data_2DZ7
#
_entry.id 2DZ7
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.380
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2DZ7 pdb_00002dz7 10.2210/pdb2dz7/pdb
NDB BD0098 ? ?
RCSB RCSB026025 ? ?
WWPDB D_1000026025 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2DZ7
_pdbx_database_status.recvd_initial_deposition_date 2006-09-21
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Sato, Y.' 1 ?
'Mitomi, K.' 2 ?
'Sumani, T.' 3 ?
'Kondo, J.' 4 ?
'Takenaka, A.' 5 ?
#
_citation.id primary
_citation.title
'DNA octaplex formation with an I-motif of water-mediated A-quartets: reinterpretation of the crystal structure of d(GCGAAAGC)'
_citation.journal_abbrev 'J.Biochem.(Tokyo)'
_citation.journal_volume 140
_citation.page_first 759
_citation.page_last 762
_citation.year 2006
_citation.journal_id_ASTM JOBIAO
_citation.country JA
_citation.journal_id_ISSN 0021-924X
_citation.journal_id_CSD 0418
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 17062599
_citation.pdbx_database_id_DOI 10.1093/jb/mvj213
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Sato, Y.' 1 ?
primary 'Mitomi, K.' 2 ?
primary 'Sunami, T.' 3 ?
primary 'Kondo, J.' 4 ?
primary 'Takenaka, A.' 5 ?
#
_cell.entry_id 2DZ7
_cell.length_a 36.909
_cell.length_b 36.909
_cell.length_c 64.337
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 16
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 2DZ7
_symmetry.space_group_name_H-M 'I 4 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 97
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*DGP*DCP*DGP*DAP*DAP*DAP*DGP*DC)-3')
;
2460.644 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ?
3 water nat water 18.015 72 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DA)(DA)(DA)(DG)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GCGAAAGC
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DC n
1 3 DG n
1 4 DA n
1 5 DA n
1 6 DA n
1 7 DG n
1 8 DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'chemically synthesized'
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 2DZ7
_struct_ref.pdbx_db_accession 2DZ7
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 2DZ7
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 8
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 2DZ7
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 8
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 8
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
#
_exptl.entry_id 2DZ7
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.12
_exptl_crystal.density_percent_sol 41.87
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 277
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.0
_exptl_crystal_grow.pdbx_details
;sodium chloride, magnesium chloride, spermine 4HCl, 2-methyl-2,4-pentanediol, sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
;
_exptl_crystal_grow.pdbx_pH_range .
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 'sodium chloride' ? ? ?
1 2 1 'magnesium chloride' ? ? ?
1 3 1 'spermine 4HCl' ? ? ?
1 4 1 2-methyl-2,4-pentanediol ? ? ?
1 5 1 'sodium cacodylate' ? ? ?
1 6 1 HOH ? ? ?
1 7 2 'sodium chloride' ? ? ?
1 8 2 'magnesium chloride' ? ? ?
1 9 2 'sodium cacodylate' ? ? ?
1 10 2 HOH ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 4'
_diffrn_detector.pdbx_collection_date 2001-10-21
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.0
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B'
_diffrn_source.pdbx_synchrotron_site 'Photon Factory'
_diffrn_source.pdbx_synchrotron_beamline BL-18B
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.0
#
_reflns.entry_id 2DZ7
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 60
_reflns.d_resolution_high 1.58
_reflns.number_obs 3359
_reflns.number_all ?
_reflns.percent_possible_obs 99.9
_reflns.pdbx_Rmerge_I_obs 0.063
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 15.3
_reflns.B_iso_Wilson_estimate 11.5
_reflns.pdbx_redundancy 10.7
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.58
_reflns_shell.d_res_low 1.64
_reflns_shell.percent_possible_all 99.4
_reflns_shell.Rmerge_I_obs 0.305
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 3.3
_reflns_shell.pdbx_redundancy 6.2
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 2DZ7
_refine.ls_number_reflns_obs 2764
_refine.ls_number_reflns_all 3359
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 3.0
_refine.pdbx_data_cutoff_high_absF 772275.75
_refine.pdbx_data_cutoff_low_absF 0.000000
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.00
_refine.ls_d_res_high 1.60
_refine.ls_percent_reflns_obs 88.0
_refine.ls_R_factor_obs 0.19
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.19
_refine.ls_R_factor_R_free 0.211
_refine.ls_R_factor_R_free_error 0.013
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 9.8
_refine.ls_number_reflns_R_free 270
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean 32.3
_refine.aniso_B[1][1] 3.65
_refine.aniso_B[2][2] 3.65
_refine.aniso_B[3][3] -7.30
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'FLAT MODEL'
_refine.solvent_model_param_ksol 0.455882
_refine.solvent_model_param_bsol 68.6892
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'The structure was refined also with Refmac5'
_refine.pdbx_starting_model '1UE3(PDB code)'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model RESTRAINED
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_phase_error ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 2DZ7
_refine_analyze.Luzzati_coordinate_error_obs 0.18
_refine_analyze.Luzzati_sigma_a_obs 0.10
_refine_analyze.Luzzati_d_res_low_obs 5.00
_refine_analyze.Luzzati_coordinate_error_free 0.22
_refine_analyze.Luzzati_sigma_a_free 0.15
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 164
_refine_hist.pdbx_number_atoms_ligand 2
_refine_hist.number_atoms_solvent 72
_refine_hist.number_atoms_total 238
_refine_hist.d_res_high 1.60
_refine_hist.d_res_low 8.00
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg 2.1 ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d 22.2 ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d 1.47 ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 6
_refine_ls_shell.d_res_high 1.60
_refine_ls_shell.d_res_low 1.70
_refine_ls_shell.number_reflns_R_work 304
_refine_ls_shell.R_factor_R_work 0.2
_refine_ls_shell.percent_reflns_obs 67.2
_refine_ls_shell.R_factor_R_free 0.282
_refine_ls_shell.R_factor_R_free_error 0.048
_refine_ls_shell.percent_reflns_R_free 10.1
_refine_ls_shell.number_reflns_R_free 34
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 dna-rna_rep.param ? 'X-RAY DIFFRACTION'
2 ion.param ? 'X-RAY DIFFRACTION'
3 water_rep.param ? 'X-RAY DIFFRACTION'
4 mg_o6.param ? 'X-RAY DIFFRACTION'
#
_struct.entry_id 2DZ7
_struct.title
'DNA Octaplex Formation with an I-Motif of A-Quartets: The Revised Crystal Structure of d(GCGAAAGC)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2DZ7
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'A-quartet, DNA octaplex, non-coding DNA, VNTR, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1001 A HOH 1002 1_555 ? ? ? ? ? ? ? 2.059 ? ?
metalc2 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1001 A HOH 1003 1_555 ? ? ? ? ? ? ? 2.060 ? ?
metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1001 A HOH 1004 1_555 ? ? ? ? ? ? ? 2.059 ? ?
metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1001 A HOH 1005 1_555 ? ? ? ? ? ? ? 2.060 ? ?
metalc5 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1001 A HOH 1006 1_555 ? ? ? ? ? ? ? 2.059 ? ?
metalc6 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1001 A HOH 1007 1_555 ? ? ? ? ? ? ? 2.059 ? ?
metalc7 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 2001 A HOH 2044 1_555 ? ? ? ? ? ? ? 2.117 ? ?
metalc8 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 2001 A HOH 2044 4_665 ? ? ? ? ? ? ? 2.117 ? ?
metalc9 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 2001 A HOH 2044 2_755 ? ? ? ? ? ? ? 2.117 ? ?
metalc10 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 2001 A HOH 2044 3_645 ? ? ? ? ? ? ? 2.117 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 2 A DG 7 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 2 A DG 7 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 2 A DG 7 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DA 6 N7 ? ? A DG 3 A DA 6 8_666 ? ? ? ? ? ? TYPE_11_PAIR ? ? ?
hydrog8 hydrog ? ? A DG 3 N3 ? ? ? 1_555 A DA 6 N6 ? ? A DG 3 A DA 6 8_666 ? ? ? ? ? ? TYPE_11_PAIR ? ? ?
hydrog9 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DG 3 N3 ? ? A DA 6 A DG 3 8_666 ? ? ? ? ? ? TYPE_11_PAIR ? ? ?
hydrog10 hydrog ? ? A DA 6 N7 ? ? ? 1_555 A DG 3 N2 ? ? A DA 6 A DG 3 8_666 ? ? ? ? ? ? TYPE_11_PAIR ? ? ?
hydrog11 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 7 A DC 2 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 7 A DC 2 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 7 A DC 2 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 8_666 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A MG 2001 ? 4 'BINDING SITE FOR RESIDUE MG A 2001'
AC2 Software A MG 1001 ? 6 'BINDING SITE FOR RESIDUE MG A 1001'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 4 HOH D . ? HOH A 2044 . ? 3_645 ?
2 AC1 4 HOH D . ? HOH A 2044 . ? 1_555 ?
3 AC1 4 HOH D . ? HOH A 2044 . ? 2_755 ?
4 AC1 4 HOH D . ? HOH A 2044 . ? 4_665 ?
5 AC2 6 HOH D . ? HOH A 1002 . ? 1_555 ?
6 AC2 6 HOH D . ? HOH A 1003 . ? 1_555 ?
7 AC2 6 HOH D . ? HOH A 1004 . ? 1_555 ?
8 AC2 6 HOH D . ? HOH A 1005 . ? 1_555 ?
9 AC2 6 HOH D . ? HOH A 1006 . ? 1_555 ?
10 AC2 6 HOH D . ? HOH A 1007 . ? 1_555 ?
#
_database_PDB_matrix.entry_id 2DZ7
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 2DZ7
_atom_sites.fract_transf_matrix[1][1] 0.027094
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.027094
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.015543
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MG
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 31.064 2.198 51.374 1.00 39.88 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? 31.662 1.723 50.135 1.00 26.44 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 30.666 0.813 49.445 1.00 23.94 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 29.464 1.535 49.071 1.00 25.91 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 31.138 0.225 48.141 1.00 23.15 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 30.377 -1.010 48.039 1.00 29.58 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 30.721 1.253 47.097 1.00 24.85 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 29.403 1.752 47.669 1.00 22.45 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 29.168 3.166 47.462 1.00 21.46 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 30.103 4.175 47.540 1.00 27.03 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 29.581 5.379 47.362 1.00 18.13 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 28.220 5.126 47.141 1.00 16.86 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 27.155 6.028 46.903 1.00 19.53 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 27.187 7.262 46.771 1.00 21.64 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 25.950 5.367 46.754 1.00 18.17 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 25.769 4.010 46.854 1.00 24.61 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 24.514 3.535 46.691 1.00 23.97 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 26.758 3.162 47.097 1.00 20.81 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 27.952 3.786 47.226 1.00 19.00 ? 1 DG A C4 1
ATOM 20 P P . DC A 1 2 ? 30.652 -2.051 46.851 1.00 28.89 ? 2 DC A P 1
ATOM 21 O OP1 . DC A 1 2 ? 30.333 -3.360 47.478 1.00 32.04 ? 2 DC A OP1 1
ATOM 22 O OP2 . DC A 1 2 ? 31.939 -1.803 46.199 1.00 27.21 ? 2 DC A OP2 1
ATOM 23 O "O5'" . DC A 1 2 ? 29.575 -1.745 45.727 1.00 25.20 ? 2 DC A "O5'" 1
ATOM 24 C "C5'" . DC A 1 2 ? 28.202 -1.999 45.977 1.00 18.17 ? 2 DC A "C5'" 1
ATOM 25 C "C4'" . DC A 1 2 ? 27.381 -1.467 44.837 1.00 18.24 ? 2 DC A "C4'" 1
ATOM 26 O "O4'" . DC A 1 2 ? 27.443 -0.009 44.889 1.00 20.59 ? 2 DC A "O4'" 1
ATOM 27 C "C3'" . DC A 1 2 ? 27.917 -1.813 43.451 1.00 19.11 ? 2 DC A "C3'" 1
ATOM 28 O "O3'" . DC A 1 2 ? 26.838 -2.367 42.703 1.00 25.14 ? 2 DC A "O3'" 1
ATOM 29 C "C2'" . DC A 1 2 ? 28.392 -0.479 42.853 1.00 20.86 ? 2 DC A "C2'" 1
ATOM 30 C "C1'" . DC A 1 2 ? 27.428 0.462 43.584 1.00 17.26 ? 2 DC A "C1'" 1
ATOM 31 N N1 . DC A 1 2 ? 27.885 1.855 43.677 1.00 19.47 ? 2 DC A N1 1
ATOM 32 C C2 . DC A 1 2 ? 26.878 2.844 43.647 1.00 22.20 ? 2 DC A C2 1
ATOM 33 O O2 . DC A 1 2 ? 25.702 2.500 43.553 1.00 19.41 ? 2 DC A O2 1
ATOM 34 N N3 . DC A 1 2 ? 27.263 4.123 43.736 1.00 18.20 ? 2 DC A N3 1
ATOM 35 C C4 . DC A 1 2 ? 28.545 4.438 43.849 1.00 17.79 ? 2 DC A C4 1
ATOM 36 N N4 . DC A 1 2 ? 28.863 5.739 43.921 1.00 16.21 ? 2 DC A N4 1
ATOM 37 C C5 . DC A 1 2 ? 29.578 3.452 43.895 1.00 19.24 ? 2 DC A C5 1
ATOM 38 C C6 . DC A 1 2 ? 29.211 2.164 43.815 1.00 19.63 ? 2 DC A C6 1
ATOM 39 P P . DG A 1 3 ? 27.050 -2.958 41.244 1.00 24.80 ? 3 DG A P 1
ATOM 40 O OP1 . DG A 1 3 ? 25.973 -3.970 41.190 1.00 27.13 ? 3 DG A OP1 1
ATOM 41 O OP2 . DG A 1 3 ? 28.488 -3.274 40.988 1.00 25.38 ? 3 DG A OP2 1
ATOM 42 O "O5'" . DG A 1 3 ? 26.675 -1.727 40.309 1.00 24.37 ? 3 DG A "O5'" 1
ATOM 43 C "C5'" . DG A 1 3 ? 25.359 -1.156 40.344 1.00 19.72 ? 3 DG A "C5'" 1
ATOM 44 C "C4'" . DG A 1 3 ? 25.355 0.183 39.650 1.00 24.65 ? 3 DG A "C4'" 1
ATOM 45 O "O4'" . DG A 1 3 ? 26.415 0.996 40.236 1.00 18.96 ? 3 DG A "O4'" 1
ATOM 46 C "C3'" . DG A 1 3 ? 25.608 0.111 38.158 1.00 20.26 ? 3 DG A "C3'" 1
ATOM 47 O "O3'" . DG A 1 3 ? 24.771 1.089 37.539 1.00 23.69 ? 3 DG A "O3'" 1
ATOM 48 C "C2'" . DG A 1 3 ? 27.072 0.493 38.079 1.00 24.21 ? 3 DG A "C2'" 1
ATOM 49 C "C1'" . DG A 1 3 ? 27.150 1.558 39.183 1.00 15.57 ? 3 DG A "C1'" 1
ATOM 50 N N9 . DG A 1 3 ? 28.511 1.785 39.630 1.00 19.82 ? 3 DG A N9 1
ATOM 51 C C8 . DG A 1 3 ? 29.564 0.886 39.702 1.00 17.45 ? 3 DG A C8 1
ATOM 52 N N7 . DG A 1 3 ? 30.674 1.428 40.141 1.00 24.59 ? 3 DG A N7 1
ATOM 53 C C5 . DG A 1 3 ? 30.341 2.770 40.369 1.00 21.52 ? 3 DG A C5 1
ATOM 54 C C6 . DG A 1 3 ? 31.136 3.852 40.821 1.00 19.87 ? 3 DG A C6 1
ATOM 55 O O6 . DG A 1 3 ? 32.339 3.842 41.140 1.00 22.05 ? 3 DG A O6 1
ATOM 56 N N1 . DG A 1 3 ? 30.416 5.041 40.891 1.00 19.72 ? 3 DG A N1 1
ATOM 57 C C2 . DG A 1 3 ? 29.085 5.144 40.591 1.00 18.88 ? 3 DG A C2 1
ATOM 58 N N2 . DG A 1 3 ? 28.520 6.344 40.727 1.00 20.26 ? 3 DG A N2 1
ATOM 59 N N3 . DG A 1 3 ? 28.307 4.145 40.166 1.00 17.02 ? 3 DG A N3 1
ATOM 60 C C4 . DG A 1 3 ? 29.027 2.993 40.057 1.00 20.86 ? 3 DG A C4 1
ATOM 61 P P . DA A 1 4 ? 24.540 1.230 35.970 1.00 24.80 ? 4 DA A P 1
ATOM 62 O OP1 . DA A 1 4 ? 23.082 1.084 35.747 1.00 29.00 ? 4 DA A OP1 1
ATOM 63 O OP2 . DA A 1 4 ? 25.543 0.422 35.226 1.00 30.41 ? 4 DA A OP2 1
ATOM 64 O "O5'" . DA A 1 4 ? 24.861 2.788 35.795 1.00 25.68 ? 4 DA A "O5'" 1
ATOM 65 C "C5'" . DA A 1 4 ? 24.020 3.747 36.369 1.00 29.16 ? 4 DA A "C5'" 1
ATOM 66 C "C4'" . DA A 1 4 ? 24.813 5.042 36.433 1.00 23.15 ? 4 DA A "C4'" 1
ATOM 67 O "O4'" . DA A 1 4 ? 25.942 4.841 37.283 1.00 21.07 ? 4 DA A "O4'" 1
ATOM 68 C "C3'" . DA A 1 4 ? 25.452 5.543 35.151 1.00 21.19 ? 4 DA A "C3'" 1
ATOM 69 O "O3'" . DA A 1 4 ? 24.484 6.289 34.464 1.00 26.36 ? 4 DA A "O3'" 1
ATOM 70 C "C2'" . DA A 1 4 ? 26.521 6.508 35.672 1.00 19.56 ? 4 DA A "C2'" 1
ATOM 71 C "C1'" . DA A 1 4 ? 26.909 5.818 36.966 1.00 26.08 ? 4 DA A "C1'" 1
ATOM 72 N N9 . DA A 1 4 ? 28.138 5.069 36.934 1.00 21.90 ? 4 DA A N9 1
ATOM 73 C C8 . DA A 1 4 ? 28.290 3.764 36.603 1.00 22.76 ? 4 DA A C8 1
ATOM 74 N N7 . DA A 1 4 ? 29.548 3.404 36.717 1.00 22.59 ? 4 DA A N7 1
ATOM 75 C C5 . DA A 1 4 ? 30.232 4.521 37.154 1.00 23.58 ? 4 DA A C5 1
ATOM 76 C C6 . DA A 1 4 ? 31.579 4.760 37.454 1.00 21.81 ? 4 DA A C6 1
ATOM 77 N N6 . DA A 1 4 ? 32.501 3.806 37.354 1.00 31.49 ? 4 DA A N6 1
ATOM 78 N N1 . DA A 1 4 ? 31.927 5.993 37.849 1.00 27.36 ? 4 DA A N1 1
ATOM 79 C C2 . DA A 1 4 ? 30.976 6.925 37.953 1.00 36.42 ? 4 DA A C2 1
ATOM 80 N N3 . DA A 1 4 ? 29.678 6.798 37.693 1.00 33.71 ? 4 DA A N3 1
ATOM 81 C C4 . DA A 1 4 ? 29.376 5.566 37.295 1.00 23.42 ? 4 DA A C4 1
ATOM 82 P P A DA A 1 5 ? 24.231 6.038 32.895 0.50 21.79 ? 5 DA A P 1
ATOM 83 P P B DA A 1 5 ? 24.152 6.028 32.917 0.50 58.45 ? 5 DA A P 1
ATOM 84 O OP1 A DA A 1 5 ? 23.121 6.948 32.532 0.50 53.71 ? 5 DA A OP1 1
ATOM 85 O OP1 B DA A 1 5 ? 22.846 6.708 32.701 0.50 35.12 ? 5 DA A OP1 1
ATOM 86 O OP2 A DA A 1 5 ? 24.141 4.574 32.683 0.50 54.81 ? 5 DA A OP2 1
ATOM 87 O OP2 B DA A 1 5 ? 24.360 4.600 32.589 0.50 31.54 ? 5 DA A OP2 1
ATOM 88 O "O5'" A DA A 1 5 ? 25.601 6.489 32.246 0.50 24.72 ? 5 DA A "O5'" 1
ATOM 89 O "O5'" B DA A 1 5 ? 25.209 6.959 32.241 0.50 46.18 ? 5 DA A "O5'" 1
ATOM 90 C "C5'" A DA A 1 5 ? 26.015 7.856 32.169 0.50 54.51 ? 5 DA A "C5'" 1
ATOM 91 C "C5'" B DA A 1 5 ? 26.358 6.528 31.621 0.50 74.06 ? 5 DA A "C5'" 1
ATOM 92 C "C4'" A DA A 1 5 ? 27.007 8.085 31.030 0.50 71.52 ? 5 DA A "C4'" 1
ATOM 93 C "C4'" B DA A 1 5 ? 26.945 7.769 30.995 0.50 38.88 ? 5 DA A "C4'" 1
ATOM 94 O "O4'" A DA A 1 5 ? 28.143 7.191 31.125 0.50 43.91 ? 5 DA A "O4'" 1
ATOM 95 O "O4'" B DA A 1 5 ? 28.379 7.601 31.014 0.50 32.26 ? 5 DA A "O4'" 1
ATOM 96 C "C3'" A DA A 1 5 ? 26.539 8.005 29.583 0.50 70.09 ? 5 DA A "C3'" 1
ATOM 97 C "C3'" B DA A 1 5 ? 26.564 7.958 29.539 0.50 67.82 ? 5 DA A "C3'" 1
ATOM 98 O "O3'" A DA A 1 5 ? 26.939 9.255 29.001 0.50 27.13 ? 5 DA A "O3'" 1
ATOM 99 O "O3'" B DA A 1 5 ? 26.948 9.268 29.059 0.50 30.82 ? 5 DA A "O3'" 1
ATOM 100 C "C2'" A DA A 1 5 ? 27.333 6.842 28.998 0.50 24.72 ? 5 DA A "C2'" 1
ATOM 101 C "C2'" B DA A 1 5 ? 27.406 6.852 28.949 0.50 38.37 ? 5 DA A "C2'" 1
ATOM 102 C "C1'" A DA A 1 5 ? 28.599 6.938 29.828 0.50 41.47 ? 5 DA A "C1'" 1
ATOM 103 C "C1'" B DA A 1 5 ? 28.685 7.022 29.763 0.50 21.74 ? 5 DA A "C1'" 1
ATOM 104 N N9 A DA A 1 5 ? 29.435 5.765 29.919 0.50 34.78 ? 5 DA A N9 1
ATOM 105 N N9 B DA A 1 5 ? 29.451 5.812 29.913 0.50 21.53 ? 5 DA A N9 1
ATOM 106 C C8 A DA A 1 5 ? 29.090 4.461 29.768 0.50 30.19 ? 5 DA A C8 1
ATOM 107 C C8 B DA A 1 5 ? 29.024 4.536 29.762 0.50 35.25 ? 5 DA A C8 1
ATOM 108 N N7 A DA A 1 5 ? 30.096 3.642 29.919 0.50 46.04 ? 5 DA A N7 1
ATOM 109 N N7 B DA A 1 5 ? 29.972 3.656 29.923 0.50 29.57 ? 5 DA A N7 1
ATOM 110 C C5 A DA A 1 5 ? 31.168 4.452 30.187 0.50 26.36 ? 5 DA A C5 1
ATOM 111 C C5 B DA A 1 5 ? 31.092 4.403 30.183 0.50 20.50 ? 5 DA A C5 1
ATOM 112 C C6 A DA A 1 5 ? 32.525 4.190 30.426 0.50 29.98 ? 5 DA A C6 1
ATOM 113 C C6 B DA A 1 5 ? 32.432 4.062 30.425 0.50 29.47 ? 5 DA A C6 1
ATOM 114 N N6 A DA A 1 5 ? 33.058 2.969 30.445 0.50 41.66 ? 5 DA A N6 1
ATOM 115 N N6 B DA A 1 5 ? 32.893 2.812 30.463 0.50 52.48 ? 5 DA A N6 1
ATOM 116 N N1 A DA A 1 5 ? 33.320 5.245 30.659 0.50 41.10 ? 5 DA A N1 1
ATOM 117 N N1 B DA A 1 5 ? 33.290 5.067 30.647 0.50 34.01 ? 5 DA A N1 1
ATOM 118 C C2 A DA A 1 5 ? 32.792 6.477 30.666 0.50 20.11 ? 5 DA A C2 1
ATOM 119 C C2 B DA A 1 5 ? 32.843 6.336 30.642 0.50 29.56 ? 5 DA A C2 1
ATOM 120 N N3 A DA A 1 5 ? 31.535 6.842 30.435 0.50 30.36 ? 5 DA A N3 1
ATOM 121 N N3 B DA A 1 5 ? 31.610 6.776 30.408 0.50 36.53 ? 5 DA A N3 1
ATOM 122 C C4 A DA A 1 5 ? 30.775 5.767 30.210 0.50 25.55 ? 5 DA A C4 1
ATOM 123 C C4 B DA A 1 5 ? 30.789 5.741 30.194 0.50 26.70 ? 5 DA A C4 1
ATOM 124 P P . DA A 1 6 ? 25.911 10.065 28.111 1.00 30.84 ? 6 DA A P 1
ATOM 125 O OP1 . DA A 1 6 ? 24.707 10.378 28.918 1.00 38.77 ? 6 DA A OP1 1
ATOM 126 O OP2 . DA A 1 6 ? 25.708 9.319 26.846 1.00 32.69 ? 6 DA A OP2 1
ATOM 127 O "O5'" . DA A 1 6 ? 26.730 11.398 27.826 1.00 25.76 ? 6 DA A "O5'" 1
ATOM 128 C "C5'" . DA A 1 6 ? 26.855 12.367 28.830 1.00 30.92 ? 6 DA A "C5'" 1
ATOM 129 C "C4'" . DA A 1 6 ? 27.014 13.647 28.065 1.00 28.30 ? 6 DA A "C4'" 1
ATOM 130 O "O4'" . DA A 1 6 ? 28.289 13.668 27.348 1.00 26.45 ? 6 DA A "O4'" 1
ATOM 131 C "C3'" . DA A 1 6 ? 25.937 13.907 27.027 1.00 21.54 ? 6 DA A "C3'" 1
ATOM 132 O "O3'" . DA A 1 6 ? 25.683 15.289 27.212 1.00 31.55 ? 6 DA A "O3'" 1
ATOM 133 C "C2'" . DA A 1 6 ? 26.621 13.596 25.692 1.00 19.64 ? 6 DA A "C2'" 1
ATOM 134 C "C1'" . DA A 1 6 ? 28.079 13.920 25.959 1.00 23.12 ? 6 DA A "C1'" 1
ATOM 135 N N9 . DA A 1 6 ? 29.075 13.075 25.315 1.00 22.93 ? 6 DA A N9 1
ATOM 136 C C8 . DA A 1 6 ? 29.006 11.732 25.035 1.00 20.93 ? 6 DA A C8 1
ATOM 137 N N7 . DA A 1 6 ? 30.116 11.261 24.507 1.00 19.11 ? 6 DA A N7 1
ATOM 138 C C5 . DA A 1 6 ? 30.964 12.370 24.487 1.00 17.52 ? 6 DA A C5 1
ATOM 139 C C6 . DA A 1 6 ? 32.296 12.539 24.094 1.00 19.96 ? 6 DA A C6 1
ATOM 140 N N6 . DA A 1 6 ? 33.041 11.550 23.575 1.00 17.05 ? 6 DA A N6 1
ATOM 141 N N1 . DA A 1 6 ? 32.829 13.761 24.196 1.00 20.45 ? 6 DA A N1 1
ATOM 142 C C2 . DA A 1 6 ? 32.099 14.752 24.712 1.00 21.02 ? 6 DA A C2 1
ATOM 143 N N3 . DA A 1 6 ? 30.844 14.724 25.128 1.00 24.33 ? 6 DA A N3 1
ATOM 144 C C4 . DA A 1 6 ? 30.330 13.494 24.989 1.00 16.92 ? 6 DA A C4 1
ATOM 145 P P . DG A 1 7 ? 24.668 16.147 26.316 1.00 29.25 ? 7 DG A P 1
ATOM 146 O OP1 . DG A 1 7 ? 24.422 17.415 27.089 1.00 49.02 ? 7 DG A OP1 1
ATOM 147 O OP2 . DG A 1 7 ? 23.536 15.245 25.965 1.00 27.08 ? 7 DG A OP2 1
ATOM 148 O "O5'" . DG A 1 7 ? 25.473 16.576 25.036 1.00 26.60 ? 7 DG A "O5'" 1
ATOM 149 C "C5'" . DG A 1 7 ? 26.636 17.358 25.143 1.00 27.47 ? 7 DG A "C5'" 1
ATOM 150 C "C4'" . DG A 1 7 ? 27.332 17.303 23.816 1.00 31.45 ? 7 DG A "C4'" 1
ATOM 151 O "O4'" . DG A 1 7 ? 27.932 16.001 23.562 1.00 28.49 ? 7 DG A "O4'" 1
ATOM 152 C "C3'" . DG A 1 7 ? 26.403 17.543 22.635 1.00 30.98 ? 7 DG A "C3'" 1
ATOM 153 O "O3'" . DG A 1 7 ? 26.813 18.780 22.144 1.00 34.88 ? 7 DG A "O3'" 1
ATOM 154 C "C2'" . DG A 1 7 ? 26.689 16.436 21.626 1.00 21.30 ? 7 DG A "C2'" 1
ATOM 155 C "C1'" . DG A 1 7 ? 27.954 15.803 22.169 1.00 22.16 ? 7 DG A "C1'" 1
ATOM 156 N N9 . DG A 1 7 ? 27.960 14.362 21.976 1.00 19.60 ? 7 DG A N9 1
ATOM 157 C C8 . DG A 1 7 ? 26.899 13.491 22.068 1.00 23.45 ? 7 DG A C8 1
ATOM 158 N N7 . DG A 1 7 ? 27.223 12.242 21.821 1.00 22.15 ? 7 DG A N7 1
ATOM 159 C C5 . DG A 1 7 ? 28.583 12.303 21.539 1.00 17.63 ? 7 DG A C5 1
ATOM 160 C C6 . DG A 1 7 ? 29.459 11.258 21.213 1.00 16.37 ? 7 DG A C6 1
ATOM 161 O O6 . DG A 1 7 ? 29.184 10.053 21.103 1.00 20.50 ? 7 DG A O6 1
ATOM 162 N N1 . DG A 1 7 ? 30.753 11.720 21.011 1.00 15.69 ? 7 DG A N1 1
ATOM 163 C C2 . DG A 1 7 ? 31.143 13.017 21.094 1.00 18.97 ? 7 DG A C2 1
ATOM 164 N N2 . DG A 1 7 ? 32.431 13.251 20.838 1.00 18.27 ? 7 DG A N2 1
ATOM 165 N N3 . DG A 1 7 ? 30.331 14.020 21.408 1.00 19.38 ? 7 DG A N3 1
ATOM 166 C C4 . DG A 1 7 ? 29.067 13.580 21.620 1.00 19.13 ? 7 DG A C4 1
ATOM 167 P P . DC A 1 8 ? 26.087 19.542 20.943 1.00 32.03 ? 8 DC A P 1
ATOM 168 O OP1 . DC A 1 8 ? 26.201 20.976 21.349 1.00 38.99 ? 8 DC A OP1 1
ATOM 169 O OP2 . DC A 1 8 ? 24.778 18.894 20.688 1.00 26.84 ? 8 DC A OP2 1
ATOM 170 O "O5'" . DC A 1 8 ? 27.084 19.377 19.735 1.00 29.15 ? 8 DC A "O5'" 1
ATOM 171 C "C5'" . DC A 1 8 ? 28.420 19.749 19.970 1.00 32.79 ? 8 DC A "C5'" 1
ATOM 172 C "C4'" . DC A 1 8 ? 29.367 18.994 19.051 1.00 31.63 ? 8 DC A "C4'" 1
ATOM 173 O "O4'" . DC A 1 8 ? 29.554 17.608 19.469 1.00 21.74 ? 8 DC A "O4'" 1
ATOM 174 C "C3'" . DC A 1 8 ? 28.923 18.859 17.620 1.00 30.76 ? 8 DC A "C3'" 1
ATOM 175 O "O3'" . DC A 1 8 ? 29.194 20.074 16.919 1.00 37.76 ? 8 DC A "O3'" 1
ATOM 176 C "C2'" . DC A 1 8 ? 29.845 17.746 17.124 1.00 30.09 ? 8 DC A "C2'" 1
ATOM 177 C "C1'" . DC A 1 8 ? 30.108 16.918 18.378 1.00 20.83 ? 8 DC A "C1'" 1
ATOM 178 N N1 . DC A 1 8 ? 29.457 15.543 18.325 1.00 17.35 ? 8 DC A N1 1
ATOM 179 C C2 . DC A 1 8 ? 30.284 14.425 18.108 1.00 17.08 ? 8 DC A C2 1
ATOM 180 O O2 . DC A 1 8 ? 31.486 14.566 17.972 1.00 19.45 ? 8 DC A O2 1
ATOM 181 N N3 . DC A 1 8 ? 29.700 13.233 18.054 1.00 16.76 ? 8 DC A N3 1
ATOM 182 C C4 . DC A 1 8 ? 28.390 13.118 18.210 1.00 18.59 ? 8 DC A C4 1
ATOM 183 N N4 . DC A 1 8 ? 27.881 11.896 18.168 1.00 18.11 ? 8 DC A N4 1
ATOM 184 C C5 . DC A 1 8 ? 27.505 14.215 18.439 1.00 18.78 ? 8 DC A C5 1
ATOM 185 C C6 . DC A 1 8 ? 28.109 15.419 18.495 1.00 17.34 ? 8 DC A C6 1
HETATM 186 MG MG . MG B 2 . ? 36.909 0.000 43.143 0.25 25.83 ? 2001 MG A MG 1
HETATM 187 MG MG . MG C 2 . ? 28.829 11.168 42.649 1.00 38.91 ? 1001 MG A MG 1
HETATM 188 O O . HOH D 3 . ? 28.201 9.978 44.208 1.00 35.60 ? 1002 HOH A O 1
HETATM 189 O O . HOH D 3 . ? 30.791 10.772 43.137 1.00 38.75 ? 1003 HOH A O 1
HETATM 190 O O . HOH D 3 . ? 28.848 12.803 43.901 1.00 54.02 ? 1004 HOH A O 1
HETATM 191 O O . HOH D 3 . ? 29.460 12.359 41.091 1.00 48.48 ? 1005 HOH A O 1
HETATM 192 O O . HOH D 3 . ? 26.868 11.559 42.157 1.00 39.52 ? 1006 HOH A O 1
HETATM 193 O O . HOH D 3 . ? 28.813 9.530 41.401 1.00 29.81 ? 1007 HOH A O 1
HETATM 194 O O . HOH D 3 . ? 37.036 0.999 54.302 0.25 58.42 ? 2002 HOH A O 1
HETATM 195 O O . HOH D 3 . ? 18.489 18.442 34.061 0.25 50.34 ? 2003 HOH A O 1
HETATM 196 O O . HOH D 3 . ? 18.436 18.473 38.507 0.25 52.97 ? 2004 HOH A O 1
HETATM 197 O O . HOH D 3 . ? 19.787 16.570 34.409 0.50 47.98 ? 2005 HOH A O 1
HETATM 198 O O . HOH D 3 . ? 31.213 7.517 41.749 1.00 24.18 ? 2006 HOH A O 1
HETATM 199 O O . HOH D 3 . ? 31.695 6.452 44.311 1.00 24.23 ? 2007 HOH A O 1
HETATM 200 O O . HOH D 3 . ? 34.430 7.497 38.455 1.00 26.02 ? 2008 HOH A O 1
HETATM 201 O O . HOH D 3 . ? 35.094 5.041 37.485 1.00 61.81 ? 2009 HOH A O 1
HETATM 202 O O . HOH D 3 . ? 28.194 9.035 38.789 1.00 27.34 ? 2010 HOH A O 1
HETATM 203 O O . HOH D 3 . ? 30.161 16.992 26.437 1.00 44.59 ? 2011 HOH A O 1
HETATM 204 O O . HOH D 3 . ? 34.425 5.684 41.482 1.00 29.30 ? 2012 HOH A O 1
HETATM 205 O O . HOH D 3 . ? 28.133 -3.618 49.386 1.00 31.78 ? 2013 HOH A O 1
HETATM 206 O O . HOH D 3 . ? 36.293 4.990 43.658 1.00 35.10 ? 2014 HOH A O 1
HETATM 207 O O . HOH D 3 . ? 31.445 16.641 21.875 1.00 29.16 ? 2015 HOH A O 1
HETATM 208 O O . HOH D 3 . ? 23.592 13.353 24.080 1.00 47.97 ? 2016 HOH A O 1
HETATM 209 O O . HOH D 3 . ? 22.851 12.866 28.683 1.00 46.64 ? 2017 HOH A O 1
HETATM 210 O O . HOH D 3 . ? 22.333 1.753 41.218 1.00 37.00 ? 2018 HOH A O 1
HETATM 211 O O . HOH D 3 . ? 30.304 7.082 50.524 1.00 37.59 ? 2019 HOH A O 1
HETATM 212 O O . HOH D 3 . ? 24.421 0.762 45.700 1.00 24.94 ? 2020 HOH A O 1
HETATM 213 O O . HOH D 3 . ? 21.055 4.877 30.637 1.00 58.55 ? 2021 HOH A O 1
HETATM 214 O O . HOH D 3 . ? 20.663 3.391 46.932 1.00 29.32 ? 2022 HOH A O 1
HETATM 215 O O . HOH D 3 . ? 29.032 9.151 46.759 1.00 49.35 ? 2023 HOH A O 1
HETATM 216 O O . HOH D 3 . ? 21.549 0.330 39.024 1.00 51.56 ? 2024 HOH A O 1
HETATM 217 O O . HOH D 3 . ? 35.081 4.447 51.235 1.00 44.81 ? 2025 HOH A O 1
HETATM 218 O O . HOH D 3 . ? 21.476 7.185 35.207 1.00 36.65 ? 2026 HOH A O 1
HETATM 219 O O . HOH D 3 . ? 21.500 1.129 45.207 1.00 49.68 ? 2027 HOH A O 1
HETATM 220 O O . HOH D 3 . ? 33.066 4.917 49.449 1.00 43.80 ? 2028 HOH A O 1
HETATM 221 O O . HOH D 3 . ? 31.217 7.660 46.784 1.00 32.35 ? 2029 HOH A O 1
HETATM 222 O O . HOH D 3 . ? 34.065 10.138 32.168 1.00 55.22 ? 2030 HOH A O 1
HETATM 223 O O . HOH D 3 . ? 32.716 3.796 45.299 1.00 34.08 ? 2031 HOH A O 1
HETATM 224 O O . HOH D 3 . ? 31.929 3.937 53.863 1.00 45.93 ? 2032 HOH A O 1
HETATM 225 O O . HOH D 3 . ? 29.800 12.432 38.361 1.00 33.78 ? 2033 HOH A O 1
HETATM 226 O O . HOH D 3 . ? 31.573 10.343 38.587 1.00 34.06 ? 2034 HOH A O 1
HETATM 227 O O . HOH D 3 . ? 27.519 15.153 40.708 1.00 39.18 ? 2035 HOH A O 1
HETATM 228 O O . HOH D 3 . ? 18.888 5.388 53.649 1.00 46.60 ? 2036 HOH A O 1
HETATM 229 O O . HOH D 3 . ? 24.663 10.677 31.864 1.00 34.23 ? 2037 HOH A O 1
HETATM 230 O O . HOH D 3 . ? 38.236 4.402 53.742 1.00 39.86 ? 2038 HOH A O 1
HETATM 231 O O . HOH D 3 . ? 37.792 6.585 36.028 1.00 52.73 ? 2039 HOH A O 1
HETATM 232 O O . HOH D 3 . ? 24.299 -1.698 47.153 1.00 48.28 ? 2040 HOH A O 1
HETATM 233 O O . HOH D 3 . ? 38.965 4.036 43.081 1.00 31.73 ? 2041 HOH A O 1
HETATM 234 O O . HOH D 3 . ? 20.936 2.985 43.217 1.00 40.67 ? 2042 HOH A O 1
HETATM 235 O O . HOH D 3 . ? 26.029 12.534 39.648 1.00 43.21 ? 2043 HOH A O 1
HETATM 236 O O . HOH D 3 . ? 35.716 1.749 43.105 1.00 35.10 ? 2044 HOH A O 1
HETATM 237 O O . HOH D 3 . ? 38.222 9.077 34.004 1.00 49.53 ? 2045 HOH A O 1
HETATM 238 O O . HOH D 3 . ? 32.112 9.002 31.382 1.00 59.88 ? 2046 HOH A O 1
HETATM 239 O O . HOH D 3 . ? 20.857 2.127 36.918 1.00 46.46 ? 2047 HOH A O 1
HETATM 240 O O . HOH D 3 . ? 21.841 17.121 24.785 1.00 70.43 ? 2048 HOH A O 1
HETATM 241 O O . HOH D 3 . ? 33.620 9.530 37.361 1.00 40.22 ? 2049 HOH A O 1
HETATM 242 O O . HOH D 3 . ? 35.985 2.231 31.257 1.00 63.77 ? 2050 HOH A O 1
HETATM 243 O O . HOH D 3 . ? 35.386 1.882 52.096 1.00 70.93 ? 2051 HOH A O 1
HETATM 244 O O . HOH D 3 . ? 21.537 3.409 33.386 1.00 74.60 ? 2052 HOH A O 1
HETATM 245 O O . HOH D 3 . ? 35.878 3.386 55.408 1.00 59.54 ? 2053 HOH A O 1
HETATM 246 O O . HOH D 3 . ? 20.049 4.561 35.864 1.00 51.32 ? 2054 HOH A O 1
HETATM 247 O O . HOH D 3 . ? 22.472 12.643 33.774 1.00 59.47 ? 2055 HOH A O 1
HETATM 248 O O . HOH D 3 . ? 18.211 3.452 38.888 1.00 64.99 ? 2056 HOH A O 1
HETATM 249 O O . HOH D 3 . ? 24.525 0.199 56.077 1.00 47.36 ? 2057 HOH A O 1
HETATM 250 O O . HOH D 3 . ? 19.608 13.989 34.687 1.00 64.15 ? 2058 HOH A O 1
HETATM 251 O O . HOH D 3 . ? 31.249 14.570 44.774 0.50 33.69 ? 2059 HOH A O 1
HETATM 252 O O . HOH D 3 . ? 31.518 4.962 51.547 0.50 18.20 ? 2060 HOH A O 1
HETATM 253 O O . HOH D 3 . ? 32.397 7.983 51.858 0.50 24.71 ? 2061 HOH A O 1
HETATM 254 O O . HOH D 3 . ? 38.962 14.146 20.882 0.50 36.56 ? 2062 HOH A O 1
HETATM 255 O O . HOH D 3 . ? 22.439 9.517 33.054 1.00 74.86 ? 2063 HOH A O 1
HETATM 256 O O . HOH D 3 . ? 34.076 5.372 54.820 0.50 78.44 ? 2064 HOH A O 1
HETATM 257 O O . HOH D 3 . ? 32.312 10.290 48.289 0.50 74.19 ? 2065 HOH A O 1
HETATM 258 O O . HOH D 3 . ? 30.342 1.440 30.140 1.00 74.88 ? 2066 HOH A O 1
HETATM 259 O O . HOH D 3 . ? 28.314 1.175 29.240 1.00 61.94 ? 2067 HOH A O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG DG A . n
A 1 2 DC 2 2 2 DC DC A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DA 4 4 4 DA DA A . n
A 1 5 DA 5 5 5 DA DA A . n
A 1 6 DA 6 6 6 DA DA A . n
A 1 7 DG 7 7 7 DG DG A . n
A 1 8 DC 8 8 8 DC DC A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 2001 2001 MG MG A .
C 2 MG 1 1001 1001 MG MG A .
D 3 HOH 1 1002 1002 HOH HOH A .
D 3 HOH 2 1003 1003 HOH HOH A .
D 3 HOH 3 1004 1004 HOH HOH A .
D 3 HOH 4 1005 1005 HOH HOH A .
D 3 HOH 5 1006 1006 HOH HOH A .
D 3 HOH 6 1007 1007 HOH HOH A .
D 3 HOH 7 2002 2002 HOH HOH A .
D 3 HOH 8 2003 2003 HOH HOH A .
D 3 HOH 9 2004 2004 HOH HOH A .
D 3 HOH 10 2005 2005 HOH HOH A .
D 3 HOH 11 2006 2006 HOH HOH A .
D 3 HOH 12 2007 2007 HOH HOH A .
D 3 HOH 13 2008 2008 HOH HOH A .
D 3 HOH 14 2009 2009 HOH HOH A .
D 3 HOH 15 2010 2010 HOH HOH A .
D 3 HOH 16 2011 2011 HOH HOH A .
D 3 HOH 17 2012 2012 HOH HOH A .
D 3 HOH 18 2013 2013 HOH HOH A .
D 3 HOH 19 2014 2014 HOH HOH A .
D 3 HOH 20 2015 2015 HOH HOH A .
D 3 HOH 21 2016 2016 HOH HOH A .
D 3 HOH 22 2017 2017 HOH HOH A .
D 3 HOH 23 2018 2018 HOH HOH A .
D 3 HOH 24 2019 2019 HOH HOH A .
D 3 HOH 25 2020 2020 HOH HOH A .
D 3 HOH 26 2021 2021 HOH HOH A .
D 3 HOH 27 2022 2022 HOH HOH A .
D 3 HOH 28 2023 2023 HOH HOH A .
D 3 HOH 29 2024 2024 HOH HOH A .
D 3 HOH 30 2025 2025 HOH HOH A .
D 3 HOH 31 2026 2026 HOH HOH A .
D 3 HOH 32 2027 2027 HOH HOH A .
D 3 HOH 33 2028 2028 HOH HOH A .
D 3 HOH 34 2029 2029 HOH HOH A .
D 3 HOH 35 2030 2030 HOH HOH A .
D 3 HOH 36 2031 2031 HOH HOH A .
D 3 HOH 37 2032 2032 HOH HOH A .
D 3 HOH 38 2033 2033 HOH HOH A .
D 3 HOH 39 2034 2034 HOH HOH A .
D 3 HOH 40 2035 2035 HOH HOH A .
D 3 HOH 41 2036 2036 HOH HOH A .
D 3 HOH 42 2037 2037 HOH HOH A .
D 3 HOH 43 2038 2038 HOH HOH A .
D 3 HOH 44 2039 2039 HOH HOH A .
D 3 HOH 45 2040 2040 HOH HOH A .
D 3 HOH 46 2041 2041 HOH HOH A .
D 3 HOH 47 2042 2042 HOH HOH A .
D 3 HOH 48 2043 2043 HOH HOH A .
D 3 HOH 49 2044 2044 HOH HOH A .
D 3 HOH 50 2045 2045 HOH HOH A .
D 3 HOH 51 2046 2046 HOH HOH A .
D 3 HOH 52 2047 2047 HOH HOH A .
D 3 HOH 53 2048 2048 HOH HOH A .
D 3 HOH 54 2049 2049 HOH HOH A .
D 3 HOH 55 2050 2050 HOH HOH A .
D 3 HOH 56 2051 2051 HOH HOH A .
D 3 HOH 57 2052 2052 HOH HOH A .
D 3 HOH 58 2053 2053 HOH HOH A .
D 3 HOH 59 2054 2054 HOH HOH A .
D 3 HOH 60 2055 2055 HOH HOH A .
D 3 HOH 61 2056 2056 HOH HOH A .
D 3 HOH 62 2057 2057 HOH HOH A .
D 3 HOH 63 2058 2058 HOH HOH A .
D 3 HOH 64 2059 2059 HOH HOH A .
D 3 HOH 65 2060 2060 HOH HOH A .
D 3 HOH 66 2061 2061 HOH HOH A .
D 3 HOH 67 2062 2062 HOH HOH A .
D 3 HOH 68 2063 2063 HOH HOH A .
D 3 HOH 69 2064 2064 HOH HOH A .
D 3 HOH 70 2065 2065 HOH HOH A .
D 3 HOH 71 2066 2066 HOH HOH A .
D 3 HOH 72 2067 2067 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details octameric
_pdbx_struct_assembly.oligomeric_count 8
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_755 -x+2,-y,z -1.0000000000 0.0000000000 0.0000000000 73.8180000000 0.0000000000
-1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
3 'crystal symmetry operation' 3_645 -y+1,x-1,z 0.0000000000 -1.0000000000 0.0000000000 36.9090000000 1.0000000000
0.0000000000 0.0000000000 -36.9090000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
4 'crystal symmetry operation' 4_665 y+1,-x+1,z 0.0000000000 1.0000000000 0.0000000000 36.9090000000 -1.0000000000
0.0000000000 0.0000000000 36.9090000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
5 'crystal symmetry operation' 5_756 -x+2,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 73.8180000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 64.3370000000
6 'crystal symmetry operation' 6_556 x,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
-1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 64.3370000000
7 'crystal symmetry operation' 7_646 y+1,x-1,-z+1 0.0000000000 1.0000000000 0.0000000000 36.9090000000 1.0000000000
0.0000000000 0.0000000000 -36.9090000000 0.0000000000 0.0000000000 -1.0000000000 64.3370000000
8 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0.0000000000 -1.0000000000 0.0000000000 36.9090000000 -1.0000000000
0.0000000000 0.0000000000 36.9090000000 0.0000000000 0.0000000000 -1.0000000000 64.3370000000
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A MG 2001 ? B MG .
2 1 A HOH 2003 ? D HOH .
3 1 A HOH 2004 ? D HOH .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1003 ? 1_555 90.0 ?
2 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 90.1 ?
3 O ? D HOH . ? A HOH 1003 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1004 ? 1_555 90.0 ?
4 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1005 ? 1_555 179.9 ?
5 O ? D HOH . ? A HOH 1003 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1005 ? 1_555 89.9 ?
6 O ? D HOH . ? A HOH 1004 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1005 ? 1_555 89.9 ?
7 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1006 ? 1_555 90.0 ?
8 O ? D HOH . ? A HOH 1003 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1006 ? 1_555 179.8 ?
9 O ? D HOH . ? A HOH 1004 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1006 ? 1_555 90.2 ?
10 O ? D HOH . ? A HOH 1005 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1006 ? 1_555 90.1 ?
11 O ? D HOH . ? A HOH 1002 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 89.8 ?
12 O ? D HOH . ? A HOH 1003 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 89.9 ?
13 O ? D HOH . ? A HOH 1004 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 179.8 ?
14 O ? D HOH . ? A HOH 1005 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 90.2 ?
15 O ? D HOH . ? A HOH 1006 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? D HOH . ? A HOH 1007 ? 1_555 89.9 ?
16 O ? D HOH . ? A HOH 2044 ? 1_555 MG ? B MG . ? A MG 2001 ? 1_555 O ? D HOH . ? A HOH 2044 ? 4_665 90.0 ?
17 O ? D HOH . ? A HOH 2044 ? 1_555 MG ? B MG . ? A MG 2001 ? 1_555 O ? D HOH . ? A HOH 2044 ? 2_755 177.9 ?
18 O ? D HOH . ? A HOH 2044 ? 4_665 MG ? B MG . ? A MG 2001 ? 1_555 O ? D HOH . ? A HOH 2044 ? 2_755 90.0 ?
19 O ? D HOH . ? A HOH 2044 ? 1_555 MG ? B MG . ? A MG 2001 ? 1_555 O ? D HOH . ? A HOH 2044 ? 3_645 90.0 ?
20 O ? D HOH . ? A HOH 2044 ? 4_665 MG ? B MG . ? A MG 2001 ? 1_555 O ? D HOH . ? A HOH 2044 ? 3_645 177.9 ?
21 O ? D HOH . ? A HOH 2044 ? 2_755 MG ? B MG . ? A MG 2001 ? 1_555 O ? D HOH . ? A HOH 2044 ? 3_645 90.0 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2007-08-14
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2023-10-25
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' pdbx_struct_conn_angle
6 3 'Structure model' struct_conn
7 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'
9 3 'Structure model' '_pdbx_struct_conn_angle.value'
10 3 'Structure model' '_struct_conn.pdbx_dist_value'
11 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
12 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
13 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
14 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
15 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
16 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
CNS refinement 1.1 ? 1
HKL-2000 'data collection' . ? 2
HKL-2000 'data reduction' . ? 3
HKL-2000 'data scaling' . ? 4
AMoRE phasing . ? 5
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 103.29 108.00 -4.71 0.70 N
2 1 N7 A DA 4 ? ? C8 A DA 4 ? ? N9 A DA 4 ? ? 110.50 113.80 -3.30 0.50 N
3 1 "O4'" A DA 5 ? B "C1'" A DA 5 ? B N9 A DA 5 ? B 111.57 108.30 3.27 0.30 N
4 1 "O5'" A DA 6 ? ? "C5'" A DA 6 ? ? "C4'" A DA 6 ? ? 103.55 109.40 -5.85 0.80 N
5 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 103.14 108.00 -4.86 0.70 N
6 1 N3 A DC 8 ? ? C4 A DC 8 ? ? C5 A DC 8 ? ? 124.42 121.90 2.52 0.40 N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
HOH O O N N 108
HOH H1 H N N 109
HOH H2 H N N 110
MG MG MG N N 111
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
HOH O H1 sing N N 113
HOH O H2 sing N N 114
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
2DZ7 'b-form double helix'
2DZ7 'mismatched base pair'
2DZ7 'internal loop'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 A DC 8 8_666 -0.292 -0.120 -0.035 -1.738 3.525 -2.173 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1
1 A DC 2 1_555 A DG 7 8_666 0.164 -0.106 -0.252 13.533 5.894 -1.769 2 A_DC2:DG7_A A 2 ? A 7 ? 19 1
1 A DG 3 1_555 A DA 6 8_666 6.530 -4.369 1.104 29.762 -9.721 9.728 3 A_DG3:DA6_A A 3 ? A 6 ? 11 9
1 A DG 1 1_555 A DC 8 1_555 -0.292 -0.120 -0.035 -1.738 3.525 -2.173 4 A_DG1:DC8_A A 1 ? A 8 ? 19 1
1 A DC 2 1_555 A DG 7 1_555 0.164 -0.106 -0.252 13.533 5.894 -1.769 5 A_DC2:DG7_A A 2 ? A 7 ? 19 1
1 A DG 3 1_555 A DA 6 1_555 6.530 -4.369 1.104 29.762 -9.721 9.728 6 A_DG3:DA6_A A 3 ? A 6 ? 11 9
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 A DC 8 8_666 A DC 2 1_555 A DG 7 8_666 0.018 -0.055 3.042 1.882 0.266 27.313 -0.177 0.395 3.036 0.563 -3.980
27.378 1 AA_DG1DC2:DG7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ?
1 A DC 2 1_555 A DG 7 8_666 A DG 3 1_555 A DA 6 8_666 0.526 1.668 3.074 0.700 8.164 55.965 1.315 -0.517 3.274 8.648 -0.741
56.514 2 AA_DC2DG3:DA6DG7_AA A 2 ? A 7 ? A 3 ? A 6 ?
1 A DG 1 1_555 A DC 8 1_555 A DC 2 1_555 A DG 7 1_555 0.018 -0.055 3.042 1.882 0.266 27.313 -0.177 0.395 3.036 0.563 -3.980
27.378 3 AA_DG1DC2:DG7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ?
1 A DC 2 1_555 A DG 7 1_555 A DG 3 1_555 A DA 6 1_555 0.526 1.668 3.074 0.700 8.164 55.965 1.315 -0.517 3.274 8.647 -0.741
56.514 4 AA_DC2DG3:DA6DG7_AA A 2 ? A 7 ? A 3 ? A 6 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1UE3
_pdbx_initial_refinement_model.details '1UE3(PDB code)'
#