data_2VAZ
#
_entry.id 2VAZ
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.391
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2VAZ pdb_00002vaz 10.2210/pdb2vaz/pdb
PDBE EBI-33682 ? ?
WWPDB D_1290033682 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2007-10-02
2 'Structure model' 1 1 2012-11-14
3 'Structure model' 1 2 2017-08-02
4 'Structure model' 1 3 2024-05-08
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' Other
2 2 'Structure model' 'Version format compliance'
3 3 'Structure model' 'Data collection'
4 4 'Structure model' 'Data collection'
5 4 'Structure model' 'Database references'
6 4 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' em_imaging
2 3 'Structure model' em_software
3 4 'Structure model' chem_comp_atom
4 4 'Structure model' chem_comp_bond
5 4 'Structure model' database_2
6 4 'Structure model' em_3d_fitting_list
7 4 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_em_imaging.nominal_defocus_max'
2 3 'Structure model' '_em_imaging.nominal_defocus_min'
3 3 'Structure model' '_em_software.fitting_id'
4 3 'Structure model' '_em_software.image_processing_id'
5 3 'Structure model' '_em_software.name'
6 4 'Structure model' '_database_2.pdbx_DOI'
7 4 'Structure model' '_database_2.pdbx_database_accession'
8 4 'Structure model' '_em_3d_fitting_list.accession_code'
9 4 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id'
10 4 'Structure model' '_em_3d_fitting_list.source_name'
11 4 'Structure model' '_em_3d_fitting_list.type'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2VAZ
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.SG_entry .
_pdbx_database_status.recvd_initial_deposition_date 2007-09-05
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.content_type
_pdbx_database_related.details
EMDB EMD-1391 'associated EM volume'
'STRUCTURED MRNAS REGULATE TRANSLATION INITIATION BY BINDING TO A DEDICATED SITE ON THE RIBOSOME.'
PDB 1P6G unspecified
;REAL SPACE REFINED COORDINATES OF THE 30S SUBUNIT FITTEDINTO THE LOW RESOLUTION CRYO- EM MAP OF THE EF-G.GTP STATE OF E. COLI 70S RIBOSOME
;
PDB 1P87 unspecified
;REAL SPACE REFINED COORDINATES OF THE 30S SUBUNIT FITTEDINTO THE LOW RESOLUTION CRYO- EM MAP OF THE INITIATION-LIKESTATE OF E. COLI 70S RIBOSOME
;
PDB 2AVY unspecified
;CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROMESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF ONE 70S RIBOSOME. THE ENTIRE CRYSTALSTRUCTURE CONTAINS TWO 70S RIBOSOMES AND IS DESCRIBED INREMARK 400.
;
PDB 2AW7 unspecified
;CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOME FROMESCHERICHIA COLI AT 3.5 A RESOLUTION. THIS FILE CONTAINS THE 30S SUBUNIT OF THE SECOND 70S RIBOSOME. THE ENTIRECRYSTAL STRUCTURE CONTAINS TWO 70S RIBOSOMES AND ISDESCRIBED IN REMARK 400.
;
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Marzi, S.' 1
'Myasnikov, A.G.' 2
'Serganov, A.' 3
'Ehresmann, C.' 4
'Romby, P.' 5
'Yusupov, M.' 6
'Klaholz, B.P.' 7
#
_citation.id primary
_citation.title 'Structured Mrnas Regulate Translation Initiation by Binding to the Platform of the Ribosome.'
_citation.journal_abbrev 'Cell(Cambridge,Mass.)'
_citation.journal_volume 130
_citation.page_first 1019
_citation.page_last ?
_citation.year 2007
_citation.journal_id_ASTM CELLB5
_citation.country US
_citation.journal_id_ISSN 0092-8674
_citation.journal_id_CSD 0998
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 17889647
_citation.pdbx_database_id_DOI 10.1016/J.CELL.2007.07.008
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Marzi, S.' 1 ?
primary 'Myasnikov, A.G.' 2 ?
primary 'Serganov, A.' 3 ?
primary 'Ehresmann, C.' 4 ?
primary 'Romby, P.' 5 ?
primary 'Yusupov, M.' 6 ?
primary 'Klaholz, B.P.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn 'RPSO MRNA OPERATOR' 59427.113 1 ? ? 'HAIRPIN LOOP DOMAIN I AND PSEUDOKNOT' ?
2 polymer man '30S RIBOSOMAL PROTEIN S15' 10290.816 1 ? ? ? ?
#
_entity_name_com.entity_id 2
_entity_name_com.name 'REPRESSOR S15'
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 polyribonucleotide no no
;GGGCGAAUUCGAGCUCGGUACCCAACGUCGCGUAAAUUGUUUAACACUUUGCGUAACGUACACUGGGAUCGCUGAAUUAG
AGAUCGGCGUCCUUUCAUUCUAUAUACUAAGGAGGUUAAAAUGUCUCUAAGUACUGAAGCAACAGCUAAAAUCGUUUCUG
AGUUUGGUCGACCUGCAGGCAUGCA
;
;GGGCGAAUUCGAGCUCGGUACCCAACGUCGCGUAAAUUGUUUAACACUUUGCGUAACGUACACUGGGAUCGCUGAAUUAG
AGAUCGGCGUCCUUUCAUUCUAUAUACUAAGGAGGUUAAAAUGUCUCUAAGUACUGAAGCAACAGCUAAAAUCGUUUCUG
AGUUUGGUCGACCUGCAGGCAUGCA
;
A ?
2 'polypeptide(L)' no no
;MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQ
LIERLGLRR
;
;MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQ
LIERLGLRR
;
F ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 G n
1 2 G n
1 3 G n
1 4 C n
1 5 G n
1 6 A n
1 7 A n
1 8 U n
1 9 U n
1 10 C n
1 11 G n
1 12 A n
1 13 G n
1 14 C n
1 15 U n
1 16 C n
1 17 G n
1 18 G n
1 19 U n
1 20 A n
1 21 C n
1 22 C n
1 23 C n
1 24 A n
1 25 A n
1 26 C n
1 27 G n
1 28 U n
1 29 C n
1 30 G n
1 31 C n
1 32 G n
1 33 U n
1 34 A n
1 35 A n
1 36 A n
1 37 U n
1 38 U n
1 39 G n
1 40 U n
1 41 U n
1 42 U n
1 43 A n
1 44 A n
1 45 C n
1 46 A n
1 47 C n
1 48 U n
1 49 U n
1 50 U n
1 51 G n
1 52 C n
1 53 G n
1 54 U n
1 55 A n
1 56 A n
1 57 C n
1 58 G n
1 59 U n
1 60 A n
1 61 C n
1 62 A n
1 63 C n
1 64 U n
1 65 G n
1 66 G n
1 67 G n
1 68 A n
1 69 U n
1 70 C n
1 71 G n
1 72 C n
1 73 U n
1 74 G n
1 75 A n
1 76 A n
1 77 U n
1 78 U n
1 79 A n
1 80 G n
1 81 A n
1 82 G n
1 83 A n
1 84 U n
1 85 C n
1 86 G n
1 87 G n
1 88 C n
1 89 G n
1 90 U n
1 91 C n
1 92 C n
1 93 U n
1 94 U n
1 95 U n
1 96 C n
1 97 A n
1 98 U n
1 99 U n
1 100 C n
1 101 U n
1 102 A n
1 103 U n
1 104 A n
1 105 U n
1 106 A n
1 107 C n
1 108 U n
1 109 A n
1 110 A n
1 111 G n
1 112 G n
1 113 A n
1 114 G n
1 115 G n
1 116 U n
1 117 U n
1 118 A n
1 119 A n
1 120 A n
1 121 A n
1 122 U n
1 123 G n
1 124 U n
1 125 C n
1 126 U n
1 127 C n
1 128 U n
1 129 A n
1 130 A n
1 131 G n
1 132 U n
1 133 A n
1 134 C n
1 135 U n
1 136 G n
1 137 A n
1 138 A n
1 139 G n
1 140 C n
1 141 A n
1 142 A n
1 143 C n
1 144 A n
1 145 G n
1 146 C n
1 147 U n
1 148 A n
1 149 A n
1 150 A n
1 151 A n
1 152 U n
1 153 C n
1 154 G n
1 155 U n
1 156 U n
1 157 U n
1 158 C n
1 159 U n
1 160 G n
1 161 A n
1 162 G n
1 163 U n
1 164 U n
1 165 U n
1 166 G n
1 167 G n
1 168 U n
1 169 C n
1 170 G n
1 171 A n
1 172 C n
1 173 C n
1 174 U n
1 175 G n
1 176 C n
1 177 A n
1 178 G n
1 179 G n
1 180 C n
1 181 A n
1 182 U n
1 183 G n
1 184 C n
1 185 A n
2 1 MET n
2 2 SER n
2 3 LEU n
2 4 SER n
2 5 THR n
2 6 GLU n
2 7 ALA n
2 8 THR n
2 9 ALA n
2 10 LYS n
2 11 ILE n
2 12 VAL n
2 13 SER n
2 14 GLU n
2 15 PHE n
2 16 GLY n
2 17 ARG n
2 18 ASP n
2 19 ALA n
2 20 ASN n
2 21 ASP n
2 22 THR n
2 23 GLY n
2 24 SER n
2 25 THR n
2 26 GLU n
2 27 VAL n
2 28 GLN n
2 29 VAL n
2 30 ALA n
2 31 LEU n
2 32 LEU n
2 33 THR n
2 34 ALA n
2 35 GLN n
2 36 ILE n
2 37 ASN n
2 38 HIS n
2 39 LEU n
2 40 GLN n
2 41 GLY n
2 42 HIS n
2 43 PHE n
2 44 ALA n
2 45 GLU n
2 46 HIS n
2 47 LYS n
2 48 LYS n
2 49 ASP n
2 50 HIS n
2 51 HIS n
2 52 SER n
2 53 ARG n
2 54 ARG n
2 55 GLY n
2 56 LEU n
2 57 LEU n
2 58 ARG n
2 59 MET n
2 60 VAL n
2 61 SER n
2 62 GLN n
2 63 ARG n
2 64 ARG n
2 65 LYS n
2 66 LEU n
2 67 LEU n
2 68 ASP n
2 69 TYR n
2 70 LEU n
2 71 LYS n
2 72 ARG n
2 73 LYS n
2 74 ASP n
2 75 VAL n
2 76 ALA n
2 77 ARG n
2 78 TYR n
2 79 THR n
2 80 GLN n
2 81 LEU n
2 82 ILE n
2 83 GLU n
2 84 ARG n
2 85 LEU n
2 86 GLY n
2 87 LEU n
2 88 ARG n
2 89 ARG n
#
_entity_src_gen.entity_id 2
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21(DE3)'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name PET11C
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific 'ESCHERICHIA COLI'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 562
_pdbx_entity_src_syn.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197
G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 G 1 -15 ? ? ? A . n
A 1 2 G 2 -14 ? ? ? A . n
A 1 3 G 3 -13 ? ? ? A . n
A 1 4 C 4 -12 ? ? ? A . n
A 1 5 G 5 -11 ? ? ? A . n
A 1 6 A 6 -10 ? ? ? A . n
A 1 7 A 7 -9 ? ? ? A . n
A 1 8 U 8 -8 ? ? ? A . n
A 1 9 U 9 -7 ? ? ? A . n
A 1 10 C 10 -6 ? ? ? A . n
A 1 11 G 11 -5 ? ? ? A . n
A 1 12 A 12 -4 ? ? ? A . n
A 1 13 G 13 -3 ? ? ? A . n
A 1 14 C 14 -2 ? ? ? A . n
A 1 15 U 15 -1 ? ? ? A . n
A 1 16 C 16 0 ? ? ? A . n
A 1 17 G 17 1 ? ? ? A . n
A 1 18 G 18 2 ? ? ? A . n
A 1 19 U 19 3 ? ? ? A . n
A 1 20 A 20 4 ? ? ? A . n
A 1 21 C 21 5 ? ? ? A . n
A 1 22 C 22 6 ? ? ? A . n
A 1 23 C 23 7 ? ? ? A . n
A 1 24 A 24 8 ? ? ? A . n
A 1 25 A 25 9 9 A A A . n
A 1 26 C 26 10 10 C C A . n
A 1 27 G 27 11 11 G G A . n
A 1 28 U 28 12 12 U U A . n
A 1 29 C 29 13 13 C C A . n
A 1 30 G 30 14 14 G G A . n
A 1 31 C 31 15 15 C C A . n
A 1 32 G 32 16 16 G G A . n
A 1 33 U 33 17 17 U U A . n
A 1 34 A 34 18 18 A A A . n
A 1 35 A 35 19 19 A A A . n
A 1 36 A 36 20 20 A A A . n
A 1 37 U 37 21 21 U U A . n
A 1 38 U 38 22 22 U U A . n
A 1 39 G 39 23 23 G G A . n
A 1 40 U 40 24 24 U U A . n
A 1 41 U 41 25 25 U U A . n
A 1 42 U 42 26 26 U U A . n
A 1 43 A 43 27 27 A A A . n
A 1 44 A 44 28 28 A A A . n
A 1 45 C 45 29 29 C C A . n
A 1 46 A 46 30 30 A A A . n
A 1 47 C 47 31 31 C C A . n
A 1 48 U 48 32 32 U U A . n
A 1 49 U 49 33 33 U U A . n
A 1 50 U 50 34 34 U U A . n
A 1 51 G 51 35 35 G G A . n
A 1 52 C 52 36 36 C C A . n
A 1 53 G 53 37 37 G G A . n
A 1 54 U 54 38 38 U U A . n
A 1 55 A 55 39 39 A A A . n
A 1 56 A 56 40 40 A A A . n
A 1 57 C 57 41 41 C C A . n
A 1 58 G 58 42 42 G G A . n
A 1 59 U 59 43 43 U U A . n
A 1 60 A 60 44 44 A A A . n
A 1 61 C 61 45 45 C C A . n
A 1 62 A 62 46 46 A A A . n
A 1 63 C 63 47 47 C C A . n
A 1 64 U 64 48 48 U U A . n
A 1 65 G 65 49 49 G G A . n
A 1 66 G 66 50 50 G G A . n
A 1 67 G 67 51 51 G G A . n
A 1 68 A 68 52 52 A A A . n
A 1 69 U 69 53 53 U U A . n
A 1 70 C 70 54 54 C C A . n
A 1 71 G 71 55 55 G G A . n
A 1 72 C 72 56 56 C C A . n
A 1 73 U 73 57 57 U U A . n
A 1 74 G 74 58 58 G G A . n
A 1 75 A 75 59 59 A A A . n
A 1 76 A 76 60 60 A A A . n
A 1 77 U 77 61 61 U U A . n
A 1 78 U 78 62 62 U U A . n
A 1 79 A 79 63 63 A A A . n
A 1 80 G 80 64 64 G G A . n
A 1 81 A 81 65 65 A A A . n
A 1 82 G 82 66 66 G G A . n
A 1 83 A 83 67 67 A A A . n
A 1 84 U 84 68 68 U U A . n
A 1 85 C 85 69 69 C C A . n
A 1 86 G 86 70 70 G G A . n
A 1 87 G 87 71 71 G G A . n
A 1 88 C 88 72 72 C C A . n
A 1 89 G 89 73 73 G G A . n
A 1 90 U 90 74 74 U U A . n
A 1 91 C 91 75 75 C C A . n
A 1 92 C 92 76 ? ? ? A . n
A 1 93 U 93 77 ? ? ? A . n
A 1 94 U 94 78 ? ? ? A . n
A 1 95 U 95 79 ? ? ? A . n
A 1 96 C 96 80 ? ? ? A . n
A 1 97 A 97 81 ? ? ? A . n
A 1 98 U 98 82 ? ? ? A . n
A 1 99 U 99 83 ? ? ? A . n
A 1 100 C 100 84 ? ? ? A . n
A 1 101 U 101 85 ? ? ? A . n
A 1 102 A 102 86 ? ? ? A . n
A 1 103 U 103 87 ? ? ? A . n
A 1 104 A 104 88 ? ? ? A . n
A 1 105 U 105 89 ? ? ? A . n
A 1 106 A 106 90 ? ? ? A . n
A 1 107 C 107 91 ? ? ? A . n
A 1 108 U 108 92 92 U U A . n
A 1 109 A 109 93 93 A A A . n
A 1 110 A 110 94 94 A A A . n
A 1 111 G 111 95 95 G G A . n
A 1 112 G 112 96 96 G G A . n
A 1 113 A 113 97 97 A A A . n
A 1 114 G 114 98 98 G G A . n
A 1 115 G 115 99 99 G G A . n
A 1 116 U 116 100 100 U U A . n
A 1 117 U 117 101 ? ? ? A . n
A 1 118 A 118 102 ? ? ? A . n
A 1 119 A 119 103 ? ? ? A . n
A 1 120 A 120 104 ? ? ? A . n
A 1 121 A 121 105 ? ? ? A . n
A 1 122 U 122 106 ? ? ? A . n
A 1 123 G 123 107 ? ? ? A . n
A 1 124 U 124 108 ? ? ? A . n
A 1 125 C 125 109 109 C C A . n
A 1 126 U 126 110 110 U U A . n
A 1 127 C 127 111 111 C C A . n
A 1 128 U 128 112 112 U U A . n
A 1 129 A 129 113 113 A A A . n
A 1 130 A 130 114 114 A A A . n
A 1 131 G 131 115 ? ? ? A . n
A 1 132 U 132 116 ? ? ? A . n
A 1 133 A 133 117 ? ? ? A . n
A 1 134 C 134 118 ? ? ? A . n
A 1 135 U 135 119 ? ? ? A . n
A 1 136 G 136 120 ? ? ? A . n
A 1 137 A 137 121 ? ? ? A . n
A 1 138 A 138 122 ? ? ? A . n
A 1 139 G 139 123 ? ? ? A . n
A 1 140 C 140 124 ? ? ? A . n
A 1 141 A 141 125 ? ? ? A . n
A 1 142 A 142 126 ? ? ? A . n
A 1 143 C 143 127 ? ? ? A . n
A 1 144 A 144 128 ? ? ? A . n
A 1 145 G 145 129 ? ? ? A . n
A 1 146 C 146 130 ? ? ? A . n
A 1 147 U 147 131 ? ? ? A . n
A 1 148 A 148 132 ? ? ? A . n
A 1 149 A 149 133 ? ? ? A . n
A 1 150 A 150 134 ? ? ? A . n
A 1 151 A 151 135 ? ? ? A . n
A 1 152 U 152 136 ? ? ? A . n
A 1 153 C 153 137 ? ? ? A . n
A 1 154 G 154 138 ? ? ? A . n
A 1 155 U 155 139 ? ? ? A . n
A 1 156 U 156 140 ? ? ? A . n
A 1 157 U 157 141 ? ? ? A . n
A 1 158 C 158 142 ? ? ? A . n
A 1 159 U 159 143 ? ? ? A . n
A 1 160 G 160 144 ? ? ? A . n
A 1 161 A 161 145 ? ? ? A . n
A 1 162 G 162 146 ? ? ? A . n
A 1 163 U 163 147 ? ? ? A . n
A 1 164 U 164 148 ? ? ? A . n
A 1 165 U 165 149 ? ? ? A . n
A 1 166 G 166 150 ? ? ? A . n
A 1 167 G 167 151 ? ? ? A . n
A 1 168 U 168 152 ? ? ? A . n
A 1 169 C 169 153 ? ? ? A . n
A 1 170 G 170 154 ? ? ? A . n
A 1 171 A 171 155 ? ? ? A . n
A 1 172 C 172 156 ? ? ? A . n
A 1 173 C 173 157 ? ? ? A . n
A 1 174 U 174 158 ? ? ? A . n
A 1 175 G 175 159 ? ? ? A . n
A 1 176 C 176 160 ? ? ? A . n
A 1 177 A 177 161 ? ? ? A . n
A 1 178 G 178 162 ? ? ? A . n
A 1 179 G 179 163 ? ? ? A . n
A 1 180 C 180 164 ? ? ? A . n
A 1 181 A 181 165 ? ? ? A . n
A 1 182 U 182 166 ? ? ? A . n
A 1 183 G 183 167 ? ? ? A . n
A 1 184 C 184 168 ? ? ? A . n
A 1 185 A 185 169 ? ? ? A . n
B 2 1 MET 1 100 ? ? ? F . n
B 2 2 SER 2 101 101 SER SER F . n
B 2 3 LEU 3 102 102 LEU LEU F . n
B 2 4 SER 4 103 103 SER SER F . n
B 2 5 THR 5 104 104 THR THR F . n
B 2 6 GLU 6 105 105 GLU GLU F . n
B 2 7 ALA 7 106 106 ALA ALA F . n
B 2 8 THR 8 107 107 THR THR F . n
B 2 9 ALA 9 108 108 ALA ALA F . n
B 2 10 LYS 10 109 109 LYS LYS F . n
B 2 11 ILE 11 110 110 ILE ILE F . n
B 2 12 VAL 12 111 111 VAL VAL F . n
B 2 13 SER 13 112 112 SER SER F . n
B 2 14 GLU 14 113 113 GLU GLU F . n
B 2 15 PHE 15 114 114 PHE PHE F . n
B 2 16 GLY 16 115 115 GLY GLY F . n
B 2 17 ARG 17 116 116 ARG ARG F . n
B 2 18 ASP 18 117 117 ASP ASP F . n
B 2 19 ALA 19 118 118 ALA ALA F . n
B 2 20 ASN 20 119 119 ASN ASN F . n
B 2 21 ASP 21 120 120 ASP ASP F . n
B 2 22 THR 22 121 121 THR THR F . n
B 2 23 GLY 23 122 122 GLY GLY F . n
B 2 24 SER 24 123 123 SER SER F . n
B 2 25 THR 25 124 124 THR THR F . n
B 2 26 GLU 26 125 125 GLU GLU F . n
B 2 27 VAL 27 126 126 VAL VAL F . n
B 2 28 GLN 28 127 127 GLN GLN F . n
B 2 29 VAL 29 128 128 VAL VAL F . n
B 2 30 ALA 30 129 129 ALA ALA F . n
B 2 31 LEU 31 130 130 LEU LEU F . n
B 2 32 LEU 32 131 131 LEU LEU F . n
B 2 33 THR 33 132 132 THR THR F . n
B 2 34 ALA 34 133 133 ALA ALA F . n
B 2 35 GLN 35 134 134 GLN GLN F . n
B 2 36 ILE 36 135 135 ILE ILE F . n
B 2 37 ASN 37 136 136 ASN ASN F . n
B 2 38 HIS 38 137 137 HIS HIS F . n
B 2 39 LEU 39 138 138 LEU LEU F . n
B 2 40 GLN 40 139 139 GLN GLN F . n
B 2 41 GLY 41 140 140 GLY GLY F . n
B 2 42 HIS 42 141 141 HIS HIS F . n
B 2 43 PHE 43 142 142 PHE PHE F . n
B 2 44 ALA 44 143 143 ALA ALA F . n
B 2 45 GLU 45 144 144 GLU GLU F . n
B 2 46 HIS 46 145 145 HIS HIS F . n
B 2 47 LYS 47 146 146 LYS LYS F . n
B 2 48 LYS 48 147 147 LYS LYS F . n
B 2 49 ASP 49 148 148 ASP ASP F . n
B 2 50 HIS 50 149 149 HIS HIS F . n
B 2 51 HIS 51 150 150 HIS HIS F . n
B 2 52 SER 52 151 151 SER SER F . n
B 2 53 ARG 53 152 152 ARG ARG F . n
B 2 54 ARG 54 153 153 ARG ARG F . n
B 2 55 GLY 55 154 154 GLY GLY F . n
B 2 56 LEU 56 155 155 LEU LEU F . n
B 2 57 LEU 57 156 156 LEU LEU F . n
B 2 58 ARG 58 157 157 ARG ARG F . n
B 2 59 MET 59 158 158 MET MET F . n
B 2 60 VAL 60 159 159 VAL VAL F . n
B 2 61 SER 61 160 160 SER SER F . n
B 2 62 GLN 62 161 161 GLN GLN F . n
B 2 63 ARG 63 162 162 ARG ARG F . n
B 2 64 ARG 64 163 163 ARG ARG F . n
B 2 65 LYS 65 164 164 LYS LYS F . n
B 2 66 LEU 66 165 165 LEU LEU F . n
B 2 67 LEU 67 166 166 LEU LEU F . n
B 2 68 ASP 68 167 167 ASP ASP F . n
B 2 69 TYR 69 168 168 TYR TYR F . n
B 2 70 LEU 70 169 169 LEU LEU F . n
B 2 71 LYS 71 170 170 LYS LYS F . n
B 2 72 ARG 72 171 171 ARG ARG F . n
B 2 73 LYS 73 172 172 LYS LYS F . n
B 2 74 ASP 74 173 173 ASP ASP F . n
B 2 75 VAL 75 174 174 VAL VAL F . n
B 2 76 ALA 76 175 175 ALA ALA F . n
B 2 77 ARG 77 176 176 ARG ARG F . n
B 2 78 TYR 78 177 177 TYR TYR F . n
B 2 79 THR 79 178 178 THR THR F . n
B 2 80 GLN 80 179 179 GLN GLN F . n
B 2 81 LEU 81 180 180 LEU LEU F . n
B 2 82 ILE 82 181 181 ILE ILE F . n
B 2 83 GLU 83 182 182 GLU GLU F . n
B 2 84 ARG 84 183 183 ARG ARG F . n
B 2 85 LEU 85 184 184 LEU LEU F . n
B 2 86 GLY 86 185 185 GLY GLY F . n
B 2 87 LEU 87 186 186 LEU LEU F . n
B 2 88 ARG 88 187 ? ? ? F . n
B 2 89 ARG 89 188 ? ? ? F . n
#
_cell.entry_id 2VAZ
_cell.length_a 1.000
_cell.length_b 1.000
_cell.length_c 1.000
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 1
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 2VAZ
_symmetry.space_group_name_H-M 'P 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 1
#
_exptl.entry_id 2VAZ
_exptl.method 'ELECTRON MICROSCOPY'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
#
_diffrn.id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type ?
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_refine.pdbx_refine_id 'ELECTRON MICROSCOPY'
_refine.entry_id 2VAZ
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs ?
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low ?
_refine.ls_d_res_high 10.00
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 86
_refine_hist.pdbx_number_atoms_nucleic_acid 82
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 0
_refine_hist.number_atoms_total 168
_refine_hist.d_res_high 10.00
_refine_hist.d_res_low .
#
_database_PDB_matrix.entry_id 2VAZ
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 2VAZ
_struct.title 'Model of the S15-mRNA complex fitted into the cryo-EM map of the 70S entrapment complex.'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details 'P ATOMS ONLY, CHAIN A ; CA ATOMS ONLY, CHAIN F'
#
_struct_keywords.entry_id 2VAZ
_struct_keywords.pdbx_keywords TRANSLATION
_struct_keywords.text
;TRANSLATION, PLATFORM-BINDING CENTER, GENE EXPRESSION REGULATION, RIBOSOMAL PROTEIN, RIBONUCLEOPROTEIN, PROTEIN SYNTHESIS, TRANSLATION INITIATION, RIBOSOME, RIBOSWITCH, RNA-BINDING, RRNA-BINDING, RNA PSEUDOKNOT, MRNA STRUCTURE, REPRESSOR PROTEIN
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
1 PDB 2VAZ 1 ? ? 2VAZ ?
2 PDB 2VAZ 2 ? ? 2VAZ ?
3 UNP RS15_ECOLI 2 ? ? P0ADZ4 ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 2VAZ A 1 ? 185 ? 2VAZ -15 ? 169 ? -15 169
2 2 2VAZ F 1 ? 1 ? 2VAZ 100 ? 100 ? 100 100
3 3 2VAZ F 2 ? 89 ? P0ADZ4 1 ? 88 ? 101 188
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PQS
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_em_3d_fitting.id 1
_em_3d_fitting.entry_id 2VAZ
_em_3d_fitting.ref_protocol OTHER
_em_3d_fitting.ref_space REAL
_em_3d_fitting.overall_b_value ?
_em_3d_fitting.target_criteria ?
_em_3d_fitting.details 'METHOD--MANUAL REFINEMENT PROTOCOL--X-RAY AND HOMOLOGY MODELS'
_em_3d_fitting.method ?
#
loop_
_em_3d_fitting_list.3d_fitting_id
_em_3d_fitting_list.id
_em_3d_fitting_list.pdb_entry_id
_em_3d_fitting_list.pdb_chain_id
_em_3d_fitting_list.details
_em_3d_fitting_list.initial_refinement_model_id
_em_3d_fitting_list.chain_id
_em_3d_fitting_list.chain_residue_range
_em_3d_fitting_list.pdb_chain_residue_range
_em_3d_fitting_list.source_name
_em_3d_fitting_list.type
_em_3d_fitting_list.accession_code
1 1 2AW7 ? ? 1 ? ? ? PDB 'experimental model' 2AW7
1 2 2AWB ? ? 2 ? ? ? PDB 'experimental model' 2AWB
#
_em_3d_reconstruction.entry_id 2VAZ
_em_3d_reconstruction.id 1
_em_3d_reconstruction.symmetry_type POINT
_em_3d_reconstruction.num_particles 31415
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.method 'MANUAL FITTING'
_em_3d_reconstruction.nominal_pixel_size 3
_em_3d_reconstruction.actual_pixel_size 3
_em_3d_reconstruction.resolution 10
_em_3d_reconstruction.magnification_calibration ?
_em_3d_reconstruction.details
;THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE RECORDS ARE MEANINGLESS. THE MRNA HAS BEEN MODELED USING MANIP (MASSIRE AND WESTHOF).
;
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.resolution_method ?
_em_3d_reconstruction.algorithm ?
#
_em_buffer.id 1
_em_buffer.specimen_id 1
_em_buffer.name '20 MM TRIS-HCL PH 7.5, 60 MM KCL, 1MM DTT, 7.5 MM MGCL2'
_em_buffer.pH 7.5
_em_buffer.details '20 MM TRIS-HCL PH 7.5, 60 MM KCL, 1MM DTT, 7.5 MM MGCL2'
#
_em_entity_assembly.id 1
_em_entity_assembly.name '70S PRE-INITIATION COMPLEX ENTRAPPED BY S15- RPSOMRNA'
_em_entity_assembly.type RIBOSOME
_em_entity_assembly.parent_id 0
_em_entity_assembly.synonym ?
_em_entity_assembly.details ?
_em_entity_assembly.oligomeric_details ?
#
_em_image_scans.entry_id 2VAZ
_em_image_scans.id 1
_em_image_scans.image_recording_id 1
_em_image_scans.number_digital_images 67
_em_image_scans.citation_id ?
_em_image_scans.od_range ?
_em_image_scans.quant_bit_size ?
_em_image_scans.sampling_size ?
_em_image_scans.scanner_model ?
_em_image_scans.details ?
_em_image_scans.dimension_height ?
_em_image_scans.dimension_width ?
_em_image_scans.frames_per_image ?
#
_em_imaging.entry_id 2VAZ
_em_imaging.id 1
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.specimen_id 1
_em_imaging.date 2005-01-05
_em_imaging.temperature 77
_em_imaging.microscope_model 'FEI TECNAI F20'
_em_imaging.nominal_defocus_min 800
_em_imaging.nominal_defocus_max 3500
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.nominal_cs 2.0
_em_imaging.mode 'BRIGHT FIELD'
_em_imaging.nominal_magnification 50000
_em_imaging.calibrated_magnification 51484
_em_imaging.accelerating_voltage 200
_em_imaging.details ?
_em_imaging.specimen_holder_type .
_em_imaging.specimen_holder_model .
_em_imaging.citation_id ?
_em_imaging.astigmatism ?
_em_imaging.detector_distance ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.recording_temperature_maximum ?
_em_imaging.recording_temperature_minimum ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.alignment_procedure ?
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.cryogen ?
_em_imaging.residual_tilt ?
#
_em_sample_support.id 1
_em_sample_support.specimen_id 1
_em_sample_support.details 'HOLEY CARBON'
_em_sample_support.method ?
_em_sample_support.film_material ?
_em_sample_support.grid_material ?
_em_sample_support.grid_mesh_size ?
_em_sample_support.grid_type ?
#
_em_vitrification.entry_id 2VAZ
_em_vitrification.id 1
_em_vitrification.instrument 'HOMEMADE PLUNGER'
_em_vitrification.cryogen_name ETHANE
_em_vitrification.specimen_id 1
_em_vitrification.details 'BLOT FOR 2 SECONDS BEFORE PLUNGING IN LIQUID ETHANE USING A HOME-MADE CRYO- PLUNGER'
_em_vitrification.citation_id ?
_em_vitrification.humidity ?
_em_vitrification.method ?
_em_vitrification.temp ?
_em_vitrification.time_resolved_state ?
#
_em_experiment.entry_id 2VAZ
_em_experiment.id 1
_em_experiment.aggregation_state PARTICLE
_em_experiment.entity_assembly_id 1
_em_experiment.reconstruction_method 'SINGLE PARTICLE'
#
_em_single_particle_entity.entry_id 2VAZ
_em_single_particle_entity.id 1
_em_single_particle_entity.point_symmetry C1
_em_single_particle_entity.image_processing_id 1
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A G -15 ? A G 1
2 1 Y 1 A G -14 ? A G 2
3 1 Y 1 A G -13 ? A G 3
4 1 Y 1 A C -12 ? A C 4
5 1 Y 1 A G -11 ? A G 5
6 1 Y 1 A A -10 ? A A 6
7 1 Y 1 A A -9 ? A A 7
8 1 Y 1 A U -8 ? A U 8
9 1 Y 1 A U -7 ? A U 9
10 1 Y 1 A C -6 ? A C 10
11 1 Y 1 A G -5 ? A G 11
12 1 Y 1 A A -4 ? A A 12
13 1 Y 1 A G -3 ? A G 13
14 1 Y 1 A C -2 ? A C 14
15 1 Y 1 A U -1 ? A U 15
16 1 Y 1 A C 0 ? A C 16
17 1 Y 1 A G 1 ? A G 17
18 1 Y 1 A G 2 ? A G 18
19 1 Y 1 A U 3 ? A U 19
20 1 Y 1 A A 4 ? A A 20
21 1 Y 1 A C 5 ? A C 21
22 1 Y 1 A C 6 ? A C 22
23 1 Y 1 A C 7 ? A C 23
24 1 Y 1 A A 8 ? A A 24
25 1 Y 1 A C 76 ? A C 92
26 1 Y 1 A U 77 ? A U 93
27 1 Y 1 A U 78 ? A U 94
28 1 Y 1 A U 79 ? A U 95
29 1 Y 1 A C 80 ? A C 96
30 1 Y 1 A A 81 ? A A 97
31 1 Y 1 A U 82 ? A U 98
32 1 Y 1 A U 83 ? A U 99
33 1 Y 1 A C 84 ? A C 100
34 1 Y 1 A U 85 ? A U 101
35 1 Y 1 A A 86 ? A A 102
36 1 Y 1 A U 87 ? A U 103
37 1 Y 1 A A 88 ? A A 104
38 1 Y 1 A U 89 ? A U 105
39 1 Y 1 A A 90 ? A A 106
40 1 Y 1 A C 91 ? A C 107
41 1 Y 1 A U 101 ? A U 117
42 1 Y 1 A A 102 ? A A 118
43 1 Y 1 A A 103 ? A A 119
44 1 Y 1 A A 104 ? A A 120
45 1 Y 1 A A 105 ? A A 121
46 1 Y 1 A U 106 ? A U 122
47 1 Y 1 A G 107 ? A G 123
48 1 Y 1 A U 108 ? A U 124
49 1 Y 1 A G 115 ? A G 131
50 1 Y 1 A U 116 ? A U 132
51 1 Y 1 A A 117 ? A A 133
52 1 Y 1 A C 118 ? A C 134
53 1 Y 1 A U 119 ? A U 135
54 1 Y 1 A G 120 ? A G 136
55 1 Y 1 A A 121 ? A A 137
56 1 Y 1 A A 122 ? A A 138
57 1 Y 1 A G 123 ? A G 139
58 1 Y 1 A C 124 ? A C 140
59 1 Y 1 A A 125 ? A A 141
60 1 Y 1 A A 126 ? A A 142
61 1 Y 1 A C 127 ? A C 143
62 1 Y 1 A A 128 ? A A 144
63 1 Y 1 A G 129 ? A G 145
64 1 Y 1 A C 130 ? A C 146
65 1 Y 1 A U 131 ? A U 147
66 1 Y 1 A A 132 ? A A 148
67 1 Y 1 A A 133 ? A A 149
68 1 Y 1 A A 134 ? A A 150
69 1 Y 1 A A 135 ? A A 151
70 1 Y 1 A U 136 ? A U 152
71 1 Y 1 A C 137 ? A C 153
72 1 Y 1 A G 138 ? A G 154
73 1 Y 1 A U 139 ? A U 155
74 1 Y 1 A U 140 ? A U 156
75 1 Y 1 A U 141 ? A U 157
76 1 Y 1 A C 142 ? A C 158
77 1 Y 1 A U 143 ? A U 159
78 1 Y 1 A G 144 ? A G 160
79 1 Y 1 A A 145 ? A A 161
80 1 Y 1 A G 146 ? A G 162
81 1 Y 1 A U 147 ? A U 163
82 1 Y 1 A U 148 ? A U 164
83 1 Y 1 A U 149 ? A U 165
84 1 Y 1 A G 150 ? A G 166
85 1 Y 1 A G 151 ? A G 167
86 1 Y 1 A U 152 ? A U 168
87 1 Y 1 A C 153 ? A C 169
88 1 Y 1 A G 154 ? A G 170
89 1 Y 1 A A 155 ? A A 171
90 1 Y 1 A C 156 ? A C 172
91 1 Y 1 A C 157 ? A C 173
92 1 Y 1 A U 158 ? A U 174
93 1 Y 1 A G 159 ? A G 175
94 1 Y 1 A C 160 ? A C 176
95 1 Y 1 A A 161 ? A A 177
96 1 Y 1 A G 162 ? A G 178
97 1 Y 1 A G 163 ? A G 179
98 1 Y 1 A C 164 ? A C 180
99 1 Y 1 A A 165 ? A A 181
100 1 Y 1 A U 166 ? A U 182
101 1 Y 1 A G 167 ? A G 183
102 1 Y 1 A C 168 ? A C 184
103 1 Y 1 A A 169 ? A A 185
104 1 Y 1 F MET 100 ? B MET 1
105 1 Y 1 F ARG 187 ? B ARG 88
106 1 Y 1 F ARG 188 ? B ARG 89
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A OP3 O N N 1
A P P N N 2
A OP1 O N N 3
A OP2 O N N 4
A "O5'" O N N 5
A "C5'" C N N 6
A "C4'" C N R 7
A "O4'" O N N 8
A "C3'" C N S 9
A "O3'" O N N 10
A "C2'" C N R 11
A "O2'" O N N 12
A "C1'" C N R 13
A N9 N Y N 14
A C8 C Y N 15
A N7 N Y N 16
A C5 C Y N 17
A C6 C Y N 18
A N6 N N N 19
A N1 N Y N 20
A C2 C Y N 21
A N3 N Y N 22
A C4 C Y N 23
A HOP3 H N N 24
A HOP2 H N N 25
A "H5'" H N N 26
A "H5''" H N N 27
A "H4'" H N N 28
A "H3'" H N N 29
A "HO3'" H N N 30
A "H2'" H N N 31
A "HO2'" H N N 32
A "H1'" H N N 33
A H8 H N N 34
A H61 H N N 35
A H62 H N N 36
A H2 H N N 37
ALA N N N N 38
ALA CA C N S 39
ALA C C N N 40
ALA O O N N 41
ALA CB C N N 42
ALA OXT O N N 43
ALA H H N N 44
ALA H2 H N N 45
ALA HA H N N 46
ALA HB1 H N N 47
ALA HB2 H N N 48
ALA HB3 H N N 49
ALA HXT H N N 50
ARG N N N N 51
ARG CA C N S 52
ARG C C N N 53
ARG O O N N 54
ARG CB C N N 55
ARG CG C N N 56
ARG CD C N N 57
ARG NE N N N 58
ARG CZ C N N 59
ARG NH1 N N N 60
ARG NH2 N N N 61
ARG OXT O N N 62
ARG H H N N 63
ARG H2 H N N 64
ARG HA H N N 65
ARG HB2 H N N 66
ARG HB3 H N N 67
ARG HG2 H N N 68
ARG HG3 H N N 69
ARG HD2 H N N 70
ARG HD3 H N N 71
ARG HE H N N 72
ARG HH11 H N N 73
ARG HH12 H N N 74
ARG HH21 H N N 75
ARG HH22 H N N 76
ARG HXT H N N 77
ASN N N N N 78
ASN CA C N S 79
ASN C C N N 80
ASN O O N N 81
ASN CB C N N 82
ASN CG C N N 83
ASN OD1 O N N 84
ASN ND2 N N N 85
ASN OXT O N N 86
ASN H H N N 87
ASN H2 H N N 88
ASN HA H N N 89
ASN HB2 H N N 90
ASN HB3 H N N 91
ASN HD21 H N N 92
ASN HD22 H N N 93
ASN HXT H N N 94
ASP N N N N 95
ASP CA C N S 96
ASP C C N N 97
ASP O O N N 98
ASP CB C N N 99
ASP CG C N N 100
ASP OD1 O N N 101
ASP OD2 O N N 102
ASP OXT O N N 103
ASP H H N N 104
ASP H2 H N N 105
ASP HA H N N 106
ASP HB2 H N N 107
ASP HB3 H N N 108
ASP HD2 H N N 109
ASP HXT H N N 110
C OP3 O N N 111
C P P N N 112
C OP1 O N N 113
C OP2 O N N 114
C "O5'" O N N 115
C "C5'" C N N 116
C "C4'" C N R 117
C "O4'" O N N 118
C "C3'" C N S 119
C "O3'" O N N 120
C "C2'" C N R 121
C "O2'" O N N 122
C "C1'" C N R 123
C N1 N N N 124
C C2 C N N 125
C O2 O N N 126
C N3 N N N 127
C C4 C N N 128
C N4 N N N 129
C C5 C N N 130
C C6 C N N 131
C HOP3 H N N 132
C HOP2 H N N 133
C "H5'" H N N 134
C "H5''" H N N 135
C "H4'" H N N 136
C "H3'" H N N 137
C "HO3'" H N N 138
C "H2'" H N N 139
C "HO2'" H N N 140
C "H1'" H N N 141
C H41 H N N 142
C H42 H N N 143
C H5 H N N 144
C H6 H N N 145
G OP3 O N N 146
G P P N N 147
G OP1 O N N 148
G OP2 O N N 149
G "O5'" O N N 150
G "C5'" C N N 151
G "C4'" C N R 152
G "O4'" O N N 153
G "C3'" C N S 154
G "O3'" O N N 155
G "C2'" C N R 156
G "O2'" O N N 157
G "C1'" C N R 158
G N9 N Y N 159
G C8 C Y N 160
G N7 N Y N 161
G C5 C Y N 162
G C6 C N N 163
G O6 O N N 164
G N1 N N N 165
G C2 C N N 166
G N2 N N N 167
G N3 N N N 168
G C4 C Y N 169
G HOP3 H N N 170
G HOP2 H N N 171
G "H5'" H N N 172
G "H5''" H N N 173
G "H4'" H N N 174
G "H3'" H N N 175
G "HO3'" H N N 176
G "H2'" H N N 177
G "HO2'" H N N 178
G "H1'" H N N 179
G H8 H N N 180
G H1 H N N 181
G H21 H N N 182
G H22 H N N 183
GLN N N N N 184
GLN CA C N S 185
GLN C C N N 186
GLN O O N N 187
GLN CB C N N 188
GLN CG C N N 189
GLN CD C N N 190
GLN OE1 O N N 191
GLN NE2 N N N 192
GLN OXT O N N 193
GLN H H N N 194
GLN H2 H N N 195
GLN HA H N N 196
GLN HB2 H N N 197
GLN HB3 H N N 198
GLN HG2 H N N 199
GLN HG3 H N N 200
GLN HE21 H N N 201
GLN HE22 H N N 202
GLN HXT H N N 203
GLU N N N N 204
GLU CA C N S 205
GLU C C N N 206
GLU O O N N 207
GLU CB C N N 208
GLU CG C N N 209
GLU CD C N N 210
GLU OE1 O N N 211
GLU OE2 O N N 212
GLU OXT O N N 213
GLU H H N N 214
GLU H2 H N N 215
GLU HA H N N 216
GLU HB2 H N N 217
GLU HB3 H N N 218
GLU HG2 H N N 219
GLU HG3 H N N 220
GLU HE2 H N N 221
GLU HXT H N N 222
GLY N N N N 223
GLY CA C N N 224
GLY C C N N 225
GLY O O N N 226
GLY OXT O N N 227
GLY H H N N 228
GLY H2 H N N 229
GLY HA2 H N N 230
GLY HA3 H N N 231
GLY HXT H N N 232
HIS N N N N 233
HIS CA C N S 234
HIS C C N N 235
HIS O O N N 236
HIS CB C N N 237
HIS CG C Y N 238
HIS ND1 N Y N 239
HIS CD2 C Y N 240
HIS CE1 C Y N 241
HIS NE2 N Y N 242
HIS OXT O N N 243
HIS H H N N 244
HIS H2 H N N 245
HIS HA H N N 246
HIS HB2 H N N 247
HIS HB3 H N N 248
HIS HD1 H N N 249
HIS HD2 H N N 250
HIS HE1 H N N 251
HIS HE2 H N N 252
HIS HXT H N N 253
ILE N N N N 254
ILE CA C N S 255
ILE C C N N 256
ILE O O N N 257
ILE CB C N S 258
ILE CG1 C N N 259
ILE CG2 C N N 260
ILE CD1 C N N 261
ILE OXT O N N 262
ILE H H N N 263
ILE H2 H N N 264
ILE HA H N N 265
ILE HB H N N 266
ILE HG12 H N N 267
ILE HG13 H N N 268
ILE HG21 H N N 269
ILE HG22 H N N 270
ILE HG23 H N N 271
ILE HD11 H N N 272
ILE HD12 H N N 273
ILE HD13 H N N 274
ILE HXT H N N 275
LEU N N N N 276
LEU CA C N S 277
LEU C C N N 278
LEU O O N N 279
LEU CB C N N 280
LEU CG C N N 281
LEU CD1 C N N 282
LEU CD2 C N N 283
LEU OXT O N N 284
LEU H H N N 285
LEU H2 H N N 286
LEU HA H N N 287
LEU HB2 H N N 288
LEU HB3 H N N 289
LEU HG H N N 290
LEU HD11 H N N 291
LEU HD12 H N N 292
LEU HD13 H N N 293
LEU HD21 H N N 294
LEU HD22 H N N 295
LEU HD23 H N N 296
LEU HXT H N N 297
LYS N N N N 298
LYS CA C N S 299
LYS C C N N 300
LYS O O N N 301
LYS CB C N N 302
LYS CG C N N 303
LYS CD C N N 304
LYS CE C N N 305
LYS NZ N N N 306
LYS OXT O N N 307
LYS H H N N 308
LYS H2 H N N 309
LYS HA H N N 310
LYS HB2 H N N 311
LYS HB3 H N N 312
LYS HG2 H N N 313
LYS HG3 H N N 314
LYS HD2 H N N 315
LYS HD3 H N N 316
LYS HE2 H N N 317
LYS HE3 H N N 318
LYS HZ1 H N N 319
LYS HZ2 H N N 320
LYS HZ3 H N N 321
LYS HXT H N N 322
MET N N N N 323
MET CA C N S 324
MET C C N N 325
MET O O N N 326
MET CB C N N 327
MET CG C N N 328
MET SD S N N 329
MET CE C N N 330
MET OXT O N N 331
MET H H N N 332
MET H2 H N N 333
MET HA H N N 334
MET HB2 H N N 335
MET HB3 H N N 336
MET HG2 H N N 337
MET HG3 H N N 338
MET HE1 H N N 339
MET HE2 H N N 340
MET HE3 H N N 341
MET HXT H N N 342
PHE N N N N 343
PHE CA C N S 344
PHE C C N N 345
PHE O O N N 346
PHE CB C N N 347
PHE CG C Y N 348
PHE CD1 C Y N 349
PHE CD2 C Y N 350
PHE CE1 C Y N 351
PHE CE2 C Y N 352
PHE CZ C Y N 353
PHE OXT O N N 354
PHE H H N N 355
PHE H2 H N N 356
PHE HA H N N 357
PHE HB2 H N N 358
PHE HB3 H N N 359
PHE HD1 H N N 360
PHE HD2 H N N 361
PHE HE1 H N N 362
PHE HE2 H N N 363
PHE HZ H N N 364
PHE HXT H N N 365
SER N N N N 366
SER CA C N S 367
SER C C N N 368
SER O O N N 369
SER CB C N N 370
SER OG O N N 371
SER OXT O N N 372
SER H H N N 373
SER H2 H N N 374
SER HA H N N 375
SER HB2 H N N 376
SER HB3 H N N 377
SER HG H N N 378
SER HXT H N N 379
THR N N N N 380
THR CA C N S 381
THR C C N N 382
THR O O N N 383
THR CB C N R 384
THR OG1 O N N 385
THR CG2 C N N 386
THR OXT O N N 387
THR H H N N 388
THR H2 H N N 389
THR HA H N N 390
THR HB H N N 391
THR HG1 H N N 392
THR HG21 H N N 393
THR HG22 H N N 394
THR HG23 H N N 395
THR HXT H N N 396
TYR N N N N 397
TYR CA C N S 398
TYR C C N N 399
TYR O O N N 400
TYR CB C N N 401
TYR CG C Y N 402
TYR CD1 C Y N 403
TYR CD2 C Y N 404
TYR CE1 C Y N 405
TYR CE2 C Y N 406
TYR CZ C Y N 407
TYR OH O N N 408
TYR OXT O N N 409
TYR H H N N 410
TYR H2 H N N 411
TYR HA H N N 412
TYR HB2 H N N 413
TYR HB3 H N N 414
TYR HD1 H N N 415
TYR HD2 H N N 416
TYR HE1 H N N 417
TYR HE2 H N N 418
TYR HH H N N 419
TYR HXT H N N 420
U OP3 O N N 421
U P P N N 422
U OP1 O N N 423
U OP2 O N N 424
U "O5'" O N N 425
U "C5'" C N N 426
U "C4'" C N R 427
U "O4'" O N N 428
U "C3'" C N S 429
U "O3'" O N N 430
U "C2'" C N R 431
U "O2'" O N N 432
U "C1'" C N R 433
U N1 N N N 434
U C2 C N N 435
U O2 O N N 436
U N3 N N N 437
U C4 C N N 438
U O4 O N N 439
U C5 C N N 440
U C6 C N N 441
U HOP3 H N N 442
U HOP2 H N N 443
U "H5'" H N N 444
U "H5''" H N N 445
U "H4'" H N N 446
U "H3'" H N N 447
U "HO3'" H N N 448
U "H2'" H N N 449
U "HO2'" H N N 450
U "H1'" H N N 451
U H3 H N N 452
U H5 H N N 453
U H6 H N N 454
VAL N N N N 455
VAL CA C N S 456
VAL C C N N 457
VAL O O N N 458
VAL CB C N N 459
VAL CG1 C N N 460
VAL CG2 C N N 461
VAL OXT O N N 462
VAL H H N N 463
VAL H2 H N N 464
VAL HA H N N 465
VAL HB H N N 466
VAL HG11 H N N 467
VAL HG12 H N N 468
VAL HG13 H N N 469
VAL HG21 H N N 470
VAL HG22 H N N 471
VAL HG23 H N N 472
VAL HXT H N N 473
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A OP3 P sing N N 1
A OP3 HOP3 sing N N 2
A P OP1 doub N N 3
A P OP2 sing N N 4
A P "O5'" sing N N 5
A OP2 HOP2 sing N N 6
A "O5'" "C5'" sing N N 7
A "C5'" "C4'" sing N N 8
A "C5'" "H5'" sing N N 9
A "C5'" "H5''" sing N N 10
A "C4'" "O4'" sing N N 11
A "C4'" "C3'" sing N N 12
A "C4'" "H4'" sing N N 13
A "O4'" "C1'" sing N N 14
A "C3'" "O3'" sing N N 15
A "C3'" "C2'" sing N N 16
A "C3'" "H3'" sing N N 17
A "O3'" "HO3'" sing N N 18
A "C2'" "O2'" sing N N 19
A "C2'" "C1'" sing N N 20
A "C2'" "H2'" sing N N 21
A "O2'" "HO2'" sing N N 22
A "C1'" N9 sing N N 23
A "C1'" "H1'" sing N N 24
A N9 C8 sing Y N 25
A N9 C4 sing Y N 26
A C8 N7 doub Y N 27
A C8 H8 sing N N 28
A N7 C5 sing Y N 29
A C5 C6 sing Y N 30
A C5 C4 doub Y N 31
A C6 N6 sing N N 32
A C6 N1 doub Y N 33
A N6 H61 sing N N 34
A N6 H62 sing N N 35
A N1 C2 sing Y N 36
A C2 N3 doub Y N 37
A C2 H2 sing N N 38
A N3 C4 sing Y N 39
ALA N CA sing N N 40
ALA N H sing N N 41
ALA N H2 sing N N 42
ALA CA C sing N N 43
ALA CA CB sing N N 44
ALA CA HA sing N N 45
ALA C O doub N N 46
ALA C OXT sing N N 47
ALA CB HB1 sing N N 48
ALA CB HB2 sing N N 49
ALA CB HB3 sing N N 50
ALA OXT HXT sing N N 51
ARG N CA sing N N 52
ARG N H sing N N 53
ARG N H2 sing N N 54
ARG CA C sing N N 55
ARG CA CB sing N N 56
ARG CA HA sing N N 57
ARG C O doub N N 58
ARG C OXT sing N N 59
ARG CB CG sing N N 60
ARG CB HB2 sing N N 61
ARG CB HB3 sing N N 62
ARG CG CD sing N N 63
ARG CG HG2 sing N N 64
ARG CG HG3 sing N N 65
ARG CD NE sing N N 66
ARG CD HD2 sing N N 67
ARG CD HD3 sing N N 68
ARG NE CZ sing N N 69
ARG NE HE sing N N 70
ARG CZ NH1 sing N N 71
ARG CZ NH2 doub N N 72
ARG NH1 HH11 sing N N 73
ARG NH1 HH12 sing N N 74
ARG NH2 HH21 sing N N 75
ARG NH2 HH22 sing N N 76
ARG OXT HXT sing N N 77
ASN N CA sing N N 78
ASN N H sing N N 79
ASN N H2 sing N N 80
ASN CA C sing N N 81
ASN CA CB sing N N 82
ASN CA HA sing N N 83
ASN C O doub N N 84
ASN C OXT sing N N 85
ASN CB CG sing N N 86
ASN CB HB2 sing N N 87
ASN CB HB3 sing N N 88
ASN CG OD1 doub N N 89
ASN CG ND2 sing N N 90
ASN ND2 HD21 sing N N 91
ASN ND2 HD22 sing N N 92
ASN OXT HXT sing N N 93
ASP N CA sing N N 94
ASP N H sing N N 95
ASP N H2 sing N N 96
ASP CA C sing N N 97
ASP CA CB sing N N 98
ASP CA HA sing N N 99
ASP C O doub N N 100
ASP C OXT sing N N 101
ASP CB CG sing N N 102
ASP CB HB2 sing N N 103
ASP CB HB3 sing N N 104
ASP CG OD1 doub N N 105
ASP CG OD2 sing N N 106
ASP OD2 HD2 sing N N 107
ASP OXT HXT sing N N 108
C OP3 P sing N N 109
C OP3 HOP3 sing N N 110
C P OP1 doub N N 111
C P OP2 sing N N 112
C P "O5'" sing N N 113
C OP2 HOP2 sing N N 114
C "O5'" "C5'" sing N N 115
C "C5'" "C4'" sing N N 116
C "C5'" "H5'" sing N N 117
C "C5'" "H5''" sing N N 118
C "C4'" "O4'" sing N N 119
C "C4'" "C3'" sing N N 120
C "C4'" "H4'" sing N N 121
C "O4'" "C1'" sing N N 122
C "C3'" "O3'" sing N N 123
C "C3'" "C2'" sing N N 124
C "C3'" "H3'" sing N N 125
C "O3'" "HO3'" sing N N 126
C "C2'" "O2'" sing N N 127
C "C2'" "C1'" sing N N 128
C "C2'" "H2'" sing N N 129
C "O2'" "HO2'" sing N N 130
C "C1'" N1 sing N N 131
C "C1'" "H1'" sing N N 132
C N1 C2 sing N N 133
C N1 C6 sing N N 134
C C2 O2 doub N N 135
C C2 N3 sing N N 136
C N3 C4 doub N N 137
C C4 N4 sing N N 138
C C4 C5 sing N N 139
C N4 H41 sing N N 140
C N4 H42 sing N N 141
C C5 C6 doub N N 142
C C5 H5 sing N N 143
C C6 H6 sing N N 144
G OP3 P sing N N 145
G OP3 HOP3 sing N N 146
G P OP1 doub N N 147
G P OP2 sing N N 148
G P "O5'" sing N N 149
G OP2 HOP2 sing N N 150
G "O5'" "C5'" sing N N 151
G "C5'" "C4'" sing N N 152
G "C5'" "H5'" sing N N 153
G "C5'" "H5''" sing N N 154
G "C4'" "O4'" sing N N 155
G "C4'" "C3'" sing N N 156
G "C4'" "H4'" sing N N 157
G "O4'" "C1'" sing N N 158
G "C3'" "O3'" sing N N 159
G "C3'" "C2'" sing N N 160
G "C3'" "H3'" sing N N 161
G "O3'" "HO3'" sing N N 162
G "C2'" "O2'" sing N N 163
G "C2'" "C1'" sing N N 164
G "C2'" "H2'" sing N N 165
G "O2'" "HO2'" sing N N 166
G "C1'" N9 sing N N 167
G "C1'" "H1'" sing N N 168
G N9 C8 sing Y N 169
G N9 C4 sing Y N 170
G C8 N7 doub Y N 171
G C8 H8 sing N N 172
G N7 C5 sing Y N 173
G C5 C6 sing N N 174
G C5 C4 doub Y N 175
G C6 O6 doub N N 176
G C6 N1 sing N N 177
G N1 C2 sing N N 178
G N1 H1 sing N N 179
G C2 N2 sing N N 180
G C2 N3 doub N N 181
G N2 H21 sing N N 182
G N2 H22 sing N N 183
G N3 C4 sing N N 184
GLN N CA sing N N 185
GLN N H sing N N 186
GLN N H2 sing N N 187
GLN CA C sing N N 188
GLN CA CB sing N N 189
GLN CA HA sing N N 190
GLN C O doub N N 191
GLN C OXT sing N N 192
GLN CB CG sing N N 193
GLN CB HB2 sing N N 194
GLN CB HB3 sing N N 195
GLN CG CD sing N N 196
GLN CG HG2 sing N N 197
GLN CG HG3 sing N N 198
GLN CD OE1 doub N N 199
GLN CD NE2 sing N N 200
GLN NE2 HE21 sing N N 201
GLN NE2 HE22 sing N N 202
GLN OXT HXT sing N N 203
GLU N CA sing N N 204
GLU N H sing N N 205
GLU N H2 sing N N 206
GLU CA C sing N N 207
GLU CA CB sing N N 208
GLU CA HA sing N N 209
GLU C O doub N N 210
GLU C OXT sing N N 211
GLU CB CG sing N N 212
GLU CB HB2 sing N N 213
GLU CB HB3 sing N N 214
GLU CG CD sing N N 215
GLU CG HG2 sing N N 216
GLU CG HG3 sing N N 217
GLU CD OE1 doub N N 218
GLU CD OE2 sing N N 219
GLU OE2 HE2 sing N N 220
GLU OXT HXT sing N N 221
GLY N CA sing N N 222
GLY N H sing N N 223
GLY N H2 sing N N 224
GLY CA C sing N N 225
GLY CA HA2 sing N N 226
GLY CA HA3 sing N N 227
GLY C O doub N N 228
GLY C OXT sing N N 229
GLY OXT HXT sing N N 230
HIS N CA sing N N 231
HIS N H sing N N 232
HIS N H2 sing N N 233
HIS CA C sing N N 234
HIS CA CB sing N N 235
HIS CA HA sing N N 236
HIS C O doub N N 237
HIS C OXT sing N N 238
HIS CB CG sing N N 239
HIS CB HB2 sing N N 240
HIS CB HB3 sing N N 241
HIS CG ND1 sing Y N 242
HIS CG CD2 doub Y N 243
HIS ND1 CE1 doub Y N 244
HIS ND1 HD1 sing N N 245
HIS CD2 NE2 sing Y N 246
HIS CD2 HD2 sing N N 247
HIS CE1 NE2 sing Y N 248
HIS CE1 HE1 sing N N 249
HIS NE2 HE2 sing N N 250
HIS OXT HXT sing N N 251
ILE N CA sing N N 252
ILE N H sing N N 253
ILE N H2 sing N N 254
ILE CA C sing N N 255
ILE CA CB sing N N 256
ILE CA HA sing N N 257
ILE C O doub N N 258
ILE C OXT sing N N 259
ILE CB CG1 sing N N 260
ILE CB CG2 sing N N 261
ILE CB HB sing N N 262
ILE CG1 CD1 sing N N 263
ILE CG1 HG12 sing N N 264
ILE CG1 HG13 sing N N 265
ILE CG2 HG21 sing N N 266
ILE CG2 HG22 sing N N 267
ILE CG2 HG23 sing N N 268
ILE CD1 HD11 sing N N 269
ILE CD1 HD12 sing N N 270
ILE CD1 HD13 sing N N 271
ILE OXT HXT sing N N 272
LEU N CA sing N N 273
LEU N H sing N N 274
LEU N H2 sing N N 275
LEU CA C sing N N 276
LEU CA CB sing N N 277
LEU CA HA sing N N 278
LEU C O doub N N 279
LEU C OXT sing N N 280
LEU CB CG sing N N 281
LEU CB HB2 sing N N 282
LEU CB HB3 sing N N 283
LEU CG CD1 sing N N 284
LEU CG CD2 sing N N 285
LEU CG HG sing N N 286
LEU CD1 HD11 sing N N 287
LEU CD1 HD12 sing N N 288
LEU CD1 HD13 sing N N 289
LEU CD2 HD21 sing N N 290
LEU CD2 HD22 sing N N 291
LEU CD2 HD23 sing N N 292
LEU OXT HXT sing N N 293
LYS N CA sing N N 294
LYS N H sing N N 295
LYS N H2 sing N N 296
LYS CA C sing N N 297
LYS CA CB sing N N 298
LYS CA HA sing N N 299
LYS C O doub N N 300
LYS C OXT sing N N 301
LYS CB CG sing N N 302
LYS CB HB2 sing N N 303
LYS CB HB3 sing N N 304
LYS CG CD sing N N 305
LYS CG HG2 sing N N 306
LYS CG HG3 sing N N 307
LYS CD CE sing N N 308
LYS CD HD2 sing N N 309
LYS CD HD3 sing N N 310
LYS CE NZ sing N N 311
LYS CE HE2 sing N N 312
LYS CE HE3 sing N N 313
LYS NZ HZ1 sing N N 314
LYS NZ HZ2 sing N N 315
LYS NZ HZ3 sing N N 316
LYS OXT HXT sing N N 317
MET N CA sing N N 318
MET N H sing N N 319
MET N H2 sing N N 320
MET CA C sing N N 321
MET CA CB sing N N 322
MET CA HA sing N N 323
MET C O doub N N 324
MET C OXT sing N N 325
MET CB CG sing N N 326
MET CB HB2 sing N N 327
MET CB HB3 sing N N 328
MET CG SD sing N N 329
MET CG HG2 sing N N 330
MET CG HG3 sing N N 331
MET SD CE sing N N 332
MET CE HE1 sing N N 333
MET CE HE2 sing N N 334
MET CE HE3 sing N N 335
MET OXT HXT sing N N 336
PHE N CA sing N N 337
PHE N H sing N N 338
PHE N H2 sing N N 339
PHE CA C sing N N 340
PHE CA CB sing N N 341
PHE CA HA sing N N 342
PHE C O doub N N 343
PHE C OXT sing N N 344
PHE CB CG sing N N 345
PHE CB HB2 sing N N 346
PHE CB HB3 sing N N 347
PHE CG CD1 doub Y N 348
PHE CG CD2 sing Y N 349
PHE CD1 CE1 sing Y N 350
PHE CD1 HD1 sing N N 351
PHE CD2 CE2 doub Y N 352
PHE CD2 HD2 sing N N 353
PHE CE1 CZ doub Y N 354
PHE CE1 HE1 sing N N 355
PHE CE2 CZ sing Y N 356
PHE CE2 HE2 sing N N 357
PHE CZ HZ sing N N 358
PHE OXT HXT sing N N 359
SER N CA sing N N 360
SER N H sing N N 361
SER N H2 sing N N 362
SER CA C sing N N 363
SER CA CB sing N N 364
SER CA HA sing N N 365
SER C O doub N N 366
SER C OXT sing N N 367
SER CB OG sing N N 368
SER CB HB2 sing N N 369
SER CB HB3 sing N N 370
SER OG HG sing N N 371
SER OXT HXT sing N N 372
THR N CA sing N N 373
THR N H sing N N 374
THR N H2 sing N N 375
THR CA C sing N N 376
THR CA CB sing N N 377
THR CA HA sing N N 378
THR C O doub N N 379
THR C OXT sing N N 380
THR CB OG1 sing N N 381
THR CB CG2 sing N N 382
THR CB HB sing N N 383
THR OG1 HG1 sing N N 384
THR CG2 HG21 sing N N 385
THR CG2 HG22 sing N N 386
THR CG2 HG23 sing N N 387
THR OXT HXT sing N N 388
TYR N CA sing N N 389
TYR N H sing N N 390
TYR N H2 sing N N 391
TYR CA C sing N N 392
TYR CA CB sing N N 393
TYR CA HA sing N N 394
TYR C O doub N N 395
TYR C OXT sing N N 396
TYR CB CG sing N N 397
TYR CB HB2 sing N N 398
TYR CB HB3 sing N N 399
TYR CG CD1 doub Y N 400
TYR CG CD2 sing Y N 401
TYR CD1 CE1 sing Y N 402
TYR CD1 HD1 sing N N 403
TYR CD2 CE2 doub Y N 404
TYR CD2 HD2 sing N N 405
TYR CE1 CZ doub Y N 406
TYR CE1 HE1 sing N N 407
TYR CE2 CZ sing Y N 408
TYR CE2 HE2 sing N N 409
TYR CZ OH sing N N 410
TYR OH HH sing N N 411
TYR OXT HXT sing N N 412
U OP3 P sing N N 413
U OP3 HOP3 sing N N 414
U P OP1 doub N N 415
U P OP2 sing N N 416
U P "O5'" sing N N 417
U OP2 HOP2 sing N N 418
U "O5'" "C5'" sing N N 419
U "C5'" "C4'" sing N N 420
U "C5'" "H5'" sing N N 421
U "C5'" "H5''" sing N N 422
U "C4'" "O4'" sing N N 423
U "C4'" "C3'" sing N N 424
U "C4'" "H4'" sing N N 425
U "O4'" "C1'" sing N N 426
U "C3'" "O3'" sing N N 427
U "C3'" "C2'" sing N N 428
U "C3'" "H3'" sing N N 429
U "O3'" "HO3'" sing N N 430
U "C2'" "O2'" sing N N 431
U "C2'" "C1'" sing N N 432
U "C2'" "H2'" sing N N 433
U "O2'" "HO2'" sing N N 434
U "C1'" N1 sing N N 435
U "C1'" "H1'" sing N N 436
U N1 C2 sing N N 437
U N1 C6 sing N N 438
U C2 O2 doub N N 439
U C2 N3 sing N N 440
U N3 C4 sing N N 441
U N3 H3 sing N N 442
U C4 O4 doub N N 443
U C4 C5 sing N N 444
U C5 C6 doub N N 445
U C5 H5 sing N N 446
U C6 H6 sing N N 447
VAL N CA sing N N 448
VAL N H sing N N 449
VAL N H2 sing N N 450
VAL CA C sing N N 451
VAL CA CB sing N N 452
VAL CA HA sing N N 453
VAL C O doub N N 454
VAL C OXT sing N N 455
VAL CB CG1 sing N N 456
VAL CB CG2 sing N N 457
VAL CB HB sing N N 458
VAL CG1 HG11 sing N N 459
VAL CG1 HG12 sing N N 460
VAL CG1 HG13 sing N N 461
VAL CG2 HG21 sing N N 462
VAL CG2 HG22 sing N N 463
VAL CG2 HG23 sing N N 464
VAL OXT HXT sing N N 465
#
_em_ctf_correction.id 1
_em_ctf_correction.details 'INDIVIDUAL PARTICLES'
_em_ctf_correction.type ?
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.details ?
_em_image_recording.id 1
_em_image_recording.avg_electron_dose_per_image 20
_em_image_recording.film_or_detector_model 'KODAK SO-163 FILM'
_em_image_recording.imaging_id 1
_em_image_recording.detector_mode ?
_em_image_recording.average_exposure_time ?
_em_image_recording.num_diffraction_images ?
_em_image_recording.num_grids_imaged ?
_em_image_recording.num_real_images ?
#
loop_
_em_software.id
_em_software.name
_em_software.version
_em_software.category
_em_software.details
_em_software.image_processing_id
_em_software.imaging_id
_em_software.fitting_id
1 O ? 'MODEL FITTING' ? ? ? 1
2 PyMOL ? 'MODEL FITTING' ? ? ? 1
3 IMAGIC 5 RECONSTRUCTION ? 1 ? ?
#
_em_specimen.experiment_id 1
_em_specimen.id 1
_em_specimen.concentration 0.5
_em_specimen.vitrification_applied YES
_em_specimen.staining_applied NO
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.details ?
#
loop_
_pdbx_coordinate_model.asym_id
_pdbx_coordinate_model.type
A 'P ATOMS ONLY'
B 'CA ATOMS ONLY'
#
loop_
_pdbx_initial_refinement_model.id
_pdbx_initial_refinement_model.type
_pdbx_initial_refinement_model.source_name
_pdbx_initial_refinement_model.accession_code
1 'experimental model' PDB 2AW7
2 'experimental model' PDB 2AWB
#
_atom_sites.entry_id 2VAZ
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 P P . A A 1 25 ? -73.739 -93.192 14.845 1.00 1.00 ? 9 A A P 1
ATOM 2 P P . C A 1 26 ? -68.586 -92.653 17.790 1.00 1.00 ? 10 C A P 1
ATOM 3 P P . G A 1 27 ? -63.937 -90.604 20.040 1.00 1.00 ? 11 G A P 1
ATOM 4 P P . U A 1 28 ? -61.019 -86.288 21.592 1.00 1.00 ? 12 U A P 1
ATOM 5 P P . C A 1 29 ? -60.390 -81.187 23.379 1.00 1.00 ? 13 C A P 1
ATOM 6 P P . G A 1 30 ? -62.639 -76.638 25.373 1.00 1.00 ? 14 G A P 1
ATOM 7 P P . C A 1 31 ? -66.696 -74.009 27.775 1.00 1.00 ? 15 C A P 1
ATOM 8 P P . G A 1 32 ? -70.893 -73.731 31.074 1.00 1.00 ? 16 G A P 1
ATOM 9 P P . U A 1 33 ? -74.278 -76.028 34.714 1.00 1.00 ? 17 U A P 1
ATOM 10 P P . A A 1 34 ? -75.412 -79.543 38.595 1.00 1.00 ? 18 A A P 1
ATOM 11 P P . A A 1 35 ? -73.903 -83.380 42.222 1.00 1.00 ? 19 A A P 1
ATOM 12 P P . A A 1 36 ? -70.220 -85.826 45.304 1.00 1.00 ? 20 A A P 1
ATOM 13 P P . U A 1 37 ? -65.536 -86.015 47.968 1.00 1.00 ? 21 U A P 1
ATOM 14 P P . U A 1 38 ? -60.655 -83.757 49.878 1.00 1.00 ? 22 U A P 1
ATOM 15 P P . G A 1 39 ? -57.096 -79.155 50.363 1.00 1.00 ? 23 G A P 1
ATOM 16 P P . U A 1 40 ? -56.655 -74.205 51.573 1.00 1.00 ? 24 U A P 1
ATOM 17 P P . U A 1 41 ? -57.063 -71.102 55.340 1.00 1.00 ? 25 U A P 1
ATOM 18 P P . U A 1 42 ? -61.986 -73.446 56.345 1.00 1.00 ? 26 U A P 1
ATOM 19 P P . A A 1 43 ? -66.537 -74.654 54.411 1.00 1.00 ? 27 A A P 1
ATOM 20 P P . A A 1 44 ? -69.541 -74.583 49.910 1.00 1.00 ? 28 A A P 1
ATOM 21 P P . C A 1 45 ? -69.569 -72.741 44.517 1.00 1.00 ? 29 C A P 1
ATOM 22 P P . A A 1 46 ? -67.167 -71.620 39.820 1.00 1.00 ? 30 A A P 1
ATOM 23 P P . C A 1 47 ? -62.796 -73.262 37.367 1.00 1.00 ? 31 C A P 1
ATOM 24 P P . U A 1 48 ? -59.890 -76.907 35.443 1.00 1.00 ? 32 U A P 1
ATOM 25 P P . U A 1 49 ? -59.341 -81.808 33.646 1.00 1.00 ? 33 U A P 1
ATOM 26 P P . U A 1 50 ? -61.301 -86.520 31.990 1.00 1.00 ? 34 U A P 1
ATOM 27 P P . G A 1 51 ? -65.242 -89.712 30.147 1.00 1.00 ? 35 G A P 1
ATOM 28 P P . C A 1 52 ? -70.191 -90.495 28.077 1.00 1.00 ? 36 C A P 1
ATOM 29 P P . G A 1 53 ? -74.428 -89.004 25.175 1.00 1.00 ? 37 G A P 1
ATOM 30 P P . U A 1 54 ? -76.942 -85.501 21.813 1.00 1.00 ? 38 U A P 1
ATOM 31 P P . A A 1 55 ? -77.041 -81.795 18.001 1.00 1.00 ? 39 A A P 1
ATOM 32 P P . A A 1 56 ? -74.538 -78.499 14.248 1.00 1.00 ? 40 A A P 1
ATOM 33 P P . C A 1 57 ? -70.860 -77.387 10.794 1.00 1.00 ? 41 C A P 1
ATOM 34 P P . G A 1 58 ? -66.607 -78.656 7.551 1.00 1.00 ? 42 G A P 1
ATOM 35 P P . U A 1 59 ? -61.307 -81.728 5.790 1.00 1.00 ? 43 U A P 1
ATOM 36 P P . A A 1 60 ? -56.168 -84.853 6.910 1.00 0.00 ? 44 A A P 1
ATOM 37 P P . C A 1 61 ? -52.261 -89.829 7.966 1.00 0.00 ? 45 C A P 1
ATOM 38 P P . A A 1 62 ? -48.914 -93.686 11.082 1.00 0.00 ? 46 A A P 1
ATOM 39 P P . C A 1 63 ? -48.215 -97.425 14.361 1.00 0.00 ? 47 C A P 1
ATOM 40 P P . U A 1 64 ? -50.335 -100.589 17.317 1.00 0.00 ? 48 U A P 1
ATOM 41 P P . G A 1 65 ? -54.308 -102.295 20.610 1.00 1.00 ? 49 G A P 1
ATOM 42 P P . G A 1 66 ? -56.602 -107.214 22.589 1.00 1.00 ? 50 G A P 1
ATOM 43 P P . G A 1 67 ? -60.076 -111.549 21.446 1.00 1.00 ? 51 G A P 1
ATOM 44 P P . A A 1 68 ? -63.109 -114.757 18.045 1.00 1.00 ? 52 A A P 1
ATOM 45 P P . U A 1 69 ? -63.844 -116.469 13.378 1.00 1.00 ? 53 U A P 1
ATOM 46 P P . C A 1 70 ? -66.223 -116.239 7.316 1.00 1.00 ? 54 C A P 1
ATOM 47 P P . G A 1 71 ? -65.997 -114.532 1.234 1.00 1.00 ? 55 G A P 1
ATOM 48 P P . C A 1 72 ? -63.667 -112.953 -3.423 1.00 1.00 ? 56 C A P 1
ATOM 49 P P . U A 1 73 ? -59.022 -112.243 -6.599 1.00 1.00 ? 57 U A P 1
ATOM 50 P P . G A 1 74 ? -53.320 -113.541 -7.426 1.00 1.00 ? 58 G A P 1
ATOM 51 P P . A A 1 75 ? -49.141 -116.433 -7.957 1.00 1.00 ? 59 A A P 1
ATOM 52 P P . A A 1 76 ? -45.484 -120.514 -7.633 1.00 1.00 ? 60 A A P 1
ATOM 53 P P . U A 1 77 ? -42.273 -124.499 -12.575 1.00 1.00 ? 61 U A P 1
ATOM 54 P P . U A 1 78 ? -46.810 -123.836 -14.411 1.00 1.00 ? 62 U A P 1
ATOM 55 P P . A A 1 79 ? -51.775 -121.518 -14.603 1.00 1.00 ? 63 A A P 1
ATOM 56 P P . G A 1 80 ? -56.914 -120.810 -12.667 1.00 1.00 ? 64 G A P 1
ATOM 57 P P . A A 1 81 ? -60.751 -121.748 -8.703 1.00 1.00 ? 65 A A P 1
ATOM 58 P P . G A 1 82 ? -62.240 -123.271 -3.507 1.00 1.00 ? 66 G A P 1
ATOM 59 P P . A A 1 83 ? -60.969 -124.232 1.902 1.00 1.00 ? 67 A A P 1
ATOM 60 P P . U A 1 84 ? -57.865 -123.580 6.171 1.00 1.00 ? 68 U A P 1
ATOM 61 P P . C A 1 85 ? -53.278 -120.532 8.127 1.00 1.00 ? 69 C A P 1
ATOM 62 P P . G A 1 86 ? -50.705 -116.042 9.059 1.00 1.00 ? 70 G A P 1
ATOM 63 P P . G A 1 87 ? -50.110 -110.647 8.215 1.00 1.00 ? 71 G A P 1
ATOM 64 P P . C A 1 88 ? -52.476 -105.662 7.084 1.00 1.00 ? 72 C A P 1
ATOM 65 P P . G A 1 89 ? -56.517 -101.882 6.640 1.00 1.00 ? 73 G A P 1
ATOM 66 P P . U A 1 90 ? -61.632 -100.165 7.584 1.00 1.00 ? 74 U A P 1
ATOM 67 P P . C A 1 91 ? -66.801 -100.166 9.593 1.00 1.00 ? 75 C A P 1
ATOM 68 P P . U A 1 108 ? -51.549 -88.814 24.621 1.00 0.00 ? 92 U A P 1
ATOM 69 P P . A A 1 109 ? -54.079 -84.065 23.584 1.00 0.00 ? 93 A A P 1
ATOM 70 P P . A A 1 110 ? -53.577 -78.184 23.375 1.00 0.00 ? 94 A A P 1
ATOM 71 P P . G A 1 111 ? -50.811 -73.035 23.730 1.00 0.00 ? 95 G A P 1
ATOM 72 P P . G A 1 112 ? -45.281 -71.470 22.240 1.00 0.00 ? 96 G A P 1
ATOM 73 P P . A A 1 113 ? -40.980 -72.114 18.245 1.00 0.00 ? 97 A A P 1
ATOM 74 P P . G A 1 114 ? -38.863 -74.465 13.497 1.00 0.00 ? 98 G A P 1
ATOM 75 P P . G A 1 115 ? -39.487 -77.893 9.076 1.00 0.00 ? 99 G A P 1
ATOM 76 P P . U A 1 116 ? -42.332 -81.844 4.152 1.00 0.00 ? 100 U A P 1
ATOM 77 P P . C A 1 125 ? -45.502 -129.122 -3.186 1.00 1.00 ? 109 C A P 1
ATOM 78 P P . U A 1 126 ? -48.999 -133.894 -3.938 1.00 1.00 ? 110 U A P 1
ATOM 79 P P . C A 1 127 ? -53.209 -136.742 -6.305 1.00 1.00 ? 111 C A P 1
ATOM 80 P P . U A 1 128 ? -56.676 -137.712 -10.509 1.00 1.00 ? 112 U A P 1
ATOM 81 P P . A A 1 129 ? -58.264 -136.891 -15.871 1.00 1.00 ? 113 A A P 1
ATOM 82 P P . A A 1 130 ? -57.244 -135.192 -21.376 1.00 1.00 ? 114 A A P 1
ATOM 83 C CA . SER B 2 2 ? -62.376 -115.114 -12.342 1.00 0.90 ? 101 SER F CA 1
ATOM 84 C CA . LEU B 2 3 ? -61.032 -114.207 -15.774 1.00 99.71 ? 102 LEU F CA 1
ATOM 85 C CA . SER B 2 4 ? -63.089 -116.901 -17.521 1.00 0.08 ? 103 SER F CA 1
ATOM 86 C CA . THR B 2 5 ? -62.612 -118.733 -20.739 1.00 96.10 ? 104 THR F CA 1
ATOM 87 C CA . GLU B 2 6 ? -64.437 -116.348 -23.026 1.00 0.18 ? 105 GLU F CA 1
ATOM 88 C CA . ALA B 2 7 ? -61.131 -114.550 -22.553 1.00 93.38 ? 106 ALA F CA 1
ATOM 89 C CA . THR B 2 8 ? -58.384 -116.850 -21.479 1.00 74.20 ? 107 THR F CA 1
ATOM 90 C CA . ALA B 2 9 ? -59.393 -119.378 -24.104 1.00 77.66 ? 108 ALA F CA 1
ATOM 91 C CA . LYS B 2 10 ? -60.024 -116.601 -26.574 1.00 74.45 ? 109 LYS F CA 1
ATOM 92 C CA . ILE B 2 11 ? -56.444 -115.401 -26.387 1.00 63.59 ? 110 ILE F CA 1
ATOM 93 C CA . VAL B 2 12 ? -54.985 -118.927 -26.520 1.00 63.60 ? 111 VAL F CA 1
ATOM 94 C CA . SER B 2 13 ? -57.031 -119.771 -29.582 1.00 71.86 ? 112 SER F CA 1
ATOM 95 C CA . GLU B 2 14 ? -55.375 -116.758 -31.171 1.00 77.54 ? 113 GLU F CA 1
ATOM 96 C CA . PHE B 2 15 ? -51.711 -117.099 -30.259 1.00 70.74 ? 114 PHE F CA 1
ATOM 97 C CA . GLY B 2 16 ? -51.650 -120.900 -30.098 1.00 65.36 ? 115 GLY F CA 1
ATOM 98 C CA . ARG B 2 17 ? -49.270 -122.580 -32.543 1.00 60.52 ? 116 ARG F CA 1
ATOM 99 C CA . ASP B 2 18 ? -51.128 -126.135 -33.222 1.00 57.55 ? 117 ASP F CA 1
ATOM 100 C CA . ALA B 2 19 ? -53.544 -128.957 -31.950 1.00 57.46 ? 118 ALA F CA 1
ATOM 101 C CA . ASN B 2 20 ? -51.758 -129.866 -28.739 1.00 45.45 ? 119 ASN F CA 1
ATOM 102 C CA . ASP B 2 21 ? -49.426 -126.968 -28.140 1.00 47.11 ? 120 ASP F CA 1
ATOM 103 C CA . THR B 2 22 ? -49.411 -126.243 -24.396 1.00 30.90 ? 121 THR F CA 1
ATOM 104 C CA . GLY B 2 23 ? -46.138 -124.405 -23.830 1.00 33.56 ? 122 GLY F CA 1
ATOM 105 C CA . SER B 2 24 ? -45.022 -122.703 -27.042 1.00 35.92 ? 123 SER F CA 1
ATOM 106 C CA . THR B 2 25 ? -43.269 -119.569 -25.650 1.00 40.52 ? 124 THR F CA 1
ATOM 107 C CA . GLU B 2 26 ? -45.940 -117.518 -27.241 1.00 43.37 ? 125 GLU F CA 1
ATOM 108 C CA . VAL B 2 27 ? -48.711 -118.983 -25.195 1.00 44.99 ? 126 VAL F CA 1
ATOM 109 C CA . GLN B 2 28 ? -46.402 -118.830 -22.204 1.00 46.30 ? 127 GLN F CA 1
ATOM 110 C CA . VAL B 2 29 ? -45.751 -115.129 -22.670 1.00 46.62 ? 128 VAL F CA 1
ATOM 111 C CA . ALA B 2 30 ? -49.286 -114.152 -23.603 1.00 50.24 ? 129 ALA F CA 1
ATOM 112 C CA . LEU B 2 31 ? -51.049 -115.659 -20.635 1.00 50.88 ? 130 LEU F CA 1
ATOM 113 C CA . LEU B 2 32 ? -48.092 -114.345 -18.652 1.00 52.34 ? 131 LEU F CA 1
ATOM 114 C CA . THR B 2 33 ? -48.975 -110.829 -19.767 1.00 58.44 ? 132 THR F CA 1
ATOM 115 C CA . ALA B 2 34 ? -52.581 -111.723 -18.985 1.00 61.71 ? 133 ALA F CA 1
ATOM 116 C CA . GLN B 2 35 ? -52.094 -112.112 -15.249 1.00 70.49 ? 134 GLN F CA 1
ATOM 117 C CA . ILE B 2 36 ? -49.544 -109.306 -15.239 1.00 63.90 ? 135 ILE F CA 1
ATOM 118 C CA . ASN B 2 37 ? -52.342 -106.860 -16.068 1.00 62.17 ? 136 ASN F CA 1
ATOM 119 C CA . HIS B 2 38 ? -54.964 -108.762 -14.076 1.00 60.52 ? 137 HIS F CA 1
ATOM 120 C CA . LEU B 2 39 ? -52.776 -107.900 -11.075 1.00 57.84 ? 138 LEU F CA 1
ATOM 121 C CA . GLN B 2 40 ? -51.495 -104.575 -12.126 1.00 68.33 ? 139 GLN F CA 1
ATOM 122 C CA . GLY B 2 41 ? -55.059 -103.539 -11.846 1.00 66.64 ? 140 GLY F CA 1
ATOM 123 C CA . HIS B 2 42 ? -55.363 -105.302 -8.484 1.00 63.41 ? 141 HIS F CA 1
ATOM 124 C CA . PHE B 2 43 ? -52.409 -103.500 -6.920 1.00 64.79 ? 142 PHE F CA 1
ATOM 125 C CA . ALA B 2 44 ? -54.263 -100.255 -7.788 1.00 70.83 ? 143 ALA F CA 1
ATOM 126 C CA . GLU B 2 45 ? -57.317 -100.809 -5.545 1.00 69.10 ? 144 GLU F CA 1
ATOM 127 C CA . HIS B 2 46 ? -54.986 -102.090 -2.783 1.00 76.62 ? 145 HIS F CA 1
ATOM 128 C CA . LYS B 2 47 ? -51.924 -99.821 -2.700 1.00 83.30 ? 146 LYS F CA 1
ATOM 129 C CA . LYS B 2 48 ? -50.973 -101.215 0.721 1.00 86.82 ? 147 LYS F CA 1
ATOM 130 C CA . ASP B 2 49 ? -50.618 -104.809 -0.499 1.00 89.16 ? 148 ASP F CA 1
ATOM 131 C CA . HIS B 2 50 ? -47.194 -104.839 -2.040 1.00 87.30 ? 149 HIS F CA 1
ATOM 132 C CA . HIS B 2 51 ? -46.563 -108.332 -0.954 1.00 75.88 ? 150 HIS F CA 1
ATOM 133 C CA . SER B 2 52 ? -48.212 -109.042 -4.134 1.00 59.14 ? 151 SER F CA 1
ATOM 134 C CA . ARG B 2 53 ? -45.884 -106.657 -5.841 1.00 57.10 ? 152 ARG F CA 1
ATOM 135 C CA . ARG B 2 54 ? -43.056 -109.157 -5.281 1.00 49.49 ? 153 ARG F CA 1
ATOM 136 C CA . GLY B 2 55 ? -44.717 -111.406 -7.821 1.00 46.62 ? 154 GLY F CA 1
ATOM 137 C CA . LEU B 2 56 ? -45.555 -108.574 -10.175 1.00 43.44 ? 155 LEU F CA 1
ATOM 138 C CA . LEU B 2 57 ? -41.787 -108.191 -10.496 1.00 51.16 ? 156 LEU F CA 1
ATOM 139 C CA . ARG B 2 58 ? -41.078 -111.892 -10.894 1.00 51.17 ? 157 ARG F CA 1
ATOM 140 C CA . MET B 2 59 ? -43.814 -112.390 -13.493 1.00 43.28 ? 158 MET F CA 1
ATOM 141 C CA . VAL B 2 60 ? -42.515 -109.334 -15.408 1.00 41.35 ? 159 VAL F CA 1
ATOM 142 C CA . SER B 2 61 ? -38.965 -110.679 -15.410 1.00 46.24 ? 160 SER F CA 1
ATOM 143 C CA . GLN B 2 62 ? -39.987 -114.149 -16.547 1.00 50.12 ? 161 GLN F CA 1
ATOM 144 C CA . ARG B 2 63 ? -42.020 -112.497 -19.320 1.00 43.91 ? 162 ARG F CA 1
ATOM 145 C CA . ARG B 2 64 ? -38.990 -110.615 -20.590 1.00 53.32 ? 163 ARG F CA 1
ATOM 146 C CA . LYS B 2 65 ? -36.718 -113.699 -20.399 1.00 47.98 ? 164 LYS F CA 1
ATOM 147 C CA . LEU B 2 66 ? -39.000 -115.787 -22.631 1.00 46.35 ? 165 LEU F CA 1
ATOM 148 C CA . LEU B 2 67 ? -39.384 -112.886 -25.081 1.00 47.84 ? 166 LEU F CA 1
ATOM 149 C CA . ASP B 2 68 ? -35.631 -112.507 -25.282 1.00 48.34 ? 167 ASP F CA 1
ATOM 150 C CA . TYR B 2 69 ? -35.303 -116.241 -25.820 1.00 48.01 ? 168 TYR F CA 1
ATOM 151 C CA . LEU B 2 70 ? -37.885 -116.154 -28.591 1.00 49.59 ? 169 LEU F CA 1
ATOM 152 C CA . LYS B 2 71 ? -36.105 -113.124 -30.047 1.00 66.87 ? 170 LYS F CA 1
ATOM 153 C CA . ARG B 2 72 ? -32.876 -115.055 -30.656 1.00 74.14 ? 171 ARG F CA 1
ATOM 154 C CA . LYS B 2 73 ? -34.198 -118.380 -31.912 1.00 79.06 ? 172 LYS F CA 1
ATOM 155 C CA . ASP B 2 74 ? -36.948 -116.813 -34.061 1.00 86.09 ? 173 ASP F CA 1
ATOM 156 C CA . VAL B 2 75 ? -36.974 -113.067 -34.940 1.00 87.12 ? 174 VAL F CA 1
ATOM 157 C CA . ALA B 2 76 ? -39.929 -113.128 -37.348 1.00 92.49 ? 175 ALA F CA 1
ATOM 158 C CA . ARG B 2 77 ? -42.184 -114.690 -34.714 1.00 83.29 ? 176 ARG F CA 1
ATOM 159 C CA . TYR B 2 78 ? -40.882 -112.215 -32.145 1.00 82.08 ? 177 TYR F CA 1
ATOM 160 C CA . THR B 2 79 ? -42.152 -109.289 -34.173 1.00 93.27 ? 178 THR F CA 1
ATOM 161 C CA . GLN B 2 80 ? -45.482 -110.990 -34.598 1.00 92.37 ? 179 GLN F CA 1
ATOM 162 C CA . LEU B 2 81 ? -46.000 -111.722 -30.920 1.00 80.47 ? 180 LEU F CA 1
ATOM 163 C CA . ILE B 2 82 ? -44.824 -108.326 -29.665 1.00 88.74 ? 181 ILE F CA 1
ATOM 164 C CA . GLU B 2 83 ? -47.878 -107.148 -31.563 1.00 95.03 ? 182 GLU F CA 1
ATOM 165 C CA . ARG B 2 84 ? -51.446 -107.961 -30.612 1.00 93.44 ? 183 ARG F CA 1
ATOM 166 C CA . LEU B 2 85 ? -50.017 -106.932 -27.311 1.00 94.57 ? 184 LEU F CA 1
ATOM 167 C CA . GLY B 2 86 ? -47.381 -104.335 -28.034 1.00 98.39 ? 185 GLY F CA 1
ATOM 168 C CA . LEU B 2 87 ? -43.885 -104.023 -26.544 1.00 0.34 ? 186 LEU F CA 1
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