O "O4'" . DG A 1 11 ? -27.245 29.750 -10.005 1.00 22.61 ? 1011 DG A "O4'" 1
ATOM 201 C "C3'" . DG A 1 11 ? -29.545 29.389 -9.786 1.00 26.66 ? 1011 DG A "C3'" 1
ATOM 202 O "O3'" . DG A 1 11 ? -29.948 29.466 -11.094 1.00 35.04 ? 1011 DG A "O3'" 1
ATOM 203 C "C2'" . DG A 1 11 ? -28.779 28.094 -9.599 1.00 21.39 ? 1011 DG A "C2'" 1
ATOM 204 C "C1'" . DG A 1 11 ? -27.375 28.358 -10.082 1.00 18.86 ? 1011 DG A "C1'" 1
ATOM 205 N N9 . DG A 1 11 ? -26.459 27.631 -9.202 1.00 15.19 ? 1011 DG A N9 1
ATOM 206 C C8 . DG A 1 11 ? -26.341 27.788 -7.835 1.00 12.73 ? 1011 DG A C8 1
ATOM 207 N N7 . DG A 1 11 ? -25.525 26.984 -7.247 1.00 9.41 ? 1011 DG A N7 1
ATOM 208 C C5 . DG A 1 11 ? -25.049 26.217 -8.305 1.00 10.80 ? 1011 DG A C5 1
ATOM 209 C C6 . DG A 1 11 ? -24.104 25.202 -8.310 1.00 12.35 ? 1011 DG A C6 1
ATOM 210 O O6 . DG A 1 11 ? -23.410 24.627 -7.382 1.00 17.67 ? 1011 DG A O6 1
ATOM 211 N N1 . DG A 1 11 ? -23.981 24.727 -9.628 1.00 13.32 ? 1011 DG A N1 1
ATOM 212 C C2 . DG A 1 11 ? -24.599 25.191 -10.773 1.00 12.47 ? 1011 DG A C2 1
ATOM 213 N N2 . DG A 1 11 ? -24.271 24.614 -11.955 1.00 11.74 ? 1011 DG A N2 1
ATOM 214 N N3 . DG A 1 11 ? -25.462 26.166 -10.747 1.00 10.95 ? 1011 DG A N3 1
ATOM 215 C C4 . DG A 1 11 ? -25.632 26.612 -9.500 1.00 9.57 ? 1011 DG A C4 1
ATOM 216 P P . DT A 1 12 ? -31.460 29.526 -11.551 1.00 36.44 ? 1012 DT A P 1
ATOM 217 O OP1 . DT A 1 12 ? -32.065 30.765 -11.009 1.00 37.86 ? 1012 DT A OP1 1
ATOM 218 O OP2 . DT A 1 12 ? -32.064 28.213 -11.270 1.00 35.58 ? 1012 DT A OP2 1
ATOM 219 O "O5'" . DT A 1 12 ? -31.141 29.732 -13.102 1.00 34.69 ? 1012 DT A "O5'" 1
HETATM 220 NA NA . NA B 2 . ? -25.677 30.604 -12.183 1.00 14.52 ? 4 NA A NA 1
HETATM 221 K K . K C 3 . ? -21.196 23.161 -7.259 0.50 12.49 ? 30 K A K 1
HETATM 222 K K . K D 3 . ? -18.150 24.747 -7.311 0.50 15.07 ? 31 K A K 1
HETATM 223 K K . K E 3 . ? -15.327 26.546 -7.271 0.25 14.62 ? 32 K A K 1
HETATM 224 O O6 . NII F 4 . ? -26.346 17.500 -0.091 0.50 32.32 ? 1 NII A O6 1
HETATM 225 C C30 . NII F 4 . ? -26.792 18.413 -1.101 0.50 32.23 ? 1 NII A C30 1
HETATM 226 C C29 . NII F 4 . ? -25.858 18.381 -2.313 0.50 28.48 ? 1 NII A C29 1
HETATM 227 C C28 . NII F 4 . ? -24.846 19.537 -2.482 0.50 24.32 ? 1 NII A C28 1
HETATM 228 N N3 . NII F 4 . ? -24.524 19.125 -3.827 0.50 23.96 ? 1 NII A N3 1
HETATM 229 C C9 . NII F 4 . ? -24.816 19.667 -5.038 0.50 23.30 ? 1 NII A C9 1
HETATM 230 C C8 . NII F 4 . ? -24.323 18.826 -5.969 0.50 22.02 ? 1 NII A C8 1
HETATM 231 C C7 . NII F 4 . ? -24.454 19.140 -7.288 0.50 22.71 ? 1 NII A C7 1
HETATM 232 C C14 . NII F 4 . ? -23.941 18.223 -8.133 0.50 23.38 ? 1 NII A C14 1
HETATM 233 O O1 . NII F 4 . ? -23.404 17.194 -7.654 0.50 24.25 ? 1 NII A O1 1
HETATM 234 N N2 . NII F 4 . ? -24.027 18.396 -9.432 0.50 23.25 ? 1 NII A N2 1
HETATM 235 C C18 . NII F 4 . ? -23.437 17.313 -10.244 0.50 23.94 ? 1 NII A C18 1
HETATM 236 C C19 . NII F 4 . ? -22.902 16.186 -9.351 0.50 25.40 ? 1 NII A C19 1
HETATM 237 C C20 . NII F 4 . ? -22.541 14.913 -10.128 0.50 28.34 ? 1 NII A C20 1
HETATM 238 N N5 . NII F 4 . ? -21.272 14.320 -9.640 0.50 28.78 ? 1 NII A N5 1
HETATM 239 C C24 . NII F 4 . ? -21.501 13.584 -8.389 0.50 29.25 ? 1 NII A C24 1
HETATM 240 C C23 . NII F 4 . ? -20.754 13.375 -10.649 0.50 29.55 ? 1 NII A C23 1
HETATM 241 C C13 . NII F 4 . ? -24.628 19.491 -9.960 0.50 23.70 ? 1 NII A C13 1
HETATM 242 O O4 . NII F 4 . ? -24.664 19.578 -11.214 0.50 24.43 ? 1 NII A O4 1
HETATM 243 C C10 . NII F 4 . ? -25.449 20.855 -5.453 0.50 23.47 ? 1 NII A C10 1
HETATM 244 C C11 . NII F 4 . ? -25.967 21.755 -4.557 0.50 23.86 ? 1 NII A C11 1
HETATM 245 O O2 . NII F 4 . ? -25.821 21.450 -3.356 0.50 24.03 ? 1 NII A O2 1
HETATM 246 N N1 . NII F 4 . ? -26.585 22.889 -4.959 0.50 23.26 ? 1 NII A N1 1
HETATM 247 C C15 . NII F 4 . ? -27.139 23.806 -3.934 0.50 24.27 ? 1 NII A C15 1
HETATM 248 C C16 . NII F 4 . ? -27.578 25.169 -4.486 0.50 28.81 ? 1 NII A C16 1
HETATM 249 C C17 . NII F 4 . ? -29.079 25.434 -4.370 0.50 32.08 ? 1 NII A C17 1
HETATM 250 N N4 . NII F 4 . ? -29.386 26.645 -5.155 0.50 33.47 ? 1 NII A N4 1
HETATM 251 C C21 . NII F 4 . ? -29.792 26.259 -6.515 0.50 33.26 ? 1 NII A C21 1
HETATM 252 C C22 . NII F 4 . ? -30.457 27.433 -4.517 0.50 35.49 ? 1 NII A C22 1
HETATM 253 C C5 . NII F 4 . ? -25.585 21.156 -6.812 0.50 23.39 ? 1 NII A C5 1
HETATM 254 C C6 . NII F 4 . ? -26.215 22.316 -7.222 0.50 22.53 ? 1 NII A C6 1
HETATM 255 C C12 . NII F 4 . ? -26.715 23.178 -6.257 0.50 23.10 ? 1 NII A C12 1
HETATM 256 O O3 . NII F 4 . ? -27.314 24.231 -6.576 0.50 23.96 ? 1 NII A O3 1
HETATM 257 C C4 . NII F 4 . ? -25.081 20.273 -7.757 0.50 23.38 ? 1 NII A C4 1
HETATM 258 C C3 . NII F 4 . ? -25.191 20.493 -9.133 0.50 23.47 ? 1 NII A C3 1
HETATM 259 C C2 . NII F 4 . ? -25.859 21.681 -9.525 0.50 23.29 ? 1 NII A C2 1
HETATM 260 C C1 . NII F 4 . ? -26.355 22.564 -8.575 0.50 21.94 ? 1 NII A C1 1
HETATM 261 N N6 . NII F 4 . ? -26.121 22.184 -10.752 0.50 24.23 ? 1 NII A N6 1
HETATM 262 C C25 . NII F 4 . ? -25.849 21.686 -12.074 0.50 24.33 ? 1 NII A C25 1
HETATM 263 C C26 . NII F 4 . ? -27.240 21.922 -12.663 0.50 28.25 ? 1 NII A C26 1
HETATM 264 C C27 . NII F 4 . ? -27.701 20.751 -13.529 0.50 31.26 ? 1 NII A C27 1
HETATM 265 O O5 . NII F 4 . ? -27.406 20.984 -14.913 0.50 30.07 ? 1 NII A O5 1
HETATM 266 O O6 . NII G 4 . ? -10.792 31.621 11.660 0.50 39.84 ? 2 NII A O6 1
HETATM 267 C C30 . NII G 4 . ? -9.632 30.793 11.713 0.50 40.44 ? 2 NII A C30 1
HETATM 268 C C29 . NII G 4 . ? -10.005 29.312 11.691 0.50 40.45 ? 2 NII A C29 1
HETATM 269 C C28 . NII G 4 . ? -11.449 29.175 11.237 0.50 38.81 ? 2 NII A C28 1
HETATM 270 N N3 . NII G 4 . ? -11.754 27.760 11.258 0.50 38.84 ? 2 NII A N3 1
HETATM 271 C C9 . NII G 4 . ? -13.069 27.471 11.264 0.50 38.50 ? 2 NII A C9 1
HETATM 272 C C8 . NII G 4 . ? -13.904 28.574 11.270 0.50 38.32 ? 2 NII A C8 1
HETATM 273 C C7 . NII G 4 . ? -15.272 28.393 11.276 0.50 38.02 ? 2 NII A C7 1
HETATM 274 C C14 . NII G 4 . ? -16.077 29.506 11.278 0.50 38.74 ? 2 NII A C14 1
HETATM 275 O O1 . NII G 4 . ? -15.508 30.629 11.263 0.50 39.00 ? 2 NII A O1 1
HETATM 276 N N2 . NII G 4 . ? -17.418 29.359 11.298 0.50 38.88 ? 2 NII A N2 1
HETATM 277 C C18 . NII G 4 . ? -18.313 30.532 11.293 0.50 38.98 ? 2 NII A C18 1
HETATM 278 C C19 . NII G 4 . ? -18.983 30.689 9.917 0.50 40.61 ? 2 NII A C19 1
HETATM 279 C C20 . NII G 4 . ? -18.705 32.060 9.293 0.50 41.17 ? 2 NII A C20 1
HETATM 280 N N5 . NII G 4 . ? -18.124 32.015 7.930 0.50 42.47 ? 2 NII A N5 1
HETATM 281 C C24 . NII G 4 . ? -17.021 31.043 7.849 0.50 42.25 ? 2 NII A C24 1
HETATM 282 C C23 . NII G 4 . ? -19.147 31.728 6.901 0.50 41.34 ? 2 NII A C23 1
HETATM 283 C C13 . NII G 4 . ? -17.979 28.136 11.309 0.50 38.84 ? 2 NII A C13 1
HETATM 284 O O4 . NII G 4 . ? -19.233 28.077 11.333 0.50 39.37 ? 2 NII A O4 1
HETATM 285 C C10 . NII G 4 . ? -13.605 26.171 11.275 0.50 38.24 ? 2 NII A C10 1
HETATM 286 C C11 . NII G 4 . ? -12.822 25.012 11.274 0.50 38.81 ? 2 NII A C11 1
HETATM 287 O O2 . NII G 4 . ? -11.571 25.082 11.270 0.50 39.41 ? 2 NII A O2 1
HETATM 288 N N1 . NII G 4 . ? -13.387 23.790 11.288 0.50 38.86 ? 2 NII A N1 1
HETATM 289 C C15 . NII G 4 . ? -12.501 22.609 11.281 0.50 38.95 ? 2 NII A C15 1
HETATM 290 C C16 . NII G 4 . ? -11.852 22.413 9.901 0.50 40.36 ? 2 NII A C16 1
HETATM 291 C C17 . NII G 4 . ? -12.600 21.378 9.065 0.50 40.41 ? 2 NII A C17 1
HETATM 292 N N4 . NII G 4 . ? -12.110 21.386 7.673 0.50 41.73 ? 2 NII A N4 1
HETATM 293 C C21 . NII G 4 . ? -11.671 20.038 7.260 0.50 41.38 ? 2 NII A C21 1
HETATM 294 C C22 . NII G 4 . ? -13.207 21.807 6.794 0.50 41.31 ? 2 NII A C22 1
HETATM 295 C C5 . NII G 4 . ? -14.988 26.015 11.288 0.50 37.54 ? 2 NII A C5 1
HETATM 296 C C6 . NII G 4 . ? -15.547 24.747 11.300 0.50 38.10 ? 2 NII A C6 1
HETATM 297 C C12 . NII G 4 . ? -14.732 23.641 11.298 0.50 38.71 ? 2 NII A C12 1
HETATM 298 O O3 . NII G 4 . ? -15.303 22.519 11.308 0.50 38.91 ? 2 NII A O3 1
HETATM 299 C C4 . NII G 4 . ? -15.819 27.123 11.290 0.50 37.55 ? 2 NII A C4 1
HETATM 300 C C3 . NII G 4 . ? -17.200 26.971 11.306 0.50 38.21 ? 2 NII A C3 1
HETATM 301 C C2 . NII G 4 . ? -17.759 25.680 11.322 0.50 38.50 ? 2 NII A C2 1
HETATM 302 C C1 . NII G 4 . ? -16.928 24.566 11.323 0.50 38.21 ? 2 NII A C1 1
HETATM 303 N N6 . NII G 4 . ? -19.106 25.503 11.345 0.50 38.78 ? 2 NII A N6 1
HETATM 304 C C25 . NII G 4 . ? -19.722 24.190 11.356 0.50 38.97 ? 2 NII A C25 1
HETATM 305 C C26 . NII G 4 . ? -20.867 24.323 12.361 0.50 40.00 ? 2 NII A C26 1
HETATM 306 C C27 . NII G 4 . ? -21.647 23.011 12.511 0.50 40.92 ? 2 NII A C27 1
HETATM 307 O O5 . NII G 4 . ? -20.802 21.918 12.879 0.50 41.02 ? 2 NII A O5 1
HETATM 308 O O6 . NII H 4 . ? -8.316 25.804 16.687 0.25 35.33 ? 3 NII A O6 1
HETATM 309 C C30 . NII H 4 . ? -9.139 24.650 16.535 0.25 34.89 ? 3 NII A C30 1
HETATM 310 C C29 . NII H 4 . ? -9.619 24.505 15.090 0.25 33.77 ? 3 NII A C29 1
HETATM 311 C C28 . NII H 4 . ? -10.683 25.547 14.769 0.25 32.02 ? 3 NII A C28 1
HETATM 312 N N3 . NII H 4 . ? -11.968 24.857 14.785 0.25 31.77 ? 3 NII A N3 1
HETATM 313 C C9 . NII H 4 . ? -13.108 25.586 14.704 0.25 31.41 ? 3 NII A C9 1
HETATM 314 C C8 . NII H 4 . ? -12.974 26.966 14.609 0.25 31.68 ? 3 NII A C8 1
HETATM 315 C C7 . NII H 4 . ? -14.093 27.778 14.517 0.25 31.50 ? 3 NII A C7 1
HETATM 316 C C14 . NII H 4 . ? -13.953 29.151 14.423 0.25 31.75 ? 3 NII A C14 1
HETATM 317 O O1 . NII H 4 . ? -12.806 29.653 14.418 0.25 31.78 ? 3 NII A O1 1
HETATM 318 N N2 . NII H 4 . ? -15.056 29.912 14.330 0.25 31.77 ? 3 NII A N2 1
HETATM 319 C C18 . NII H 4 . ? -14.967 31.369 14.247 0.25 32.05 ? 3 NII A C18 1
HETATM 320 C C19 . NII H 4 . ? -14.416 31.938 12.946 0.25 33.92 ? 3 NII A C19 1
HETATM 321 C C20 . NII H 4 . ? -14.222 33.447 13.138 0.25 35.53 ? 3 NII A C20 1
HETATM 322 N N5 . NII H 4 . ? -13.519 33.739 14.411 0.25 35.68 ? 3 NII A N5 1
HETATM 323 C C24 . NII H 4 . ? -12.331 34.575 14.159 0.25 36.55 ? 3 NII A C24 1
HETATM 324 C C23 . NII H 4 . ? -14.398 34.425 15.382 0.25 36.69 ? 3 NII A C23 1
HETATM 325 C C13 . NII H 4 . ? -16.292 29.386 14.349 0.25 31.68 ? 3 NII A C13 1
HETATM 326 O O4 . NII H 4 . ? -17.275 30.154 14.267 0.25 31.89 ? 3 NII A O4 1
HETATM 327 C C10 . NII H 4 . ? -14.392 25.005 14.734 0.25 31.49 ? 3 NII A C10 1
HETATM 328 C C11 . NII H 4 . ? -14.609 23.636 14.801 0.25 31.64 ? 3 NII A C11 1
HETATM 329 O O2 . NII H 4 . ? -13.632 22.867 14.883 0.25 31.84 ? 3 NII A O2 1
HETATM 330 N N1 . NII H 4 . ? -15.850 23.102 14.800 0.25 31.92 ? 3 NII A N1 1
HETATM 331 C C15 . NII H 4 . ? -15.999 21.636 14.920 0.25 32.32 ? 3 NII A C15 1
HETATM 332 C C16 . NII H 4 . ? -16.697 21.018 13.712 0.25 36.13 ? 3 NII A C16 1
HETATM 333 C C17 . NII H 4 . ? -16.214 19.593 13.431 0.25 38.63 ? 3 NII A C17 1
HETATM 334 N N4 . NII H 4 . ? -17.056 18.560 14.077 0.25 40.36 ? 3 NII A N4 1
HETATM 335 C C21 . NII H 4 . ? -18.277 18.291 13.289 0.25 41.00 ? 3 NII A C21 1
HETATM 336 C C22 . NII H 4 . ? -16.295 17.297 14.197 0.25 41.06 ? 3 NII A C22 1
HETATM 337 C C5 . NII H 4 . ? -15.507 25.846 14.619 0.25 30.89 ? 3 NII A C5 1
HETATM 338 C C6 . NII H 4 . ? -16.776 25.273 14.627 0.25 31.54 ? 3 NII A C6 1
HETATM 339 C C12 . NII H 4 . ? -16.933 23.896 14.721 0.25 31.80 ? 3 NII A C12 1
HETATM 340 O O3 . NII H 4 . ? -18.094 23.430 14.729 0.25 31.80 ? 3 NII A O3 1
HETATM 341 C C4 . NII H 4 . ? -15.362 27.216 14.527 0.25 30.95 ? 3 NII A C4 1
HETATM 342 C C3 . NII H 4 . ? -16.490 28.005 14.448 0.25 31.55 ? 3 NII A C3 1
HETATM 343 C C2 . NII H 4 . ? -17.768 27.446 14.454 0.25 31.49 ? 3 NII A C2 1
HETATM 344 C C1 . NII H 4 . ? -17.906 26.069 14.546 0.25 31.66 ? 3 NII A C1 1
HETATM 345 N N6 . NII H 4 . ? -18.879 28.217 14.368 0.25 31.90 ? 3 NII A N6 1
HETATM 346 C C25 . NII H 4 . ? -20.218 27.641 14.372 0.25 32.12 ? 3 NII A C25 1
HETATM 347 C C26 . NII H 4 . ? -21.076 28.652 15.125 0.25 34.35 ? 3 NII A C26 1
HETATM 348 C C27 . NII H 4 . ? -22.020 27.962 16.111 0.25 35.72 ? 3 NII A C27 1
HETATM 349 O O5 . NII H 4 . ? -22.892 28.909 16.724 0.25 36.66 ? 3 NII A O5 1
HETATM 350 O O . HOH I 5 . ? -15.986 17.482 -3.558 1.00 16.61 ? 1013 HOH A O 1
HETATM 351 O O . HOH I 5 . ? -20.485 27.881 0.089 1.00 17.36 ? 1014 HOH A O 1
HETATM 352 O O . HOH I 5 . ? -18.330 17.586 -1.716 1.00 20.27 ? 1015 HOH A O 1
HETATM 353 O O . HOH I 5 . ? -16.402 31.847 4.131 1.00 26.04 ? 1016 HOH A O 1
HETATM 354 O O . HOH I 5 . ? -26.148 29.012 -3.276 1.00 18.76 ? 1017 HOH A O 1
HETATM 355 O O . HOH I 5 . ? -10.431 19.435 -5.677 1.00 20.26 ? 1018 HOH A O 1
HETATM 356 O O . HOH I 5 . ? -20.903 32.709 -9.279 1.00 18.05 ? 1019 HOH A O 1
HETATM 357 O O . HOH I 5 . ? -26.439 32.418 -11.678 1.00 19.34 ? 1020 HOH A O 1
HETATM 358 O O . HOH I 5 . ? -27.380 26.442 -1.419 1.00 30.46 ? 1021 HOH A O 1
HETATM 359 O O . HOH I 5 . ? -21.159 21.883 7.275 1.00 22.02 ? 1022 HOH A O 1
HETATM 360 O O . HOH I 5 . ? -23.387 28.552 -0.785 1.00 23.26 ? 1023 HOH A O 1
HETATM 361 O O . HOH I 5 . ? -15.665 19.561 5.284 1.00 26.71 ? 1024 HOH A O 1
HETATM 362 O O . HOH I 5 . ? -26.210 27.808 8.006 1.00 29.47 ? 1025 HOH A O 1
HETATM 363 O O . HOH I 5 . ? -27.588 21.011 3.304 1.00 20.21 ? 1026 HOH A O 1
HETATM 364 O O . HOH I 5 . ? -18.778 35.198 3.795 1.00 32.56 ? 1027 HOH A O 1
HETATM 365 O O . HOH I 5 . ? -6.023 19.079 -10.145 1.00 25.94 ? 1028 HOH A O 1
HETATM 366 O O . HOH I 5 . ? -30.499 19.045 11.435 1.00 32.56 ? 1029 HOH A O 1
HETATM 367 O O . HOH I 5 . ? -21.784 34.950 1.817 1.00 26.08 ? 1030 HOH A O 1
HETATM 368 O O . HOH I 5 . ? -23.169 20.999 9.716 1.00 31.47 ? 1031 HOH A O 1
HETATM 369 O O . HOH I 5 . ? -25.383 28.232 0.945 1.00 31.30 ? 1032 HOH A O 1
HETATM 370 O O . HOH I 5 . ? -25.120 21.273 6.437 1.00 27.73 ? 1033 HOH A O 1
HETATM 371 O O . HOH I 5 . ? -25.360 24.894 -14.755 1.00 21.81 ? 1034 HOH A O 1
HETATM 372 O O . HOH I 5 . ? -27.949 29.154 -0.962 1.00 35.62 ? 1035 HOH A O 1
HETATM 373 O O . HOH I 5 . ? -28.992 29.070 7.547 1.00 29.28 ? 1036 HOH A O 1
HETATM 374 O O . HOH I 5 . ? -22.859 31.089 7.326 1.00 42.00 ? 1037 HOH A O 1
HETATM 375 O O . HOH I 5 . ? -29.119 21.938 -0.191 1.00 31.60 ? 1038 HOH A O 1
HETATM 376 O O . HOH I 5 . ? -32.546 26.075 -11.074 1.00 35.45 ? 1039 HOH A O 1
HETATM 377 O O . HOH I 5 . ? -30.763 24.525 -10.506 1.00 35.96 ? 1040 HOH A O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1001 1001 DT T A . n
A 1 2 DA 2 1002 1002 DA A A . n
A 1 3 DG 3 1003 1003 DG G A . n
A 1 4 DG 4 1004 1004 DG G A . n
A 1 5 DG 5 1005 1005 DG G A . n
A 1 6 DT 6 1006 1006 DT T A . n
A 1 7 DT 7 1007 1007 DT T A . n
A 1 8 DA 8 1008 1008 DA A A . n
A 1 9 DG 9 1009 1009 DG G A . n
A 1 10 DG 10 1010 1010 DG G A . n
A 1 11 DG 11 1011 1011 DG G A . n
A 1 12 DT 12 1012 1012 DT T A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA 1 4 1 NA NA A .
C 3 K 1 30 30 K K A .
D 3 K 1 31 31 K K A .
E 3 K 1 32 32 K K A .
F 4 NII 1 1 1 NII P10 A .
G 4 NII 1 2 2 NII P10 A .
H 4 NII 1 3 3 NII P10 A .
I 5 HOH 1 1013 2 HOH HOH A .
I 5 HOH 2 1014 3 HOH HOH A .
I 5 HOH 3 1015 4 HOH HOH A .
I 5 HOH 4 1016 5 HOH HOH A .
I 5 HOH 5 1017 6 HOH HOH A .
I 5 HOH 6 1018 7 HOH HOH A .
I 5 HOH 7 1019 8 HOH HOH A .
I 5 HOH 8 1020 9 HOH HOH A .
I 5 HOH 9 1021 10 HOH HOH A .
I 5 HOH 10 1022 11 HOH HOH A .
I 5 HOH 11 1023 12 HOH HOH A .
I 5 HOH 12 1024 13 HOH HOH A .
I 5 HOH 13 1025 14 HOH HOH A .
I 5 HOH 14 1026 15 HOH HOH A .
I 5 HOH 15 1027 16 HOH HOH A .
I 5 HOH 16 1028 17 HOH HOH A .
I 5 HOH 17 1029 18 HOH HOH A .
I 5 HOH 18 1030 19 HOH HOH A .
I 5 HOH 19 1031 20 HOH HOH A .
I 5 HOH 20 1032 21 HOH HOH A .
I 5 HOH 21 1033 22 HOH HOH A .
I 5 HOH 22 1034 23 HOH HOH A .
I 5 HOH 23 1035 24 HOH HOH A .
I 5 HOH 24 1036 25 HOH HOH A .
I 5 HOH 25 1037 26 HOH HOH A .
I 5 HOH 26 1038 27 HOH HOH A .
I 5 HOH 27 1039 28 HOH HOH A .
I 5 HOH 28 1040 29 HOH HOH A .
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 880 ?
1 MORE -25 ?
1 'SSA (A^2)' 4250 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/3 0.5000000000 0.8660254038 0.0000000000 -30.6750000000 0.8660254038
-0.5000000000 0.0000000000 53.1306585222 0.0000000000 0.0000000000 -1.0000000000 -14.5433333333
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A K 30 ? C K .
2 1 A K 31 ? D K .
3 1 A K 32 ? E K .
4 1 A NII 3 ? H NII .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O6 ? A DG 4 ? A DG 1004 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 5 ? A DG 1005 ? 1_555 66.1 ?
2 O6 ? A DG 4 ? A DG 1004 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 11 ? A DG 1011 ? 1_555 118.6 ?
3 O6 ? A DG 5 ? A DG 1005 ? 1_555 K ? C K . ? A K 30 ? 1_555 O6 ? A DG 11 ? A DG 1011 ? 1_555 75.0 ?
4 O6 ? A DG 3 ? A DG 1003 ? 1_555 K ? D K . ? A K 31 ? 1_555 O6 ? A DG 9 ? A DG 1009 ? 1_555 66.6 ?
5 O6 ? A DG 3 ? A DG 1003 ? 1_555 K ? E K . ? A K 32 ? 1_555 O6 ? A DG 9 ? A DG 1009 ? 1_555 67.5 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2008-09-23
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2023-11-01
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' pdbx_struct_conn_angle
6 3 'Structure model' pdbx_struct_special_symmetry
7 3 'Structure model' struct_conn
8 3 'Structure model' struct_ref_seq
9 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
9 3 'Structure model' '_pdbx_struct_conn_angle.value'
10 3 'Structure model' '_struct_conn.pdbx_dist_value'
11 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
12 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
13 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
14 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
15 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
16 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
17 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
18 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
19 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
20 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
21 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
22 3 'Structure model' '_struct_conn.ptnr2_label_seq_id'
23 3 'Structure model' '_struct_ref_seq.db_align_beg'
24 3 'Structure model' '_struct_ref_seq.db_align_end'
25 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
26 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
27 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
REFMAC refinement 5.2.0019 ? 1
ADSC 'data collection' Quantum ? 2
d*TREK 'data reduction' . ? 3
d*TREK 'data scaling' . ? 4
PHASER phasing . ? 5
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 OP1
_pdbx_validate_close_contact.auth_asym_id_1 A
_pdbx_validate_close_contact.auth_comp_id_1 DT
_pdbx_validate_close_contact.auth_seq_id_1 1006
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 O
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 HOH
_pdbx_validate_close_contact.auth_seq_id_2 1026
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 1.99
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C5 A DG 1003 ? ? C6 A DG 1003 ? ? 1.356 1.419 -0.063 0.010 N
2 1 P A DG 1004 ? ? "O5'" A DG 1004 ? ? 1.533 1.593 -0.060 0.010 N
3 1 C4 A DG 1004 ? ? C5 A DG 1004 ? ? 1.336 1.379 -0.043 0.007 N
4 1 C4 A DG 1005 ? ? C5 A DG 1005 ? ? 1.332 1.379 -0.047 0.007 N
5 1 C6 A DG 1005 ? ? N1 A DG 1005 ? ? 1.332 1.391 -0.059 0.007 N
6 1 C4 A DG 1009 ? ? C5 A DG 1009 ? ? 1.319 1.379 -0.060 0.007 N
7 1 N7 A DG 1009 ? ? C8 A DG 1009 ? ? 1.267 1.305 -0.038 0.006 N
8 1 "O3'" A DG 1011 ? ? "C3'" A DG 1011 ? ? 1.371 1.419 -0.048 0.006 N
9 1 C6 A DG 1011 ? ? O6 A DG 1011 ? ? 1.294 1.237 0.057 0.009 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DA 1002 ? ? "C4'" A DA 1002 ? ? "C3'" A DA 1002 ? ? 100.87 104.50 -3.63 0.40 N
2 1 "O4'" A DG 1003 ? ? "C1'" A DG 1003 ? ? "C2'" A DG 1003 ? ? 100.29 105.90 -5.61 0.80 N
3 1 "O4'" A DG 1003 ? ? "C1'" A DG 1003 ? ? N9 A DG 1003 ? ? 116.56 108.30 8.26 0.30 N
4 1 C2 A DG 1003 ? ? N3 A DG 1003 ? ? C4 A DG 1003 ? ? 115.21 111.90 3.31 0.50 N
5 1 C4 A DG 1003 ? ? C5 A DG 1003 ? ? C6 A DG 1003 ? ? 114.86 118.80 -3.94 0.60 N
6 1 C5 A DG 1003 ? ? C6 A DG 1003 ? ? N1 A DG 1003 ? ? 117.72 111.50 6.22 0.50 N
7 1 C4 A DG 1003 ? ? C5 A DG 1003 ? ? N7 A DG 1003 ? ? 114.32 110.80 3.52 0.40 N
8 1 C5 A DG 1003 ? ? N7 A DG 1003 ? ? C8 A DG 1003 ? ? 101.26 104.30 -3.04 0.50 N
9 1 N1 A DG 1003 ? ? C6 A DG 1003 ? ? O6 A DG 1003 ? ? 113.08 119.90 -6.82 0.60 N
10 1 N9 A DG 1004 ? ? "C1'" A DG 1004 ? ? "C2'" A DG 1004 ? ? 127.60 114.30 13.30 1.40 N
11 1 "O4'" A DG 1004 ? ? "C1'" A DG 1004 ? ? N9 A DG 1004 ? ? 103.62 108.00 -4.38 0.70 N
12 1 C5 A DG 1004 ? ? C6 A DG 1004 ? ? N1 A DG 1004 ? ? 116.63 111.50 5.13 0.50 N
13 1 C4 A DG 1004 ? ? C5 A DG 1004 ? ? N7 A DG 1004 ? ? 114.82 110.80 4.02 0.40 N
14 1 C5 A DG 1004 ? ? N7 A DG 1004 ? ? C8 A DG 1004 ? ? 100.74 104.30 -3.56 0.50 N
15 1 C5 A DG 1004 ? ? C6 A DG 1004 ? ? O6 A DG 1004 ? ? 122.57 128.60 -6.03 0.60 N
16 1 "O4'" A DG 1005 ? ? "C1'" A DG 1005 ? ? N9 A DG 1005 ? ? 119.87 108.30 11.57 0.30 N
17 1 C6 A DG 1005 ? ? N1 A DG 1005 ? ? C2 A DG 1005 ? ? 120.14 125.10 -4.96 0.60 N
18 1 N3 A DG 1005 ? ? C4 A DG 1005 ? ? C5 A DG 1005 ? ? 125.02 128.60 -3.58 0.50 N
19 1 C5 A DG 1005 ? ? C6 A DG 1005 ? ? N1 A DG 1005 ? ? 115.92 111.50 4.42 0.50 N
20 1 N3 A DG 1005 ? ? C4 A DG 1005 ? ? N9 A DG 1005 ? ? 130.50 126.00 4.50 0.60 N
21 1 C5 A DG 1005 ? ? C6 A DG 1005 ? ? O6 A DG 1005 ? ? 121.17 128.60 -7.43 0.60 N
22 1 "O4'" A DT 1006 ? ? "C1'" A DT 1006 ? ? N1 A DT 1006 ? ? 115.49 108.30 7.19 0.30 N
23 1 C4 A DT 1006 ? ? C5 A DT 1006 ? ? C7 A DT 1006 ? ? 124.59 119.00 5.59 0.60 N
24 1 C6 A DT 1006 ? ? C5 A DT 1006 ? ? C7 A DT 1006 ? ? 119.13 122.90 -3.77 0.60 N
25 1 "O3'" A DT 1006 ? ? P A DT 1007 ? ? OP1 A DT 1007 ? ? 120.06 110.50 9.56 1.10 Y
26 1 "O5'" A DT 1007 ? ? "C5'" A DT 1007 ? ? "C4'" A DT 1007 ? ? 104.14 109.40 -5.26 0.80 N
27 1 "C3'" A DT 1007 ? ? "C2'" A DT 1007 ? ? "C1'" A DT 1007 ? ? 97.18 102.40 -5.22 0.80 N
28 1 "O4'" A DT 1007 ? ? "C1'" A DT 1007 ? ? N1 A DT 1007 ? ? 110.92 108.30 2.62 0.30 N
29 1 C2 A DT 1007 ? ? N3 A DT 1007 ? ? C4 A DT 1007 ? ? 123.57 127.20 -3.63 0.60 N
30 1 C2 A DG 1009 ? ? N3 A DG 1009 ? ? C4 A DG 1009 ? ? 115.49 111.90 3.59 0.50 N
31 1 C4 A DG 1009 ? ? C5 A DG 1009 ? ? C6 A DG 1009 ? ? 114.27 118.80 -4.53 0.60 N
32 1 C5 A DG 1009 ? ? C6 A DG 1009 ? ? N1 A DG 1009 ? ? 115.33 111.50 3.83 0.50 N
33 1 N1 A DG 1009 ? ? C6 A DG 1009 ? ? O6 A DG 1009 ? ? 115.17 119.90 -4.73 0.60 N
34 1 "O4'" A DG 1010 ? ? "C4'" A DG 1010 ? ? "C3'" A DG 1010 ? ? 102.04 104.50 -2.46 0.40 N
35 1 "O4'" A DG 1010 ? ? "C1'" A DG 1010 ? ? N9 A DG 1010 ? ? 101.51 108.00 -6.49 0.70 N
36 1 N9 A DG 1010 ? ? C4 A DG 1010 ? ? C5 A DG 1010 ? ? 102.65 105.40 -2.75 0.40 N
37 1 N1 A DG 1010 ? ? C6 A DG 1010 ? ? O6 A DG 1010 ? ? 114.76 119.90 -5.14 0.60 N
38 1 C5 A DG 1010 ? ? C6 A DG 1010 ? ? O6 A DG 1010 ? ? 132.73 128.60 4.13 0.60 N
39 1 "O5'" A DG 1011 ? ? P A DG 1011 ? ? OP2 A DG 1011 ? ? 99.72 105.70 -5.98 0.90 N
40 1 "O4'" A DG 1011 ? ? "C1'" A DG 1011 ? ? N9 A DG 1011 ? ? 113.74 108.30 5.44 0.30 N
41 1 C5 A DG 1011 ? ? C6 A DG 1011 ? ? N1 A DG 1011 ? ? 108.07 111.50 -3.43 0.50 N
42 1 C5 A DG 1011 ? ? C6 A DG 1011 ? ? O6 A DG 1011 ? ? 133.50 128.60 4.90 0.60 N
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A DT 1001 ? "O5'" ? A DT 1 "O5'"
2 1 Y 1 A DT 1001 ? "C5'" ? A DT 1 "C5'"
3 1 Y 1 A DT 1001 ? "C4'" ? A DT 1 "C4'"
4 1 Y 1 A DT 1001 ? "O4'" ? A DT 1 "O4'"
5 1 Y 1 A DT 1001 ? "C3'" ? A DT 1 "C3'"
6 1 Y 1 A DT 1001 ? "C2'" ? A DT 1 "C2'"
7 1 Y 1 A DT 1001 ? "C1'" ? A DT 1 "C1'"
8 1 Y 1 A DT 1001 ? N1 ? A DT 1 N1
9 1 Y 1 A DT 1001 ? C2 ? A DT 1 C2
10 1 Y 1 A DT 1001 ? O2 ? A DT 1 O2
11 1 Y 1 A DT 1001 ? N3 ? A DT 1 N3
12 1 Y 1 A DT 1001 ? C4 ? A DT 1 C4
13 1 Y 1 A DT 1001 ? O4 ? A DT 1 O4
14 1 Y 1 A DT 1001 ? C5 ? A DT 1 C5
15 1 Y 1 A DT 1001 ? C7 ? A DT 1 C7
16 1 Y 1 A DT 1001 ? C6 ? A DT 1 C6
17 1 Y 1 A DT 1012 ? "C5'" ? A DT 12 "C5'"
18 1 Y 1 A DT 1012 ? "C4'" ? A DT 12 "C4'"
19 1 Y 1 A DT 1012 ? "O4'" ? A DT 12 "O4'"
20 1 Y 1 A DT 1012 ? "C3'" ? A DT 12 "C3'"
21 1 Y 1 A DT 1012 ? "O3'" ? A DT 12 "O3'"
22 1 Y 1 A DT 1012 ? "C2'" ? A DT 12 "C2'"
23 1 Y 1 A DT 1012 ? "C1'" ? A DT 12 "C1'"
24 1 Y 1 A DT 1012 ? N1 ? A DT 12 N1
25 1 Y 1 A DT 1012 ? C2 ? A DT 12 C2
26 1 Y 1 A DT 1012 ? O2 ? A DT 12 O2
27 1 Y 1 A DT 1012 ? N3 ? A DT 12 N3
28 1 Y 1 A DT 1012 ? C4 ? A DT 12 C4
29 1 Y 1 A DT 1012 ? O4 ? A DT 12 O4
30 1 Y 1 A DT 1012 ? C5 ? A DT 12 C5
31 1 Y 1 A DT 1012 ? C7 ? A DT 12 C7
32 1 Y 1 A DT 1012 ? C6 ? A DT 12 C6
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DG OP3 O N N 37
DG P P N N 38
DG OP1 O N N 39
DG OP2 O N N 40
DG "O5'" O N N 41
DG "C5'" C N N 42
DG "C4'" C N R 43
DG "O4'" O N N 44
DG "C3'" C N S 45
DG "O3'" O N N 46
DG "C2'" C N N 47
DG "C1'" C N R 48
DG N9 N Y N 49
DG C8 C Y N 50
DG N7 N Y N 51
DG C5 C Y N 52
DG C6 C N N 53
DG O6 O N N 54
DG N1 N N N 55
DG C2 C N N 56
DG N2 N N N 57
DG N3 N N N 58
DG C4 C Y N 59
DG HOP3 H N N 60
DG HOP2 H N N 61
DG "H5'" H N N 62
DG "H5''" H N N 63
DG "H4'" H N N 64
DG "H3'" H N N 65
DG "HO3'" H N N 66
DG "H2'" H N N 67
DG "H2''" H N N 68
DG "H1'" H N N 69
DG H8 H N N 70
DG H1 H N N 71
DG H21 H N N 72
DG H22 H N N 73
DT OP3 O N N 74
DT P P N N 75
DT OP1 O N N 76
DT OP2 O N N 77
DT "O5'" O N N 78
DT "C5'" C N N 79
DT "C4'" C N R 80
DT "O4'" O N N 81
DT "C3'" C N S 82
DT "O3'" O N N 83
DT "C2'" C N N 84
DT "C1'" C N R 85
DT N1 N N N 86
DT C2 C N N 87
DT O2 O N N 88
DT N3 N N N 89
DT C4 C N N 90
DT O4 O N N 91
DT C5 C N N 92
DT C7 C N N 93
DT C6 C N N 94
DT HOP3 H N N 95
DT HOP2 H N N 96
DT "H5'" H N N 97
DT "H5''" H N N 98
DT "H4'" H N N 99
DT "H3'" H N N 100
DT "HO3'" H N N 101
DT "H2'" H N N 102
DT "H2''" H N N 103
DT "H1'" H N N 104
DT H3 H N N 105
DT H71 H N N 106
DT H72 H N N 107
DT H73 H N N 108
DT H6 H N N 109
HOH O O N N 110
HOH H1 H N N 111
HOH H2 H N N 112
K K K N N 113
NA NA NA N N 114
NII O6 O N N 115
NII C30 C N N 116
NII C29 C N N 117
NII C28 C N N 118
NII N3 N N N 119
NII C9 C Y N 120
NII C8 C Y N 121
NII C7 C Y N 122
NII C14 C N N 123
NII O1 O N N 124
NII N2 N N N 125
NII C18 C N N 126
NII C19 C N N 127
NII C20 C N N 128
NII N5 N N N 129
NII C24 C N N 130
NII C23 C N N 131
NII C13 C N N 132
NII O4 O N N 133
NII C10 C Y N 134
NII C11 C N N 135
NII O2 O N N 136
NII N1 N N N 137
NII C15 C N N 138
NII C16 C N N 139
NII C17 C N N 140
NII N4 N N N 141
NII C21 C N N 142
NII C22 C N N 143
NII C5 C Y N 144
NII C6 C Y N 145
NII C12 C N N 146
NII O3 O N N 147
NII C4 C Y N 148
NII C3 C Y N 149
NII C2 C Y N 150
NII C1 C Y N 151
NII N6 N N N 152
NII C25 C N N 153
NII C26 C N N 154
NII C27 C N N 155
NII O5 O N N 156
NII HO6 H N N 157
NII H30 H N N 158
NII H30A H N N 159
NII H29 H N N 160
NII H29A H N N 161
NII H28 H N N 162
NII H28A H N N 163
NII HN3 H N N 164
NII H8 H N N 165
NII H18 H N N 166
NII H18A H N N 167
NII H19 H N N 168
NII H19A H N N 169
NII H20 H N N 170
NII H20A H N N 171
NII H24 H N N 172
NII H24A H N N 173
NII H24B H N N 174
NII H23 H N N 175
NII H23A H N N 176
NII H23B H N N 177
NII H15 H N N 178
NII H15A H N N 179
NII H16 H N N 180
NII H16A H N N 181
NII H17 H N N 182
NII H17A H N N 183
NII H21 H N N 184
NII H21A H N N 185
NII H21B H N N 186
NII H22 H N N 187
NII H22A H N N 188
NII H22B H N N 189
NII H1 H N N 190
NII HN6 H N N 191
NII H25 H N N 192
NII H25A H N N 193
NII H26 H N N 194
NII H26A H N N 195
NII H27 H N N 196
NII H27A H N N 197
NII HO5 H N N 198
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DG OP3 P sing N N 39
DG OP3 HOP3 sing N N 40
DG P OP1 doub N N 41
DG P OP2 sing N N 42
DG P "O5'" sing N N 43
DG OP2 HOP2 sing N N 44
DG "O5'" "C5'" sing N N 45
DG "C5'" "C4'" sing N N 46
DG "C5'" "H5'" sing N N 47
DG "C5'" "H5''" sing N N 48
DG "C4'" "O4'" sing N N 49
DG "C4'" "C3'" sing N N 50
DG "C4'" "H4'" sing N N 51
DG "O4'" "C1'" sing N N 52
DG "C3'" "O3'" sing N N 53
DG "C3'" "C2'" sing N N 54
DG "C3'" "H3'" sing N N 55
DG "O3'" "HO3'" sing N N 56
DG "C2'" "C1'" sing N N 57
DG "C2'" "H2'" sing N N 58
DG "C2'" "H2''" sing N N 59
DG "C1'" N9 sing N N 60
DG "C1'" "H1'" sing N N 61
DG N9 C8 sing Y N 62
DG N9 C4 sing Y N 63
DG C8 N7 doub Y N 64
DG C8 H8 sing N N 65
DG N7 C5 sing Y N 66
DG C5 C6 sing N N 67
DG C5 C4 doub Y N 68
DG C6 O6 doub N N 69
DG C6 N1 sing N N 70
DG N1 C2 sing N N 71
DG N1 H1 sing N N 72
DG C2 N2 sing N N 73
DG C2 N3 doub N N 74
DG N2 H21 sing N N 75
DG N2 H22 sing N N 76
DG N3 C4 sing N N 77
DT OP3 P sing N N 78
DT OP3 HOP3 sing N N 79
DT P OP1 doub N N 80
DT P OP2 sing N N 81
DT P "O5'" sing N N 82
DT OP2 HOP2 sing N N 83
DT "O5'" "C5'" sing N N 84
DT "C5'" "C4'" sing N N 85
DT "C5'" "H5'" sing N N 86
DT "C5'" "H5''" sing N N 87
DT "C4'" "O4'" sing N N 88
DT "C4'" "C3'" sing N N 89
DT "C4'" "H4'" sing N N 90
DT "O4'" "C1'" sing N N 91
DT "C3'" "O3'" sing N N 92
DT "C3'" "C2'" sing N N 93
DT "C3'" "H3'" sing N N 94
DT "O3'" "HO3'" sing N N 95
DT "C2'" "C1'" sing N N 96
DT "C2'" "H2'" sing N N 97
DT "C2'" "H2''" sing N N 98
DT "C1'" N1 sing N N 99
DT "C1'" "H1'" sing N N 100
DT N1 C2 sing N N 101
DT N1 C6 sing N N 102
DT C2 O2 doub N N 103
DT C2 N3 sing N N 104
DT N3 C4 sing N N 105
DT N3 H3 sing N N 106
DT C4 O4 doub N N 107
DT C4 C5 sing N N 108
DT C5 C7 sing N N 109
DT C5 C6 doub N N 110
DT C7 H71 sing N N 111
DT C7 H72 sing N N 112
DT C7 H73 sing N N 113
DT C6 H6 sing N N 114
HOH O H1 sing N N 115
HOH O H2 sing N N 116
NII O6 C30 sing N N 117
NII C30 C29 sing N N 118
NII C29 C28 sing N N 119
NII C28 N3 sing N N 120
NII N3 C9 sing N N 121
NII C9 C8 sing Y N 122
NII C9 C10 doub Y N 123
NII C8 C7 doub Y N 124
NII C7 C14 sing N N 125
NII C7 C4 sing Y N 126
NII C14 O1 doub N N 127
NII C14 N2 sing N N 128
NII N2 C18 sing N N 129
NII N2 C13 sing N N 130
NII C18 C19 sing N N 131
NII C19 C20 sing N N 132
NII C20 N5 sing N N 133
NII N5 C24 sing N N 134
NII N5 C23 sing N N 135
NII C13 O4 doub N N 136
NII C13 C3 sing N N 137
NII C10 C11 sing N N 138
NII C10 C5 sing Y N 139
NII C11 O2 doub N N 140
NII C11 N1 sing N N 141
NII N1 C15 sing N N 142
NII N1 C12 sing N N 143
NII C15 C16 sing N N 144
NII C16 C17 sing N N 145
NII C17 N4 sing N N 146
NII N4 C21 sing N N 147
NII N4 C22 sing N N 148
NII C5 C6 doub Y N 149
NII C5 C4 sing Y N 150
NII C6 C12 sing N N 151
NII C6 C1 sing Y N 152
NII C12 O3 doub N N 153
NII C4 C3 doub Y N 154
NII C3 C2 sing Y N 155
NII C2 C1 doub Y N 156
NII C2 N6 sing N N 157
NII N6 C25 sing N N 158
NII C25 C26 sing N N 159
NII C26 C27 sing N N 160
NII C27 O5 sing N N 161
NII O6 HO6 sing N N 162
NII C30 H30 sing N N 163
NII C30 H30A sing N N 164
NII C29 H29 sing N N 165
NII C29 H29A sing N N 166
NII C28 H28 sing N N 167
NII C28 H28A sing N N 168
NII N3 HN3 sing N N 169
NII C8 H8 sing N N 170
NII C18 H18 sing N N 171
NII C18 H18A sing N N 172
NII C19 H19 sing N N 173
NII C19 H19A sing N N 174
NII C20 H20 sing N N 175
NII C20 H20A sing N N 176
NII C24 H24 sing N N 177
NII C24 H24A sing N N 178
NII C24 H24B sing N N 179
NII C23 H23 sing N N 180
NII C23 H23A sing N N 181
NII C23 H23B sing N N 182
NII C15 H15 sing N N 183
NII C15 H15A sing N N 184
NII C16 H16 sing N N 185
NII C16 H16A sing N N 186
NII C17 H17 sing N N 187
NII C17 H17A sing N N 188
NII C21 H21 sing N N 189
NII C21 H21A sing N N 190
NII C21 H21B sing N N 191
NII C22 H22 sing N N 192
NII C22 H22A sing N N 193
NII C22 H22B sing N N 194
NII C1 H1 sing N N 195
NII N6 HN6 sing N N 196
NII C25 H25 sing N N 197
NII C25 H25A sing N N 198
NII C26 H26 sing N N 199
NII C26 H26A sing N N 200
NII C27 H27 sing N N 201
NII C27 H27A sing N N 202
NII O5 HO5 sing N N 203
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3CCO 'double helix'
3CCO 'parallel strands'
3CCO 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 3 1_555 A DG 9 1_555 1.522 3.394 -0.550 13.058 -0.300 -92.575 1 A_DG1003:DG1009_A A 1003 ? A 1009 ? 6 ?
1 A DG 4 1_555 A DG 10 1_555 1.855 3.201 -0.199 5.372 -6.757 -91.427 2 A_DG1004:DG1010_A A 1004 ? A 1010 ? 6 ?
1 A DG 5 1_555 A DG 11 1_555 1.688 3.266 -0.280 11.220 -20.117 -91.436 3 A_DG1005:DG1011_A A 1005 ? A 1011 ? 6 ?
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 3 1_555 A DG 9 1_555 A DG 4 1_555 A DG 10 1_555 -0.196 -1.127 3.381 -1.400 1.353 36.516 -1.988 0.114 3.343 2.157 2.232
36.566 1 AA_DG1003DG1004:DG1010DG1009_AA A 1003 ? A 1009 ? A 1004 ? A 1010 ?
1 A DG 4 1_555 A DG 10 1_555 A DG 5 1_555 A DG 11 1_555 -0.329 -0.548 3.032 6.705 8.483 19.112 -4.327 3.147 2.336 23.290 -18.409
21.934 2 AA_DG1004DG1005:DG1011DG1010_AA A 1004 ? A 1010 ? A 1005 ? A 1011 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'SODIUM ION' NA
3 'POTASSIUM ION' K
4 '2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone' NII
5 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1KF1
_pdbx_initial_refinement_model.details 'PDB ENTRY 1KF1'
#