data_386D
#
_entry.id 386D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 386D pdb_0000386d 10.2210/pdb386d/pdb
RCSB DDF079 ? ?
WWPDB D_1000178851 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1998-03-12
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2024-02-21
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Atomic model'
4 4 'Structure model' 'Data collection'
5 4 'Structure model' 'Database references'
6 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' chem_comp_atom
3 4 'Structure model' chem_comp_bond
4 4 'Structure model' database_2
5 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.occupancy'
2 4 'Structure model' '_database_2.pdbx_DOI'
3 4 'Structure model' '_database_2.pdbx_database_accession'
4 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
5 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
6 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 386D
_pdbx_database_status.recvd_initial_deposition_date 1998-03-11
_pdbx_database_status.deposit_site NDB
_pdbx_database_status.process_site NDB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Gasper, S.M.' 1
'Armitage, B.' 2
'Shui, X.' 3
'Hu, G.G.' 4
'Yu, C.' 5
'Schuster, G.' 6
'Williams, L.D.' 7
#
_citation.id primary
_citation.title 'Three-Dimensional Structure and Reactivity of a Photochemical Cleavage Agent Bound to DNA'
_citation.journal_abbrev J.Am.Chem.Soc.
_citation.journal_volume 120
_citation.page_first 12402
_citation.page_last 12409
_citation.year 1998
_citation.journal_id_ASTM JACSAT
_citation.country US
_citation.journal_id_ISSN 0002-7863
_citation.journal_id_CSD 0004
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed -1
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Gasper, S.M.' 1 ?
primary 'Armitage, B.' 2 ?
primary 'Shui, X.' 3 ?
primary 'Hu, G.G.' 4 ?
primary 'Yu, C.' 5 ?
primary 'Schuster, G.' 6 ?
primary 'Williams, L.D.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man
;DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
;
1809.217 1 ? ? ? ?
2 non-polymer syn 'N,N-BIS(3-AMINOPROPYL)-2-ANTHRAQUINONESULFONAMIDE' 403.495 1 ? ? ? ?
3 water nat water 18.015 22 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGTACG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'N,N-BIS(3-AMINOPROPYL)-2-ANTHRAQUINONESULFONAMIDE' AQS
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DT n
1 4 DA n
1 5 DC n
1 6 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
AQS non-polymer . 'N,N-BIS(3-AMINOPROPYL)-2-ANTHRAQUINONESULFONAMIDE' ? 'C20 H25 N3 O4 S 2' 403.495
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DT 3 3 3 DT T A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DG 6 6 6 DG G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AQS 1 7 7 AQS AQS A .
C 3 HOH 1 21 21 HOH HOH A .
C 3 HOH 2 22 22 HOH HOH A .
C 3 HOH 3 23 23 HOH HOH A .
C 3 HOH 4 24 24 HOH HOH A .
C 3 HOH 5 25 25 HOH HOH A .
C 3 HOH 6 26 26 HOH HOH A .
C 3 HOH 7 27 27 HOH HOH A .
C 3 HOH 8 28 28 HOH HOH A .
C 3 HOH 9 29 29 HOH HOH A .
C 3 HOH 10 30 30 HOH HOH A .
C 3 HOH 11 31 31 HOH HOH A .
C 3 HOH 12 32 32 HOH HOH A .
C 3 HOH 13 33 33 HOH HOH A .
C 3 HOH 14 34 34 HOH HOH A .
C 3 HOH 15 35 35 HOH HOH A .
C 3 HOH 16 36 36 HOH HOH A .
C 3 HOH 17 37 37 HOH HOH A .
C 3 HOH 18 38 38 HOH HOH A .
C 3 HOH 19 39 39 HOH HOH A .
C 3 HOH 20 40 40 HOH HOH A .
C 3 HOH 21 41 41 HOH HOH A .
C 3 HOH 22 42 42 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
MAD 'model building' . ? 1
X-PLOR refinement 3.1 ? 2
ADSC 'data collection' . ? 3
MAD phasing . ? 4
#
_cell.entry_id 386D
_cell.length_a 31.020
_cell.length_b 31.020
_cell.length_c 64.910
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 386D
_symmetry.space_group_name_H-M 'P 65 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 179
#
_exptl.entry_id 386D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.49
_exptl_crystal.density_percent_sol 50.63
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.50
_exptl_crystal_grow.pdbx_details 'pH 6.50, VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 'NA CACODYLATE' ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 MPD ? ? ?
1 5 1 SPERMINE_HCL ? ? ?
1 6 2 WATER ? ? ?
1 7 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 136.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'AREA DETECTOR'
_diffrn_detector.type SDMS
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator GRAPHITE
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 386D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low ?
_reflns.d_resolution_high ?
_reflns.number_obs ?
_reflns.number_all ?
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs 0.0770000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 12.44
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.800
_reflns_shell.d_res_low 1.880
_reflns_shell.percent_possible_all 65.60
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 386D
_refine.ls_number_reflns_obs 1680
_refine.ls_number_reflns_all 1972
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 5.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 10.000
_refine.ls_d_res_high 1.800
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.1960000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.1960000
_refine.ls_R_factor_R_free 0.2680000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 120
_refine_hist.pdbx_number_atoms_ligand 28
_refine_hist.number_atoms_solvent 22
_refine_hist.number_atoms_total 170
_refine_hist.d_res_high 1.800
_refine_hist.d_res_low 10.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 3.02 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 386D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 386D
_struct.title 'THREE-DIMENSIONAL STRUCTURE AND REACTIVITY OF A PHOTOCHEMICAL CLEAVAGE AGENT BOUND TO DNA'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 386D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 386D
_struct_ref.pdbx_db_accession 386D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 386D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 386D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 31.0200000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 32.4550000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 1 A DG 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 1 A DG 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 1 A DG 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 3 A DA 4 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 3 A DA 4 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 3 N3 ? ? A DA 4 A DT 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 3 O4 ? ? A DA 4 A DT 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 6 A DC 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 6 A DC 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 6 A DC 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A AQS 7 ? 9 'BINDING SITE FOR RESIDUE AQS A 7'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 9 DC A 1 ? DC A 1 . ? 1_555 ?
2 AC1 9 DC A 1 ? DC A 1 . ? 12_555 ?
3 AC1 9 DG A 2 ? DG A 2 . ? 1_555 ?
4 AC1 9 DA A 4 ? DA A 4 . ? 5_555 ?
5 AC1 9 DC A 5 ? DC A 5 . ? 11_655 ?
6 AC1 9 DG A 6 ? DG A 6 . ? 5_565 ?
7 AC1 9 DG A 6 ? DG A 6 . ? 3_665 ?
8 AC1 9 DG A 6 ? DG A 6 . ? 11_655 ?
9 AC1 9 HOH C . ? HOH A 36 . ? 1_555 ?
#
_pdbx_validate_rmsd_bond.id 1
_pdbx_validate_rmsd_bond.PDB_model_num 1
_pdbx_validate_rmsd_bond.auth_atom_id_1 "C5'"
_pdbx_validate_rmsd_bond.auth_asym_id_1 A
_pdbx_validate_rmsd_bond.auth_comp_id_1 DC
_pdbx_validate_rmsd_bond.auth_seq_id_1 1
_pdbx_validate_rmsd_bond.PDB_ins_code_1 ?
_pdbx_validate_rmsd_bond.label_alt_id_1 ?
_pdbx_validate_rmsd_bond.auth_atom_id_2 "C4'"
_pdbx_validate_rmsd_bond.auth_asym_id_2 A
_pdbx_validate_rmsd_bond.auth_comp_id_2 DC
_pdbx_validate_rmsd_bond.auth_seq_id_2 1
_pdbx_validate_rmsd_bond.PDB_ins_code_2 ?
_pdbx_validate_rmsd_bond.label_alt_id_2 ?
_pdbx_validate_rmsd_bond.bond_value 1.559
_pdbx_validate_rmsd_bond.bond_target_value 1.512
_pdbx_validate_rmsd_bond.bond_deviation 0.047
_pdbx_validate_rmsd_bond.bond_standard_deviation 0.007
_pdbx_validate_rmsd_bond.linker_flag N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.70 108.30 3.40 0.30 N
2 1 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.18 118.90 4.28 0.60 N
3 1 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 111.25 106.00 5.25 0.60 N
4 1 "C1'" A DG 2 ? ? "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? 102.57 110.10 -7.53 1.00 N
5 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DT 3 ? ? 126.94 119.70 7.24 1.20 Y
6 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 101.90 108.00 -6.10 0.70 N
7 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.48 108.30 3.18 0.30 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A HOH 21 ? C HOH .
2 1 A HOH 22 ? C HOH .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
AQS C1 C Y N 1
AQS C2 C Y N 2
AQS C3 C Y N 3
AQS C4 C Y N 4
AQS C5 C Y N 5
AQS C6 C N N 6
AQS O6 O N N 7
AQS C7 C Y N 8
AQS C8 C Y N 9
AQS C9 C Y N 10
AQS C16 C Y N 11
AQS C17 C Y N 12
AQS C18 C Y N 13
AQS C19 C N N 14
AQS O19 O N N 15
AQS C20 C Y N 16
AQS S1 S N N 17
AQS O1S O N N 18
AQS O2S O N N 19
AQS N1 N N N 20
AQS C1A C N N 21
AQS C2A C N N 22
AQS C3A C N N 23
AQS N3A N N N 24
AQS C1B C N N 25
AQS C2B C N N 26
AQS C3B C N N 27
AQS N3B N N N 28
AQS H1 H N N 29
AQS H2 H N N 30
AQS H4 H N N 31
AQS H8 H N N 32
AQS H9 H N N 33
AQS H16 H N N 34
AQS H17 H N N 35
AQS HA11 H N N 36
AQS HA12 H N N 37
AQS HA21 H N N 38
AQS HA22 H N N 39
AQS HA31 H N N 40
AQS HA32 H N N 41
AQS HNA1 H N N 42
AQS HNA2 H N N 43
AQS HNA3 H N N 44
AQS HB11 H N N 45
AQS HB12 H N N 46
AQS HB21 H N N 47
AQS HB22 H N N 48
AQS HB31 H N N 49
AQS HB32 H N N 50
AQS HNB1 H N N 51
AQS HNB2 H N N 52
AQS HNB3 H N N 53
DA OP3 O N N 54
DA P P N N 55
DA OP1 O N N 56
DA OP2 O N N 57
DA "O5'" O N N 58
DA "C5'" C N N 59
DA "C4'" C N R 60
DA "O4'" O N N 61
DA "C3'" C N S 62
DA "O3'" O N N 63
DA "C2'" C N N 64
DA "C1'" C N R 65
DA N9 N Y N 66
DA C8 C Y N 67
DA N7 N Y N 68
DA C5 C Y N 69
DA C6 C Y N 70
DA N6 N N N 71
DA N1 N Y N 72
DA C2 C Y N 73
DA N3 N Y N 74
DA C4 C Y N 75
DA HOP3 H N N 76
DA HOP2 H N N 77
DA "H5'" H N N 78
DA "H5''" H N N 79
DA "H4'" H N N 80
DA "H3'" H N N 81
DA "HO3'" H N N 82
DA "H2'" H N N 83
DA "H2''" H N N 84
DA "H1'" H N N 85
DA H8 H N N 86
DA H61 H N N 87
DA H62 H N N 88
DA H2 H N N 89
DC OP3 O N N 90
DC P P N N 91
DC OP1 O N N 92
DC OP2 O N N 93
DC "O5'" O N N 94
DC "C5'" C N N 95
DC "C4'" C N R 96
DC "O4'" O N N 97
DC "C3'" C N S 98
DC "O3'" O N N 99
DC "C2'" C N N 100
DC "C1'" C N R 101
DC N1 N N N 102
DC C2 C N N 103
DC O2 O N N 104
DC N3 N N N 105
DC C4 C N N 106
DC N4 N N N 107
DC C5 C N N 108
DC C6 C N N 109
DC HOP3 H N N 110
DC HOP2 H N N 111
DC "H5'" H N N 112
DC "H5''" H N N 113
DC "H4'" H N N 114
DC "H3'" H N N 115
DC "HO3'" H N N 116
DC "H2'" H N N 117
DC "H2''" H N N 118
DC "H1'" H N N 119
DC H41 H N N 120
DC H42 H N N 121
DC H5 H N N 122
DC H6 H N N 123
DG OP3 O N N 124
DG P P N N 125
DG OP1 O N N 126
DG OP2 O N N 127
DG "O5'" O N N 128
DG "C5'" C N N 129
DG "C4'" C N R 130
DG "O4'" O N N 131
DG "C3'" C N S 132
DG "O3'" O N N 133
DG "C2'" C N N 134
DG "C1'" C N R 135
DG N9 N Y N 136
DG C8 C Y N 137
DG N7 N Y N 138
DG C5 C Y N 139
DG C6 C N N 140
DG O6 O N N 141
DG N1 N N N 142
DG C2 C N N 143
DG N2 N N N 144
DG N3 N N N 145
DG C4 C Y N 146
DG HOP3 H N N 147
DG HOP2 H N N 148
DG "H5'" H N N 149
DG "H5''" H N N 150
DG "H4'" H N N 151
DG "H3'" H N N 152
DG "HO3'" H N N 153
DG "H2'" H N N 154
DG "H2''" H N N 155
DG "H1'" H N N 156
DG H8 H N N 157
DG H1 H N N 158
DG H21 H N N 159
DG H22 H N N 160
DT OP3 O N N 161
DT P P N N 162
DT OP1 O N N 163
DT OP2 O N N 164
DT "O5'" O N N 165
DT "C5'" C N N 166
DT "C4'" C N R 167
DT "O4'" O N N 168
DT "C3'" C N S 169
DT "O3'" O N N 170
DT "C2'" C N N 171
DT "C1'" C N R 172
DT N1 N N N 173
DT C2 C N N 174
DT O2 O N N 175
DT N3 N N N 176
DT C4 C N N 177
DT O4 O N N 178
DT C5 C N N 179
DT C7 C N N 180
DT C6 C N N 181
DT HOP3 H N N 182
DT HOP2 H N N 183
DT "H5'" H N N 184
DT "H5''" H N N 185
DT "H4'" H N N 186
DT "H3'" H N N 187
DT "HO3'" H N N 188
DT "H2'" H N N 189
DT "H2''" H N N 190
DT "H1'" H N N 191
DT H3 H N N 192
DT H71 H N N 193
DT H72 H N N 194
DT H73 H N N 195
DT H6 H N N 196
HOH O O N N 197
HOH H1 H N N 198
HOH H2 H N N 199
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AQS C1 C2 doub Y N 1
AQS C1 C20 sing Y N 2
AQS C1 H1 sing N N 3
AQS C2 C3 sing Y N 4
AQS C2 H2 sing N N 5
AQS C3 C4 doub Y N 6
AQS C3 S1 sing N N 7
AQS C4 C5 sing Y N 8
AQS C4 H4 sing N N 9
AQS C5 C6 sing N N 10
AQS C5 C20 doub Y N 11
AQS C6 O6 doub N N 12
AQS C6 C7 sing N N 13
AQS C7 C8 doub Y N 14
AQS C7 C18 sing Y N 15
AQS C8 C9 sing Y N 16
AQS C8 H8 sing N N 17
AQS C9 C16 doub Y N 18
AQS C9 H9 sing N N 19
AQS C16 C17 sing Y N 20
AQS C16 H16 sing N N 21
AQS C17 C18 doub Y N 22
AQS C17 H17 sing N N 23
AQS C18 C19 sing N N 24
AQS C19 O19 doub N N 25
AQS C19 C20 sing N N 26
AQS S1 O1S doub N N 27
AQS S1 O2S doub N N 28
AQS S1 N1 sing N N 29
AQS N1 C1A sing N N 30
AQS N1 C1B sing N N 31
AQS C1A C2A sing N N 32
AQS C1A HA11 sing N N 33
AQS C1A HA12 sing N N 34
AQS C2A C3A sing N N 35
AQS C2A HA21 sing N N 36
AQS C2A HA22 sing N N 37
AQS C3A N3A sing N N 38
AQS C3A HA31 sing N N 39
AQS C3A HA32 sing N N 40
AQS N3A HNA1 sing N N 41
AQS N3A HNA2 sing N N 42
AQS N3A HNA3 sing N N 43
AQS C1B C2B sing N N 44
AQS C1B HB11 sing N N 45
AQS C1B HB12 sing N N 46
AQS C2B C3B sing N N 47
AQS C2B HB21 sing N N 48
AQS C2B HB22 sing N N 49
AQS C3B N3B sing N N 50
AQS C3B HB31 sing N N 51
AQS C3B HB32 sing N N 52
AQS N3B HNB1 sing N N 53
AQS N3B HNB2 sing N N 54
AQS N3B HNB3 sing N N 55
DA OP3 P sing N N 56
DA OP3 HOP3 sing N N 57
DA P OP1 doub N N 58
DA P OP2 sing N N 59
DA P "O5'" sing N N 60
DA OP2 HOP2 sing N N 61
DA "O5'" "C5'" sing N N 62
DA "C5'" "C4'" sing N N 63
DA "C5'" "H5'" sing N N 64
DA "C5'" "H5''" sing N N 65
DA "C4'" "O4'" sing N N 66
DA "C4'" "C3'" sing N N 67
DA "C4'" "H4'" sing N N 68
DA "O4'" "C1'" sing N N 69
DA "C3'" "O3'" sing N N 70
DA "C3'" "C2'" sing N N 71
DA "C3'" "H3'" sing N N 72
DA "O3'" "HO3'" sing N N 73
DA "C2'" "C1'" sing N N 74
DA "C2'" "H2'" sing N N 75
DA "C2'" "H2''" sing N N 76
DA "C1'" N9 sing N N 77
DA "C1'" "H1'" sing N N 78
DA N9 C8 sing Y N 79
DA N9 C4 sing Y N 80
DA C8 N7 doub Y N 81
DA C8 H8 sing N N 82
DA N7 C5 sing Y N 83
DA C5 C6 sing Y N 84
DA C5 C4 doub Y N 85
DA C6 N6 sing N N 86
DA C6 N1 doub Y N 87
DA N6 H61 sing N N 88
DA N6 H62 sing N N 89
DA N1 C2 sing Y N 90
DA C2 N3 doub Y N 91
DA C2 H2 sing N N 92
DA N3 C4 sing Y N 93
DC OP3 P sing N N 94
DC OP3 HOP3 sing N N 95
DC P OP1 doub N N 96
DC P OP2 sing N N 97
DC P "O5'" sing N N 98
DC OP2 HOP2 sing N N 99
DC "O5'" "C5'" sing N N 100
DC "C5'" "C4'" sing N N 101
DC "C5'" "H5'" sing N N 102
DC "C5'" "H5''" sing N N 103
DC "C4'" "O4'" sing N N 104
DC "C4'" "C3'" sing N N 105
DC "C4'" "H4'" sing N N 106
DC "O4'" "C1'" sing N N 107
DC "C3'" "O3'" sing N N 108
DC "C3'" "C2'" sing N N 109
DC "C3'" "H3'" sing N N 110
DC "O3'" "HO3'" sing N N 111
DC "C2'" "C1'" sing N N 112
DC "C2'" "H2'" sing N N 113
DC "C2'" "H2''" sing N N 114
DC "C1'" N1 sing N N 115
DC "C1'" "H1'" sing N N 116
DC N1 C2 sing N N 117
DC N1 C6 sing N N 118
DC C2 O2 doub N N 119
DC C2 N3 sing N N 120
DC N3 C4 doub N N 121
DC C4 N4 sing N N 122
DC C4 C5 sing N N 123
DC N4 H41 sing N N 124
DC N4 H42 sing N N 125
DC C5 C6 doub N N 126
DC C5 H5 sing N N 127
DC C6 H6 sing N N 128
DG OP3 P sing N N 129
DG OP3 HOP3 sing N N 130
DG P OP1 doub N N 131
DG P OP2 sing N N 132
DG P "O5'" sing N N 133
DG OP2 HOP2 sing N N 134
DG "O5'" "C5'" sing N N 135
DG "C5'" "C4'" sing N N 136
DG "C5'" "H5'" sing N N 137
DG "C5'" "H5''" sing N N 138
DG "C4'" "O4'" sing N N 139
DG "C4'" "C3'" sing N N 140
DG "C4'" "H4'" sing N N 141
DG "O4'" "C1'" sing N N 142
DG "C3'" "O3'" sing N N 143
DG "C3'" "C2'" sing N N 144
DG "C3'" "H3'" sing N N 145
DG "O3'" "HO3'" sing N N 146
DG "C2'" "C1'" sing N N 147
DG "C2'" "H2'" sing N N 148
DG "C2'" "H2''" sing N N 149
DG "C1'" N9 sing N N 150
DG "C1'" "H1'" sing N N 151
DG N9 C8 sing Y N 152
DG N9 C4 sing Y N 153
DG C8 N7 doub Y N 154
DG C8 H8 sing N N 155
DG N7 C5 sing Y N 156
DG C5 C6 sing N N 157
DG C5 C4 doub Y N 158
DG C6 O6 doub N N 159
DG C6 N1 sing N N 160
DG N1 C2 sing N N 161
DG N1 H1 sing N N 162
DG C2 N2 sing N N 163
DG C2 N3 doub N N 164
DG N2 H21 sing N N 165
DG N2 H22 sing N N 166
DG N3 C4 sing N N 167
DT OP3 P sing N N 168
DT OP3 HOP3 sing N N 169
DT P OP1 doub N N 170
DT P OP2 sing N N 171
DT P "O5'" sing N N 172
DT OP2 HOP2 sing N N 173
DT "O5'" "C5'" sing N N 174
DT "C5'" "C4'" sing N N 175
DT "C5'" "H5'" sing N N 176
DT "C5'" "H5''" sing N N 177
DT "C4'" "O4'" sing N N 178
DT "C4'" "C3'" sing N N 179
DT "C4'" "H4'" sing N N 180
DT "O4'" "C1'" sing N N 181
DT "C3'" "O3'" sing N N 182
DT "C3'" "C2'" sing N N 183
DT "C3'" "H3'" sing N N 184
DT "O3'" "HO3'" sing N N 185
DT "C2'" "C1'" sing N N 186
DT "C2'" "H2'" sing N N 187
DT "C2'" "H2''" sing N N 188
DT "C1'" N1 sing N N 189
DT "C1'" "H1'" sing N N 190
DT N1 C2 sing N N 191
DT N1 C6 sing N N 192
DT C2 O2 doub N N 193
DT C2 N3 sing N N 194
DT N3 C4 sing N N 195
DT N3 H3 sing N N 196
DT C4 O4 doub N N 197
DT C4 C5 sing N N 198
DT C5 C7 sing N N 199
DT C5 C6 doub N N 200
DT C7 H71 sing N N 201
DT C7 H72 sing N N 202
DT C7 H73 sing N N 203
DT C6 H6 sing N N 204
HOH O H1 sing N N 205
HOH O H2 sing N N 206
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
386D 'double helix'
386D 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 A DG 6 11_655 0.356 -0.283 0.040 -2.280 5.598 -7.000 1 A_DC1:DG6_A A 1 ? A 6 ? 19 1
1 A DG 2 1_555 A DC 5 11_655 -0.183 -0.337 -0.157 -15.189 -6.482 -3.457 2 A_DG2:DC5_A A 2 ? A 5 ? 19 1
1 A DT 3 1_555 A DA 4 11_655 -0.426 -0.094 0.068 0.613 -7.027 -4.276 3 A_DT3:DA4_A A 3 ? A 4 ? 20 1
1 A DA 4 1_555 A DT 3 11_655 0.426 -0.094 0.068 -0.613 -7.027 -4.276 4 A_DA4:DT3_A A 4 ? A 3 ? 20 1
1 A DC 5 1_555 A DG 2 11_655 0.183 -0.337 -0.157 15.189 -6.482 -3.457 5 A_DC5:DG2_A A 5 ? A 2 ? 19 1
1 A DG 6 1_555 A DC 1 11_655 -0.356 -0.283 0.040 2.280 5.598 -7.000 6 A_DG6:DC1_A A 6 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 A DG 6 11_655 A DG 2 1_555 A DC 5 11_655 1.432 0.547 7.114 1.075 -10.522 29.884 5.198 -2.195 6.594 -19.645
-2.008 31.660 1 AA_DC1DG2:DC5DG6_AA A 1 ? A 6 ? A 2 ? A 5 ?
1 A DG 2 1_555 A DC 5 11_655 A DT 3 1_555 A DA 4 11_655 -0.936 -0.162 2.929 -1.352 0.042 28.525 -0.337 1.621 2.969 0.086
2.742 28.557 2 AA_DG2DT3:DA4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ?
1 A DT 3 1_555 A DA 4 11_655 A DA 4 1_555 A DT 3 11_655 0.000 -0.179 3.372 0.000 3.816 39.072 -0.734 0.000 3.341 5.689
0.000 39.251 3 AA_DT3DA4:DT3DA4_AA A 3 ? A 4 ? A 4 ? A 3 ?
1 A DA 4 1_555 A DT 3 11_655 A DC 5 1_555 A DG 2 11_655 0.936 -0.162 2.929 1.352 0.042 28.525 -0.337 -1.621 2.969 0.086
-2.742 28.557 4 AA_DA4DC5:DG2DT3_AA A 4 ? A 3 ? A 5 ? A 2 ?
1 A DC 5 1_555 A DG 2 11_655 A DG 6 1_555 A DC 1 11_655 -1.432 0.547 7.114 -1.075 -10.522 29.884 5.198 2.195 6.594 -19.645
2.008 31.660 5 AA_DC5DG6:DC1DG2_AA A 5 ? A 2 ? A 6 ? A 1 ?
#
_atom_sites.entry_id 386D
_atom_sites.fract_transf_matrix[1][1] 0.032237
_atom_sites.fract_transf_matrix[1][2] 0.018612
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.037224
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.015406
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
S
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 7.131 3.724 25.592 1.00 32.17 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 5.796 3.577 25.048 1.00 30.73 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 5.320 4.758 24.148 1.00 26.68 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 5.469 6.029 24.820 1.00 24.91 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 6.099 4.837 22.827 1.00 25.57 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 5.217 4.948 21.690 1.00 24.42 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 6.989 6.044 23.005 1.00 21.10 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 6.303 6.894 24.053 1.00 20.95 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 7.316 7.575 24.901 1.00 20.49 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 7.388 8.967 24.821 1.00 17.60 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 6.641 9.643 24.105 1.00 16.14 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 8.340 9.593 25.551 1.00 14.96 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 9.170 8.910 26.333 1.00 17.05 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 10.053 9.625 27.014 1.00 14.59 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 9.115 7.476 26.445 1.00 18.40 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 8.170 6.860 25.709 1.00 18.05 ? 1 DC A C6 1
ATOM 17 P P . DG A 1 2 ? 5.526 4.262 20.255 1.00 25.54 ? 2 DG A P 1
ATOM 18 O OP1 . DG A 1 2 ? 4.247 4.029 19.558 1.00 26.58 ? 2 DG A OP1 1
ATOM 19 O OP2 . DG A 1 2 ? 6.461 3.137 20.450 1.00 28.36 ? 2 DG A OP2 1
ATOM 20 O "O5'" . DG A 1 2 ? 6.321 5.391 19.492 1.00 25.76 ? 2 DG A "O5'" 1
ATOM 21 C "C5'" . DG A 1 2 ? 5.647 6.627 19.322 1.00 24.81 ? 2 DG A "C5'" 1
ATOM 22 C "C4'" . DG A 1 2 ? 6.542 7.672 18.709 1.00 23.30 ? 2 DG A "C4'" 1
ATOM 23 O "O4'" . DG A 1 2 ? 7.674 8.007 19.530 1.00 23.12 ? 2 DG A "O4'" 1
ATOM 24 C "C3'" . DG A 1 2 ? 6.982 7.195 17.329 1.00 20.87 ? 2 DG A "C3'" 1
ATOM 25 O "O3'" . DG A 1 2 ? 6.174 7.918 16.421 1.00 19.21 ? 2 DG A "O3'" 1
ATOM 26 C "C2'" . DG A 1 2 ? 8.413 7.588 17.325 1.00 21.26 ? 2 DG A "C2'" 1
ATOM 27 C "C1'" . DG A 1 2 ? 8.629 8.426 18.580 1.00 21.19 ? 2 DG A "C1'" 1
ATOM 28 N N9 . DG A 1 2 ? 9.963 8.173 19.124 1.00 19.16 ? 2 DG A N9 1
ATOM 29 C C8 . DG A 1 2 ? 10.624 6.994 19.388 1.00 16.10 ? 2 DG A C8 1
ATOM 30 N N7 . DG A 1 2 ? 11.833 7.180 19.851 1.00 17.26 ? 2 DG A N7 1
ATOM 31 C C5 . DG A 1 2 ? 11.956 8.568 19.881 1.00 15.70 ? 2 DG A C5 1
ATOM 32 C C6 . DG A 1 2 ? 13.013 9.382 20.297 1.00 16.71 ? 2 DG A C6 1
ATOM 33 O O6 . DG A 1 2 ? 14.099 9.051 20.744 1.00 17.49 ? 2 DG A O6 1
ATOM 34 N N1 . DG A 1 2 ? 12.696 10.715 20.152 1.00 16.35 ? 2 DG A N1 1
ATOM 35 C C2 . DG A 1 2 ? 11.516 11.199 19.673 1.00 12.93 ? 2 DG A C2 1
ATOM 36 N N2 . DG A 1 2 ? 11.347 12.495 19.613 1.00 15.24 ? 2 DG A N2 1
ATOM 37 N N3 . DG A 1 2 ? 10.521 10.464 19.285 1.00 12.07 ? 2 DG A N3 1
ATOM 38 C C4 . DG A 1 2 ? 10.813 9.163 19.428 1.00 16.07 ? 2 DG A C4 1
ATOM 39 P P . DT A 1 3 ? 6.408 8.085 14.861 1.00 17.40 ? 3 DT A P 1
ATOM 40 O OP1 . DT A 1 3 ? 5.074 8.142 14.234 1.00 19.07 ? 3 DT A OP1 1
ATOM 41 O OP2 . DT A 1 3 ? 7.429 7.097 14.415 1.00 19.75 ? 3 DT A OP2 1
ATOM 42 O "O5'" . DT A 1 3 ? 7.033 9.548 14.753 1.00 17.91 ? 3 DT A "O5'" 1
ATOM 43 C "C5'" . DT A 1 3 ? 6.252 10.657 15.187 1.00 13.04 ? 3 DT A "C5'" 1
ATOM 44 C "C4'" . DT A 1 3 ? 7.052 11.928 15.089 1.00 14.03 ? 3 DT A "C4'" 1
ATOM 45 O "O4'" . DT A 1 3 ? 8.273 11.792 15.854 1.00 13.63 ? 3 DT A "O4'" 1
ATOM 46 C "C3'" . DT A 1 3 ? 7.436 12.240 13.641 1.00 15.29 ? 3 DT A "C3'" 1
ATOM 47 O "O3'" . DT A 1 3 ? 7.116 13.618 13.391 1.00 16.95 ? 3 DT A "O3'" 1
ATOM 48 C "C2'" . DT A 1 3 ? 8.936 11.936 13.620 1.00 13.01 ? 3 DT A "C2'" 1
ATOM 49 C "C1'" . DT A 1 3 ? 9.388 12.171 15.045 1.00 11.20 ? 3 DT A "C1'" 1
ATOM 50 N N1 . DT A 1 3 ? 10.502 11.322 15.487 1.00 9.48 ? 3 DT A N1 1
ATOM 51 C C2 . DT A 1 3 ? 11.544 11.946 16.089 1.00 11.98 ? 3 DT A C2 1
ATOM 52 O O2 . DT A 1 3 ? 11.610 13.149 16.237 1.00 12.14 ? 3 DT A O2 1
ATOM 53 N N3 . DT A 1 3 ? 12.571 11.171 16.527 1.00 12.38 ? 3 DT A N3 1
ATOM 54 C C4 . DT A 1 3 ? 12.649 9.824 16.428 1.00 11.62 ? 3 DT A C4 1
ATOM 55 O O4 . DT A 1 3 ? 13.622 9.256 16.888 1.00 14.06 ? 3 DT A O4 1
ATOM 56 C C5 . DT A 1 3 ? 11.526 9.213 15.788 1.00 13.71 ? 3 DT A C5 1
ATOM 57 C C7 . DT A 1 3 ? 11.508 7.695 15.613 1.00 11.79 ? 3 DT A C7 1
ATOM 58 C C6 . DT A 1 3 ? 10.498 9.965 15.354 1.00 12.71 ? 3 DT A C6 1
ATOM 59 P P . DA A 1 4 ? 7.364 14.327 11.996 1.00 18.25 ? 4 DA A P 1
ATOM 60 O OP1 . DA A 1 4 ? 6.446 15.485 11.860 1.00 20.86 ? 4 DA A OP1 1
ATOM 61 O OP2 . DA A 1 4 ? 7.421 13.256 10.967 1.00 20.85 ? 4 DA A OP2 1
ATOM 62 O "O5'" . DA A 1 4 ? 8.837 14.890 12.208 1.00 14.98 ? 4 DA A "O5'" 1
ATOM 63 C "C5'" . DA A 1 4 ? 9.049 15.880 13.194 1.00 11.64 ? 4 DA A "C5'" 1
ATOM 64 C "C4'" . DA A 1 4 ? 10.477 16.382 13.167 1.00 15.41 ? 4 DA A "C4'" 1
ATOM 65 O "O4'" . DA A 1 4 ? 11.407 15.411 13.650 1.00 11.43 ? 4 DA A "O4'" 1
ATOM 66 C "C3'" . DA A 1 4 ? 10.867 16.747 11.748 1.00 14.39 ? 4 DA A "C3'" 1
ATOM 67 O "O3'" . DA A 1 4 ? 11.365 18.097 11.802 1.00 18.56 ? 4 DA A "O3'" 1
ATOM 68 C "C2'" . DA A 1 4 ? 11.876 15.657 11.436 1.00 14.26 ? 4 DA A "C2'" 1
ATOM 69 C "C1'" . DA A 1 4 ? 12.510 15.325 12.766 1.00 11.86 ? 4 DA A "C1'" 1
ATOM 70 N N9 . DA A 1 4 ? 12.916 13.932 12.926 1.00 14.49 ? 4 DA A N9 1
ATOM 71 C C8 . DA A 1 4 ? 12.254 12.801 12.528 1.00 13.30 ? 4 DA A C8 1
ATOM 72 N N7 . DA A 1 4 ? 12.873 11.697 12.827 1.00 15.15 ? 4 DA A N7 1
ATOM 73 C C5 . DA A 1 4 ? 14.019 12.126 13.489 1.00 11.48 ? 4 DA A C5 1
ATOM 74 C C6 . DA A 1 4 ? 15.090 11.443 14.064 1.00 8.19 ? 4 DA A C6 1
ATOM 75 N N6 . DA A 1 4 ? 15.186 10.126 14.103 1.00 7.41 ? 4 DA A N6 1
ATOM 76 N N1 . DA A 1 4 ? 16.075 12.166 14.589 1.00 6.90 ? 4 DA A N1 1
ATOM 77 C C2 . DA A 1 4 ? 15.973 13.482 14.586 1.00 11.11 ? 4 DA A C2 1
ATOM 78 N N3 . DA A 1 4 ? 15.022 14.252 14.094 1.00 13.38 ? 4 DA A N3 1
ATOM 79 C C4 . DA A 1 4 ? 14.051 13.489 13.555 1.00 13.68 ? 4 DA A C4 1
ATOM 80 P P . DC A 1 5 ? 11.902 18.930 10.533 1.00 23.98 ? 5 DC A P 1
ATOM 81 O OP1 . DC A 1 5 ? 12.006 20.359 10.906 1.00 22.46 ? 5 DC A OP1 1
ATOM 82 O OP2 . DC A 1 5 ? 11.142 18.529 9.327 1.00 20.57 ? 5 DC A OP2 1
ATOM 83 O "O5'" . DC A 1 5 ? 13.391 18.392 10.353 1.00 23.11 ? 5 DC A "O5'" 1
ATOM 84 C "C5'" . DC A 1 5 ? 14.382 18.788 11.307 1.00 22.16 ? 5 DC A "C5'" 1
ATOM 85 C "C4'" . DC A 1 5 ? 15.659 18.015 11.079 1.00 22.14 ? 5 DC A "C4'" 1
ATOM 86 O "O4'" . DC A 1 5 ? 15.402 16.642 11.363 1.00 18.16 ? 5 DC A "O4'" 1
ATOM 87 C "C3'" . DC A 1 5 ? 16.081 18.121 9.601 1.00 25.05 ? 5 DC A "C3'" 1
ATOM 88 O "O3'" . DC A 1 5 ? 17.439 18.553 9.451 1.00 32.54 ? 5 DC A "O3'" 1
ATOM 89 C "C2'" . DC A 1 5 ? 15.926 16.697 9.172 1.00 22.88 ? 5 DC A "C2'" 1
ATOM 90 C "C1'" . DC A 1 5 ? 16.187 15.953 10.456 1.00 16.78 ? 5 DC A "C1'" 1
ATOM 91 N N1 . DC A 1 5 ? 15.867 14.528 10.446 1.00 15.07 ? 5 DC A N1 1
ATOM 92 C C2 . DC A 1 5 ? 16.683 13.686 11.183 1.00 13.67 ? 5 DC A C2 1
ATOM 93 O O2 . DC A 1 5 ? 17.627 14.123 11.836 1.00 15.16 ? 5 DC A O2 1
ATOM 94 N N3 . DC A 1 5 ? 16.436 12.352 11.173 1.00 11.27 ? 5 DC A N3 1
ATOM 95 C C4 . DC A 1 5 ? 15.416 11.870 10.474 1.00 15.90 ? 5 DC A C4 1
ATOM 96 N N4 . DC A 1 5 ? 15.192 10.569 10.511 1.00 12.59 ? 5 DC A N4 1
ATOM 97 C C5 . DC A 1 5 ? 14.544 12.718 9.726 1.00 14.42 ? 5 DC A C5 1
ATOM 98 C C6 . DC A 1 5 ? 14.809 14.040 9.751 1.00 17.89 ? 5 DC A C6 1
ATOM 99 P P . DG A 1 6 ? 18.025 19.264 8.114 1.00 35.70 ? 6 DG A P 1
ATOM 100 O OP1 . DG A 1 6 ? 17.884 20.721 8.311 1.00 38.24 ? 6 DG A OP1 1
ATOM 101 O OP2 . DG A 1 6 ? 17.527 18.613 6.883 1.00 30.14 ? 6 DG A OP2 1
ATOM 102 O "O5'" . DG A 1 6 ? 19.552 18.878 8.241 1.00 33.46 ? 6 DG A "O5'" 1
ATOM 103 C "C5'" . DG A 1 6 ? 20.457 19.425 9.203 1.00 28.71 ? 6 DG A "C5'" 1
ATOM 104 C "C4'" . DG A 1 6 ? 21.892 19.172 8.715 1.00 26.64 ? 6 DG A "C4'" 1
ATOM 105 O "O4'" . DG A 1 6 ? 22.297 17.784 8.690 1.00 22.80 ? 6 DG A "O4'" 1
ATOM 106 C "C3'" . DG A 1 6 ? 21.902 19.642 7.277 1.00 23.84 ? 6 DG A "C3'" 1
ATOM 107 O "O3'" . DG A 1 6 ? 22.061 21.059 7.281 1.00 27.15 ? 6 DG A "O3'" 1
ATOM 108 C "C2'" . DG A 1 6 ? 22.999 18.816 6.667 1.00 19.30 ? 6 DG A "C2'" 1
ATOM 109 C "C1'" . DG A 1 6 ? 23.000 17.512 7.470 1.00 16.41 ? 6 DG A "C1'" 1
ATOM 110 N N9 . DG A 1 6 ? 22.292 16.384 6.879 1.00 10.92 ? 6 DG A N9 1
ATOM 111 C C8 . DG A 1 6 ? 21.175 16.408 6.094 1.00 10.19 ? 6 DG A C8 1
ATOM 112 N N7 . DG A 1 6 ? 20.764 15.235 5.748 1.00 8.81 ? 6 DG A N7 1
ATOM 113 C C5 . DG A 1 6 ? 21.657 14.369 6.357 1.00 11.88 ? 6 DG A C5 1
ATOM 114 C C6 . DG A 1 6 ? 21.689 12.951 6.348 1.00 12.55 ? 6 DG A C6 1
ATOM 115 O O6 . DG A 1 6 ? 20.924 12.155 5.789 1.00 13.14 ? 6 DG A O6 1
ATOM 116 N N1 . DG A 1 6 ? 22.733 12.468 7.085 1.00 10.66 ? 6 DG A N1 1
ATOM 117 C C2 . DG A 1 6 ? 23.647 13.239 7.743 1.00 13.46 ? 6 DG A C2 1
ATOM 118 N N2 . DG A 1 6 ? 24.597 12.572 8.378 1.00 13.95 ? 6 DG A N2 1
ATOM 119 N N3 . DG A 1 6 ? 23.638 14.572 7.761 1.00 11.92 ? 6 DG A N3 1
ATOM 120 C C4 . DG A 1 6 ? 22.598 15.065 7.058 1.00 8.35 ? 6 DG A C4 1
HETATM 121 C C1 . AQS B 2 . ? 9.719 8.942 22.465 1.00 13.67 ? 7 AQS A C1 1
HETATM 122 C C2 . AQS B 2 . ? 10.220 7.693 22.858 1.00 16.06 ? 7 AQS A C2 1
HETATM 123 C C3 . AQS B 2 . ? 11.355 7.634 23.675 1.00 17.39 ? 7 AQS A C3 1
HETATM 124 C C4 . AQS B 2 . ? 12.015 8.806 24.087 1.00 13.12 ? 7 AQS A C4 1
HETATM 125 C C5 . AQS B 2 . ? 11.530 10.057 23.675 1.00 14.50 ? 7 AQS A C5 1
HETATM 126 C C6 . AQS B 2 . ? 12.219 11.319 24.116 1.00 14.61 ? 7 AQS A C6 1
HETATM 127 O O6 . AQS B 2 . ? 13.206 11.264 24.826 1.00 17.92 ? 7 AQS A O6 1
HETATM 128 C C7 . AQS B 2 . ? 11.662 12.657 23.671 1.00 15.41 ? 7 AQS A C7 1
HETATM 129 C C8 . AQS B 2 . ? 12.290 13.849 24.083 1.00 15.49 ? 7 AQS A C8 1
HETATM 130 C C9 . AQS B 2 . ? 11.779 15.085 23.646 1.00 15.94 ? 7 AQS A C9 1
HETATM 131 C C16 . AQS B 2 . ? 10.649 15.148 22.810 1.00 14.63 ? 7 AQS A C16 1
HETATM 132 C C17 . AQS B 2 . ? 10.002 13.963 22.422 1.00 16.51 ? 7 AQS A C17 1
HETATM 133 C C18 . AQS B 2 . ? 10.506 12.717 22.850 1.00 15.60 ? 7 AQS A C18 1
HETATM 134 C C19 . AQS B 2 . ? 9.806 11.448 22.429 1.00 16.51 ? 7 AQS A C19 1
HETATM 135 O O19 . AQS B 2 . ? 8.816 11.479 21.720 1.00 15.69 ? 7 AQS A O19 1
HETATM 136 C C20 . AQS B 2 . ? 10.374 10.121 22.863 1.00 15.37 ? 7 AQS A C20 1
HETATM 137 S S1 . AQS B 2 . ? 11.959 6.054 24.175 1.00 20.48 ? 7 AQS A S1 1
HETATM 138 O O1S . AQS B 2 . ? 12.567 6.182 25.473 1.00 18.76 ? 7 AQS A O1S 1
HETATM 139 O O2S . AQS B 2 . ? 10.888 5.091 24.169 1.00 15.16 ? 7 AQS A O2S 1
HETATM 140 N N1 . AQS B 2 . ? 13.190 5.602 23.005 1.00 22.91 ? 7 AQS A N1 1
HETATM 141 C C1A . AQS B 2 . ? 12.886 4.698 21.885 1.00 27.18 ? 7 AQS A C1A 1
HETATM 142 C C2A . AQS B 2 . ? 12.995 3.182 22.111 1.00 32.13 ? 7 AQS A C2A 1
HETATM 143 C C3A . AQS B 2 . ? 11.918 2.223 21.589 1.00 36.72 ? 7 AQS A C3A 1
HETATM 144 N N3A . AQS B 2 . ? 12.256 1.247 20.541 1.00 40.19 ? 7 AQS A N3A 1
HETATM 145 C C1B . AQS B 2 . ? 14.462 6.333 22.815 1.00 20.26 ? 7 AQS A C1B 1
HETATM 146 C C2B . AQS B 2 . ? 15.789 5.790 23.395 1.00 19.86 ? 7 AQS A C2B 1
HETATM 147 C C3B . AQS B 2 . ? 15.776 4.696 24.500 1.00 20.09 ? 7 AQS A C3B 1
HETATM 148 N N3B . AQS B 2 . ? 17.002 4.021 24.966 1.00 14.84 ? 7 AQS A N3B 1
HETATM 149 O O . HOH C 3 . ? 16.983 9.805 27.044 0.50 31.01 ? 21 HOH A O 1
HETATM 150 O O . HOH C 3 . ? 5.351 9.268 21.635 0.50 25.40 ? 22 HOH A O 1
HETATM 151 O O . HOH C 3 . ? 22.145 -4.498 25.629 1.00 30.11 ? 23 HOH A O 1
HETATM 152 O O . HOH C 3 . ? 10.868 14.023 7.319 1.00 51.27 ? 24 HOH A O 1
HETATM 153 O O . HOH C 3 . ? 12.480 -1.766 21.445 1.00 27.04 ? 25 HOH A O 1
HETATM 154 O O . HOH C 3 . ? 12.713 4.345 15.922 1.00 27.20 ? 26 HOH A O 1
HETATM 155 O O . HOH C 3 . ? 9.823 2.873 8.807 1.00 38.36 ? 27 HOH A O 1
HETATM 156 O O . HOH C 3 . ? 22.345 0.729 26.121 1.00 39.98 ? 28 HOH A O 1
HETATM 157 O O . HOH C 3 . ? 10.046 12.524 10.249 1.00 29.29 ? 29 HOH A O 1
HETATM 158 O O . HOH C 3 . ? 12.432 9.664 9.319 1.00 45.05 ? 30 HOH A O 1
HETATM 159 O O . HOH C 3 . ? 12.053 9.121 12.292 1.00 29.10 ? 31 HOH A O 1
HETATM 160 O O . HOH C 3 . ? 14.386 6.495 17.140 1.00 24.20 ? 32 HOH A O 1
HETATM 161 O O . HOH C 3 . ? 10.180 3.995 17.932 1.00 41.63 ? 33 HOH A O 1
HETATM 162 O O . HOH C 3 . ? 7.156 -1.975 6.531 1.00 31.13 ? 34 HOH A O 1
HETATM 163 O O . HOH C 3 . ? 12.648 16.288 7.958 1.00 33.18 ? 35 HOH A O 1
HETATM 164 O O . HOH C 3 . ? 15.022 12.059 26.987 1.00 30.45 ? 36 HOH A O 1
HETATM 165 O O . HOH C 3 . ? 9.147 2.516 23.341 1.00 36.30 ? 37 HOH A O 1
HETATM 166 O O . HOH C 3 . ? 16.074 6.252 19.738 1.00 46.75 ? 38 HOH A O 1
HETATM 167 O O . HOH C 3 . ? 14.808 13.484 31.658 1.00 52.17 ? 39 HOH A O 1
HETATM 168 O O . HOH C 3 . ? 19.750 23.133 7.666 1.00 54.35 ? 40 HOH A O 1
HETATM 169 O O . HOH C 3 . ? 9.508 4.297 20.950 1.00 40.92 ? 41 HOH A O 1
HETATM 170 O O . HOH C 3 . ? 9.535 7.427 12.344 1.00 55.13 ? 42 HOH A O 1
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