HEADER DNA 11-DEC-07 3BM0
TITLE STRUCTURE OF DNA OCTAMER G(DUSE)G(5-SEDU)ACAC
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 5'-D(*GP*(2'-SE-U)P*GP*(5-SE-U)P*AP*CP*AP*C)-3';
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS SELENIUM MODIFIED DNA/RNA, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR J.JIANG,J.SHENG,A.E.HASSAN,Z.HUANG
REVDAT 4 21-FEB-24 3BM0 1 LINK
REVDAT 3 17-NOV-09 3BM0 1 JRNL
REVDAT 2 24-FEB-09 3BM0 1 VERSN
REVDAT 1 10-JUN-08 3BM0 0
JRNL AUTH A.E.HASSAN,J.SHENG,J.JIANG,W.ZHANG,Z.HUANG
JRNL TITL SYNTHESIS AND CRYSTALLOGRAPHIC ANALYSIS OF 5-SE-THYMIDINE
JRNL TITL 2 DNAS.
JRNL REF ORG.LETT. V. 11 2503 2009
JRNL REFN ISSN 1523-7060
JRNL PMID 19469515
JRNL DOI 10.1021/OL9004867
REMARK 2
REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.76
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 692659.790
REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.3
REMARK 3 NUMBER OF REFLECTIONS : 1922
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING SET) : 0.210
REMARK 3 FREE R VALUE : 0.226
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 98
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.023
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 6
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.90
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 261
REMARK 3 BIN R VALUE (WORKING SET) : 0.2140
REMARK 3 BIN FREE R VALUE : 0.2520
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.00
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 11
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.076
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 163
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 28
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 25.20
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.90
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.92000
REMARK 3 B22 (A**2) : -1.92000
REMARK 3 B33 (A**2) : 3.84000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22
REMARK 3 ESD FROM SIGMAA (A) : 0.13
REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19
REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.009
REMARK 3 BOND ANGLES (DEGREES) : 1.900
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.90
REMARK 3 IMPROPER ANGLES (DEGREES) : 2.310
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : FLAT MODEL
REMARK 3 KSOL : 0.45
REMARK 3 BSOL : 67.29
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM
REMARK 3 PARAMETER FILE 2 : DNA-RNA_UMS.PAR
REMARK 3 PARAMETER FILE 3 : ION.PARAM
REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM
REMARK 3 PARAMETER FILE 5 : NULL
REMARK 3 PARAMETER FILE 6 : NULL
REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP
REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP
REMARK 3 TOPOLOGY FILE 3 : ION.TOP
REMARK 3 TOPOLOGY FILE 4 : WATER.TOP
REMARK 3 TOPOLOGY FILE 5 : UMS.TOP
REMARK 3 TOPOLOGY FILE 6 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED
REMARK 4
REMARK 4 3BM0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-07.
REMARK 100 THE DEPOSITION ID IS D_1000045683.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 28-JUL-07
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : NSLS
REMARK 200 BEAMLINE : X12C
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797, 1.100, 0.9400
REMARK 200 MONOCHROMATOR : GRAPHITE
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2087
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800
REMARK 200 RESOLUTION RANGE LOW (A) : 40.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0
REMARK 200 DATA REDUNDANCY : 9.700
REMARK 200 R MERGE (I) : 0.11200
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : 10.7000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86
REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0
REMARK 200 DATA REDUNDANCY IN SHELL : 8.20
REMARK 200 R MERGE FOR SHELL (I) : 0.44000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : 10.00
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: MAD
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD
REMARK 200 SOFTWARE USED: CNS
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 49.00
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 10% V/V MPD, 40 MM SODIUM CACODYLATE
REMARK 280 (PH 7.0), 12 MM SPERMINE TETRA-HCL, 80 MM SODIUM CHLORIDE.,
REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 11.88600
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.04350
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.04350
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.82900
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.04350
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.04350
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 5.94300
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.04350
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.04350
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 17.82900
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.04350
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.04350
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 5.94300
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 11.88600
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 2910 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 42.08700
REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 42.08700
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 35.65800
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 DC A 6 C5 DC A 6 C6 0.050
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DG A 1 O4' - C1' - N9 ANGL. DEV. = -7.4 DEGREES
REMARK 500 DG A 3 O4' - C1' - N9 ANGL. DEV. = -7.5 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 DG A 3 0.05 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
DBREF 3BM0 A 1 8 PDB 3BM0 3BM0 1 8
SEQRES 1 A 8 DG UMS DG T5S DA DC DA DC
MODRES 3BM0 UMS A 2 DU
MODRES 3BM0 T5S A 4 DT
HET UMS A 2 21
HET T5S A 4 21
HETNAM UMS 2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE
HETNAM T5S 2'-DEOXY-5-(METHYLSELANYL)URIDINE 5'-PHOSPHATE
FORMUL 1 UMS C10 H15 N2 O8 P SE
FORMUL 1 T5S C10 H15 N2 O8 P SE
FORMUL 2 HOH *28(H2 O)
LINK O3' DG A 1 P UMS A 2 1555 1555 1.61
LINK O3' UMS A 2 P DG A 3 1555 1555 1.62
LINK O3' DG A 3 P T5S A 4 1555 1555 1.60
LINK O3' T5S A 4 P DA A 5 1555 1555 1.61
CRYST1 42.087 42.087 23.772 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.023760 0.000000 0.000000 0.00000
SCALE2 0.000000 0.023760 0.000000 0.00000
SCALE3 0.000000 0.000000 0.042066 0.00000
ATOM 1 O5' DG A 1 28.298 22.918 22.978 1.00 30.20 O
ATOM 2 C5' DG A 1 28.212 24.343 22.951 1.00 29.61 C
ATOM 3 C4' DG A 1 29.332 24.933 22.128 1.00 28.90 C
ATOM 4 O4' DG A 1 30.560 24.760 22.885 1.00 29.58 O
ATOM 5 C3' DG A 1 29.582 24.184 20.820 1.00 29.87 C
ATOM 6 O3' DG A 1 29.043 24.776 19.645 1.00 28.95 O
ATOM 7 C2' DG A 1 31.088 24.245 20.632 1.00 29.58 C
ATOM 8 C1' DG A 1 31.665 24.541 21.999 1.00 28.30 C
ATOM 9 N9 DG A 1 32.105 23.214 22.441 1.00 29.89 N
ATOM 10 C8 DG A 1 31.397 22.246 23.126 1.00 29.66 C
ATOM 11 N7 DG A 1 32.061 21.127 23.275 1.00 30.07 N
ATOM 12 C5 DG A 1 33.287 21.376 22.663 1.00 29.60 C
ATOM 13 C6 DG A 1 34.452 20.518 22.490 1.00 27.57 C
ATOM 14 O6 DG A 1 34.603 19.349 22.856 1.00 29.19 O
ATOM 15 N1 DG A 1 35.480 21.183 21.818 1.00 30.78 N
ATOM 16 C2 DG A 1 35.415 22.489 21.365 1.00 31.51 C
ATOM 17 N2 DG A 1 36.526 22.977 20.763 1.00 32.55 N
ATOM 18 N3 DG A 1 34.346 23.273 21.500 1.00 30.21 N
ATOM 19 C4 DG A 1 33.335 22.659 22.158 1.00 28.97 C
HETATM 20 P UMS A 2 28.543 23.811 18.457 1.00 30.16 P
HETATM 21 OP1 UMS A 2 27.661 24.615 17.578 1.00 32.40 O
HETATM 22 OP2 UMS A 2 28.084 22.513 18.992 1.00 28.14 O
HETATM 23 O5' UMS A 2 29.854 23.514 17.609 1.00 31.11 O
HETATM 24 C5' UMS A 2 30.597 24.591 17.082 1.00 31.57 C
HETATM 25 C4' UMS A 2 31.939 24.130 16.571 1.00 33.52 C
HETATM 26 O4' UMS A 2 32.782 23.776 17.702 1.00 33.12 O
HETATM 27 C3' UMS A 2 31.921 22.857 15.736 1.00 34.66 C
HETATM 28 O3' UMS A 2 31.697 23.033 14.356 1.00 36.19 O
HETATM 29 C2' UMS A 2 33.348 22.353 15.887 1.00 34.34 C
HETATM 30 SE2' UMS A 2 34.672 23.595 14.780 1.00 37.64 SE
HETATM 31 C1' UMS A 2 33.719 22.770 17.289 1.00 33.67 C
HETATM 32 CA' UMS A 2 36.362 22.790 15.358 1.00 37.53 C
HETATM 33 N1 UMS A 2 33.370 21.622 18.209 1.00 32.45 N
HETATM 34 C2 UMS A 2 34.379 20.677 18.408 1.00 31.10 C
HETATM 35 O2 UMS A 2 35.475 20.769 17.883 1.00 34.98 O
HETATM 36 N3 UMS A 2 34.062 19.618 19.235 1.00 31.07 N
HETATM 37 C4 UMS A 2 32.865 19.386 19.878 1.00 29.86 C
HETATM 38 O4 UMS A 2 32.731 18.397 20.573 1.00 30.56 O
HETATM 39 C5 UMS A 2 31.805 20.421 19.639 1.00 29.64 C
HETATM 40 C6 UMS A 2 32.133 21.486 18.809 1.00 32.39 C
ATOM 41 P DG A 3 30.869 21.891 13.563 1.00 39.06 P
ATOM 42 OP1 DG A 3 30.398 22.503 12.306 1.00 37.25 O
ATOM 43 OP2 DG A 3 29.897 21.244 14.503 1.00 39.39 O
ATOM 44 O5' DG A 3 31.936 20.757 13.261 1.00 38.54 O
ATOM 45 C5' DG A 3 33.131 21.081 12.608 1.00 38.69 C
ATOM 46 C4' DG A 3 34.125 19.959 12.755 1.00 38.11 C
ATOM 47 O4' DG A 3 34.403 19.760 14.167 1.00 37.76 O
ATOM 48 C3' DG A 3 33.630 18.602 12.255 1.00 37.62 C
ATOM 49 O3' DG A 3 34.237 18.207 11.038 1.00 35.86 O
ATOM 50 C2' DG A 3 34.208 17.611 13.253 1.00 37.34 C
ATOM 51 C1' DG A 3 34.899 18.439 14.323 1.00 36.34 C
ATOM 52 N9 DG A 3 34.193 18.031 15.539 1.00 34.22 N
ATOM 53 C8 DG A 3 33.008 18.503 16.065 1.00 33.54 C
ATOM 54 N7 DG A 3 32.593 17.806 17.092 1.00 32.72 N
ATOM 55 C5 DG A 3 33.576 16.845 17.275 1.00 31.40 C
ATOM 56 C6 DG A 3 33.677 15.751 18.241 1.00 29.81 C
ATOM 57 O6 DG A 3 32.872 15.420 19.108 1.00 30.01 O
ATOM 58 N1 DG A 3 34.851 15.022 18.061 1.00 30.02 N
ATOM 59 C2 DG A 3 35.785 15.263 17.077 1.00 31.14 C
ATOM 60 N2 DG A 3 36.829 14.424 17.044 1.00 31.19 N
ATOM 61 N3 DG A 3 35.697 16.246 16.189 1.00 30.79 N
ATOM 62 C4 DG A 3 34.583 16.987 16.347 1.00 31.63 C
HETATM 63 P T5S A 4 33.712 16.885 10.297 1.00 36.60 P
HETATM 64 OP1 T5S A 4 34.179 17.003 8.883 1.00 36.09 O
HETATM 65 OP2 T5S A 4 32.288 16.654 10.574 1.00 32.20 O
HETATM 66 O5' T5S A 4 34.517 15.736 11.042 1.00 34.45 O
HETATM 67 N1 T5S A 4 34.928 13.162 14.236 1.00 30.90 N
HETATM 68 C6 T5S A 4 34.010 14.180 14.023 1.00 31.59 C
HETATM 69 C2 T5S A 4 34.791 12.282 15.304 1.00 29.43 C
HETATM 70 O2 T5S A 4 35.604 11.416 15.548 1.00 27.89 O
HETATM 71 N3 T5S A 4 33.654 12.457 16.082 1.00 30.23 N
HETATM 72 C4 T5S A 4 32.654 13.415 15.915 1.00 29.74 C
HETATM 73 O4 T5S A 4 31.672 13.451 16.662 1.00 25.79 O
HETATM 74 C5 T5S A 4 32.867 14.348 14.796 1.00 28.44 C
HETATM 75 SE T5S A 4 31.533 15.697 14.482 1.00 34.72 SE
HETATM 76 CH3 T5S A 4 31.105 15.706 13.079 1.00 46.62 C
HETATM 77 C2' T5S A 4 35.373 12.278 12.088 1.00 34.62 C
HETATM 78 C5' T5S A 4 35.935 15.719 11.031 1.00 35.63 C
HETATM 79 C4' T5S A 4 36.432 14.356 11.445 1.00 34.73 C
HETATM 80 O4' T5S A 4 36.351 14.271 12.891 1.00 34.39 O
HETATM 81 C1' T5S A 4 36.059 12.926 13.276 1.00 32.69 C
HETATM 82 C3' T5S A 4 35.522 13.243 10.927 1.00 34.40 C
HETATM 83 O3' T5S A 4 36.048 12.474 9.867 1.00 34.05 O
ATOM 84 P DA A 5 35.098 11.398 9.147 1.00 34.27 P
ATOM 85 OP1 DA A 5 35.546 11.312 7.724 1.00 35.44 O
ATOM 86 OP2 DA A 5 33.675 11.678 9.446 1.00 35.26 O
ATOM 87 O5' DA A 5 35.504 10.077 9.917 1.00 33.78 O
ATOM 88 C5' DA A 5 34.535 9.146 10.343 1.00 33.50 C
ATOM 89 C4' DA A 5 35.181 8.208 11.331 1.00 31.82 C
ATOM 90 O4' DA A 5 35.343 8.956 12.567 1.00 30.95 O
ATOM 91 C3' DA A 5 34.301 7.016 11.669 1.00 31.77 C
ATOM 92 O3' DA A 5 34.746 5.808 11.064 1.00 32.84 O
ATOM 93 C2' DA A 5 34.369 6.874 13.179 1.00 30.72 C
ATOM 94 C1' DA A 5 34.790 8.249 13.675 1.00 29.88 C
ATOM 95 N9 DA A 5 33.595 8.979 14.112 1.00 27.75 N
ATOM 96 C8 DA A 5 32.958 10.032 13.501 1.00 27.89 C
ATOM 97 N7 DA A 5 31.904 10.452 14.143 1.00 25.82 N
ATOM 98 C5 DA A 5 31.846 9.635 15.262 1.00 25.61 C
ATOM 99 C6 DA A 5 30.972 9.604 16.364 1.00 27.29 C
ATOM 100 N6 DA A 5 29.970 10.469 16.537 1.00 26.98 N
ATOM 101 N1 DA A 5 31.185 8.649 17.306 1.00 25.22 N
ATOM 102 C2 DA A 5 32.212 7.807 17.131 1.00 24.39 C
ATOM 103 N3 DA A 5 33.105 7.756 16.137 1.00 25.47 N
ATOM 104 C4 DA A 5 32.865 8.711 15.242 1.00 25.33 C
ATOM 105 P DC A 6 33.636 4.815 10.479 1.00 32.83 P
ATOM 106 OP1 DC A 6 34.354 3.763 9.722 1.00 33.52 O
ATOM 107 OP2 DC A 6 32.540 5.595 9.857 1.00 30.90 O
ATOM 108 O5' DC A 6 33.037 4.172 11.792 1.00 29.94 O
ATOM 109 C5' DC A 6 33.921 3.504 12.676 1.00 31.78 C
ATOM 110 C4' DC A 6 33.189 3.006 13.895 1.00 31.54 C
ATOM 111 O4' DC A 6 33.018 4.139 14.781 1.00 31.47 O
ATOM 112 C3' DC A 6 31.783 2.500 13.617 1.00 32.03 C
ATOM 113 O3' DC A 6 31.653 1.098 13.427 1.00 33.54 O
ATOM 114 C2' DC A 6 31.005 2.869 14.868 1.00 31.05 C
ATOM 115 C1' DC A 6 31.768 4.058 15.457 1.00 30.29 C
ATOM 116 N1 DC A 6 30.958 5.247 15.094 1.00 28.47 N
ATOM 117 C2 DC A 6 29.943 5.661 15.987 1.00 26.89 C
ATOM 118 O2 DC A 6 29.805 5.043 17.063 1.00 26.63 O
ATOM 119 N3 DC A 6 29.142 6.697 15.663 1.00 26.02 N
ATOM 120 C4 DC A 6 29.300 7.352 14.509 1.00 27.09 C
ATOM 121 N4 DC A 6 28.470 8.383 14.268 1.00 27.65 N
ATOM 122 C5 DC A 6 30.320 6.986 13.562 1.00 25.62 C
ATOM 123 C6 DC A 6 31.142 5.919 13.902 1.00 28.11 C
ATOM 124 P DA A 7 30.402 0.559 12.559 1.00 35.50 P
ATOM 125 OP1 DA A 7 30.728 -0.808 12.053 1.00 36.64 O
ATOM 126 OP2 DA A 7 29.935 1.597 11.596 1.00 35.64 O
ATOM 127 O5' DA A 7 29.273 0.441 13.660 1.00 33.18 O
ATOM 128 C5' DA A 7 29.552 -0.201 14.891 1.00 33.31 C
ATOM 129 C4' DA A 7 28.302 -0.263 15.730 1.00 32.74 C
ATOM 130 O4' DA A 7 28.136 1.022 16.360 1.00 31.76 O
ATOM 131 C3' DA A 7 27.049 -0.489 14.897 1.00 33.56 C
ATOM 132 O3' DA A 7 26.526 -1.789 15.014 1.00 37.04 O
ATOM 133 C2' DA A 7 26.004 0.447 15.483 1.00 32.34 C
ATOM 134 C1' DA A 7 26.780 1.443 16.332 1.00 30.77 C
ATOM 135 N9 DA A 7 26.741 2.741 15.655 1.00 28.14 N
ATOM 136 C8 DA A 7 27.509 3.202 14.608 1.00 29.36 C
ATOM 137 N7 DA A 7 27.168 4.401 14.196 1.00 26.77 N
ATOM 138 C5 DA A 7 26.133 4.763 15.047 1.00 25.79 C
ATOM 139 C6 DA A 7 25.352 5.938 15.153 1.00 26.96 C
ATOM 140 N6 DA A 7 25.517 7.020 14.381 1.00 26.08 N
ATOM 141 N1 DA A 7 24.384 5.961 16.093 1.00 25.51 N
ATOM 142 C2 DA A 7 24.233 4.886 16.881 1.00 29.30 C
ATOM 143 N3 DA A 7 24.917 3.739 16.891 1.00 28.22 N
ATOM 144 C4 DA A 7 25.858 3.746 15.940 1.00 26.73 C
ATOM 145 P DC A 8 25.550 -2.333 13.861 1.00 39.20 P
ATOM 146 OP1 DC A 8 25.577 -3.806 14.066 1.00 40.30 O
ATOM 147 OP2 DC A 8 25.901 -1.771 12.516 1.00 40.03 O
ATOM 148 O5' DC A 8 24.118 -1.753 14.276 1.00 37.21 O
ATOM 149 C5' DC A 8 23.480 -2.219 15.471 1.00 37.48 C
ATOM 150 C4' DC A 8 22.140 -1.550 15.677 1.00 36.90 C
ATOM 151 O4' DC A 8 22.325 -0.119 15.799 1.00 35.77 O
ATOM 152 C3' DC A 8 21.106 -1.757 14.564 1.00 37.30 C
ATOM 153 O3' DC A 8 19.790 -1.717 15.100 1.00 39.47 O
ATOM 154 C2' DC A 8 21.193 -0.469 13.772 1.00 36.47 C
ATOM 155 C1' DC A 8 21.496 0.546 14.864 1.00 35.79 C
ATOM 156 N1 DC A 8 22.243 1.683 14.294 1.00 34.65 N
ATOM 157 C2 DC A 8 21.719 2.989 14.458 1.00 34.91 C
ATOM 158 O2 DC A 8 20.727 3.151 15.179 1.00 34.72 O
ATOM 159 N3 DC A 8 22.314 4.033 13.838 1.00 33.84 N
ATOM 160 C4 DC A 8 23.413 3.841 13.088 1.00 35.09 C
ATOM 161 N4 DC A 8 23.927 4.901 12.437 1.00 32.54 N
ATOM 162 C5 DC A 8 24.021 2.556 12.955 1.00 34.69 C
ATOM 163 C6 DC A 8 23.396 1.491 13.586 1.00 34.58 C
TER 164 DC A 8
HETATM 165 O HOH A 9 31.144 16.519 20.366 1.00 31.66 O
HETATM 166 O HOH A 10 30.073 17.519 18.369 1.00 32.71 O
HETATM 167 O HOH A 11 23.549 1.651 18.172 1.00 42.07 O
HETATM 168 O HOH A 12 27.764 22.384 25.466 1.00 36.09 O
HETATM 169 O HOH A 13 35.526 6.179 16.563 1.00 23.83 O
HETATM 170 O HOH A 14 25.086 26.562 21.006 1.00 34.12 O
HETATM 171 O HOH A 15 29.831 14.137 20.591 1.00 39.66 O
HETATM 172 O HOH A 16 37.730 16.969 14.645 1.00 50.47 O
HETATM 173 O HOH A 17 39.265 20.607 13.279 1.00 46.22 O
HETATM 174 O HOH A 18 25.364 25.629 18.616 1.00 40.09 O
HETATM 175 O HOH A 19 20.534 3.774 17.874 1.00 42.04 O
HETATM 176 O HOH A 20 29.868 18.181 21.851 1.00 43.47 O
HETATM 177 O HOH A 21 29.540 10.906 12.802 1.00 44.80 O
HETATM 178 O HOH A 22 30.677 19.004 24.115 1.00 44.01 O
HETATM 179 O HOH A 23 25.308 -4.909 16.458 1.00 37.60 O
HETATM 180 O HOH A 24 27.633 5.497 11.787 1.00 38.59 O
HETATM 181 O HOH A 25 27.218 24.988 15.160 1.00 49.28 O
HETATM 182 O HOH A 26 34.837 18.671 6.715 1.00 46.01 O
HETATM 183 O HOH A 27 32.416 15.997 22.487 1.00 54.10 O
HETATM 184 O HOH A 28 25.991 -0.113 10.492 1.00 48.51 O
HETATM 185 O HOH A 29 32.957 17.699 24.176 1.00 41.17 O
HETATM 186 O HOH A 30 29.380 14.900 17.450 1.00 37.45 O
HETATM 187 O HOH A 31 34.529 16.447 25.836 1.00 51.03 O
HETATM 188 O HOH A 32 38.806 19.564 15.412 1.00 51.35 O
HETATM 189 O HOH A 33 35.220 19.396 8.932 1.00 56.05 O
HETATM 190 O HOH A 34 27.232 2.139 10.976 1.00 55.45 O
HETATM 191 O HOH A 35 18.579 -3.951 14.026 1.00 53.18 O
HETATM 192 O HOH A 36 26.716 22.376 15.249 1.00 62.30 O
CONECT 6 20
CONECT 20 6 21 22 23
CONECT 21 20
CONECT 22 20
CONECT 23 20 24
CONECT 24 23 25
CONECT 25 24 26 27
CONECT 26 25 31
CONECT 27 25 28 29
CONECT 28 27 41
CONECT 29 27 30 31
CONECT 30 29 32
CONECT 31 26 29 33
CONECT 32 30
CONECT 33 31 34 40
CONECT 34 33 35 36
CONECT 35 34
CONECT 36 34 37
CONECT 37 36 38 39
CONECT 38 37
CONECT 39 37 40
CONECT 40 33 39
CONECT 41 28
CONECT 49 63
CONECT 63 49 64 65 66
CONECT 64 63
CONECT 65 63
CONECT 66 63 78
CONECT 67 68 69 81
CONECT 68 67 74
CONECT 69 67 70 71
CONECT 70 69
CONECT 71 69 72
CONECT 72 71 73 74
CONECT 73 72
CONECT 74 68 72 75
CONECT 75 74 76
CONECT 76 75
CONECT 77 81 82
CONECT 78 66 79
CONECT 79 78 80 82
CONECT 80 79 81
CONECT 81 67 77 80
CONECT 82 77 79 83
CONECT 83 82 84
CONECT 84 83
MASTER 298 0 2 0 0 0 0 6 191 1 46 1
END