data_333D
#
_entry.id 333D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.389
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 333D pdb_0000333d 10.2210/pdb333d/pdb
RCSB ARHB90 ? ?
WWPDB D_1000178802 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1997-10-16
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2024-02-21
5 'Structure model' 2 1 2024-04-03
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Atomic model'
4 4 'Structure model' 'Data collection'
5 4 'Structure model' 'Database references'
6 4 'Structure model' 'Derived calculations'
7 5 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' chem_comp_atom
3 4 'Structure model' chem_comp_bond
4 4 'Structure model' database_2
5 4 'Structure model' pdbx_struct_conn_angle
6 4 'Structure model' struct_conn
7 4 'Structure model' struct_site
8 5 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.occupancy'
2 4 'Structure model' '_database_2.pdbx_DOI'
3 4 'Structure model' '_database_2.pdbx_database_accession'
4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'
11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'
18 4 'Structure model' '_pdbx_struct_conn_angle.value'
19 4 'Structure model' '_struct_conn.pdbx_dist_value'
20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
26 4 'Structure model' '_struct_conn.ptnr1_symmetry'
27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
32 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'
33 4 'Structure model' '_struct_conn.ptnr2_symmetry'
34 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
35 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
36 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 333D
_pdbx_database_status.recvd_initial_deposition_date 1997-05-20
_pdbx_database_status.deposit_site NDB
_pdbx_database_status.process_site NDB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Carter, R.J.' 1
'Baeyens, K.J.' 2
'SantaLucia Jr., J.' 3
'Turner, D.H.' 4
'Holbrook, S.R.' 5
#
_citation.id primary
_citation.title 'The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.'
_citation.journal_abbrev 'Nucleic Acids Res.'
_citation.journal_volume 25
_citation.page_first 4117
_citation.page_last 4122
_citation.year 1997
_citation.journal_id_ASTM NARHAD
_citation.country UK
_citation.journal_id_ISSN 0305-1048
_citation.journal_id_CSD 0389
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 9321667
_citation.pdbx_database_id_DOI 10.1093/nar/25.20.4117
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Carter, R.J.' 1 ?
primary 'Baeyens, K.J.' 2 ?
primary 'SantaLucia, J.' 3 ?
primary 'Turner, D.H.' 4 ?
primary 'Holbrook, S.R.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;RNA (5'-R(*CP*GP*CP*AP*IP*GP*CP*G)-3')
;
2565.602 1 ? ? ? ?
2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ?
3 water nat water 18.015 6 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code CGCAIGCG
_entity_poly.pdbx_seq_one_letter_code_can CGCAIGCG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'CALCIUM ION' CA
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 C n
1 2 G n
1 3 C n
1 4 A n
1 5 I n
1 6 G n
1 7 C n
1 8 G n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197
CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078
G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221
HOH non-polymer . WATER ? 'H2 O' 18.015
I 'RNA linking' y 'INOSINIC ACID' ? 'C10 H13 N4 O8 P' 348.206
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 C 1 1 1 C C A . n
A 1 2 G 2 2 2 G G A . n
A 1 3 C 3 3 3 C C A . n
A 1 4 A 4 4 4 A A A . n
A 1 5 I 5 5 5 I I A . n
A 1 6 G 6 6 6 G G A . n
A 1 7 C 7 7 7 C C A . n
A 1 8 G 8 8 8 G G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA 1 9 9 CA CA A .
C 3 HOH 1 10 10 HOH HOH A .
C 3 HOH 2 11 11 HOH HOH A .
C 3 HOH 3 12 12 HOH HOH A .
C 3 HOH 4 13 13 HOH HOH A .
C 3 HOH 5 14 14 HOH HOH A .
C 3 HOH 6 15 15 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
X-PLOR 'model building' . ? 1
X-PLOR refinement 3.1 ? 2
R-AXIS 'data reduction' . ? 3
X-PLOR phasing . ? 4
#
_cell.entry_id 333D
_cell.length_a 39.050
_cell.length_b 39.050
_cell.length_c 58.850
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 333D
_symmetry.space_group_name_H-M 'P 61 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 178
#
_exptl.entry_id 333D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.52
_exptl_crystal.density_percent_sol 49.7000
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details 'ROOM TEMPERATURE'
_exptl_crystal_grow.pH 7.50
_exptl_crystal_grow.pdbx_details 'pH 7.50, VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 'PEG 400' ? ? ?
1 3 1 CACL2 ? ? ?
1 4 1 HEPES ? ? ?
1 5 2 WATER ? ? ?
1 6 2 'PEG 400' ? ? ?
1 7 2 CACL2 ? ? ?
1 8 2 HEPES ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 297.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date 1993-04-21
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 333D
_reflns.observed_criterion_sigma_I 3.000
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 12.000
_reflns.d_resolution_high 2.520
_reflns.number_obs 1014
_reflns.number_all 5952
_reflns.percent_possible_obs 91.800
_reflns.pdbx_Rmerge_I_obs 0.0790000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 5.900
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 333D
_refine.ls_number_reflns_obs 1014
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 3.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 12.000
_refine.ls_d_res_high 2.520
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.2460000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.2460000
_refine.ls_R_factor_R_free 0.2660000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 10.00
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details
'NUCLEIC ACID RNA-DNA PARAMETER FILE: G. PARKINSON,ET AL. (1996) ACTA CRYST. D52, 57-64'
_refine.pdbx_starting_model 'CGC:GCG FRAGMENT OF ARL048'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 170
_refine_hist.pdbx_number_atoms_ligand 1
_refine_hist.number_atoms_solvent 6
_refine_hist.number_atoms_total 177
_refine_hist.d_res_high 2.520
_refine_hist.d_res_low 12.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 1.40 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d 11.0 ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d 1.39 ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_pdbx_xplor_file.serial_no 1
_pdbx_xplor_file.param_file TOPOL_BERMAN.RNA
_pdbx_xplor_file.topol_file PARAM_BERMAN.RNA
_pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 333D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 333D
_struct.title 'THE CRYSTAL STRUCTURE OF AN RNA OLIGOMER INCORPORATING TANDEM ADENOSINE-INOSINE MISMATCHES'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 333D
_struct_keywords.pdbx_keywords RNA
_struct_keywords.text 'A-RNA, DOUBLE HELIX, INTERNAL LOOP, MISMATCHED, RNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 333D
_struct_ref.pdbx_db_accession 333D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 333D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 8
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 333D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 8
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 8
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 39.0500000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 29.4250000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A G 6 OP1 ? ? ? 1_555 B CA . CA ? ? A G 6 A CA 9 1_555 ? ? ? ? ? ? ? 3.280 ? ?
metalc2 metalc ? ? A G 8 "O3'" ? ? ? 5_554 B CA . CA ? ? A G 8 A CA 9 1_555 ? ? ? ? ? ? ? 2.603 ? ?
metalc3 metalc ? ? A G 8 "O2'" ? ? ? 5_554 B CA . CA ? ? A G 8 A CA 9 1_555 ? ? ? ? ? ? ? 2.684 ? ?
metalc4 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 10 1_555 ? ? ? ? ? ? ? 2.668 ? ?
metalc5 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 11 1_555 ? ? ? ? ? ? ? 2.608 ? ?
metalc6 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 12 1_555 ? ? ? ? ? ? ? 2.671 ? ?
metalc7 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 13 1_555 ? ? ? ? ? ? ? 2.577 ? ?
hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 8 N1 ? ? A C 1 A G 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 8 O6 ? ? A C 1 A G 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 8 N2 ? ? A C 1 A G 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 7 N3 ? ? A G 2 A C 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 7 O2 ? ? A G 2 A C 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 7 N4 ? ? A G 2 A C 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 6 N1 ? ? A C 3 A G 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 6 O6 ? ? A C 3 A G 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 6 N2 ? ? A C 3 A G 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A A 4 N1 ? ? ? 1_555 A I 5 N1 ? ? A A 4 A I 5 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ?
hydrog11 hydrog ? ? A A 4 N6 ? ? ? 1_555 A I 5 O6 ? ? A A 4 A I 5 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ?
hydrog12 hydrog ? ? A I 5 N1 ? ? ? 1_555 A A 4 N1 ? ? A I 5 A A 4 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ?
hydrog13 hydrog ? ? A I 5 O6 ? ? ? 1_555 A A 4 N6 ? ? A I 5 A A 4 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ?
hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 3 N3 ? ? A G 6 A C 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 3 O2 ? ? A G 6 A C 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 3 N4 ? ? A G 6 A C 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 2 N1 ? ? A C 7 A G 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 2 O6 ? ? A C 7 A G 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 2 N2 ? ? A C 7 A G 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 1 N3 ? ? A G 8 A C 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 1 O2 ? ? A G 8 A C 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 1 N4 ? ? A G 8 A C 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 "O3'" ? A G 8 ? A G 8 ? 5_554 128.2 ?
2 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 "O2'" ? A G 8 ? A G 8 ? 5_554 69.0 ?
3 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 "O2'" ? A G 8 ? A G 8 ? 5_554 60.3 ?
4 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 10 ? 1_555 50.6 ?
5 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 10 ? 1_555 124.4 ?
6 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 10 ? 1_555 80.3 ?
7 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 63.9 ?
8 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 91.5 ?
9 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 73.5 ?
10 O ? C HOH . ? A HOH 10 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 114.3 ?
11 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 173.4 ?
12 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 52.6 ?
13 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 110.1 ?
14 O ? C HOH . ? A HOH 10 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 123.0 ?
15 O ? C HOH . ? A HOH 11 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 122.4 ?
16 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 110.8 ?
17 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 60.8 ?
18 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 69.5 ?
19 O ? C HOH . ? A HOH 10 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 69.9 ?
20 O ? C HOH . ? A HOH 11 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 141.4 ?
21 O ? C HOH . ? A HOH 12 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 63.3 ?
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id CA
_struct_site.pdbx_auth_seq_id 9
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 6
_struct_site.details 'BINDING SITE FOR RESIDUE CA A 9'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 6 G A 6 ? G A 6 . ? 1_555 ?
2 AC1 6 G A 8 ? G A 8 . ? 5_554 ?
3 AC1 6 HOH C . ? HOH A 10 . ? 1_555 ?
4 AC1 6 HOH C . ? HOH A 11 . ? 1_555 ?
5 AC1 6 HOH C . ? HOH A 12 . ? 1_555 ?
6 AC1 6 HOH C . ? HOH A 13 . ? 1_555 ?
#
_pdbx_validate_rmsd_angle.id 1
_pdbx_validate_rmsd_angle.PDB_model_num 1
_pdbx_validate_rmsd_angle.auth_atom_id_1 "O3'"
_pdbx_validate_rmsd_angle.auth_asym_id_1 A
_pdbx_validate_rmsd_angle.auth_comp_id_1 C
_pdbx_validate_rmsd_angle.auth_seq_id_1 3
_pdbx_validate_rmsd_angle.PDB_ins_code_1 ?
_pdbx_validate_rmsd_angle.label_alt_id_1 ?
_pdbx_validate_rmsd_angle.auth_atom_id_2 P
_pdbx_validate_rmsd_angle.auth_asym_id_2 A
_pdbx_validate_rmsd_angle.auth_comp_id_2 A
_pdbx_validate_rmsd_angle.auth_seq_id_2 4
_pdbx_validate_rmsd_angle.PDB_ins_code_2 ?
_pdbx_validate_rmsd_angle.label_alt_id_2 ?
_pdbx_validate_rmsd_angle.auth_atom_id_3 OP2
_pdbx_validate_rmsd_angle.auth_asym_id_3 A
_pdbx_validate_rmsd_angle.auth_comp_id_3 A
_pdbx_validate_rmsd_angle.auth_seq_id_3 4
_pdbx_validate_rmsd_angle.PDB_ins_code_3 ?
_pdbx_validate_rmsd_angle.label_alt_id_3 ?
_pdbx_validate_rmsd_angle.angle_value 117.97
_pdbx_validate_rmsd_angle.angle_target_value 110.50
_pdbx_validate_rmsd_angle.angle_deviation 7.47
_pdbx_validate_rmsd_angle.angle_standard_deviation 1.10
_pdbx_validate_rmsd_angle.linker_flag Y
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 14
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id C
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_refine_B_iso.class
_refine_B_iso.details
_refine_B_iso.treatment
_refine_B_iso.pdbx_refine_id
'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION'
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION'
#
loop_
_refine_occupancy.class
_refine_occupancy.treatment
_refine_occupancy.pdbx_refine_id
'ALL ATOMS' fix 'X-RAY DIFFRACTION'
'ALL WATERS' fix 'X-RAY DIFFRACTION'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A OP3 O N N 1
A P P N N 2
A OP1 O N N 3
A OP2 O N N 4
A "O5'" O N N 5
A "C5'" C N N 6
A "C4'" C N R 7
A "O4'" O N N 8
A "C3'" C N S 9
A "O3'" O N N 10
A "C2'" C N R 11
A "O2'" O N N 12
A "C1'" C N R 13
A N9 N Y N 14
A C8 C Y N 15
A N7 N Y N 16
A C5 C Y N 17
A C6 C Y N 18
A N6 N N N 19
A N1 N Y N 20
A C2 C Y N 21
A N3 N Y N 22
A C4 C Y N 23
A HOP3 H N N 24
A HOP2 H N N 25
A "H5'" H N N 26
A "H5''" H N N 27
A "H4'" H N N 28
A "H3'" H N N 29
A "HO3'" H N N 30
A "H2'" H N N 31
A "HO2'" H N N 32
A "H1'" H N N 33
A H8 H N N 34
A H61 H N N 35
A H62 H N N 36
A H2 H N N 37
C OP3 O N N 38
C P P N N 39
C OP1 O N N 40
C OP2 O N N 41
C "O5'" O N N 42
C "C5'" C N N 43
C "C4'" C N R 44
C "O4'" O N N 45
C "C3'" C N S 46
C "O3'" O N N 47
C "C2'" C N R 48
C "O2'" O N N 49
C "C1'" C N R 50
C N1 N N N 51
C C2 C N N 52
C O2 O N N 53
C N3 N N N 54
C C4 C N N 55
C N4 N N N 56
C C5 C N N 57
C C6 C N N 58
C HOP3 H N N 59
C HOP2 H N N 60
C "H5'" H N N 61
C "H5''" H N N 62
C "H4'" H N N 63
C "H3'" H N N 64
C "HO3'" H N N 65
C "H2'" H N N 66
C "HO2'" H N N 67
C "H1'" H N N 68
C H41 H N N 69
C H42 H N N 70
C H5 H N N 71
C H6 H N N 72
CA CA CA N N 73
G OP3 O N N 74
G P P N N 75
G OP1 O N N 76
G OP2 O N N 77
G "O5'" O N N 78
G "C5'" C N N 79
G "C4'" C N R 80
G "O4'" O N N 81
G "C3'" C N S 82
G "O3'" O N N 83
G "C2'" C N R 84
G "O2'" O N N 85
G "C1'" C N R 86
G N9 N Y N 87
G C8 C Y N 88
G N7 N Y N 89
G C5 C Y N 90
G C6 C N N 91
G O6 O N N 92
G N1 N N N 93
G C2 C N N 94
G N2 N N N 95
G N3 N N N 96
G C4 C Y N 97
G HOP3 H N N 98
G HOP2 H N N 99
G "H5'" H N N 100
G "H5''" H N N 101
G "H4'" H N N 102
G "H3'" H N N 103
G "HO3'" H N N 104
G "H2'" H N N 105
G "HO2'" H N N 106
G "H1'" H N N 107
G H8 H N N 108
G H1 H N N 109
G H21 H N N 110
G H22 H N N 111
HOH O O N N 112
HOH H1 H N N 113
HOH H2 H N N 114
I OP3 O N N 115
I P P N N 116
I OP1 O N N 117
I OP2 O N N 118
I "O5'" O N N 119
I "C5'" C N N 120
I "C4'" C N R 121
I "O4'" O N N 122
I "C3'" C N S 123
I "O3'" O N N 124
I "C2'" C N R 125
I "O2'" O N N 126
I "C1'" C N R 127
I N9 N Y N 128
I C8 C Y N 129
I N7 N Y N 130
I C5 C Y N 131
I C6 C N N 132
I O6 O N N 133
I N1 N N N 134
I C2 C N N 135
I N3 N N N 136
I C4 C Y N 137
I HOP3 H N N 138
I HOP2 H N N 139
I "H5'" H N N 140
I "H5''" H N N 141
I "H4'" H N N 142
I "H3'" H N N 143
I "HO3'" H N N 144
I "H2'" H N N 145
I "HO2'" H N N 146
I "H1'" H N N 147
I H8 H N N 148
I H1 H N N 149
I H2 H N N 150
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A OP3 P sing N N 1
A OP3 HOP3 sing N N 2
A P OP1 doub N N 3
A P OP2 sing N N 4
A P "O5'" sing N N 5
A OP2 HOP2 sing N N 6
A "O5'" "C5'" sing N N 7
A "C5'" "C4'" sing N N 8
A "C5'" "H5'" sing N N 9
A "C5'" "H5''" sing N N 10
A "C4'" "O4'" sing N N 11
A "C4'" "C3'" sing N N 12
A "C4'" "H4'" sing N N 13
A "O4'" "C1'" sing N N 14
A "C3'" "O3'" sing N N 15
A "C3'" "C2'" sing N N 16
A "C3'" "H3'" sing N N 17
A "O3'" "HO3'" sing N N 18
A "C2'" "O2'" sing N N 19
A "C2'" "C1'" sing N N 20
A "C2'" "H2'" sing N N 21
A "O2'" "HO2'" sing N N 22
A "C1'" N9 sing N N 23
A "C1'" "H1'" sing N N 24
A N9 C8 sing Y N 25
A N9 C4 sing Y N 26
A C8 N7 doub Y N 27
A C8 H8 sing N N 28
A N7 C5 sing Y N 29
A C5 C6 sing Y N 30
A C5 C4 doub Y N 31
A C6 N6 sing N N 32
A C6 N1 doub Y N 33
A N6 H61 sing N N 34
A N6 H62 sing N N 35
A N1 C2 sing Y N 36
A C2 N3 doub Y N 37
A C2 H2 sing N N 38
A N3 C4 sing Y N 39
C OP3 P sing N N 40
C OP3 HOP3 sing N N 41
C P OP1 doub N N 42
C P OP2 sing N N 43
C P "O5'" sing N N 44
C OP2 HOP2 sing N N 45
C "O5'" "C5'" sing N N 46
C "C5'" "C4'" sing N N 47
C "C5'" "H5'" sing N N 48
C "C5'" "H5''" sing N N 49
C "C4'" "O4'" sing N N 50
C "C4'" "C3'" sing N N 51
C "C4'" "H4'" sing N N 52
C "O4'" "C1'" sing N N 53
C "C3'" "O3'" sing N N 54
C "C3'" "C2'" sing N N 55
C "C3'" "H3'" sing N N 56
C "O3'" "HO3'" sing N N 57
C "C2'" "O2'" sing N N 58
C "C2'" "C1'" sing N N 59
C "C2'" "H2'" sing N N 60
C "O2'" "HO2'" sing N N 61
C "C1'" N1 sing N N 62
C "C1'" "H1'" sing N N 63
C N1 C2 sing N N 64
C N1 C6 sing N N 65
C C2 O2 doub N N 66
C C2 N3 sing N N 67
C N3 C4 doub N N 68
C C4 N4 sing N N 69
C C4 C5 sing N N 70
C N4 H41 sing N N 71
C N4 H42 sing N N 72
C C5 C6 doub N N 73
C C5 H5 sing N N 74
C C6 H6 sing N N 75
G OP3 P sing N N 76
G OP3 HOP3 sing N N 77
G P OP1 doub N N 78
G P OP2 sing N N 79
G P "O5'" sing N N 80
G OP2 HOP2 sing N N 81
G "O5'" "C5'" sing N N 82
G "C5'" "C4'" sing N N 83
G "C5'" "H5'" sing N N 84
G "C5'" "H5''" sing N N 85
G "C4'" "O4'" sing N N 86
G "C4'" "C3'" sing N N 87
G "C4'" "H4'" sing N N 88
G "O4'" "C1'" sing N N 89
G "C3'" "O3'" sing N N 90
G "C3'" "C2'" sing N N 91
G "C3'" "H3'" sing N N 92
G "O3'" "HO3'" sing N N 93
G "C2'" "O2'" sing N N 94
G "C2'" "C1'" sing N N 95
G "C2'" "H2'" sing N N 96
G "O2'" "HO2'" sing N N 97
G "C1'" N9 sing N N 98
G "C1'" "H1'" sing N N 99
G N9 C8 sing Y N 100
G N9 C4 sing Y N 101
G C8 N7 doub Y N 102
G C8 H8 sing N N 103
G N7 C5 sing Y N 104
G C5 C6 sing N N 105
G C5 C4 doub Y N 106
G C6 O6 doub N N 107
G C6 N1 sing N N 108
G N1 C2 sing N N 109
G N1 H1 sing N N 110
G C2 N2 sing N N 111
G C2 N3 doub N N 112
G N2 H21 sing N N 113
G N2 H22 sing N N 114
G N3 C4 sing N N 115
HOH O H1 sing N N 116
HOH O H2 sing N N 117
I OP3 P sing N N 118
I OP3 HOP3 sing N N 119
I P OP1 doub N N 120
I P OP2 sing N N 121
I P "O5'" sing N N 122
I OP2 HOP2 sing N N 123
I "O5'" "C5'" sing N N 124
I "C5'" "C4'" sing N N 125
I "C5'" "H5'" sing N N 126
I "C5'" "H5''" sing N N 127
I "C4'" "O4'" sing N N 128
I "C4'" "C3'" sing N N 129
I "C4'" "H4'" sing N N 130
I "O4'" "C1'" sing N N 131
I "C3'" "O3'" sing N N 132
I "C3'" "C2'" sing N N 133
I "C3'" "H3'" sing N N 134
I "O3'" "HO3'" sing N N 135
I "C2'" "O2'" sing N N 136
I "C2'" "C1'" sing N N 137
I "C2'" "H2'" sing N N 138
I "O2'" "HO2'" sing N N 139
I "C1'" N9 sing N N 140
I "C1'" "H1'" sing N N 141
I N9 C8 sing Y N 142
I N9 C4 sing Y N 143
I C8 N7 doub Y N 144
I C8 H8 sing N N 145
I N7 C5 sing Y N 146
I C5 C6 sing N N 147
I C5 C4 doub Y N 148
I C6 O6 doub N N 149
I C6 N1 sing N N 150
I N1 C2 sing N N 151
I N1 H1 sing N N 152
I C2 N3 doub N N 153
I C2 H2 sing N N 154
I N3 C4 sing N N 155
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
333D 'a-form double helix'
333D 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A C 1 1_555 A G 8 11_655 0.380 -0.429 0.502 7.233 -1.804 -4.454 1 A_C1:G8_A A 1 ? A 8 ? 19 1
1 A G 2 1_555 A C 7 11_655 -0.253 -0.522 0.686 -0.318 -13.423 -7.548 2 A_G2:C7_A A 2 ? A 7 ? 19 1
1 A C 3 1_555 A G 6 11_655 -0.332 -0.020 0.346 -0.152 -7.584 -2.523 3 A_C3:G6_A A 3 ? A 6 ? 19 1
1 A A 4 1_555 A I 5 11_655 -0.411 1.697 0.243 -3.619 -6.393 -3.987 4 A_A4:I5_A A 4 ? A 5 ? 8 ?
1 A I 5 1_555 A A 4 11_655 0.411 1.697 0.243 3.619 -6.393 -3.987 5 A_I5:A4_A A 5 ? A 4 ? 8 ?
1 A G 6 1_555 A C 3 11_655 0.332 -0.020 0.346 0.152 -7.584 -2.523 6 A_G6:C3_A A 6 ? A 3 ? 19 1
1 A C 7 1_555 A G 2 11_655 0.253 -0.522 0.686 0.318 -13.423 -7.548 7 A_C7:G2_A A 7 ? A 2 ? 19 1
1 A G 8 1_555 A C 1 11_655 -0.380 -0.429 0.502 -7.233 -1.804 -4.454 8 A_G8:C1_A A 8 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A C 1 1_555 A G 8 11_655 A G 2 1_555 A C 7 11_655 -0.430 -1.987 3.416 -1.681 -0.840 31.352 -3.505 0.461 3.485 -1.553 3.108
31.406 1 AA_C1G2:C7G8_AA A 1 ? A 8 ? A 2 ? A 7 ?
1 A G 2 1_555 A C 7 11_655 A C 3 1_555 A G 6 11_655 0.000 -2.556 3.041 4.581 2.407 34.397 -4.608 0.632 2.838 4.042 -7.692
34.772 2 AA_G2C3:G6C7_AA A 2 ? A 7 ? A 3 ? A 6 ?
1 A C 3 1_555 A G 6 11_655 A A 4 1_555 A I 5 11_655 0.001 -1.469 3.293 9.013 14.468 30.817 -4.419 1.234 2.310 24.974 -15.558
35.117 3 AA_C3A4:I5G6_AA A 3 ? A 6 ? A 4 ? A 5 ?
1 A A 4 1_555 A I 5 11_655 A I 5 1_555 A A 4 11_655 0.000 -1.649 2.828 0.000 14.616 24.649 -5.765 0.000 1.614 30.999 0.000
28.598 4 AA_A4I5:A4I5_AA A 4 ? A 5 ? A 5 ? A 4 ?
1 A I 5 1_555 A A 4 11_655 A G 6 1_555 A C 3 11_655 -0.001 -1.469 3.293 -9.013 14.468 30.817 -4.419 -1.234 2.310 24.974 15.558
35.117 5 AA_I5G6:C3A4_AA A 5 ? A 4 ? A 6 ? A 3 ?
1 A G 6 1_555 A C 3 11_655 A C 7 1_555 A G 2 11_655 0.000 -2.556 3.041 -4.581 2.407 34.397 -4.608 -0.632 2.838 4.042 7.692
34.772 6 AA_G6C7:G2C3_AA A 6 ? A 3 ? A 7 ? A 2 ?
1 A C 7 1_555 A G 2 11_655 A G 8 1_555 A C 1 11_655 0.430 -1.987 3.416 1.681 -0.840 31.352 -3.505 -0.461 3.485 -1.553 -3.108
31.406 7 AA_C7G8:C1G2_AA A 7 ? A 2 ? A 8 ? A 1 ?
#
_pdbx_initial_refinement_model.accession_code 157D
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.details 'CGC:GCG FRAGMENT OF ARL048'
#
_atom_sites.entry_id 333D
_atom_sites.fract_transf_matrix[1][1] 0.025608
_atom_sites.fract_transf_matrix[1][2] 0.014785
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.029570
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.016992
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CA
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . C A 1 1 ? 23.308 21.309 18.480 1.00 17.20 ? 1 C A "O5'" 1
ATOM 2 C "C5'" . C A 1 1 ? 23.929 22.379 17.733 1.00 46.81 ? 1 C A "C5'" 1
ATOM 3 C "C4'" . C A 1 1 ? 25.231 22.014 17.062 1.00 18.14 ? 1 C A "C4'" 1
ATOM 4 O "O4'" . C A 1 1 ? 26.181 21.574 18.059 1.00 18.14 ? 1 C A "O4'" 1
ATOM 5 C "C3'" . C A 1 1 ? 25.177 20.890 16.067 1.00 18.14 ? 1 C A "C3'" 1
ATOM 6 O "O3'" . C A 1 1 ? 24.701 21.410 14.827 1.00 46.81 ? 1 C A "O3'" 1
ATOM 7 C "C2'" . C A 1 1 ? 26.640 20.435 16.067 1.00 18.14 ? 1 C A "C2'" 1
ATOM 8 O "O2'" . C A 1 1 ? 27.560 21.325 15.505 1.00 17.20 ? 1 C A "O2'" 1
ATOM 9 C "C1'" . C A 1 1 ? 26.963 20.525 17.546 1.00 18.14 ? 1 C A "C1'" 1
ATOM 10 N N1 . C A 1 1 ? 26.668 19.294 18.279 1.00 17.20 ? 1 C A N1 1
ATOM 11 C C2 . C A 1 1 ? 27.456 18.183 18.034 1.00 17.20 ? 1 C A C2 1
ATOM 12 O O2 . C A 1 1 ? 28.351 18.284 17.178 1.00 17.20 ? 1 C A O2 1
ATOM 13 N N3 . C A 1 1 ? 27.235 17.033 18.717 1.00 17.20 ? 1 C A N3 1
ATOM 14 C C4 . C A 1 1 ? 26.244 16.978 19.596 1.00 17.20 ? 1 C A C4 1
ATOM 15 N N4 . C A 1 1 ? 26.042 15.846 20.227 1.00 17.20 ? 1 C A N4 1
ATOM 16 C C5 . C A 1 1 ? 25.411 18.091 19.852 1.00 17.20 ? 1 C A C5 1
ATOM 17 C C6 . C A 1 1 ? 25.656 19.219 19.184 1.00 17.20 ? 1 C A C6 1
ATOM 18 P P . G A 1 2 ? 23.910 20.434 13.729 1.00 28.67 ? 2 G A P 1
ATOM 19 O OP1 . G A 1 2 ? 23.482 21.412 12.666 1.00 28.67 ? 2 G A OP1 1
ATOM 20 O OP2 . G A 1 2 ? 22.875 19.585 14.397 1.00 28.67 ? 2 G A OP2 1
ATOM 21 O "O5'" . G A 1 2 ? 25.081 19.479 13.170 1.00 22.76 ? 2 G A "O5'" 1
ATOM 22 C "C5'" . G A 1 2 ? 26.149 20.010 12.398 1.00 28.67 ? 2 G A "C5'" 1
ATOM 23 C "C4'" . G A 1 2 ? 27.256 18.978 12.191 1.00 16.70 ? 2 G A "C4'" 1
ATOM 24 O "O4'" . G A 1 2 ? 27.850 18.646 13.452 1.00 16.70 ? 2 G A "O4'" 1
ATOM 25 C "C3'" . G A 1 2 ? 26.909 17.625 11.594 1.00 16.70 ? 2 G A "C3'" 1
ATOM 26 O "O3'" . G A 1 2 ? 26.749 17.688 10.175 1.00 28.67 ? 2 G A "O3'" 1
ATOM 27 C "C2'" . G A 1 2 ? 28.114 16.798 12.016 1.00 16.70 ? 2 G A "C2'" 1
ATOM 28 O "O2'" . G A 1 2 ? 29.331 17.114 11.389 1.00 22.76 ? 2 G A "O2'" 1
ATOM 29 C "C1'" . G A 1 2 ? 28.282 17.288 13.436 1.00 16.70 ? 2 G A "C1'" 1
ATOM 30 N N9 . G A 1 2 ? 27.411 16.517 14.300 1.00 22.76 ? 2 G A N9 1
ATOM 31 C C8 . G A 1 2 ? 26.312 16.979 14.950 1.00 22.76 ? 2 G A C8 1
ATOM 32 N N7 . G A 1 2 ? 25.720 16.058 15.655 1.00 22.76 ? 2 G A N7 1
ATOM 33 C C5 . G A 1 2 ? 26.483 14.927 15.451 1.00 22.76 ? 2 G A C5 1
ATOM 34 C C6 . G A 1 2 ? 26.314 13.657 15.939 1.00 22.76 ? 2 G A C6 1
ATOM 35 O O6 . G A 1 2 ? 25.418 13.241 16.722 1.00 22.76 ? 2 G A O6 1
ATOM 36 N N1 . G A 1 2 ? 27.292 12.795 15.459 1.00 22.76 ? 2 G A N1 1
ATOM 37 C C2 . G A 1 2 ? 28.291 13.143 14.630 1.00 22.76 ? 2 G A C2 1
ATOM 38 N N2 . G A 1 2 ? 29.107 12.176 14.277 1.00 22.76 ? 2 G A N2 1
ATOM 39 N N3 . G A 1 2 ? 28.475 14.348 14.183 1.00 22.76 ? 2 G A N3 1
ATOM 40 C C4 . G A 1 2 ? 27.525 15.186 14.623 1.00 22.76 ? 2 G A C4 1
ATOM 41 P P . C A 1 3 ? 25.783 16.616 9.391 1.00 25.62 ? 3 C A P 1
ATOM 42 O OP1 . C A 1 3 ? 25.981 16.903 7.942 1.00 25.62 ? 3 C A OP1 1
ATOM 43 O OP2 . C A 1 3 ? 24.398 16.662 9.922 1.00 25.62 ? 3 C A OP2 1
ATOM 44 O "O5'" . C A 1 3 ? 26.483 15.217 9.727 1.00 19.55 ? 3 C A "O5'" 1
ATOM 45 C "C5'" . C A 1 3 ? 27.839 14.940 9.370 1.00 25.62 ? 3 C A "C5'" 1
ATOM 46 C "C4'" . C A 1 3 ? 28.090 13.428 9.354 1.00 20.85 ? 3 C A "C4'" 1
ATOM 47 O "O4'" . C A 1 3 ? 28.386 12.946 10.697 1.00 20.85 ? 3 C A "O4'" 1
ATOM 48 C "C3'" . C A 1 3 ? 26.933 12.545 8.883 1.00 20.85 ? 3 C A "C3'" 1
ATOM 49 O "O3'" . C A 1 3 ? 26.844 12.446 7.457 1.00 25.62 ? 3 C A "O3'" 1
ATOM 50 C "C2'" . C A 1 3 ? 27.268 11.216 9.534 1.00 20.85 ? 3 C A "C2'" 1
ATOM 51 O "O2'" . C A 1 3 ? 28.279 10.483 8.873 1.00 19.55 ? 3 C A "O2'" 1
ATOM 52 C "C1'" . C A 1 3 ? 27.786 11.669 10.890 1.00 20.85 ? 3 C A "C1'" 1
ATOM 53 N N1 . C A 1 3 ? 26.706 11.794 11.878 1.00 19.55 ? 3 C A N1 1
ATOM 54 C C2 . C A 1 3 ? 26.402 10.721 12.663 1.00 19.55 ? 3 C A C2 1
ATOM 55 O O2 . C A 1 3 ? 27.047 9.687 12.528 1.00 19.55 ? 3 C A O2 1
ATOM 56 N N3 . C A 1 3 ? 25.410 10.822 13.567 1.00 19.55 ? 3 C A N3 1
ATOM 57 C C4 . C A 1 3 ? 24.742 11.962 13.704 1.00 19.55 ? 3 C A C4 1
ATOM 58 N N4 . C A 1 3 ? 23.779 12.038 14.623 1.00 19.55 ? 3 C A N4 1
ATOM 59 C C5 . C A 1 3 ? 25.034 13.079 12.909 1.00 19.55 ? 3 C A C5 1
ATOM 60 C C6 . C A 1 3 ? 26.021 12.953 12.009 1.00 19.55 ? 3 C A C6 1
ATOM 61 P P . A A 1 4 ? 25.468 11.993 6.744 1.00 14.93 ? 4 A A P 1
ATOM 62 O OP1 . A A 1 4 ? 25.950 11.807 5.378 1.00 14.93 ? 4 A A OP1 1
ATOM 63 O OP2 . A A 1 4 ? 24.256 12.803 6.997 1.00 14.93 ? 4 A A OP2 1
ATOM 64 O "O5'" . A A 1 4 ? 25.289 10.527 7.272 1.00 19.95 ? 4 A A "O5'" 1
ATOM 65 C "C5'" . A A 1 4 ? 24.238 9.732 6.789 1.00 14.93 ? 4 A A "C5'" 1
ATOM 66 C "C4'" . A A 1 4 ? 24.634 8.282 6.837 1.00 34.83 ? 4 A A "C4'" 1
ATOM 67 O "O4'" . A A 1 4 ? 25.346 8.039 8.071 1.00 34.83 ? 4 A A "O4'" 1
ATOM 68 C "C3'" . A A 1 4 ? 23.422 7.390 6.876 1.00 34.83 ? 4 A A "C3'" 1
ATOM 69 O "O3'" . A A 1 4 ? 23.102 7.014 5.552 1.00 14.93 ? 4 A A "O3'" 1
ATOM 70 C "C2'" . A A 1 4 ? 23.816 6.314 7.894 1.00 34.83 ? 4 A A "C2'" 1
ATOM 71 O "O2'" . A A 1 4 ? 24.712 5.334 7.393 1.00 19.95 ? 4 A A "O2'" 1
ATOM 72 C "C1'" . A A 1 4 ? 24.591 7.174 8.893 1.00 34.83 ? 4 A A "C1'" 1
ATOM 73 N N9 . A A 1 4 ? 23.840 8.057 9.797 1.00 19.95 ? 4 A A N9 1
ATOM 74 C C8 . A A 1 4 ? 23.651 9.404 9.629 1.00 19.95 ? 4 A A C8 1
ATOM 75 N N7 . A A 1 4 ? 22.964 9.970 10.591 1.00 19.95 ? 4 A A N7 1
ATOM 76 C C5 . A A 1 4 ? 22.693 8.923 11.452 1.00 19.95 ? 4 A A C5 1
ATOM 77 C C6 . A A 1 4 ? 22.002 8.869 12.662 1.00 19.95 ? 4 A A C6 1
ATOM 78 N N6 . A A 1 4 ? 21.441 9.933 13.252 1.00 19.95 ? 4 A A N6 1
ATOM 79 N N1 . A A 1 4 ? 21.892 7.673 13.253 1.00 19.95 ? 4 A A N1 1
ATOM 80 C C2 . A A 1 4 ? 22.447 6.604 12.662 1.00 19.95 ? 4 A A C2 1
ATOM 81 N N3 . A A 1 4 ? 23.123 6.530 11.543 1.00 19.95 ? 4 A A N3 1
ATOM 82 C C4 . A A 1 4 ? 23.215 7.739 10.975 1.00 19.95 ? 4 A A C4 1
ATOM 83 P P . I A 1 5 ? 21.666 7.423 4.970 1.00 28.47 ? 5 I A P 1
ATOM 84 O OP1 . I A 1 5 ? 21.575 6.862 3.576 1.00 28.47 ? 5 I A OP1 1
ATOM 85 O OP2 . I A 1 5 ? 21.374 8.868 5.211 1.00 28.47 ? 5 I A OP2 1
ATOM 86 O "O5'" . I A 1 5 ? 20.691 6.537 5.854 1.00 32.38 ? 5 I A "O5'" 1
ATOM 87 C "C5'" . I A 1 5 ? 20.871 5.133 5.876 1.00 28.47 ? 5 I A "C5'" 1
ATOM 88 C "C4'" . I A 1 5 ? 20.206 4.534 7.092 1.00 32.02 ? 5 I A "C4'" 1
ATOM 89 O "O4'" . I A 1 5 ? 20.884 4.967 8.303 1.00 32.02 ? 5 I A "O4'" 1
ATOM 90 C "C3'" . I A 1 5 ? 18.772 4.939 7.362 1.00 32.02 ? 5 I A "C3'" 1
ATOM 91 O "O3'" . I A 1 5 ? 17.863 4.287 6.486 1.00 28.47 ? 5 I A "O3'" 1
ATOM 92 C "C2'" . I A 1 5 ? 18.630 4.463 8.799 1.00 32.02 ? 5 I A "C2'" 1
ATOM 93 O "O2'" . I A 1 5 ? 18.536 3.057 8.905 1.00 32.38 ? 5 I A "O2'" 1
ATOM 94 C "C1'" . I A 1 5 ? 19.983 4.873 9.395 1.00 32.02 ? 5 I A "C1'" 1
ATOM 95 N N9 . I A 1 5 ? 19.865 6.180 10.026 1.00 32.38 ? 5 I A N9 1
ATOM 96 C C8 . I A 1 5 ? 20.230 7.380 9.498 1.00 32.38 ? 5 I A C8 1
ATOM 97 N N7 . I A 1 5 ? 19.945 8.395 10.276 1.00 32.38 ? 5 I A N7 1
ATOM 98 C C5 . I A 1 5 ? 19.364 7.811 11.402 1.00 32.38 ? 5 I A C5 1
ATOM 99 C C6 . I A 1 5 ? 18.839 8.409 12.631 1.00 32.38 ? 5 I A C6 1
ATOM 100 O O6 . I A 1 5 ? 18.791 9.629 12.967 1.00 32.38 ? 5 I A O6 1
ATOM 101 N N1 . I A 1 5 ? 18.343 7.438 13.485 1.00 32.38 ? 5 I A N1 1
ATOM 102 C C2 . I A 1 5 ? 18.339 6.090 13.227 1.00 32.38 ? 5 I A C2 1
ATOM 103 N N3 . I A 1 5 ? 18.825 5.525 12.126 1.00 32.38 ? 5 I A N3 1
ATOM 104 C C4 . I A 1 5 ? 19.316 6.438 11.261 1.00 32.38 ? 5 I A C4 1
ATOM 105 P P . G A 1 6 ? 16.378 4.823 6.382 1.00 13.80 ? 6 G A P 1
ATOM 106 O OP1 . G A 1 6 ? 15.689 3.985 5.418 1.00 13.80 ? 6 G A OP1 1
ATOM 107 O OP2 . G A 1 6 ? 16.353 6.281 6.234 1.00 13.80 ? 6 G A OP2 1
ATOM 108 O "O5'" . G A 1 6 ? 15.787 4.486 7.795 1.00 20.76 ? 6 G A "O5'" 1
ATOM 109 C "C5'" . G A 1 6 ? 15.670 3.143 8.204 1.00 13.80 ? 6 G A "C5'" 1
ATOM 110 C "C4'" . G A 1 6 ? 14.954 3.075 9.518 1.00 11.45 ? 6 G A "C4'" 1
ATOM 111 O "O4'" . G A 1 6 ? 15.805 3.654 10.546 1.00 11.45 ? 6 G A "O4'" 1
ATOM 112 C "C3'" . G A 1 6 ? 13.714 3.922 9.539 1.00 11.45 ? 6 G A "C3'" 1
ATOM 113 O "O3'" . G A 1 6 ? 12.639 3.211 8.985 1.00 13.80 ? 6 G A "O3'" 1
ATOM 114 C "C2'" . G A 1 6 ? 13.562 4.197 11.026 1.00 11.45 ? 6 G A "C2'" 1
ATOM 115 O "O2'" . G A 1 6 ? 12.973 3.158 11.757 1.00 20.76 ? 6 G A "O2'" 1
ATOM 116 C "C1'" . G A 1 6 ? 15.010 4.345 11.469 1.00 11.45 ? 6 G A "C1'" 1
ATOM 117 N N9 . G A 1 6 ? 15.425 5.730 11.479 1.00 20.76 ? 6 G A N9 1
ATOM 118 C C8 . G A 1 6 ? 16.310 6.356 10.648 1.00 20.76 ? 6 G A C8 1
ATOM 119 N N7 . G A 1 6 ? 16.464 7.626 10.924 1.00 20.76 ? 6 G A N7 1
ATOM 120 C C5 . G A 1 6 ? 15.629 7.848 12.008 1.00 20.76 ? 6 G A C5 1
ATOM 121 C C6 . G A 1 6 ? 15.356 9.038 12.759 1.00 20.76 ? 6 G A C6 1
ATOM 122 O O6 . G A 1 6 ? 15.838 10.167 12.632 1.00 20.76 ? 6 G A O6 1
ATOM 123 N N1 . G A 1 6 ? 14.423 8.799 13.749 1.00 20.76 ? 6 G A N1 1
ATOM 124 C C2 . G A 1 6 ? 13.834 7.570 14.019 1.00 20.76 ? 6 G A C2 1
ATOM 125 N N2 . G A 1 6 ? 12.959 7.499 15.044 1.00 20.76 ? 6 G A N2 1
ATOM 126 N N3 . G A 1 6 ? 14.082 6.473 13.345 1.00 20.76 ? 6 G A N3 1
ATOM 127 C C4 . G A 1 6 ? 14.978 6.681 12.359 1.00 20.76 ? 6 G A C4 1
ATOM 128 P P . C A 1 7 ? 11.229 3.925 8.838 1.00 16.30 ? 7 C A P 1
ATOM 129 O OP1 . C A 1 7 ? 10.205 2.891 8.823 1.00 16.30 ? 7 C A OP1 1
ATOM 130 O OP2 . C A 1 7 ? 11.199 5.045 7.892 1.00 16.30 ? 7 C A OP2 1
ATOM 131 O "O5'" . C A 1 7 ? 11.063 4.661 10.219 1.00 32.67 ? 7 C A "O5'" 1
ATOM 132 C "C5'" . C A 1 7 ? 10.391 4.046 11.297 1.00 16.30 ? 7 C A "C5'" 1
ATOM 133 C "C4'" . C A 1 7 ? 9.868 5.101 12.188 1.00 14.90 ? 7 C A "C4'" 1
ATOM 134 O "O4'" . C A 1 7 ? 10.967 5.975 12.499 1.00 14.90 ? 7 C A "O4'" 1
ATOM 135 C "C3'" . C A 1 7 ? 8.915 6.087 11.559 1.00 14.90 ? 7 C A "C3'" 1
ATOM 136 O "O3'" . C A 1 7 ? 7.641 5.495 11.510 1.00 16.30 ? 7 C A "O3'" 1
ATOM 137 C "C2'" . C A 1 7 ? 8.970 7.214 12.578 1.00 14.90 ? 7 C A "C2'" 1
ATOM 138 O "O2'" . C A 1 7 ? 8.240 6.875 13.726 1.00 32.67 ? 7 C A "O2'" 1
ATOM 139 C "C1'" . C A 1 7 ? 10.439 7.186 12.982 1.00 14.90 ? 7 C A "C1'" 1
ATOM 140 N N1 . C A 1 7 ? 11.190 8.261 12.409 1.00 32.67 ? 7 C A N1 1
ATOM 141 C C2 . C A 1 7 ? 11.051 9.509 12.956 1.00 32.67 ? 7 C A C2 1
ATOM 142 O O2 . C A 1 7 ? 10.272 9.669 13.905 1.00 32.67 ? 7 C A O2 1
ATOM 143 N N3 . C A 1 7 ? 11.767 10.534 12.441 1.00 32.67 ? 7 C A N3 1
ATOM 144 C C4 . C A 1 7 ? 12.601 10.321 11.410 1.00 32.67 ? 7 C A C4 1
ATOM 145 N N4 . C A 1 7 ? 13.303 11.366 10.941 1.00 32.67 ? 7 C A N4 1
ATOM 146 C C5 . C A 1 7 ? 12.745 9.038 10.826 1.00 32.67 ? 7 C A C5 1
ATOM 147 C C6 . C A 1 7 ? 12.025 8.046 11.352 1.00 32.67 ? 7 C A C6 1
ATOM 148 P P . G A 1 8 ? 6.393 6.273 10.844 1.00 16.57 ? 8 G A P 1
ATOM 149 O OP1 . G A 1 8 ? 5.276 5.311 11.040 1.00 16.57 ? 8 G A OP1 1
ATOM 150 O OP2 . G A 1 8 ? 6.810 6.649 9.505 1.00 16.57 ? 8 G A OP2 1
ATOM 151 O "O5'" . G A 1 8 ? 6.234 7.561 11.785 1.00 16.92 ? 8 G A "O5'" 1
ATOM 152 C "C5'" . G A 1 8 ? 5.303 8.616 11.493 1.00 16.57 ? 8 G A "C5'" 1
ATOM 153 C "C4'" . G A 1 8 ? 5.424 9.771 12.477 1.00 2.00 ? 8 G A "C4'" 1
ATOM 154 O "O4'" . G A 1 8 ? 6.790 10.012 12.794 1.00 2.00 ? 8 G A "O4'" 1
ATOM 155 C "C3'" . G A 1 8 ? 4.916 11.089 11.937 1.00 2.00 ? 8 G A "C3'" 1
ATOM 156 O "O3'" . G A 1 8 ? 3.533 11.372 12.119 1.00 16.57 ? 8 G A "O3'" 1
ATOM 157 C "C2'" . G A 1 8 ? 5.744 12.131 12.653 1.00 2.00 ? 8 G A "C2'" 1
ATOM 158 O "O2'" . G A 1 8 ? 5.166 12.556 13.847 1.00 16.92 ? 8 G A "O2'" 1
ATOM 159 C "C1'" . G A 1 8 ? 7.019 11.381 12.916 1.00 2.00 ? 8 G A "C1'" 1
ATOM 160 N N9 . G A 1 8 ? 8.026 11.750 11.962 1.00 16.92 ? 8 G A N9 1
ATOM 161 C C8 . G A 1 8 ? 8.666 10.935 11.075 1.00 16.92 ? 8 G A C8 1
ATOM 162 N N7 . G A 1 8 ? 9.544 11.564 10.353 1.00 16.92 ? 8 G A N7 1
ATOM 163 C C5 . G A 1 8 ? 9.472 12.879 10.797 1.00 16.92 ? 8 G A C5 1
ATOM 164 C C6 . G A 1 8 ? 10.186 14.014 10.396 1.00 16.92 ? 8 G A C6 1
ATOM 165 O O6 . G A 1 8 ? 11.045 14.112 9.546 1.00 16.92 ? 8 G A O6 1
ATOM 166 N N1 . G A 1 8 ? 9.818 15.135 11.096 1.00 16.92 ? 8 G A N1 1
ATOM 167 C C2 . G A 1 8 ? 8.895 15.165 12.054 1.00 16.92 ? 8 G A C2 1
ATOM 168 N N2 . G A 1 8 ? 8.720 16.358 12.598 1.00 16.92 ? 8 G A N2 1
ATOM 169 N N3 . G A 1 8 ? 8.187 14.113 12.456 1.00 16.92 ? 8 G A N3 1
ATOM 170 C C4 . G A 1 8 ? 8.537 13.005 11.783 1.00 16.92 ? 8 G A C4 1
HETATM 171 CA CA . CA B 2 . ? 12.972 4.412 3.631 1.00 32.08 ? 9 CA A CA 1
HETATM 172 O O . HOH C 3 . ? 13.276 4.420 6.282 1.00 34.79 ? 10 HOH A O 1
HETATM 173 O O . HOH C 3 . ? 15.143 3.845 2.302 1.00 39.25 ? 11 HOH A O 1
HETATM 174 O O . HOH C 3 . ? 10.604 4.732 2.438 1.00 11.45 ? 12 HOH A O 1
HETATM 175 O O . HOH C 3 . ? 10.948 3.284 4.758 1.00 24.45 ? 13 HOH A O 1
HETATM 176 O O . HOH C 3 . ? 3.685 6.380 9.810 0.50 7.13 ? 14 HOH A O 1
HETATM 177 O O . HOH C 3 . ? 19.968 8.196 1.864 1.00 35.13 ? 15 HOH A O 1
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