HEADER DNA 03-JAN-97 305D
TITLE SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE
TITLE 2 TETRAGONAL FORM
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA (5'-D(*IP*CP*AP*TP*AP*TP*IP*C)-3');
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DOUBLE DRUG IN THE MINOR
KEYWDS 2 GROOVE, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
REVDAT 4 03-APR-24 305D 1 REMARK
REVDAT 3 21-FEB-24 305D 1 REMARK LINK
REVDAT 2 24-FEB-09 305D 1 VERSN
REVDAT 1 22-SEP-97 305D 0
JRNL AUTH X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
JRNL TITL CRYSTAL STRUCTURES OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN
JRNL TITL 2 TO AT-CONTAINING DNA OCTAMERS D(ICITACIC) AND D(ICATATIC).
JRNL REF J.MOL.BIOL. V. 267 1157 1997
JRNL REFN ISSN 0022-2836
JRNL PMID 9150404
JRNL DOI 10.1006/JMBI.1997.0941
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH X.CHEN,B.RAMAKRISHNAN,S.T.RAO,M.SUNDARALINGAM
REMARK 1 TITL BINDING OF TWO DISTAMYCIN A MOLECULES IN THE MINOR GROOVE OF
REMARK 1 TITL 2 AN ALTERNATING B-DNA
REMARK 1 REF NAT.STRUCT.BIOL. V. 1 169 1994
REMARK 1 REFN ISSN 1072-8368
REMARK 1 REFERENCE 2
REMARK 1 AUTH X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
REMARK 1 TITL CRYSTAL STRUCTURES OF B-FORM DNA-RNA CHIMERS COMPLEXED WITH
REMARK 1 TITL 2 DISTAMYCIN
REMARK 1 REF NAT.STRUCT.BIOL. V. 2 733 1995
REMARK 1 REFN ISSN 1072-8368
REMARK 2
REMARK 2 RESOLUTION. 2.17 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 65.0
REMARK 3 NUMBER OF REFLECTIONS : 1126
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING SET) : 0.174
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 159
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 40
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.80
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.016
REMARK 3 BOND ANGLES (DEGREES) : 3.400
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 38.20
REMARK 3 IMPROPER ANGLES (DEGREES) : 3.100
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 305D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000178773.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 24-MAR-94
REMARK 200 TEMPERATURE (KELVIN) : 298.00
REMARK 200 PH : 7.00
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : GRAPHITE
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : AREA DETECTOR
REMARK 200 DETECTOR MANUFACTURER : SIEMENS-NICOLET
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XENGEN 2.0
REMARK 200 DATA SCALING SOFTWARE : XENGEN V. 2.0
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1432
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170
REMARK 200 RESOLUTION RANGE LOW (A) : NULL
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 83.0
REMARK 200 DATA REDUNDANCY : 5.600
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.05600
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIRECT REFINEMENT
REMARK 200 SOFTWARE USED: X-PLOR
REMARK 200 STARTING MODEL: GDLB51
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 46.09
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, VAPOR DIFFUSION, HANGING DROP
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y,X,Z+1/4
REMARK 290 4555 Y,-X,Z+3/4
REMARK 290 5555 -X,Y,-Z
REMARK 290 6555 X,-Y,-Z+1/2
REMARK 290 7555 Y,X,-Z+3/4
REMARK 290 8555 -Y,-X,-Z+1/4
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.31000
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.65500
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.96500
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.31000
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.96500
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 14.65500
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 29.31000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 DT A 4 C3' DT A 4 C2' -0.050
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DC A 2 O4' - C1' - N1 ANGL. DEV. = 6.0 DEGREES
REMARK 500 DC A 2 N1 - C2 - O2 ANGL. DEV. = 4.2 DEGREES
REMARK 500 DC A 2 N3 - C2 - O2 ANGL. DEV. = -4.3 DEGREES
REMARK 500 DA A 3 O3' - P - OP1 ANGL. DEV. = 15.8 DEGREES
REMARK 500 DT A 4 O4' - C1' - N1 ANGL. DEV. = 5.7 DEGREES
REMARK 500 DT A 4 C6 - C5 - C7 ANGL. DEV. = -4.9 DEGREES
REMARK 500 DA A 5 O4' - C1' - C2' ANGL. DEV. = -6.0 DEGREES
REMARK 500 DT A 6 O3' - P - OP2 ANGL. DEV. = 7.2 DEGREES
REMARK 500 DT A 6 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES
REMARK 500 DT A 6 N3 - C2 - O2 ANGL. DEV. = -4.0 DEGREES
REMARK 500 DT A 6 C6 - C5 - C7 ANGL. DEV. = -4.2 DEGREES
REMARK 500 DC A 8 N1 - C2 - O2 ANGL. DEV. = 3.7 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 DA A 3 0.09 SIDE CHAIN
REMARK 500 DA A 5 0.07 SIDE CHAIN
REMARK 500 DT A 6 0.07 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 10 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 DT A 6 OP2
REMARK 620 2 HOH A 11 O 85.4
REMARK 620 3 HOH A 12 O 97.3 161.6
REMARK 620 4 HOH A 13 O 85.8 88.1 74.0
REMARK 620 5 HOH A 14 O 92.0 105.6 92.6 166.0
REMARK 620 6 HOH A 20 O 176.2 90.8 86.4 94.6 88.5
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMY A 9
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 10
DBREF 305D A 1 8 PDB 305D 305D 1 8
SEQRES 1 A 8 DI DC DA DT DA DT DI DC
HET DMY A 9 35
HET MG A 10 1
HETNAM DMY DISTAMYCIN A
HETNAM MG MAGNESIUM ION
HETSYN DMY DISTAMYCIN; STALLIMYCIN
FORMUL 2 DMY C22 H27 N9 O4
FORMUL 3 MG MG 2+
FORMUL 4 HOH *40(H2 O)
LINK OP2 DT A 6 MG MG A 10 1555 1555 2.02
LINK MG MG A 10 O HOH A 11 1555 1555 1.91
LINK MG MG A 10 O HOH A 12 1555 4554 2.18
LINK MG MG A 10 O HOH A 13 1555 1555 2.14
LINK MG MG A 10 O HOH A 14 1555 1555 2.04
LINK MG MG A 10 O HOH A 20 1555 4554 2.19
SITE 1 AC1 11 DC A 2 DA A 3 DT A 4 DA A 5
SITE 2 AC1 11 DT A 6 DI A 7 DC A 8 HOH A 16
SITE 3 AC1 11 HOH A 23 HOH A 24 HOH A 50
SITE 1 AC2 6 DT A 6 HOH A 11 HOH A 12 HOH A 13
SITE 2 AC2 6 HOH A 14 HOH A 20
CRYST1 27.860 27.860 58.620 90.00 90.00 90.00 P 41 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.035894 0.000000 0.000000 0.00000
SCALE2 0.000000 0.035894 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017059 0.00000
ATOM 1 O5' DI A 1 -1.038 12.586 18.680 1.00 12.20 O
ATOM 2 C5' DI A 1 -1.564 13.416 17.639 1.00 11.62 C
ATOM 3 C4' DI A 1 -0.861 13.137 16.304 1.00 11.34 C
ATOM 4 O4' DI A 1 0.540 13.427 16.398 1.00 11.04 O
ATOM 5 C3' DI A 1 -1.005 11.714 15.816 1.00 11.41 C
ATOM 6 O3' DI A 1 -1.489 11.734 14.470 1.00 11.81 O
ATOM 7 C2' DI A 1 0.425 11.197 15.910 1.00 10.94 C
ATOM 8 C1' DI A 1 1.288 12.416 15.713 1.00 10.61 C
ATOM 9 N9 DI A 1 2.615 12.248 16.321 1.00 10.04 N
ATOM 10 C8 DI A 1 2.951 12.267 17.655 1.00 9.75 C
ATOM 11 N7 DI A 1 4.230 12.277 17.869 1.00 9.62 N
ATOM 12 C5 DI A 1 4.790 12.269 16.593 1.00 9.55 C
ATOM 13 C6 DI A 1 6.158 12.233 16.178 1.00 9.46 C
ATOM 14 O6 DI A 1 7.180 12.271 16.852 1.00 9.16 O
ATOM 15 N1 DI A 1 6.272 12.170 14.808 1.00 9.38 N
ATOM 16 C2 DI A 1 5.227 12.117 13.933 1.00 9.57 C
ATOM 17 N3 DI A 1 3.941 12.207 14.300 1.00 9.71 N
ATOM 18 C4 DI A 1 3.800 12.285 15.642 1.00 9.71 C
ATOM 19 P DC A 2 -2.066 10.439 13.693 1.00 12.59 P
ATOM 20 OP1 DC A 2 -2.699 11.021 12.485 1.00 12.94 O
ATOM 21 OP2 DC A 2 -2.831 9.480 14.535 1.00 13.00 O
ATOM 22 O5' DC A 2 -0.623 9.814 13.280 1.00 12.82 O
ATOM 23 C5' DC A 2 0.076 10.149 12.070 1.00 12.47 C
ATOM 24 C4' DC A 2 1.341 9.318 11.934 1.00 12.43 C
ATOM 25 O4' DC A 2 2.285 9.617 12.968 1.00 12.18 O
ATOM 26 C3' DC A 2 1.021 7.827 12.076 1.00 12.58 C
ATOM 27 O3' DC A 2 1.630 7.097 11.017 1.00 13.02 O
ATOM 28 C2' DC A 2 1.701 7.428 13.363 1.00 12.25 C
ATOM 29 C1' DC A 2 2.861 8.386 13.421 1.00 11.96 C
ATOM 30 N1 DC A 2 3.548 8.480 14.737 1.00 11.50 N
ATOM 31 C2 DC A 2 4.940 8.682 14.735 1.00 11.31 C
ATOM 32 O2 DC A 2 5.614 8.710 13.705 1.00 11.17 O
ATOM 33 N3 DC A 2 5.584 8.877 15.911 1.00 11.07 N
ATOM 34 C4 DC A 2 4.895 8.899 17.054 1.00 11.05 C
ATOM 35 N4 DC A 2 5.574 9.170 18.161 1.00 11.06 N
ATOM 36 C5 DC A 2 3.467 8.700 17.095 1.00 11.08 C
ATOM 37 C6 DC A 2 2.844 8.488 15.918 1.00 11.33 C
ATOM 38 P DA A 3 0.803 6.668 9.677 1.00 13.59 P
ATOM 39 OP1 DA A 3 0.055 7.579 8.780 1.00 13.84 O
ATOM 40 OP2 DA A 3 0.148 5.460 10.235 1.00 13.74 O
ATOM 41 O5' DA A 3 2.085 6.131 8.880 1.00 13.34 O
ATOM 42 C5' DA A 3 2.905 6.848 7.990 1.00 12.89 C
ATOM 43 C4' DA A 3 4.155 6.041 7.769 1.00 12.63 C
ATOM 44 O4' DA A 3 4.927 6.025 8.950 1.00 12.46 O
ATOM 45 C3' DA A 3 3.859 4.587 7.472 1.00 12.76 C
ATOM 46 O3' DA A 3 4.612 4.247 6.305 1.00 13.12 O
ATOM 47 C2' DA A 3 4.285 3.844 8.710 1.00 12.50 C
ATOM 48 C1' DA A 3 5.317 4.709 9.350 1.00 12.26 C
ATOM 49 N9 DA A 3 5.185 4.639 10.806 1.00 12.01 N
ATOM 50 C8 DA A 3 4.038 4.821 11.527 1.00 11.98 C
ATOM 51 N7 DA A 3 4.212 4.954 12.813 1.00 12.00 N
ATOM 52 C5 DA A 3 5.592 4.914 12.948 1.00 11.89 C
ATOM 53 C6 DA A 3 6.414 5.086 14.055 1.00 11.73 C
ATOM 54 N6 DA A 3 5.924 5.268 15.283 1.00 11.56 N
ATOM 55 N1 DA A 3 7.736 5.089 13.822 1.00 11.80 N
ATOM 56 C2 DA A 3 8.191 4.830 12.599 1.00 11.78 C
ATOM 57 N3 DA A 3 7.506 4.532 11.506 1.00 11.85 N
ATOM 58 C4 DA A 3 6.189 4.679 11.738 1.00 11.86 C
ATOM 59 P DT A 4 4.688 2.806 5.653 1.00 13.33 P
ATOM 60 OP1 DT A 4 5.337 3.138 4.352 1.00 13.39 O
ATOM 61 OP2 DT A 4 3.361 2.130 5.742 1.00 13.33 O
ATOM 62 O5' DT A 4 5.776 1.930 6.485 1.00 12.90 O
ATOM 63 C5' DT A 4 7.159 2.196 6.282 1.00 12.27 C
ATOM 64 C4' DT A 4 8.037 1.510 7.285 1.00 11.87 C
ATOM 65 O4' DT A 4 7.657 1.991 8.560 1.00 11.72 O
ATOM 66 C3' DT A 4 7.801 0.001 7.291 1.00 11.68 C
ATOM 67 O3' DT A 4 9.013 -0.722 7.275 1.00 11.61 O
ATOM 68 C2' DT A 4 7.194 -0.232 8.605 1.00 11.58 C
ATOM 69 C1' DT A 4 7.798 0.864 9.435 1.00 11.53 C
ATOM 70 N1 DT A 4 7.081 1.006 10.717 1.00 11.35 N
ATOM 71 C2 DT A 4 7.847 1.186 11.863 1.00 11.33 C
ATOM 72 O2 DT A 4 9.083 1.216 11.916 1.00 11.22 O
ATOM 73 N3 DT A 4 7.118 1.323 13.025 1.00 11.27 N
ATOM 74 C4 DT A 4 5.746 1.405 13.145 1.00 11.19 C
ATOM 75 O4 DT A 4 5.270 1.692 14.247 1.00 11.26 O
ATOM 76 C5 DT A 4 5.031 1.166 11.901 1.00 11.07 C
ATOM 77 C7 DT A 4 3.501 1.176 11.833 1.00 10.85 C
ATOM 78 C6 DT A 4 5.708 0.995 10.763 1.00 11.17 C
ATOM 79 P DA A 5 9.542 -1.356 5.900 1.00 11.11 P
ATOM 80 OP1 DA A 5 9.658 -0.444 4.743 1.00 11.04 O
ATOM 81 OP2 DA A 5 8.764 -2.593 5.744 1.00 11.09 O
ATOM 82 O5' DA A 5 10.999 -1.888 6.258 1.00 10.86 O
ATOM 83 C5' DA A 5 12.062 -0.973 6.568 1.00 10.51 C
ATOM 84 C4' DA A 5 12.704 -1.386 7.862 1.00 10.32 C
ATOM 85 O4' DA A 5 11.774 -1.228 8.939 1.00 10.22 O
ATOM 86 C3' DA A 5 13.117 -2.821 7.831 1.00 10.23 C
ATOM 87 O3' DA A 5 14.498 -2.853 8.193 1.00 10.40 O
ATOM 88 C2' DA A 5 12.212 -3.427 8.873 1.00 10.16 C
ATOM 89 C1' DA A 5 11.844 -2.319 9.837 1.00 9.93 C
ATOM 90 N9 DA A 5 10.474 -2.517 10.338 1.00 9.78 N
ATOM 91 C8 DA A 5 9.375 -2.895 9.611 1.00 9.51 C
ATOM 92 N7 DA A 5 8.265 -2.769 10.247 1.00 9.42 N
ATOM 93 C5 DA A 5 8.647 -2.401 11.525 1.00 9.44 C
ATOM 94 C6 DA A 5 7.902 -2.184 12.690 1.00 9.37 C
ATOM 95 N6 DA A 5 6.573 -2.233 12.687 1.00 9.48 N
ATOM 96 N1 DA A 5 8.571 -1.900 13.819 1.00 9.21 N
ATOM 97 C2 DA A 5 9.898 -1.831 13.778 1.00 9.25 C
ATOM 98 N3 DA A 5 10.717 -1.994 12.739 1.00 9.42 N
ATOM 99 C4 DA A 5 10.009 -2.278 11.614 1.00 9.51 C
ATOM 100 P DT A 6 15.387 -4.158 8.088 1.00 10.18 P
ATOM 101 OP1 DT A 6 16.730 -3.582 7.919 1.00 10.59 O
ATOM 102 OP2 DT A 6 14.932 -5.219 7.192 1.00 10.54 O
ATOM 103 O5' DT A 6 15.198 -4.627 9.568 1.00 10.31 O
ATOM 104 C5' DT A 6 15.741 -3.896 10.680 1.00 10.20 C
ATOM 105 C4' DT A 6 15.128 -4.374 11.948 1.00 10.15 C
ATOM 106 O4' DT A 6 13.715 -4.238 11.940 1.00 10.04 O
ATOM 107 C3' DT A 6 15.461 -5.816 12.221 1.00 10.33 C
ATOM 108 O3' DT A 6 16.478 -5.749 13.202 1.00 10.68 O
ATOM 109 C2' DT A 6 14.168 -6.350 12.762 1.00 10.07 C
ATOM 110 C1' DT A 6 13.264 -5.153 12.963 1.00 9.95 C
ATOM 111 N1 DT A 6 11.836 -5.476 12.789 1.00 9.62 N
ATOM 112 C2 DT A 6 10.960 -5.369 13.853 1.00 9.63 C
ATOM 113 O2 DT A 6 11.279 -5.167 15.004 1.00 9.64 O
ATOM 114 N3 DT A 6 9.612 -5.534 13.562 1.00 9.54 N
ATOM 115 C4 DT A 6 9.083 -5.842 12.321 1.00 9.51 C
ATOM 116 O4 DT A 6 7.861 -5.933 12.189 1.00 9.63 O
ATOM 117 C5 DT A 6 10.085 -6.052 11.293 1.00 9.53 C
ATOM 118 C7 DT A 6 9.691 -6.631 9.940 1.00 9.41 C
ATOM 119 C6 DT A 6 11.390 -5.831 11.548 1.00 9.62 C
ATOM 120 P DI A 7 17.189 -7.046 13.846 1.00 11.47 P
ATOM 121 OP1 DI A 7 18.332 -6.368 14.518 1.00 11.77 O
ATOM 122 OP2 DI A 7 17.452 -8.184 12.943 1.00 11.65 O
ATOM 123 O5' DI A 7 16.275 -7.583 15.007 1.00 11.31 O
ATOM 124 C5' DI A 7 16.075 -6.809 16.176 1.00 10.95 C
ATOM 125 C4' DI A 7 14.901 -7.373 16.920 1.00 10.62 C
ATOM 126 O4' DI A 7 13.694 -7.343 16.114 1.00 10.49 O
ATOM 127 C3' DI A 7 15.156 -8.800 17.325 1.00 10.49 C
ATOM 128 O3' DI A 7 14.871 -8.821 18.715 1.00 10.47 O
ATOM 129 C2' DI A 7 14.140 -9.587 16.482 1.00 10.44 C
ATOM 130 C1' DI A 7 12.986 -8.603 16.261 1.00 10.27 C
ATOM 131 N9 DI A 7 12.217 -8.905 15.035 1.00 9.92 N
ATOM 132 C8 DI A 7 12.684 -9.285 13.826 1.00 9.64 C
ATOM 133 N7 DI A 7 11.767 -9.359 12.918 1.00 9.70 N
ATOM 134 C5 DI A 7 10.589 -9.024 13.570 1.00 9.77 C
ATOM 135 C6 DI A 7 9.235 -9.051 13.122 1.00 9.69 C
ATOM 136 O6 DI A 7 8.794 -9.263 12.004 1.00 9.65 O
ATOM 137 N1 DI A 7 8.349 -8.750 14.121 1.00 9.72 N
ATOM 138 C2 DI A 7 8.700 -8.505 15.421 1.00 9.58 C
ATOM 139 N3 DI A 7 9.950 -8.451 15.841 1.00 9.76 N
ATOM 140 C4 DI A 7 10.858 -8.716 14.873 1.00 9.83 C
ATOM 141 P DC A 8 15.111 -10.188 19.490 1.00 10.29 P
ATOM 142 OP1 DC A 8 15.625 -9.741 20.804 1.00 10.47 O
ATOM 143 OP2 DC A 8 15.826 -11.233 18.712 1.00 10.33 O
ATOM 144 O5' DC A 8 13.583 -10.714 19.665 1.00 9.83 O
ATOM 145 C5' DC A 8 12.578 -10.208 20.515 1.00 9.09 C
ATOM 146 C4' DC A 8 11.333 -10.981 20.201 1.00 8.78 C
ATOM 147 O4' DC A 8 11.051 -10.916 18.811 1.00 8.49 O
ATOM 148 C3' DC A 8 11.449 -12.466 20.508 1.00 8.68 C
ATOM 149 O3' DC A 8 10.608 -12.765 21.619 1.00 8.83 O
ATOM 150 C2' DC A 8 10.914 -13.154 19.254 1.00 8.48 C
ATOM 151 C1' DC A 8 10.222 -12.046 18.506 1.00 8.23 C
ATOM 152 N1 DC A 8 10.246 -12.277 17.063 1.00 7.88 N
ATOM 153 C2 DC A 8 9.040 -12.225 16.418 1.00 7.67 C
ATOM 154 O2 DC A 8 7.979 -12.090 17.013 1.00 8.04 O
ATOM 155 N3 DC A 8 9.013 -12.289 15.076 1.00 7.35 N
ATOM 156 C4 DC A 8 10.119 -12.322 14.362 1.00 7.01 C
ATOM 157 N4 DC A 8 9.959 -12.389 13.048 1.00 6.66 N
ATOM 158 C5 DC A 8 11.417 -12.270 14.984 1.00 7.21 C
ATOM 159 C6 DC A 8 11.433 -12.241 16.332 1.00 7.63 C
TER 160 DC A 8
HETATM 161 C1 DMY A 9 10.502 -2.970 20.237 1.00 11.49 C
HETATM 162 O1 DMY A 9 11.102 -3.049 21.312 1.00 11.77 O
HETATM 163 N1 DMY A 9 10.868 -2.303 19.131 1.00 11.24 N
HETATM 164 C2 DMY A 9 12.018 -1.631 19.028 1.00 10.98 C
HETATM 165 C3 DMY A 9 12.429 -0.903 17.927 1.00 10.95 C
HETATM 166 C4 DMY A 9 13.698 -0.412 18.137 1.00 10.86 C
HETATM 167 N2 DMY A 9 14.128 -0.886 19.343 1.00 10.98 N
HETATM 168 C5 DMY A 9 13.147 -1.611 19.907 1.00 10.96 C
HETATM 169 C6 DMY A 9 15.494 -0.751 20.031 1.00 10.83 C
HETATM 170 C7 DMY A 9 14.475 0.437 17.260 1.00 10.75 C
HETATM 171 O2 DMY A 9 15.687 0.577 17.404 1.00 10.97 O
HETATM 172 N3 DMY A 9 13.749 1.104 16.333 1.00 10.57 N
HETATM 173 C8 DMY A 9 14.285 1.718 15.256 1.00 10.29 C
HETATM 174 C9 DMY A 9 13.583 2.409 14.291 1.00 10.22 C
HETATM 175 C10 DMY A 9 14.488 3.034 13.451 1.00 10.16 C
HETATM 176 N4 DMY A 9 15.735 2.688 13.824 1.00 10.18 N
HETATM 177 C11 DMY A 9 15.653 1.891 14.892 1.00 10.25 C
HETATM 178 C12 DMY A 9 17.095 2.998 13.157 1.00 10.16 C
HETATM 179 C13 DMY A 9 14.205 3.852 12.303 1.00 10.18 C
HETATM 180 O3 DMY A 9 14.992 3.980 11.362 1.00 10.28 O
HETATM 181 N5 DMY A 9 13.015 4.490 12.374 1.00 10.12 N
HETATM 182 C14 DMY A 9 12.492 5.181 11.332 1.00 10.02 C
HETATM 183 C15 DMY A 9 11.299 5.866 11.314 1.00 10.04 C
HETATM 184 C16 DMY A 9 11.171 6.517 10.103 1.00 10.09 C
HETATM 185 N6 DMY A 9 12.239 6.202 9.336 1.00 10.03 N
HETATM 186 C17 DMY A 9 13.042 5.416 10.043 1.00 9.99 C
HETATM 187 C18 DMY A 9 12.559 6.509 7.869 1.00 9.95 C
HETATM 188 C19 DMY A 9 10.069 7.314 9.653 1.00 10.17 C
HETATM 189 O4 DMY A 9 9.665 7.305 8.493 1.00 10.34 O
HETATM 190 N7 DMY A 9 9.488 8.097 10.571 1.00 10.20 N
HETATM 191 C20 DMY A 9 8.373 8.970 10.215 1.00 10.18 C
HETATM 192 C21 DMY A 9 6.983 8.350 10.344 1.00 10.22 C
HETATM 193 C22 DMY A 9 5.864 9.231 9.794 1.00 10.10 C
HETATM 194 N8 DMY A 9 5.648 9.480 8.515 1.00 9.97 N
HETATM 195 N9 DMY A 9 5.071 9.781 10.685 1.00 10.21 N
HETATM 196 MG MG A 10 14.000 -6.582 6.028 1.00 15.97 MG
HETATM 197 O HOH A 11 15.235 -7.837 6.773 1.00 7.45 O
HETATM 198 O HOH A 12 5.441 12.184 20.318 1.00 9.68 O
HETATM 199 O HOH A 13 12.736 -6.930 7.718 1.00 11.07 O
HETATM 200 O HOH A 14 14.900 -5.863 4.343 1.00 12.67 O
HETATM 201 O HOH A 15 1.372 14.953 19.381 1.00 12.97 O
HETATM 202 O HOH A 16 3.479 15.797 18.000 1.00 13.89 O
HETATM 203 O HOH A 17 9.702 -4.902 6.347 1.00 14.47 O
HETATM 204 O HOH A 18 6.232 -3.062 5.632 1.00 14.64 O
HETATM 205 O HOH A 19 -2.063 9.965 18.741 1.00 22.70 O
HETATM 206 O HOH A 20 8.155 13.091 19.457 1.00 22.84 O
HETATM 207 O HOH A 21 2.889 1.979 15.847 1.00 27.17 O
HETATM 208 O HOH A 22 13.571 -8.201 10.126 1.00 27.34 O
HETATM 209 O HOH A 23 -3.063 13.165 20.699 1.00 28.32 O
HETATM 210 O HOH A 24 18.331 0.767 17.298 1.00 29.30 O
HETATM 211 O HOH A 25 5.967 6.068 18.894 1.00 29.77 O
HETATM 212 O HOH A 26 13.129 -12.353 12.213 1.00 31.19 O
HETATM 213 O HOH A 27 9.840 -10.995 9.679 1.00 31.93 O
HETATM 214 O HOH A 28 4.410 -2.511 10.802 1.00 31.97 O
HETATM 215 O HOH A 29 15.648 -14.143 20.254 1.00 33.26 O
HETATM 216 O HOH A 30 0.306 7.250 17.207 1.00 33.83 O
HETATM 217 O HOH A 31 -4.771 12.843 12.907 1.00 33.93 O
HETATM 218 O HOH A 32 16.381 -8.114 9.366 1.00 38.75 O
HETATM 219 O HOH A 33 -2.905 7.795 10.372 1.00 40.38 O
HETATM 220 O HOH A 34 22.431 1.468 19.506 1.00 41.29 O
HETATM 221 O HOH A 35 12.627 -11.417 8.435 1.00 41.70 O
HETATM 222 O HOH A 36 3.667 -0.049 8.818 1.00 42.51 O
HETATM 223 O HOH A 37 17.173 -1.099 6.477 1.00 42.96 O
HETATM 224 O HOH A 38 -4.938 8.624 12.120 1.00 45.74 O
HETATM 225 O HOH A 39 19.848 -10.143 19.743 1.00 46.12 O
HETATM 226 O HOH A 40 19.359 1.226 19.852 1.00 46.94 O
HETATM 227 O HOH A 41 0.639 2.155 7.171 1.00 47.29 O
HETATM 228 O HOH A 42 8.062 -9.645 8.093 1.00 47.46 O
HETATM 229 O HOH A 43 15.777 -11.396 12.858 1.00 48.74 O
HETATM 230 O HOH A 44 2.968 4.994 16.003 1.00 49.04 O
HETATM 231 O HOH A 45 -1.581 15.786 20.742 1.00 49.01 O
HETATM 232 O HOH A 46 18.116 -10.278 9.329 1.00 50.96 O
HETATM 233 O HOH A 47 -2.433 7.436 16.718 1.00 52.79 O
HETATM 234 O HOH A 48 0.539 4.121 12.922 1.00 56.68 O
HETATM 235 O HOH A 49 1.170 2.905 10.004 1.00 57.86 O
HETATM 236 O HOH A 50 8.533 5.702 6.442 1.00 66.74 O
CONECT 102 196
CONECT 161 162 163
CONECT 162 161
CONECT 163 161 164
CONECT 164 163 165 168
CONECT 165 164 166
CONECT 166 165 167 170
CONECT 167 166 168 169
CONECT 168 164 167
CONECT 169 167
CONECT 170 166 171 172
CONECT 171 170
CONECT 172 170 173
CONECT 173 172 174 177
CONECT 174 173 175
CONECT 175 174 176 179
CONECT 176 175 177 178
CONECT 177 173 176
CONECT 178 176
CONECT 179 175 180 181
CONECT 180 179
CONECT 181 179 182
CONECT 182 181 183 186
CONECT 183 182 184
CONECT 184 183 185 188
CONECT 185 184 186 187
CONECT 186 182 185
CONECT 187 185
CONECT 188 184 189 190
CONECT 189 188
CONECT 190 188 191
CONECT 191 190 192
CONECT 192 191 193
CONECT 193 192 194 195
CONECT 194 193
CONECT 195 193
CONECT 196 102 197 199 200
CONECT 197 196
CONECT 199 196
CONECT 200 196
MASTER 321 0 2 0 0 0 5 6 235 1 40 1
END