data_2GOT
#
_entry.id 2GOT
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.388
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2GOT pdb_00002got 10.2210/pdb2got/pdb
NDB BD0094 ? ?
RCSB RCSB037375 ? ?
WWPDB D_1000037375 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2007-04-24
2 'Structure model' 1 1 2008-05-01
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-03-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.entry_id 2GOT
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.recvd_initial_deposition_date 2006-04-14
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 1UE3 'Original sequence crystallized under condition containing hexammine cobalt chloride.' unspecified
PDB 1UE4 'Original sequence crystallized under condition containing magnesium chloride.' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Kondo, J.' 1
'Sunami, T.' 2
'Takenaka, A.' 3
#
_citation.id primary
_citation.title
'The structure of a d(gcGAACgc) duplex containing two consecutive bulged A residues in both strands suggests a molecular switch'
_citation.journal_abbrev 'Acta Crystallogr.,Sect.D'
_citation.journal_volume 63
_citation.page_first 673
_citation.page_last 681
_citation.year 2007
_citation.journal_id_ASTM ABCRE6
_citation.country DK
_citation.journal_id_ISSN 0907-4449
_citation.journal_id_CSD 0766
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 17505105
_citation.pdbx_database_id_DOI 10.1107/S0907444907012607
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Kondo, J.' 1 ?
primary 'Sunami, T.' 2 ?
primary 'Takenaka, A.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*DGP*(CBR)P*DGP*DAP*DAP*DCP*DGP*DC)-3')
;
2515.515 2 ? ? ? ?
2 water nat water 18.015 5 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(CBR)(DG)(DA)(DA)(DC)(DG)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GCGAACGC
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 CBR n
1 3 DG n
1 4 DA n
1 5 DA n
1 6 DC n
1 7 DG n
1 8 DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'chemically synthesized'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CBR 'DNA linking' n "5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 Br N3 O7 P' 386.093
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG G A . n
A 1 2 CBR 2 2 2 CBR CBR A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DA 5 5 5 DA A A . n
A 1 6 DC 6 6 6 DC C A . n
A 1 7 DG 7 7 7 DG G A . n
A 1 8 DC 8 8 8 DC C A . n
B 1 1 DG 1 1 1 DG G B . n
B 1 2 CBR 2 2 2 CBR CBR B . n
B 1 3 DG 3 3 3 DG G B . n
B 1 4 DA 4 4 4 DA A B . n
B 1 5 DA 5 5 5 DA A B . n
B 1 6 DC 6 6 6 DC C B . n
B 1 7 DG 7 7 7 DG G B . n
B 1 8 DC 8 8 8 DC C B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HOH 1 9 1 HOH HOH A .
C 2 HOH 2 10 2 HOH HOH A .
C 2 HOH 3 11 4 HOH HOH A .
D 2 HOH 1 9 3 HOH HOH B .
D 2 HOH 2 10 5 HOH HOH B .
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling'
http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 1
REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement
http://www.ccp4.ac.uk/main.html Fortran_77 ? 2
PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C++ ? 3
DPS . ? ? ? ? 'data reduction' ? ? ? 4
MOSFLM . ? ? ? ? 'data reduction' ? ? ? 5
CCP4 . ? ? ? ? 'data scaling' ? ? ? 6
SOLVE . ? ? ? ? phasing ? ? ? 7
#
_cell.entry_id 2GOT
_cell.length_a 26.830
_cell.length_b 26.830
_cell.length_c 226.325
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 24
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 2GOT
_symmetry.space_group_name_H-M 'P 61 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 178
_symmetry.space_group_name_Hall ?
#
_exptl.crystals_number 1
_exptl.entry_id 2GOT
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.density_Matthews 2.24
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 43.7
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.temp 277
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_details
;40mM sodium cacodylate, 12mM spermine tetrahydrochloride, 80mM sodium chloride, 10%(v/v) 2-methyl-2,4-pentanediol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
;
_exptl_crystal_grow.pdbx_pH_range .
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 'sodium cacodylate' ? ? ?
1 2 1 'spermine tetrahydrochloride' ? ? ?
1 3 1 'sodium chloride' ? ? ?
1 4 1 2-methyl-2,4-pentanediol ? ? ?
1 5 1 HOH ? ? ?
1 6 2 'sodium cacodylate' ? ? ?
1 7 2 'sodium chloride' ? ? ?
1 8 2 HOH ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 4'
_diffrn_detector.pdbx_collection_date 2000-11-19
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_diffrn_protocol MAD
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 1.00 1.0
2 0.91955 1.0
3 0.92010 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B'
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list '1.00, 0.91955, 0.92010'
_diffrn_source.pdbx_synchrotron_site 'Photon Factory'
_diffrn_source.pdbx_synchrotron_beamline BL-18B
#
_reflns.entry_id 2GOT
_reflns.d_resolution_high 2.602
_reflns.d_resolution_low 25.147
_reflns.number_obs 1730
_reflns.pdbx_Rmerge_I_obs 0.054
_reflns.pdbx_netI_over_sigmaI 8.200
_reflns.pdbx_Rsym_value 0.054
_reflns.pdbx_redundancy 15.600
_reflns.percent_possible_obs 93.000
_reflns.number_all ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.B_iso_Wilson_estimate ?
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.number_measured_obs
_reflns_shell.number_measured_all
_reflns_shell.number_unique_obs
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_redundancy
_reflns_shell.percent_possible_obs
_reflns_shell.number_unique_all
_reflns_shell.percent_possible_all
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_ordinal
2.60 2.74 ? 2074 ? 0.266 2.5 0.266 ? 12.70 ? 163 64.90 ? 1
2.74 2.91 ? 2870 ? 0.159 4.1 0.159 ? 13.20 ? 218 91.30 ? 2
2.91 3.11 ? 3717 ? 0.103 5.9 0.103 ? 16.90 ? 220 99.80 ? 3
3.11 3.36 ? 4030 ? 0.055 8.8 0.055 ? 17.00 ? 237 99.80 ? 4
3.36 3.68 ? 3280 ? 0.052 7.8 0.052 ? 18.20 ? 180 99.70 ? 5
3.68 4.11 ? 3165 ? 0.052 11.3 0.052 ? 17.00 ? 186 99.60 ? 6
4.11 4.75 ? 2871 ? 0.049 10.8 0.049 ? 15.90 ? 180 99.50 ? 7
4.75 5.81 ? 2359 ? 0.047 11.2 0.047 ? 15.90 ? 148 99.30 ? 8
5.81 8.22 ? 1769 ? 0.044 11.7 0.044 ? 14.40 ? 123 98.90 ? 9
8.22 25.15 ? 883 ? 0.041 11.6 0.041 ? 11.80 ? 75 90.70 ? 10
#
_refine.entry_id 2GOT
_refine.ls_d_res_high 2.602
_refine.ls_d_res_low 25.147
_refine.pdbx_ls_sigma_F 0.00
_refine.ls_percent_reflns_obs 92.900
_refine.ls_number_reflns_obs 1726
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.ls_R_factor_obs 0.254
_refine.ls_R_factor_R_work 0.253
_refine.ls_R_factor_R_free 0.269
_refine.ls_percent_reflns_R_free 9.200
_refine.ls_number_reflns_R_free 158
_refine.B_iso_mean 30.435
_refine.aniso_B[1][1] 1.360
_refine.aniso_B[2][2] 1.360
_refine.aniso_B[3][3] -2.040
_refine.aniso_B[1][2] 0.680
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] 0.000
_refine.correlation_coeff_Fo_to_Fc 0.932
_refine.correlation_coeff_Fo_to_Fc_free 0.914
_refine.pdbx_overall_ESU_R 2.270
_refine.pdbx_overall_ESU_R_Free 0.366
_refine.overall_SU_ML 0.268
_refine.overall_SU_B 12.436
_refine.solvent_model_details 'BABINET MODEL WITH MASK'
_refine.pdbx_solvent_vdw_probe_radii 1.400
_refine.pdbx_solvent_ion_probe_radii 0.800
_refine.pdbx_solvent_shrinkage_radii 0.800
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.ls_R_factor_all ?
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 378
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 5
_refine_hist.number_atoms_total 383
_refine_hist.d_res_high 2.602
_refine_hist.d_res_low 25.147
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 426 0.017 0.021 ? 'X-RAY DIFFRACTION' ?
r_bond_other_d 164 0.004 0.020 ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 658 2.654 3.000 ? 'X-RAY DIFFRACTION' ?
r_angle_other_deg 422 2.045 3.000 ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 56 0.182 0.200 ? 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 194 0.012 0.020 ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 80 0.171 0.200 ? 'X-RAY DIFFRACTION' ?
r_nbd_other 179 0.221 0.200 ? 'X-RAY DIFFRACTION' ?
r_nbtor_other 107 0.112 0.200 ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 4 0.185 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 27 0.118 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other 30 0.420 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 9 0.120 0.200 ? 'X-RAY DIFFRACTION' ?
r_scbond_it 426 3.061 3.000 ? 'X-RAY DIFFRACTION' ?
r_scangle_it 658 4.841 4.500 ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.d_res_high 2.603
_refine_ls_shell.d_res_low 2.670
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.percent_reflns_obs ?
_refine_ls_shell.number_reflns_R_work 71
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_R_work 0.461
_refine_ls_shell.R_factor_R_free 0.807
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 3
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs 74
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 dna_free.param ? 'X-RAY DIFFRACTION'
2 brc.param ? 'X-RAY DIFFRACTION'
3 ion.param ? 'X-RAY DIFFRACTION'
4 water.param ? 'X-RAY DIFFRACTION'
#
_struct.entry_id 2GOT
_struct.title 'Crystal structure of d(GCGAACGC): two types of bulge-containing duplexes'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2GOT
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text
'intra-duplex and inter-duplex hand-in-pocket motifs, bulge-containing duplex, base-intercalated duplex, single stranded DNA, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 2GOT
_struct_ref.pdbx_db_accession 2GOT
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code GCGAACGC
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 2GOT A 1 ? 8 ? 2GOT 1 ? 8 ? 1 8
2 1 2GOT B 1 ? 8 ? 2GOT 1 ? 8 ? 1 8
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 author_defined_assembly ? dimeric 2
2 author_defined_assembly ? dimeric 2
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1,2 A,C
2 1,3 B,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 37.7208333333
3 'crystal symmetry operation' 8_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A CBR 2 P ? ? A DG 1 A CBR 2 1_555 ? ? ? ? ? ? ? 1.589 ? ?
covale2 covale both ? A CBR 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A CBR 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.605 ? ?
covale3 covale both ? B DG 1 "O3'" ? ? ? 1_555 B CBR 2 P ? ? B DG 1 B CBR 2 1_555 ? ? ? ? ? ? ? 1.591 ? ?
covale4 covale both ? B CBR 2 "O3'" ? ? ? 1_555 B DG 3 P ? ? B CBR 2 B DG 3 1_555 ? ? ? ? ? ? ? 1.598 ? ?
hydrog1 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DA 5 N1 ? ? A DG 3 A DA 5 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ?
hydrog2 hydrog ? ? A DG 3 N3 ? ? ? 1_555 A DA 5 N6 ? ? A DG 3 A DA 5 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ?
hydrog3 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DA 5 N1 ? ? A DG 7 B DA 5 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ?
hydrog4 hydrog ? ? A DG 7 N3 ? ? ? 1_555 B DA 5 N6 ? ? A DG 7 B DA 5 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 N1 A DG 1 ? ? C2 A DG 1 ? ? 1.321 1.373 -0.052 0.008 N
2 1 "O3'" A DG 3 ? ? "C3'" A DG 3 ? ? 1.358 1.419 -0.061 0.006 N
3 1 "O3'" A DC 6 ? ? "C3'" A DC 6 ? ? 1.382 1.419 -0.037 0.006 N
4 1 "O3'" A DC 8 ? ? "C3'" A DC 8 ? ? 1.366 1.419 -0.053 0.006 N
5 1 "C1'" B DA 4 ? A N9 B DA 4 ? A 1.336 1.468 -0.132 0.014 N
6 1 "C1'" B DA 4 ? B N9 B DA 4 ? B 1.380 1.468 -0.088 0.014 N
7 1 "O3'" B DG 7 ? ? "C3'" B DG 7 ? ? 1.378 1.419 -0.041 0.006 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 112.23 108.30 3.93 0.30 N
2 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.28 108.30 2.98 0.30 N
3 1 "O5'" A DC 8 ? ? P A DC 8 ? ? OP1 A DC 8 ? ? 98.61 105.70 -7.09 0.90 N
4 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 99.96 104.50 -4.54 0.40 N
5 1 "O4'" B DG 1 ? ? "C1'" B DG 1 ? ? N9 B DG 1 ? ? 101.88 108.00 -6.12 0.70 N
6 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 110.38 108.30 2.08 0.30 N
7 1 "O4'" B DA 4 ? A "C4'" B DA 4 ? A "C3'" B DA 4 ? A 101.87 104.50 -2.63 0.40 N
8 1 N9 B DA 4 ? A "C1'" B DA 4 ? A "C2'" B DA 4 ? A 134.20 114.30 19.90 1.40 N
9 1 "O4'" B DA 4 ? A "C1'" B DA 4 ? A N9 B DA 4 ? A 101.87 108.00 -6.13 0.70 N
10 1 "O4'" B DA 4 ? B "C1'" B DA 4 ? B N9 B DA 4 ? B 124.67 108.30 16.37 0.30 N
11 1 "O4'" B DA 5 ? ? "C1'" B DA 5 ? ? N9 B DA 5 ? ? 116.27 108.30 7.97 0.30 N
12 1 "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 110.22 108.30 1.92 0.30 N
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A CBR 2 A CBR 2 ? DC ?
2 B CBR 2 B CBR 2 ? DC ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CBR BR BR N N 1
CBR P P N N 2
CBR OP1 O N N 3
CBR OP2 O N N 4
CBR "O5'" O N N 5
CBR N1 N N N 6
CBR C6 C N N 7
CBR C2 C N N 8
CBR O2 O N N 9
CBR N3 N N N 10
CBR C4 C N N 11
CBR N4 N N N 12
CBR C5 C N N 13
CBR "C2'" C N N 14
CBR "C5'" C N N 15
CBR "C4'" C N R 16
CBR "O4'" O N N 17
CBR "C1'" C N R 18
CBR "C3'" C N S 19
CBR "O3'" O N N 20
CBR OP3 O N N 21
CBR HOP2 H N N 22
CBR H6 H N N 23
CBR H41 H N N 24
CBR H42 H N N 25
CBR "H2'" H N N 26
CBR "H2''" H N N 27
CBR "H5'" H N N 28
CBR "H5''" H N N 29
CBR "H4'" H N N 30
CBR "H1'" H N N 31
CBR "H3'" H N N 32
CBR "HO3'" H N N 33
CBR HOP3 H N N 34
DA OP3 O N N 35
DA P P N N 36
DA OP1 O N N 37
DA OP2 O N N 38
DA "O5'" O N N 39
DA "C5'" C N N 40
DA "C4'" C N R 41
DA "O4'" O N N 42
DA "C3'" C N S 43
DA "O3'" O N N 44
DA "C2'" C N N 45
DA "C1'" C N R 46
DA N9 N Y N 47
DA C8 C Y N 48
DA N7 N Y N 49
DA C5 C Y N 50
DA C6 C Y N 51
DA N6 N N N 52
DA N1 N Y N 53
DA C2 C Y N 54
DA N3 N Y N 55
DA C4 C Y N 56
DA HOP3 H N N 57
DA HOP2 H N N 58
DA "H5'" H N N 59
DA "H5''" H N N 60
DA "H4'" H N N 61
DA "H3'" H N N 62
DA "HO3'" H N N 63
DA "H2'" H N N 64
DA "H2''" H N N 65
DA "H1'" H N N 66
DA H8 H N N 67
DA H61 H N N 68
DA H62 H N N 69
DA H2 H N N 70
DC OP3 O N N 71
DC P P N N 72
DC OP1 O N N 73
DC OP2 O N N 74
DC "O5'" O N N 75
DC "C5'" C N N 76
DC "C4'" C N R 77
DC "O4'" O N N 78
DC "C3'" C N S 79
DC "O3'" O N N 80
DC "C2'" C N N 81
DC "C1'" C N R 82
DC N1 N N N 83
DC C2 C N N 84
DC O2 O N N 85
DC N3 N N N 86
DC C4 C N N 87
DC N4 N N N 88
DC C5 C N N 89
DC C6 C N N 90
DC HOP3 H N N 91
DC HOP2 H N N 92
DC "H5'" H N N 93
DC "H5''" H N N 94
DC "H4'" H N N 95
DC "H3'" H N N 96
DC "HO3'" H N N 97
DC "H2'" H N N 98
DC "H2''" H N N 99
DC "H1'" H N N 100
DC H41 H N N 101
DC H42 H N N 102
DC H5 H N N 103
DC H6 H N N 104
DG OP3 O N N 105
DG P P N N 106
DG OP1 O N N 107
DG OP2 O N N 108
DG "O5'" O N N 109
DG "C5'" C N N 110
DG "C4'" C N R 111
DG "O4'" O N N 112
DG "C3'" C N S 113
DG "O3'" O N N 114
DG "C2'" C N N 115
DG "C1'" C N R 116
DG N9 N Y N 117
DG C8 C Y N 118
DG N7 N Y N 119
DG C5 C Y N 120
DG C6 C N N 121
DG O6 O N N 122
DG N1 N N N 123
DG C2 C N N 124
DG N2 N N N 125
DG N3 N N N 126
DG C4 C Y N 127
DG HOP3 H N N 128
DG HOP2 H N N 129
DG "H5'" H N N 130
DG "H5''" H N N 131
DG "H4'" H N N 132
DG "H3'" H N N 133
DG "HO3'" H N N 134
DG "H2'" H N N 135
DG "H2''" H N N 136
DG "H1'" H N N 137
DG H8 H N N 138
DG H1 H N N 139
DG H21 H N N 140
DG H22 H N N 141
HOH O O N N 142
HOH H1 H N N 143
HOH H2 H N N 144
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CBR BR C5 sing N N 1
CBR P OP1 doub N N 2
CBR P OP2 sing N N 3
CBR P "O5'" sing N N 4
CBR P OP3 sing N N 5
CBR OP2 HOP2 sing N N 6
CBR "O5'" "C5'" sing N N 7
CBR N1 C6 sing N N 8
CBR N1 C2 sing N N 9
CBR N1 "C1'" sing N N 10
CBR C6 C5 doub N N 11
CBR C6 H6 sing N N 12
CBR C2 O2 doub N N 13
CBR C2 N3 sing N N 14
CBR N3 C4 doub N N 15
CBR C4 N4 sing N N 16
CBR C4 C5 sing N N 17
CBR N4 H41 sing N N 18
CBR N4 H42 sing N N 19
CBR "C2'" "C1'" sing N N 20
CBR "C2'" "C3'" sing N N 21
CBR "C2'" "H2'" sing N N 22
CBR "C2'" "H2''" sing N N 23
CBR "C5'" "C4'" sing N N 24
CBR "C5'" "H5'" sing N N 25
CBR "C5'" "H5''" sing N N 26
CBR "C4'" "O4'" sing N N 27
CBR "C4'" "C3'" sing N N 28
CBR "C4'" "H4'" sing N N 29
CBR "O4'" "C1'" sing N N 30
CBR "C1'" "H1'" sing N N 31
CBR "C3'" "O3'" sing N N 32
CBR "C3'" "H3'" sing N N 33
CBR "O3'" "HO3'" sing N N 34
CBR OP3 HOP3 sing N N 35
DA OP3 P sing N N 36
DA OP3 HOP3 sing N N 37
DA P OP1 doub N N 38
DA P OP2 sing N N 39
DA P "O5'" sing N N 40
DA OP2 HOP2 sing N N 41
DA "O5'" "C5'" sing N N 42
DA "C5'" "C4'" sing N N 43
DA "C5'" "H5'" sing N N 44
DA "C5'" "H5''" sing N N 45
DA "C4'" "O4'" sing N N 46
DA "C4'" "C3'" sing N N 47
DA "C4'" "H4'" sing N N 48
DA "O4'" "C1'" sing N N 49
DA "C3'" "O3'" sing N N 50
DA "C3'" "C2'" sing N N 51
DA "C3'" "H3'" sing N N 52
DA "O3'" "HO3'" sing N N 53
DA "C2'" "C1'" sing N N 54
DA "C2'" "H2'" sing N N 55
DA "C2'" "H2''" sing N N 56
DA "C1'" N9 sing N N 57
DA "C1'" "H1'" sing N N 58
DA N9 C8 sing Y N 59
DA N9 C4 sing Y N 60
DA C8 N7 doub Y N 61
DA C8 H8 sing N N 62
DA N7 C5 sing Y N 63
DA C5 C6 sing Y N 64
DA C5 C4 doub Y N 65
DA C6 N6 sing N N 66
DA C6 N1 doub Y N 67
DA N6 H61 sing N N 68
DA N6 H62 sing N N 69
DA N1 C2 sing Y N 70
DA C2 N3 doub Y N 71
DA C2 H2 sing N N 72
DA N3 C4 sing Y N 73
DC OP3 P sing N N 74
DC OP3 HOP3 sing N N 75
DC P OP1 doub N N 76
DC P OP2 sing N N 77
DC P "O5'" sing N N 78
DC OP2 HOP2 sing N N 79
DC "O5'" "C5'" sing N N 80
DC "C5'" "C4'" sing N N 81
DC "C5'" "H5'" sing N N 82
DC "C5'" "H5''" sing N N 83
DC "C4'" "O4'" sing N N 84
DC "C4'" "C3'" sing N N 85
DC "C4'" "H4'" sing N N 86
DC "O4'" "C1'" sing N N 87
DC "C3'" "O3'" sing N N 88
DC "C3'" "C2'" sing N N 89
DC "C3'" "H3'" sing N N 90
DC "O3'" "HO3'" sing N N 91
DC "C2'" "C1'" sing N N 92
DC "C2'" "H2'" sing N N 93
DC "C2'" "H2''" sing N N 94
DC "C1'" N1 sing N N 95
DC "C1'" "H1'" sing N N 96
DC N1 C2 sing N N 97
DC N1 C6 sing N N 98
DC C2 O2 doub N N 99
DC C2 N3 sing N N 100
DC N3 C4 doub N N 101
DC C4 N4 sing N N 102
DC C4 C5 sing N N 103
DC N4 H41 sing N N 104
DC N4 H42 sing N N 105
DC C5 C6 doub N N 106
DC C5 H5 sing N N 107
DC C6 H6 sing N N 108
DG OP3 P sing N N 109
DG OP3 HOP3 sing N N 110
DG P OP1 doub N N 111
DG P OP2 sing N N 112
DG P "O5'" sing N N 113
DG OP2 HOP2 sing N N 114
DG "O5'" "C5'" sing N N 115
DG "C5'" "C4'" sing N N 116
DG "C5'" "H5'" sing N N 117
DG "C5'" "H5''" sing N N 118
DG "C4'" "O4'" sing N N 119
DG "C4'" "C3'" sing N N 120
DG "C4'" "H4'" sing N N 121
DG "O4'" "C1'" sing N N 122
DG "C3'" "O3'" sing N N 123
DG "C3'" "C2'" sing N N 124
DG "C3'" "H3'" sing N N 125
DG "O3'" "HO3'" sing N N 126
DG "C2'" "C1'" sing N N 127
DG "C2'" "H2'" sing N N 128
DG "C2'" "H2''" sing N N 129
DG "C1'" N9 sing N N 130
DG "C1'" "H1'" sing N N 131
DG N9 C8 sing Y N 132
DG N9 C4 sing Y N 133
DG C8 N7 doub Y N 134
DG C8 H8 sing N N 135
DG N7 C5 sing Y N 136
DG C5 C6 sing N N 137
DG C5 C4 doub Y N 138
DG C6 O6 doub N N 139
DG C6 N1 sing N N 140
DG N1 C2 sing N N 141
DG N1 H1 sing N N 142
DG C2 N2 sing N N 143
DG C2 N3 doub N N 144
DG N2 H21 sing N N 145
DG N2 H22 sing N N 146
DG N3 C4 sing N N 147
HOH O H1 sing N N 148
HOH O H2 sing N N 149
#
_ndb_struct_conf_na.entry_id 2GOT
_ndb_struct_conf_na.feature 'double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 3 1_555 A DA 5 1_555 3.313 -3.821 0.102 15.968 -14.830 -60.663 1 A_DG3:DA5_A A 3 ? A 5 ? 10 6
1 A DG 7 1_555 B DA 5 1_555 3.057 -3.893 0.156 16.249 -21.854 -65.194 2 A_DG7:DA5_B A 7 ? B 5 ? 10 6
#
_atom_sites.entry_id 2GOT
_atom_sites.fract_transf_matrix[1][1] 0.037272
_atom_sites.fract_transf_matrix[1][2] 0.021519
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.043038
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.004418
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
BR
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 19.014 -4.769 27.385 1.00 49.77 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? 18.034 -4.416 26.395 1.00 46.92 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 17.038 -3.386 26.936 1.00 44.96 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 17.664 -2.072 27.084 1.00 42.29 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 15.858 -3.083 26.024 1.00 43.41 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 14.855 -2.562 26.838 1.00 45.79 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 16.472 -2.081 25.052 1.00 40.70 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 17.331 -1.226 25.998 1.00 36.57 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 18.616 -0.716 25.530 1.00 27.50 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 19.575 -1.340 24.766 1.00 24.66 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 20.655 -0.613 24.525 1.00 20.75 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 20.363 0.577 25.187 1.00 20.55 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 21.109 1.744 25.319 1.00 16.71 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 22.226 1.998 24.879 1.00 20.59 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 20.491 2.691 26.083 1.00 12.62 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 19.289 2.603 26.624 1.00 12.78 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 18.929 3.685 27.297 1.00 8.83 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 18.537 1.528 26.542 1.00 20.96 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 19.134 0.543 25.804 1.00 23.01 ? 1 DG A C4 1
HETATM 20 BR BR . CBR A 1 2 ? 17.699 -0.316 21.871 1.00 50.83 ? 2 CBR A BR 1
HETATM 21 P P . CBR A 1 2 ? 13.411 -2.251 26.251 1.00 51.85 ? 2 CBR A P 1
HETATM 22 O OP1 . CBR A 1 2 ? 12.504 -2.614 27.376 1.00 48.60 ? 2 CBR A OP1 1
HETATM 23 O OP2 . CBR A 1 2 ? 13.387 -2.727 24.830 1.00 48.35 ? 2 CBR A OP2 1
HETATM 24 O "O5'" . CBR A 1 2 ? 13.351 -0.658 26.128 1.00 51.03 ? 2 CBR A "O5'" 1
HETATM 25 N N1 . CBR A 1 2 ? 16.072 2.445 24.223 1.00 38.07 ? 2 CBR A N1 1
HETATM 26 C C6 . CBR A 1 2 ? 16.323 1.335 23.506 1.00 35.69 ? 2 CBR A C6 1
HETATM 27 C C2 . CBR A 1 2 ? 16.948 3.547 24.229 1.00 34.51 ? 2 CBR A C2 1
HETATM 28 O O2 . CBR A 1 2 ? 16.663 4.555 24.889 1.00 30.26 ? 2 CBR A O2 1
HETATM 29 N N3 . CBR A 1 2 ? 18.074 3.471 23.492 1.00 32.05 ? 2 CBR A N3 1
HETATM 30 C C4 . CBR A 1 2 ? 18.330 2.364 22.787 1.00 34.57 ? 2 CBR A C4 1
HETATM 31 N N4 . CBR A 1 2 ? 19.489 2.355 22.102 1.00 28.89 ? 2 CBR A N4 1
HETATM 32 C C5 . CBR A 1 2 ? 17.423 1.243 22.791 1.00 35.89 ? 2 CBR A C5 1
HETATM 33 C "C2'" . CBR A 1 2 ? 13.512 2.182 24.380 1.00 46.54 ? 2 CBR A "C2'" 1
HETATM 34 C "C5'" . CBR A 1 2 ? 13.383 0.213 27.266 1.00 50.44 ? 2 CBR A "C5'" 1
HETATM 35 C "C4'" . CBR A 1 2 ? 13.708 1.596 26.746 1.00 48.88 ? 2 CBR A "C4'" 1
HETATM 36 O "O4'" . CBR A 1 2 ? 14.958 1.524 26.012 1.00 47.21 ? 2 CBR A "O4'" 1
HETATM 37 C "C1'" . CBR A 1 2 ? 14.851 2.508 25.021 1.00 44.41 ? 2 CBR A "C1'" 1
HETATM 38 C "C3'" . CBR A 1 2 ? 12.710 2.079 25.693 1.00 48.80 ? 2 CBR A "C3'" 1
HETATM 39 O "O3'" . CBR A 1 2 ? 12.080 3.290 26.083 1.00 49.42 ? 2 CBR A "O3'" 1
ATOM 40 P P . DG A 1 3 ? 10.645 3.562 25.417 1.00 51.52 ? 3 DG A P 1
ATOM 41 O OP1 . DG A 1 3 ? 9.737 3.515 26.596 1.00 49.79 ? 3 DG A OP1 1
ATOM 42 O OP2 . DG A 1 3 ? 10.524 2.749 24.151 1.00 47.66 ? 3 DG A OP2 1
ATOM 43 O "O5'" . DG A 1 3 ? 10.665 5.076 24.935 1.00 45.91 ? 3 DG A "O5'" 1
ATOM 44 C "C5'" . DG A 1 3 ? 11.341 6.061 25.703 1.00 42.30 ? 3 DG A "C5'" 1
ATOM 45 C "C4'" . DG A 1 3 ? 11.906 7.106 24.760 1.00 38.11 ? 3 DG A "C4'" 1
ATOM 46 O "O4'" . DG A 1 3 ? 13.051 6.651 24.004 1.00 34.29 ? 3 DG A "O4'" 1
ATOM 47 C "C3'" . DG A 1 3 ? 10.897 7.519 23.706 1.00 34.85 ? 3 DG A "C3'" 1
ATOM 48 O "O3'" . DG A 1 3 ? 11.099 8.852 23.543 1.00 32.80 ? 3 DG A "O3'" 1
ATOM 49 C "C2'" . DG A 1 3 ? 11.260 6.711 22.479 1.00 34.11 ? 3 DG A "C2'" 1
ATOM 50 C "C1'" . DG A 1 3 ? 12.763 6.733 22.634 1.00 33.47 ? 3 DG A "C1'" 1
ATOM 51 N N9 . DG A 1 3 ? 13.467 5.649 21.989 1.00 33.15 ? 3 DG A N9 1
ATOM 52 C C8 . DG A 1 3 ? 13.008 4.416 21.638 1.00 34.34 ? 3 DG A C8 1
ATOM 53 N N7 . DG A 1 3 ? 13.918 3.659 21.112 1.00 33.96 ? 3 DG A N7 1
ATOM 54 C C5 . DG A 1 3 ? 15.047 4.460 21.097 1.00 31.20 ? 3 DG A C5 1
ATOM 55 C C6 . DG A 1 3 ? 16.337 4.187 20.633 1.00 30.50 ? 3 DG A C6 1
ATOM 56 O O6 . DG A 1 3 ? 16.781 3.152 20.088 1.00 30.38 ? 3 DG A O6 1
ATOM 57 N N1 . DG A 1 3 ? 17.157 5.280 20.825 1.00 29.42 ? 3 DG A N1 1
ATOM 58 C C2 . DG A 1 3 ? 16.806 6.478 21.399 1.00 28.59 ? 3 DG A C2 1
ATOM 59 N N2 . DG A 1 3 ? 17.751 7.416 21.525 1.00 24.06 ? 3 DG A N2 1
ATOM 60 N N3 . DG A 1 3 ? 15.615 6.736 21.844 1.00 30.14 ? 3 DG A N3 1
ATOM 61 C C4 . DG A 1 3 ? 14.792 5.680 21.642 1.00 32.06 ? 3 DG A C4 1
ATOM 62 P P A DA A 1 4 ? 9.865 9.799 23.781 0.50 32.52 ? 4 DA A P 1
ATOM 63 P P B DA A 1 4 ? 9.868 9.811 23.700 0.50 30.10 ? 4 DA A P 1
ATOM 64 O OP1 A DA A 1 4 ? 9.557 9.802 25.220 0.50 33.27 ? 4 DA A OP1 1
ATOM 65 O OP1 B DA A 1 4 ? 9.509 9.883 25.125 0.50 30.87 ? 4 DA A OP1 1
ATOM 66 O OP2 A DA A 1 4 ? 8.906 9.377 22.743 0.50 33.55 ? 4 DA A OP2 1
ATOM 67 O OP2 B DA A 1 4 ? 8.968 9.343 22.629 0.50 30.49 ? 4 DA A OP2 1
ATOM 68 O "O5'" A DA A 1 4 ? 10.487 11.203 23.435 0.50 31.26 ? 4 DA A "O5'" 1
ATOM 69 O "O5'" B DA A 1 4 ? 10.521 11.194 23.322 0.50 27.94 ? 4 DA A "O5'" 1
ATOM 70 C "C5'" A DA A 1 4 ? 10.979 12.054 24.426 0.50 30.11 ? 4 DA A "C5'" 1
ATOM 71 C "C5'" B DA A 1 4 ? 10.991 12.069 24.301 0.50 25.99 ? 4 DA A "C5'" 1
ATOM 72 C "C4'" A DA A 1 4 ? 11.682 13.185 23.708 0.50 28.59 ? 4 DA A "C4'" 1
ATOM 73 C "C4'" B DA A 1 4 ? 11.744 13.162 23.577 0.50 24.14 ? 4 DA A "C4'" 1
ATOM 74 O "O4'" A DA A 1 4 ? 12.626 12.570 22.812 0.50 27.46 ? 4 DA A "O4'" 1
ATOM 75 O "O4'" B DA A 1 4 ? 12.816 12.519 22.860 0.50 22.45 ? 4 DA A "O4'" 1
ATOM 76 C "C3'" A DA A 1 4 ? 10.787 14.028 22.822 0.50 27.08 ? 4 DA A "C3'" 1
ATOM 77 C "C3'" B DA A 1 4 ? 10.953 13.884 22.508 0.50 22.86 ? 4 DA A "C3'" 1
ATOM 78 O "O3'" A DA A 1 4 ? 11.290 15.332 22.679 0.50 29.60 ? 4 DA A "O3'" 1
ATOM 79 O "O3'" B DA A 1 4 ? 11.418 15.227 22.372 0.50 27.29 ? 4 DA A "O3'" 1
ATOM 80 C "C2'" A DA A 1 4 ? 10.825 13.257 21.509 0.50 25.24 ? 4 DA A "C2'" 1
ATOM 81 C "C2'" B DA A 1 4 ? 11.246 13.000 21.293 0.50 20.38 ? 4 DA A "C2'" 1
ATOM 82 C "C1'" A DA A 1 4 ? 12.281 12.823 21.470 0.50 26.08 ? 4 DA A "C1'" 1
ATOM 83 C "C1'" B DA A 1 4 ? 12.748 12.851 21.489 0.50 20.22 ? 4 DA A "C1'" 1
ATOM 84 N N9 A DA A 1 4 ? 12.636 11.633 20.697 0.50 25.73 ? 4 DA A N9 1
ATOM 85 N N9 B DA A 1 4 ? 13.510 11.847 20.736 0.50 16.50 ? 4 DA A N9 1
ATOM 86 C C8 A DA A 1 4 ? 13.898 11.300 20.284 0.50 23.85 ? 4 DA A C8 1
ATOM 87 C C8 B DA A 1 4 ? 13.083 10.639 20.273 0.50 16.29 ? 4 DA A C8 1
ATOM 88 N N7 A DA A 1 4 ? 13.942 10.177 19.604 0.50 25.41 ? 4 DA A N7 1
ATOM 89 N N7 B DA A 1 4 ? 14.006 9.960 19.639 0.50 15.69 ? 4 DA A N7 1
ATOM 90 C C5 A DA A 1 4 ? 12.626 9.741 19.568 0.50 26.88 ? 4 DA A C5 1
ATOM 91 C C5 B DA A 1 4 ? 15.135 10.767 19.701 0.50 14.17 ? 4 DA A C5 1
ATOM 92 C C6 A DA A 1 4 ? 11.982 8.611 19.011 0.50 28.18 ? 4 DA A C6 1
ATOM 93 C C6 B DA A 1 4 ? 16.463 10.624 19.221 0.50 12.96 ? 4 DA A C6 1
ATOM 94 N N6 A DA A 1 4 ? 12.626 7.657 18.344 0.50 28.35 ? 4 DA A N6 1
ATOM 95 N N6 B DA A 1 4 ? 16.935 9.558 18.566 0.50 12.91 ? 4 DA A N6 1
ATOM 96 N N1 A DA A 1 4 ? 10.644 8.468 19.169 0.50 28.99 ? 4 DA A N1 1
ATOM 97 N N1 B DA A 1 4 ? 17.335 11.615 19.452 0.50 12.93 ? 4 DA A N1 1
ATOM 98 C C2 A DA A 1 4 ? 9.979 9.407 19.834 0.50 28.72 ? 4 DA A C2 1
ATOM 99 C C2 B DA A 1 4 ? 16.899 12.689 20.116 0.50 15.97 ? 4 DA A C2 1
ATOM 100 N N3 A DA A 1 4 ? 10.467 10.510 20.394 0.50 29.15 ? 4 DA A N3 1
ATOM 101 N N3 B DA A 1 4 ? 15.678 12.938 20.620 0.50 16.55 ? 4 DA A N3 1
ATOM 102 C C4 A DA A 1 4 ? 11.805 10.628 20.237 0.50 27.18 ? 4 DA A C4 1
ATOM 103 C C4 B DA A 1 4 ? 14.832 11.927 20.381 0.50 14.66 ? 4 DA A C4 1
ATOM 104 P P A DA A 1 5 ? 11.537 16.324 23.918 0.50 33.41 ? 5 DA A P 1
ATOM 105 P P B DA A 1 5 ? 11.590 16.272 23.590 0.50 33.54 ? 5 DA A P 1
ATOM 106 O OP1 A DA A 1 5 ? 11.027 15.759 25.186 0.50 33.50 ? 5 DA A OP1 1
ATOM 107 O OP1 B DA A 1 5 ? 10.775 15.859 24.754 0.50 33.83 ? 5 DA A OP1 1
ATOM 108 O OP2 A DA A 1 5 ? 11.095 17.651 23.435 0.50 33.75 ? 5 DA A OP2 1
ATOM 109 O OP2 B DA A 1 5 ? 11.410 17.621 22.991 0.50 33.73 ? 5 DA A OP2 1
ATOM 110 O "O5'" A DA A 1 5 ? 13.137 16.231 23.981 0.50 33.80 ? 5 DA A "O5'" 1
ATOM 111 O "O5'" B DA A 1 5 ? 13.136 16.048 23.995 0.50 33.80 ? 5 DA A "O5'" 1
ATOM 112 C "C5'" A DA A 1 5 ? 13.857 17.030 24.874 0.50 33.97 ? 5 DA A "C5'" 1
ATOM 113 C "C5'" B DA A 1 5 ? 13.837 16.957 24.836 0.50 34.17 ? 5 DA A "C5'" 1
ATOM 114 C "C4'" . DA A 1 5 ? 15.344 16.700 24.876 1.00 33.20 ? 5 DA A "C4'" 1
ATOM 115 O "O4'" . DA A 1 5 ? 15.622 15.410 25.446 1.00 33.00 ? 5 DA A "O4'" 1
ATOM 116 C "C3'" . DA A 1 5 ? 16.026 16.652 23.538 1.00 32.34 ? 5 DA A "C3'" 1
ATOM 117 O "O3'" . DA A 1 5 ? 17.326 17.190 23.742 1.00 33.51 ? 5 DA A "O3'" 1
ATOM 118 C "C2'" . DA A 1 5 ? 16.058 15.188 23.166 1.00 30.54 ? 5 DA A "C2'" 1
ATOM 119 C "C1'" . DA A 1 5 ? 16.261 14.540 24.524 1.00 31.11 ? 5 DA A "C1'" 1
ATOM 120 N N9 . DA A 1 5 ? 15.703 13.167 24.569 1.00 28.34 ? 5 DA A N9 1
ATOM 121 C C8 . DA A 1 5 ? 14.614 12.686 25.231 1.00 26.66 ? 5 DA A C8 1
ATOM 122 N N7 . DA A 1 5 ? 14.383 11.428 25.031 1.00 26.08 ? 5 DA A N7 1
ATOM 123 C C5 . DA A 1 5 ? 15.397 11.058 24.178 1.00 24.75 ? 5 DA A C5 1
ATOM 124 C C6 . DA A 1 5 ? 15.723 9.851 23.556 1.00 24.34 ? 5 DA A C6 1
ATOM 125 N N6 . DA A 1 5 ? 15.048 8.718 23.722 1.00 27.15 ? 5 DA A N6 1
ATOM 126 N N1 . DA A 1 5 ? 16.765 9.828 22.728 1.00 23.43 ? 5 DA A N1 1
ATOM 127 C C2 . DA A 1 5 ? 17.473 10.938 22.563 1.00 23.43 ? 5 DA A C2 1
ATOM 128 N N3 . DA A 1 5 ? 17.269 12.137 23.066 1.00 25.59 ? 5 DA A N3 1
ATOM 129 C C4 . DA A 1 5 ? 16.201 12.114 23.875 1.00 25.70 ? 5 DA A C4 1
ATOM 130 P P . DC A 1 6 ? 17.833 18.429 22.837 1.00 36.95 ? 6 DC A P 1
ATOM 131 O OP1 . DC A 1 6 ? 19.108 18.719 23.542 1.00 38.50 ? 6 DC A OP1 1
ATOM 132 O OP2 . DC A 1 6 ? 16.725 19.440 22.618 1.00 29.31 ? 6 DC A OP2 1
ATOM 133 O "O5'" . DC A 1 6 ? 18.097 17.784 21.409 1.00 29.44 ? 6 DC A "O5'" 1
ATOM 134 C "C5'" . DC A 1 6 ? 19.031 16.767 21.296 1.00 31.23 ? 6 DC A "C5'" 1
ATOM 135 C "C4'" . DC A 1 6 ? 19.142 16.334 19.845 1.00 30.17 ? 6 DC A "C4'" 1
ATOM 136 O "O4'" . DC A 1 6 ? 17.968 15.576 19.494 1.00 28.53 ? 6 DC A "O4'" 1
ATOM 137 C "C3'" . DC A 1 6 ? 19.153 17.497 18.872 1.00 30.08 ? 6 DC A "C3'" 1
ATOM 138 O "O3'" . DC A 1 6 ? 19.784 17.140 17.695 1.00 28.84 ? 6 DC A "O3'" 1
ATOM 139 C "C2'" . DC A 1 6 ? 17.664 17.696 18.646 1.00 28.05 ? 6 DC A "C2'" 1
ATOM 140 C "C1'" . DC A 1 6 ? 17.220 16.251 18.538 1.00 26.45 ? 6 DC A "C1'" 1
ATOM 141 N N1 . DC A 1 6 ? 15.764 15.989 18.707 1.00 22.25 ? 6 DC A N1 1
ATOM 142 C C2 . DC A 1 6 ? 15.236 14.967 17.977 1.00 19.62 ? 6 DC A C2 1
ATOM 143 O O2 . DC A 1 6 ? 15.965 14.266 17.288 1.00 25.02 ? 6 DC A O2 1
ATOM 144 N N3 . DC A 1 6 ? 13.940 14.700 18.043 1.00 18.76 ? 6 DC A N3 1
ATOM 145 C C4 . DC A 1 6 ? 13.128 15.414 18.822 1.00 23.93 ? 6 DC A C4 1
ATOM 146 N N4 . DC A 1 6 ? 11.834 15.015 18.842 1.00 20.83 ? 6 DC A N4 1
ATOM 147 C C5 . DC A 1 6 ? 13.627 16.532 19.599 1.00 23.23 ? 6 DC A C5 1
ATOM 148 C C6 . DC A 1 6 ? 14.948 16.768 19.500 1.00 24.39 ? 6 DC A C6 1
ATOM 149 P P . DG A 1 7 ? 21.272 17.571 17.443 1.00 29.90 ? 7 DG A P 1
ATOM 150 O OP1 . DG A 1 7 ? 22.020 17.152 18.633 1.00 32.31 ? 7 DG A OP1 1
ATOM 151 O OP2 . DG A 1 7 ? 21.218 18.985 16.991 1.00 31.75 ? 7 DG A OP2 1
ATOM 152 O "O5'" . DG A 1 7 ? 21.704 16.640 16.221 1.00 22.49 ? 7 DG A "O5'" 1
ATOM 153 C "C5'" . DG A 1 7 ? 21.917 15.284 16.358 1.00 22.24 ? 7 DG A "C5'" 1
ATOM 154 C "C4'" . DG A 1 7 ? 21.671 14.527 15.063 1.00 21.63 ? 7 DG A "C4'" 1
ATOM 155 O "O4'" . DG A 1 7 ? 20.240 14.352 14.862 1.00 23.57 ? 7 DG A "O4'" 1
ATOM 156 C "C3'" . DG A 1 7 ? 22.152 15.176 13.769 1.00 23.00 ? 7 DG A "C3'" 1
ATOM 157 O "O3'" . DG A 1 7 ? 22.566 14.147 12.937 1.00 24.98 ? 7 DG A "O3'" 1
ATOM 158 C "C2'" . DG A 1 7 ? 20.933 15.946 13.224 1.00 24.17 ? 7 DG A "C2'" 1
ATOM 159 C "C1'" . DG A 1 7 ? 19.767 15.138 13.753 1.00 23.46 ? 7 DG A "C1'" 1
ATOM 160 N N9 . DG A 1 7 ? 18.602 15.863 14.233 1.00 21.12 ? 7 DG A N9 1
ATOM 161 C C8 . DG A 1 7 ? 18.501 17.055 14.894 1.00 22.78 ? 7 DG A C8 1
ATOM 162 N N7 . DG A 1 7 ? 17.263 17.370 15.261 1.00 21.73 ? 7 DG A N7 1
ATOM 163 C C5 . DG A 1 7 ? 16.499 16.305 14.797 1.00 19.96 ? 7 DG A C5 1
ATOM 164 C C6 . DG A 1 7 ? 15.111 16.076 14.829 1.00 21.26 ? 7 DG A C6 1
ATOM 165 O O6 . DG A 1 7 ? 14.179 16.782 15.328 1.00 25.04 ? 7 DG A O6 1
ATOM 166 N N1 . DG A 1 7 ? 14.796 14.844 14.238 1.00 15.82 ? 7 DG A N1 1
ATOM 167 C C2 . DG A 1 7 ? 15.652 13.980 13.646 1.00 15.04 ? 7 DG A C2 1
ATOM 168 N N2 . DG A 1 7 ? 15.155 12.867 13.114 1.00 12.24 ? 7 DG A N2 1
ATOM 169 N N3 . DG A 1 7 ? 16.933 14.191 13.577 1.00 18.79 ? 7 DG A N3 1
ATOM 170 C C4 . DG A 1 7 ? 17.299 15.369 14.183 1.00 21.47 ? 7 DG A C4 1
ATOM 171 P P . DC A 1 8 ? 23.000 14.399 11.441 1.00 25.13 ? 8 DC A P 1
ATOM 172 O OP1 . DC A 1 8 ? 23.730 13.231 10.924 1.00 26.11 ? 8 DC A OP1 1
ATOM 173 O OP2 . DC A 1 8 ? 23.515 15.777 11.631 1.00 23.40 ? 8 DC A OP2 1
ATOM 174 O "O5'" . DC A 1 8 ? 21.697 14.262 10.579 1.00 23.26 ? 8 DC A "O5'" 1
ATOM 175 C "C5'" . DC A 1 8 ? 21.407 13.019 9.995 1.00 24.99 ? 8 DC A "C5'" 1
ATOM 176 C "C4'" . DC A 1 8 ? 20.003 13.042 9.424 1.00 25.44 ? 8 DC A "C4'" 1
ATOM 177 O "O4'" . DC A 1 8 ? 19.227 13.900 10.271 1.00 26.51 ? 8 DC A "O4'" 1
ATOM 178 C "C3'" . DC A 1 8 ? 19.817 13.736 8.113 1.00 25.60 ? 8 DC A "C3'" 1
ATOM 179 O "O3'" . DC A 1 8 ? 20.054 12.892 7.066 1.00 26.86 ? 8 DC A "O3'" 1
ATOM 180 C "C2'" . DC A 1 8 ? 18.352 14.121 8.158 1.00 27.66 ? 8 DC A "C2'" 1
ATOM 181 C "C1'" . DC A 1 8 ? 17.993 14.064 9.629 1.00 25.87 ? 8 DC A "C1'" 1
ATOM 182 N N1 . DC A 1 8 ? 17.378 15.218 10.261 1.00 22.83 ? 8 DC A N1 1
ATOM 183 C C2 . DC A 1 8 ? 16.012 15.277 10.451 1.00 25.50 ? 8 DC A C2 1
ATOM 184 O O2 . DC A 1 8 ? 15.290 14.376 10.045 1.00 27.09 ? 8 DC A O2 1
ATOM 185 N N3 . DC A 1 8 ? 15.493 16.338 11.074 1.00 26.58 ? 8 DC A N3 1
ATOM 186 C C4 . DC A 1 8 ? 16.277 17.301 11.528 1.00 26.99 ? 8 DC A C4 1
ATOM 187 N N4 . DC A 1 8 ? 15.709 18.329 12.131 1.00 28.38 ? 8 DC A N4 1
ATOM 188 C C5 . DC A 1 8 ? 17.670 17.258 11.387 1.00 26.65 ? 8 DC A C5 1
ATOM 189 C C6 . DC A 1 8 ? 18.170 16.190 10.754 1.00 25.96 ? 8 DC A C6 1
ATOM 190 O "O5'" . DG B 1 1 ? 35.264 4.676 -10.958 1.00 36.80 ? 1 DG B "O5'" 1
ATOM 191 C "C5'" . DG B 1 1 ? 35.616 4.326 -9.649 1.00 35.23 ? 1 DG B "C5'" 1
ATOM 192 C "C4'" . DG B 1 1 ? 35.225 5.438 -8.725 1.00 33.00 ? 1 DG B "C4'" 1
ATOM 193 O "O4'" . DG B 1 1 ? 33.787 5.555 -8.839 1.00 32.07 ? 1 DG B "O4'" 1
ATOM 194 C "C3'" . DG B 1 1 ? 35.481 5.144 -7.265 1.00 33.47 ? 1 DG B "C3'" 1
ATOM 195 O "O3'" . DG B 1 1 ? 35.692 6.388 -6.612 1.00 36.48 ? 1 DG B "O3'" 1
ATOM 196 C "C2'" . DG B 1 1 ? 34.201 4.375 -6.875 1.00 30.75 ? 1 DG B "C2'" 1
ATOM 197 C "C1'" . DG B 1 1 ? 33.138 5.111 -7.673 1.00 27.89 ? 1 DG B "C1'" 1
ATOM 198 N N9 . DG B 1 1 ? 32.008 4.395 -8.216 1.00 21.67 ? 1 DG B N9 1
ATOM 199 C C8 . DG B 1 1 ? 32.002 3.243 -8.965 1.00 21.83 ? 1 DG B C8 1
ATOM 200 N N7 . DG B 1 1 ? 30.806 2.844 -9.346 1.00 19.13 ? 1 DG B N7 1
ATOM 201 C C5 . DG B 1 1 ? 29.964 3.850 -8.831 1.00 16.64 ? 1 DG B C5 1
ATOM 202 C C6 . DG B 1 1 ? 28.570 4.010 -8.907 1.00 16.68 ? 1 DG B C6 1
ATOM 203 O O6 . DG B 1 1 ? 27.702 3.290 -9.480 1.00 22.48 ? 1 DG B O6 1
ATOM 204 N N1 . DG B 1 1 ? 28.140 5.159 -8.276 1.00 12.17 ? 1 DG B N1 1
ATOM 205 C C2 . DG B 1 1 ? 28.922 6.049 -7.614 1.00 14.94 ? 1 DG B C2 1
ATOM 206 N N2 . DG B 1 1 ? 28.294 7.107 -7.042 1.00 11.54 ? 1 DG B N2 1
ATOM 207 N N3 . DG B 1 1 ? 30.232 5.903 -7.508 1.00 15.38 ? 1 DG B N3 1
ATOM 208 C C4 . DG B 1 1 ? 30.679 4.792 -8.138 1.00 18.24 ? 1 DG B C4 1
HETATM 209 BR BR . CBR B 1 2 ? 31.905 2.093 -5.331 1.00 46.90 ? 2 CBR B BR 1
HETATM 210 P P . CBR B 1 2 ? 35.845 6.399 -5.028 1.00 42.44 ? 2 CBR B P 1
HETATM 211 O OP1 . CBR B 1 2 ? 36.751 7.516 -4.674 1.00 42.97 ? 2 CBR B OP1 1
HETATM 212 O OP2 . CBR B 1 2 ? 36.145 4.997 -4.679 1.00 44.09 ? 2 CBR B OP2 1
HETATM 213 O "O5'" . CBR B 1 2 ? 34.404 6.708 -4.432 1.00 41.23 ? 2 CBR B "O5'" 1
HETATM 214 N N1 . CBR B 1 2 ? 30.316 5.446 -3.978 1.00 37.88 ? 2 CBR B N1 1
HETATM 215 C C6 . CBR B 1 2 ? 31.147 4.445 -4.334 1.00 36.87 ? 2 CBR B C6 1
HETATM 216 C C2 . CBR B 1 2 ? 28.956 5.404 -4.298 1.00 34.53 ? 2 CBR B C2 1
HETATM 217 O O2 . CBR B 1 2 ? 28.209 6.338 -3.963 1.00 34.78 ? 2 CBR B O2 1
HETATM 218 N N3 . CBR B 1 2 ? 28.489 4.307 -4.921 1.00 29.77 ? 2 CBR B N3 1
HETATM 219 C C4 . CBR B 1 2 ? 29.309 3.320 -5.251 1.00 31.70 ? 2 CBR B C4 1
HETATM 220 N N4 . CBR B 1 2 ? 28.770 2.279 -5.904 1.00 29.62 ? 2 CBR B N4 1
HETATM 221 C C5 . CBR B 1 2 ? 30.690 3.377 -4.941 1.00 34.78 ? 2 CBR B C5 1
HETATM 222 C "C2'" . CBR B 1 2 ? 32.028 6.472 -2.309 1.00 44.87 ? 2 CBR B "C2'" 1
HETATM 223 C "C5'" . CBR B 1 2 ? 33.867 7.992 -4.687 1.00 44.55 ? 2 CBR B "C5'" 1
HETATM 224 C "C4'" . CBR B 1 2 ? 32.586 8.193 -3.913 1.00 44.69 ? 2 CBR B "C4'" 1
HETATM 225 O "O4'" . CBR B 1 2 ? 31.562 7.310 -4.417 1.00 45.36 ? 2 CBR B "O4'" 1
HETATM 226 C "C1'" . CBR B 1 2 ? 30.916 6.634 -3.334 1.00 43.28 ? 2 CBR B "C1'" 1
HETATM 227 C "C3'" . CBR B 1 2 ? 32.745 7.830 -2.446 1.00 45.09 ? 2 CBR B "C3'" 1
HETATM 228 O "O3'" . CBR B 1 2 ? 32.227 8.869 -1.654 1.00 46.59 ? 2 CBR B "O3'" 1
ATOM 229 P P . DG B 1 3 ? 32.438 8.710 -0.078 1.00 52.20 ? 3 DG B P 1
ATOM 230 O OP1 . DG B 1 3 ? 32.639 10.044 0.558 1.00 48.76 ? 3 DG B OP1 1
ATOM 231 O OP2 . DG B 1 3 ? 33.337 7.536 0.186 1.00 48.03 ? 3 DG B OP2 1
ATOM 232 O "O5'" . DG B 1 3 ? 30.910 8.316 0.229 1.00 51.61 ? 3 DG B "O5'" 1
ATOM 233 C "C5'" . DG B 1 3 ? 29.771 9.172 -0.085 1.00 48.64 ? 3 DG B "C5'" 1
ATOM 234 C "C4'" . DG B 1 3 ? 28.519 8.500 0.462 1.00 44.75 ? 3 DG B "C4'" 1
ATOM 235 O "O4'" . DG B 1 3 ? 28.199 7.272 -0.263 1.00 41.82 ? 3 DG B "O4'" 1
ATOM 236 C "C3'" . DG B 1 3 ? 28.692 8.032 1.892 1.00 43.45 ? 3 DG B "C3'" 1
ATOM 237 O "O3'" . DG B 1 3 ? 27.464 8.124 2.522 1.00 48.22 ? 3 DG B "O3'" 1
ATOM 238 C "C2'" . DG B 1 3 ? 29.133 6.579 1.718 1.00 38.95 ? 3 DG B "C2'" 1
ATOM 239 C "C1'" . DG B 1 3 ? 28.247 6.120 0.574 1.00 33.30 ? 3 DG B "C1'" 1
ATOM 240 N N9 . DG B 1 3 ? 28.665 4.936 -0.204 1.00 23.51 ? 3 DG B N9 1
ATOM 241 C C8 . DG B 1 3 ? 29.927 4.387 -0.402 1.00 20.43 ? 3 DG B C8 1
ATOM 242 N N7 . DG B 1 3 ? 29.947 3.304 -1.169 1.00 17.47 ? 3 DG B N7 1
ATOM 243 C C5 . DG B 1 3 ? 28.587 3.136 -1.499 1.00 14.32 ? 3 DG B C5 1
ATOM 244 C C6 . DG B 1 3 ? 27.960 2.188 -2.272 1.00 13.00 ? 3 DG B C6 1
ATOM 245 O O6 . DG B 1 3 ? 28.460 1.242 -2.889 1.00 19.32 ? 3 DG B O6 1
ATOM 246 N N1 . DG B 1 3 ? 26.601 2.349 -2.359 1.00 14.02 ? 3 DG B N1 1
ATOM 247 C C2 . DG B 1 3 ? 25.887 3.317 -1.754 1.00 17.27 ? 3 DG B C2 1
ATOM 248 N N2 . DG B 1 3 ? 24.549 3.303 -1.969 1.00 18.52 ? 3 DG B N2 1
ATOM 249 N N3 . DG B 1 3 ? 26.449 4.252 -1.008 1.00 19.08 ? 3 DG B N3 1
ATOM 250 C C4 . DG B 1 3 ? 27.801 4.103 -0.923 1.00 18.36 ? 3 DG B C4 1
ATOM 251 P P A DA B 1 4 ? 27.324 8.800 3.967 0.50 50.05 ? 4 DA B P 1
ATOM 252 P P B DA B 1 4 ? 26.951 9.520 3.145 0.50 51.36 ? 4 DA B P 1
ATOM 253 O OP1 A DA B 1 4 ? 27.091 10.253 3.759 0.50 50.11 ? 4 DA B OP1 1
ATOM 254 O OP1 B DA B 1 4 ? 26.476 10.426 2.070 0.50 51.64 ? 4 DA B OP1 1
ATOM 255 O OP2 A DA B 1 4 ? 28.437 8.296 4.812 0.50 47.63 ? 4 DA B OP2 1
ATOM 256 O OP2 B DA B 1 4 ? 28.016 9.951 4.092 0.50 50.69 ? 4 DA B OP2 1
ATOM 257 O "O5'" A DA B 1 4 ? 25.916 8.206 4.474 0.50 49.20 ? 4 DA B "O5'" 1
ATOM 258 O "O5'" B DA B 1 4 ? 25.644 9.072 3.960 0.50 50.35 ? 4 DA B "O5'" 1
ATOM 259 C "C5'" A DA B 1 4 ? 24.804 7.959 3.599 0.50 47.60 ? 4 DA B "C5'" 1
ATOM 260 C "C5'" B DA B 1 4 ? 25.861 8.366 5.185 0.50 49.62 ? 4 DA B "C5'" 1
ATOM 261 C "C4'" A DA B 1 4 ? 24.189 6.598 3.891 0.50 46.86 ? 4 DA B "C4'" 1
ATOM 262 C "C4'" B DA B 1 4 ? 24.913 7.198 5.373 0.50 48.16 ? 4 DA B "C4'" 1
ATOM 263 O "O4'" A DA B 1 4 ? 24.682 5.551 3.017 0.50 45.84 ? 4 DA B "O4'" 1
ATOM 264 O "O4'" B DA B 1 4 ? 24.703 6.529 4.100 0.50 46.31 ? 4 DA B "O4'" 1
ATOM 265 C "C3'" A DA B 1 4 ? 24.484 6.024 5.262 0.50 46.54 ? 4 DA B "C3'" 1
ATOM 266 C "C3'" B DA B 1 4 ? 25.452 6.155 6.358 0.50 47.75 ? 4 DA B "C3'" 1
ATOM 267 O "O3'" A DA B 1 4 ? 23.652 6.655 6.233 0.50 47.89 ? 4 DA B "O3'" 1
ATOM 268 O "O3'" B DA B 1 4 ? 24.501 5.815 7.371 0.50 47.45 ? 4 DA B "O3'" 1
ATOM 269 C "C2'" A DA B 1 4 ? 24.188 4.537 5.053 0.50 46.03 ? 4 DA B "C2'" 1
ATOM 270 C "C2'" B DA B 1 4 ? 25.758 4.961 5.459 0.50 48.06 ? 4 DA B "C2'" 1
ATOM 271 C "C1'" A DA B 1 4 ? 24.173 4.337 3.521 0.50 44.31 ? 4 DA B "C1'" 1
ATOM 272 C "C1'" B DA B 1 4 ? 24.703 5.128 4.365 0.50 46.24 ? 4 DA B "C1'" 1
ATOM 273 N N9 A DA B 1 4 ? 24.722 3.444 2.693 0.50 35.60 ? 4 DA B N9 1
ATOM 274 N N9 B DA B 1 4 ? 24.562 4.147 3.404 0.50 36.26 ? 4 DA B N9 1
ATOM 275 C C8 A DA B 1 4 ? 24.158 2.506 1.850 0.50 32.58 ? 4 DA B C8 1
ATOM 276 C C8 B DA B 1 4 ? 23.356 3.817 2.827 0.50 33.53 ? 4 DA B C8 1
ATOM 277 N N7 A DA B 1 4 ? 25.049 1.725 1.262 0.50 35.85 ? 4 DA B N7 1
ATOM 278 N N7 B DA B 1 4 ? 23.442 2.901 1.895 0.50 33.29 ? 4 DA B N7 1
ATOM 279 C C5 A DA B 1 4 ? 26.267 2.187 1.756 0.50 33.59 ? 4 DA B C5 1
ATOM 280 C C5 B DA B 1 4 ? 24.801 2.597 1.843 0.50 26.84 ? 4 DA B C5 1
ATOM 281 C C6 A DA B 1 4 ? 27.590 1.783 1.520 0.50 32.30 ? 4 DA B C6 1
ATOM 282 C C6 B DA B 1 4 ? 25.539 1.672 1.048 0.50 26.93 ? 4 DA B C6 1
ATOM 283 N N6 A DA B 1 4 ? 27.912 0.790 0.688 0.50 39.71 ? 4 DA B N6 1
ATOM 284 N N6 B DA B 1 4 ? 24.987 0.871 0.121 0.50 35.88 ? 4 DA B N6 1
ATOM 285 N N1 A DA B 1 4 ? 28.575 2.450 2.167 0.50 32.67 ? 4 DA B N1 1
ATOM 286 N N1 B DA B 1 4 ? 26.877 1.592 1.241 0.50 22.16 ? 4 DA B N1 1
ATOM 287 C C2 A DA B 1 4 ? 28.241 3.451 3.008 0.50 31.83 ? 4 DA B C2 1
ATOM 288 C C2 B DA B 1 4 ? 27.435 2.404 2.171 0.50 26.26 ? 4 DA B C2 1
ATOM 289 N N3 A DA B 1 4 ? 27.033 3.925 3.313 0.50 26.51 ? 4 DA B N3 1
ATOM 290 N N3 B DA B 1 4 ? 26.853 3.316 2.987 0.50 25.57 ? 4 DA B N3 1
ATOM 291 C C4 A DA B 1 4 ? 26.085 3.246 2.645 0.50 32.69 ? 4 DA B C4 1
ATOM 292 C C4 B DA B 1 4 ? 25.517 3.366 2.771 0.50 30.26 ? 4 DA B C4 1
ATOM 293 P P A DA B 1 5 ? 24.144 6.870 7.748 0.50 47.65 ? 5 DA B P 1
ATOM 294 P P B DA B 1 5 ? 24.281 6.615 8.761 0.50 46.52 ? 5 DA B P 1
ATOM 295 O OP1 A DA B 1 5 ? 23.994 8.297 8.121 0.50 44.71 ? 5 DA B OP1 1
ATOM 296 O OP1 B DA B 1 5 ? 24.008 8.044 8.465 0.50 44.00 ? 5 DA B OP1 1
ATOM 297 O OP2 A DA B 1 5 ? 25.475 6.220 7.781 0.50 49.10 ? 5 DA B OP2 1
ATOM 298 O OP2 B DA B 1 5 ? 25.311 6.235 9.763 0.50 47.37 ? 5 DA B OP2 1
ATOM 299 O "O5'" A DA B 1 5 ? 23.130 5.972 8.611 0.50 44.71 ? 5 DA B "O5'" 1
ATOM 300 O "O5'" B DA B 1 5 ? 22.959 5.851 9.183 0.50 44.16 ? 5 DA B "O5'" 1
ATOM 301 C "C5'" A DA B 1 5 ? 21.955 6.526 9.164 0.50 42.06 ? 5 DA B "C5'" 1
ATOM 302 C "C5'" B DA B 1 5 ? 21.819 6.602 9.294 0.50 42.03 ? 5 DA B "C5'" 1
ATOM 303 C "C4'" . DA B 1 5 ? 20.715 6.156 8.373 1.00 40.23 ? 5 DA B "C4'" 1
ATOM 304 O "O4'" . DA B 1 5 ? 19.530 6.500 9.101 1.00 36.07 ? 5 DA B "O4'" 1
ATOM 305 C "C3'" . DA B 1 5 ? 20.546 6.942 7.088 1.00 38.86 ? 5 DA B "C3'" 1
ATOM 306 O "O3'" . DA B 1 5 ? 19.520 6.390 6.325 1.00 43.53 ? 5 DA B "O3'" 1
ATOM 307 C "C2'" . DA B 1 5 ? 20.083 8.280 7.593 1.00 36.07 ? 5 DA B "C2'" 1
ATOM 308 C "C1'" . DA B 1 5 ? 19.262 7.891 8.839 1.00 33.24 ? 5 DA B "C1'" 1
ATOM 309 N N9 . DA B 1 5 ? 19.493 8.828 9.966 1.00 23.45 ? 5 DA B N9 1
ATOM 310 C C8 . DA B 1 5 ? 20.650 9.132 10.643 1.00 21.24 ? 5 DA B C8 1
ATOM 311 N N7 . DA B 1 5 ? 20.502 10.027 11.596 1.00 20.53 ? 5 DA B N7 1
ATOM 312 C C5 . DA B 1 5 ? 19.159 10.387 11.495 1.00 20.90 ? 5 DA B C5 1
ATOM 313 C C6 . DA B 1 5 ? 18.355 11.317 12.191 1.00 22.18 ? 5 DA B C6 1
ATOM 314 N N6 . DA B 1 5 ? 18.810 12.091 13.163 1.00 23.29 ? 5 DA B N6 1
ATOM 315 N N1 . DA B 1 5 ? 17.036 11.422 11.889 1.00 24.21 ? 5 DA B N1 1
ATOM 316 C C2 . DA B 1 5 ? 16.560 10.642 10.891 1.00 23.34 ? 5 DA B C2 1
ATOM 317 N N3 . DA B 1 5 ? 17.230 9.749 10.147 1.00 22.02 ? 5 DA B N3 1
ATOM 318 C C4 . DA B 1 5 ? 18.529 9.648 10.510 1.00 20.55 ? 5 DA B C4 1
ATOM 319 P P . DC B 1 6 ? 19.774 5.964 4.796 1.00 48.90 ? 6 DC B P 1
ATOM 320 O OP1 . DC B 1 6 ? 20.595 7.046 4.158 1.00 48.30 ? 6 DC B OP1 1
ATOM 321 O OP2 . DC B 1 6 ? 18.456 5.494 4.254 1.00 46.10 ? 6 DC B OP2 1
ATOM 322 O "O5'" . DC B 1 6 ? 20.757 4.709 4.972 1.00 47.73 ? 6 DC B "O5'" 1
ATOM 323 C "C5'" . DC B 1 6 ? 20.387 3.539 5.671 1.00 47.23 ? 6 DC B "C5'" 1
ATOM 324 C "C4'" . DC B 1 6 ? 19.963 2.453 4.703 1.00 45.65 ? 6 DC B "C4'" 1
ATOM 325 O "O4'" . DC B 1 6 ? 21.071 1.961 3.941 1.00 44.64 ? 6 DC B "O4'" 1
ATOM 326 C "C3'" . DC B 1 6 ? 19.458 1.240 5.419 1.00 46.43 ? 6 DC B "C3'" 1
ATOM 327 O "O3'" . DC B 1 6 ? 18.544 0.534 4.623 1.00 51.14 ? 6 DC B "O3'" 1
ATOM 328 C "C2'" . DC B 1 6 ? 20.698 0.421 5.626 1.00 44.82 ? 6 DC B "C2'" 1
ATOM 329 C "C1'" . DC B 1 6 ? 21.441 0.643 4.327 1.00 42.34 ? 6 DC B "C1'" 1
ATOM 330 N N1 . DC B 1 6 ? 22.963 0.534 4.445 1.00 38.32 ? 6 DC B N1 1
ATOM 331 C C2 . DC B 1 6 ? 23.724 -0.388 3.713 1.00 34.49 ? 6 DC B C2 1
ATOM 332 O O2 . DC B 1 6 ? 23.185 -1.156 2.925 1.00 33.75 ? 6 DC B O2 1
ATOM 333 N N3 . DC B 1 6 ? 25.072 -0.412 3.887 1.00 32.87 ? 6 DC B N3 1
ATOM 334 C C4 . DC B 1 6 ? 25.695 0.422 4.729 1.00 32.34 ? 6 DC B C4 1
ATOM 335 N N4 . DC B 1 6 ? 27.043 0.382 4.846 1.00 29.32 ? 6 DC B N4 1
ATOM 336 C C5 . DC B 1 6 ? 24.944 1.366 5.474 1.00 33.75 ? 6 DC B C5 1
ATOM 337 C C6 . DC B 1 6 ? 23.613 1.391 5.297 1.00 36.81 ? 6 DC B C6 1
ATOM 338 P P . DG B 1 7 ? 17.479 -0.302 5.469 1.00 55.46 ? 7 DG B P 1
ATOM 339 O OP1 . DG B 1 7 ? 16.209 -0.357 4.692 1.00 54.25 ? 7 DG B OP1 1
ATOM 340 O OP2 . DG B 1 7 ? 17.601 0.208 6.875 1.00 53.67 ? 7 DG B OP2 1
ATOM 341 O "O5'" . DG B 1 7 ? 18.125 -1.755 5.490 1.00 49.31 ? 7 DG B "O5'" 1
ATOM 342 C "C5'" . DG B 1 7 ? 18.030 -2.488 4.324 1.00 46.46 ? 7 DG B "C5'" 1
ATOM 343 C "C4'" . DG B 1 7 ? 18.703 -3.800 4.553 1.00 42.95 ? 7 DG B "C4'" 1
ATOM 344 O "O4'" . DG B 1 7 ? 20.109 -3.523 4.635 1.00 41.01 ? 7 DG B "O4'" 1
ATOM 345 C "C3'" . DG B 1 7 ? 18.293 -4.461 5.854 1.00 41.53 ? 7 DG B "C3'" 1
ATOM 346 O "O3'" . DG B 1 7 ? 18.094 -5.784 5.525 1.00 43.50 ? 7 DG B "O3'" 1
ATOM 347 C "C2'" . DG B 1 7 ? 19.470 -4.190 6.776 1.00 39.46 ? 7 DG B "C2'" 1
ATOM 348 C "C1'" . DG B 1 7 ? 20.634 -4.120 5.791 1.00 36.24 ? 7 DG B "C1'" 1
ATOM 349 N N9 . DG B 1 7 ? 21.814 -3.374 6.217 1.00 28.63 ? 7 DG B N9 1
ATOM 350 C C8 . DG B 1 7 ? 21.860 -2.303 7.060 1.00 24.20 ? 7 DG B C8 1
ATOM 351 N N7 . DG B 1 7 ? 23.073 -1.862 7.235 1.00 23.66 ? 7 DG B N7 1
ATOM 352 C C5 . DG B 1 7 ? 23.887 -2.695 6.471 1.00 23.77 ? 7 DG B C5 1
ATOM 353 C C6 . DG B 1 7 ? 25.306 -2.711 6.298 1.00 23.45 ? 7 DG B C6 1
ATOM 354 O O6 . DG B 1 7 ? 26.224 -1.977 6.790 1.00 20.61 ? 7 DG B O6 1
ATOM 355 N N1 . DG B 1 7 ? 25.674 -3.769 5.435 1.00 23.53 ? 7 DG B N1 1
ATOM 356 C C2 . DG B 1 7 ? 24.836 -4.664 4.840 1.00 23.31 ? 7 DG B C2 1
ATOM 357 N N2 . DG B 1 7 ? 25.465 -5.549 4.068 1.00 22.13 ? 7 DG B N2 1
ATOM 358 N N3 . DG B 1 7 ? 23.510 -4.656 4.996 1.00 24.88 ? 7 DG B N3 1
ATOM 359 C C4 . DG B 1 7 ? 23.115 -3.647 5.834 1.00 25.31 ? 7 DG B C4 1
ATOM 360 P P . DC B 1 8 ? 17.554 -6.826 6.582 1.00 49.09 ? 8 DC B P 1
ATOM 361 O OP1 . DC B 1 8 ? 16.802 -7.812 5.768 1.00 49.88 ? 8 DC B OP1 1
ATOM 362 O OP2 . DC B 1 8 ? 17.102 -6.129 7.812 1.00 48.58 ? 8 DC B OP2 1
ATOM 363 O "O5'" . DC B 1 8 ? 18.860 -7.662 6.918 1.00 49.45 ? 8 DC B "O5'" 1
ATOM 364 C "C5'" . DC B 1 8 ? 19.542 -8.268 5.777 1.00 46.94 ? 8 DC B "C5'" 1
ATOM 365 C "C4'" . DC B 1 8 ? 20.986 -8.580 6.129 1.00 44.57 ? 8 DC B "C4'" 1
ATOM 366 O "O4'" . DC B 1 8 ? 21.730 -7.392 6.474 1.00 38.93 ? 8 DC B "O4'" 1
ATOM 367 C "C3'" . DC B 1 8 ? 21.079 -9.467 7.365 1.00 43.87 ? 8 DC B "C3'" 1
ATOM 368 O "O3'" . DC B 1 8 ? 21.053 -10.847 6.967 1.00 45.99 ? 8 DC B "O3'" 1
ATOM 369 C "C2'" . DC B 1 8 ? 22.384 -9.015 8.021 1.00 41.96 ? 8 DC B "C2'" 1
ATOM 370 C "C1'" . DC B 1 8 ? 22.868 -7.878 7.124 1.00 37.28 ? 8 DC B "C1'" 1
ATOM 371 N N1 . DC B 1 8 ? 23.475 -6.781 7.850 1.00 30.68 ? 8 DC B N1 1
ATOM 372 C C2 . DC B 1 8 ? 24.847 -6.541 7.757 1.00 28.87 ? 8 DC B C2 1
ATOM 373 O O2 . DC B 1 8 ? 25.581 -7.253 7.055 1.00 27.07 ? 8 DC B O2 1
ATOM 374 N N3 . DC B 1 8 ? 25.343 -5.491 8.454 1.00 27.38 ? 8 DC B N3 1
ATOM 375 C C4 . DC B 1 8 ? 24.565 -4.713 9.203 1.00 25.53 ? 8 DC B C4 1
ATOM 376 N N4 . DC B 1 8 ? 25.113 -3.685 9.856 1.00 23.54 ? 8 DC B N4 1
ATOM 377 C C5 . DC B 1 8 ? 23.186 -4.966 9.312 1.00 27.05 ? 8 DC B C5 1
ATOM 378 C C6 . DC B 1 8 ? 22.690 -5.999 8.618 1.00 29.24 ? 8 DC B C6 1
HETATM 379 O O . HOH C 2 . ? 14.976 12.644 8.378 1.00 24.75 ? 9 HOH A O 1
HETATM 380 O O . HOH C 2 . ? 20.266 13.419 20.697 1.00 28.75 ? 10 HOH A O 1
HETATM 381 O O . HOH C 2 . ? 26.572 12.970 8.094 1.00 48.97 ? 11 HOH A O 1
HETATM 382 O O . HOH D 2 . ? 31.092 -0.635 -3.344 1.00 43.67 ? 9 HOH B O 1
HETATM 383 O O . HOH D 2 . ? 15.035 -4.402 16.100 1.00 28.93 ? 10 HOH B O 1
#