data_274D
#
_entry.id 274D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 274D pdb_0000274d 10.2210/pdb274d/pdb
RCSB GDJB29 ? ?
WWPDB D_1000177686 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1994-10-21
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-14
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_conn
5 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
4 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
6 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
12 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'
16 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
17 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
18 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 274D
_pdbx_database_status.recvd_initial_deposition_date 1994-04-28
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.SG_entry .
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Kopka, M.L.' 1
'Goodsell, D.S.' 2
'Baikalov, I.' 3
'Grzeskowiak, K.' 4
'Cascio, D.' 5
'Dickerson, R.E.' 6
#
_citation.id primary
_citation.title
;Crystal structure of a covalent DNA-drug adduct: anthramycin bound to C-C-A-A-C-G-T-T-G-G and a molecular explanation of specificity.
;
_citation.journal_abbrev Biochemistry
_citation.journal_volume 33
_citation.page_first 13593
_citation.page_last 13610
_citation.year 1994
_citation.journal_id_ASTM BICHAW
_citation.country US
_citation.journal_id_ISSN 0006-2960
_citation.journal_id_CSD 0033
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 7947769
_citation.pdbx_database_id_DOI 10.1021/bi00250a011
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Kopka, M.L.' 1 ?
primary 'Goodsell, D.S.' 2 ?
primary 'Baikalov, I.' 3 ?
primary 'Grzeskowiak, K.' 4 ?
primary 'Cascio, D.' 5 ?
primary 'Dickerson, R.E.' 6 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*(DRUG)GP*G)-3')
;
3045.004 1 ? ? ? ?
2 non-polymer syn ANTHRAMYCIN 315.324 1 ? ? ? ?
3 water nat water 18.015 22 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DA)(DA)(DC)(DG)(DT)(DT)(DG)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CCAACGTTGG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 ANTHRAMYCIN ANT
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DC n
1 3 DA n
1 4 DA n
1 5 DC n
1 6 DG n
1 7 DT n
1 8 DT n
1 9 DG n
1 10 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ANT non-polymer . ANTHRAMYCIN ? 'C16 H17 N3 O4' 315.324
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DC 2 2 2 DC C A . n
A 1 3 DA 3 3 3 DA A A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DG 6 6 6 DG G A . n
A 1 7 DT 7 7 7 DT T A . n
A 1 8 DT 8 8 8 DT T A . n
A 1 9 DG 9 9 9 DG +G A . n
A 1 10 DG 10 10 10 DG G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANT 1 11 11 ANT ANT A .
C 3 HOH 1 12 12 HOH HOH A .
C 3 HOH 2 13 13 HOH HOH A .
C 3 HOH 3 14 14 HOH HOH A .
C 3 HOH 4 15 15 HOH HOH A .
C 3 HOH 5 16 16 HOH HOH A .
C 3 HOH 6 17 17 HOH HOH A .
C 3 HOH 7 18 18 HOH HOH A .
C 3 HOH 8 19 19 HOH HOH A .
C 3 HOH 9 20 20 HOH HOH A .
C 3 HOH 10 21 21 HOH HOH A .
C 3 HOH 11 22 22 HOH HOH A .
C 3 HOH 12 23 23 HOH HOH A .
C 3 HOH 13 24 24 HOH HOH A .
C 3 HOH 14 25 25 HOH HOH A .
C 3 HOH 15 26 26 HOH HOH A .
C 3 HOH 16 27 27 HOH HOH A .
C 3 HOH 17 28 28 HOH HOH A .
C 3 HOH 18 29 29 HOH HOH A .
C 3 HOH 19 30 30 HOH HOH A .
C 3 HOH 20 31 31 HOH HOH A .
C 3 HOH 21 32 32 HOH HOH A .
C 3 HOH 22 33 33 HOH HOH A .
#
_software.name NUCLSQ
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 274D
_cell.length_a 23.950
_cell.length_b 23.950
_cell.length_c 88.890
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 274D
_symmetry.space_group_name_H-M 'P 32 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 154
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 274D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 49.11
_exptl_crystal.density_Matthews 2.42
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 277.00
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, SITTING DROP, temperature 277.00K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 METHANOL ? ? ?
1 3 1 MPD ? ? ?
1 4 1 MGCL2 ? ? ?
1 5 2 WATER ? ? ?
1 6 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.crystal_id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS II'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source ?
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 274D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F 2.000
_reflns.d_resolution_low ?
_reflns.d_resolution_high 2.300
_reflns.number_obs 1212
_reflns.number_all ?
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 274D
_refine.ls_number_reflns_obs 1212
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 2.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.000
_refine.ls_d_res_high 2.300
_refine.ls_percent_reflns_obs 90.000
_refine.ls_R_factor_obs 0.2120000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_overall_phase_error ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 202
_refine_hist.pdbx_number_atoms_ligand 22
_refine_hist.number_atoms_solvent 22
_refine_hist.number_atoms_total 246
_refine_hist.d_res_high 2.300
_refine_hist.d_res_low 8.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
n_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_it 5.102 6.000 ? ? 'X-RAY DIFFRACTION' ?
n_sugar_angle_it 6.534 6.000 ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_it 6.213 6.000 ? ? 'X-RAY DIFFRACTION' ?
n_phos_angle_it 6.743 6.000 ? ? 'X-RAY DIFFRACTION' ?
n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_d 0.030 0.030 ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_angle_d 0.058 0.040 ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_d 0.032 0.030 ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_angle_d 0.061 0.040 ? ? 'X-RAY DIFFRACTION' ?
n_plane_restr 0.018 0.020 ? ? 'X-RAY DIFFRACTION' ?
n_chiral_restr 0.207 0.150 ? ? 'X-RAY DIFFRACTION' ?
n_singtor_nbd 0.088 0.100 ? ? 'X-RAY DIFFRACTION' ?
n_multtor_nbd 0.115 0.100 ? ? 'X-RAY DIFFRACTION' ?
n_xhyhbond_nbd 0.183 0.100 ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 274D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 274D
_struct.title
;CRYSTAL STRUCTURE OF A COVALENT DNA-DRUG ADDUCT: ANTHRAMYCIN BOUND TO C-C-A-A-C-G-T-T-G-G, AND A MOLECULAR EXPLANATION OF SPECIFICITY
;
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 274D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 274D
_struct_ref.pdbx_db_accession 274D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 274D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 10
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 274D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 10
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 29.6300000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale one ? A DG 9 N2 ? ? ? 1_555 B ANT . C11 ? ? A DG 9 A ANT 11 1_555 ? ? ? ? ? ? ? 1.340 ? ?
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 10 N1 ? ? A DC 1 A DG 10 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 1 A DG 10 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 10 N2 ? ? A DC 1 A DG 10 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 3 A DT 8 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 3 A DT 8 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 7 N3 ? ? A DA 4 A DT 7 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 7 O4 ? ? A DA 4 A DT 7 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 5 A DG 6 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 5 A DG 6 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 5 A DG 6 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 6 A DC 5 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 6 A DC 5 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 6 A DC 5 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 7 A DA 4 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 7 A DA 4 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 8 A DA 3 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 8 A DA 3 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 10 A DC 1 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 10 A DC 1 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 10 A DC 1 5_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A ANT 11 ? 8 'BINDING SITE FOR RESIDUE ANT A 11'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 8 DC A 2 ? DC A 2 . ? 5_555 ?
2 AC1 8 DA A 3 ? DA A 3 . ? 5_555 ?
3 AC1 8 DA A 4 ? DA A 4 . ? 5_555 ?
4 AC1 8 DT A 8 ? DT A 8 . ? 1_555 ?
5 AC1 8 DG A 9 ? DG A 9 . ? 1_555 ?
6 AC1 8 DG A 10 ? DG A 10 . ? 1_555 ?
7 AC1 8 DG A 10 ? DG A 10 . ? 6_765 ?
8 AC1 8 HOH C . ? HOH A 32 . ? 1_555 ?
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 OP2
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 DC
_pdbx_validate_symm_contact.auth_seq_id_1 2
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 14
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 5_555
_pdbx_validate_symm_contact.dist 1.96
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "O5'" A DC 1 ? ? "C5'" A DC 1 ? ? 1.537 1.440 0.097 0.016 N
2 1 "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 1.406 1.518 -0.112 0.010 N
3 1 C6 A DA 3 ? ? N1 A DA 3 ? ? 1.413 1.351 0.062 0.007 N
4 1 N7 A DA 3 ? ? C8 A DA 3 ? ? 1.356 1.311 0.045 0.007 N
5 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? 1.496 1.420 0.076 0.011 N
6 1 C2 A DA 4 ? ? N3 A DA 4 ? ? 1.437 1.331 0.106 0.009 N
7 1 C2 A DC 5 ? ? N3 A DC 5 ? ? 1.405 1.353 0.052 0.008 N
8 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? 1.504 1.420 0.084 0.011 N
9 1 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? 1.385 1.446 -0.061 0.010 N
10 1 "C2'" A DT 7 ? ? "C1'" A DT 7 ? ? 1.598 1.519 0.079 0.010 N
11 1 C4 A DT 7 ? ? C5 A DT 7 ? ? 1.380 1.445 -0.065 0.009 N
12 1 C2 A DT 7 ? ? O2 A DT 7 ? ? 1.287 1.220 0.067 0.008 N
13 1 C4 A DT 7 ? ? O4 A DT 7 ? ? 1.317 1.228 0.089 0.009 N
14 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? 1.503 1.420 0.083 0.011 N
15 1 C2 A DT 8 ? ? O2 A DT 8 ? ? 1.276 1.220 0.056 0.008 N
16 1 C4 A DT 8 ? ? O4 A DT 8 ? ? 1.305 1.228 0.077 0.009 N
17 1 P A DG 9 ? ? "O5'" A DG 9 ? ? 1.679 1.593 0.086 0.010 N
18 1 C8 A DG 9 ? ? N9 A DG 9 ? ? 1.317 1.374 -0.057 0.007 N
19 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? 1.488 1.420 0.068 0.011 N
20 1 C6 A DG 10 ? ? N1 A DG 10 ? ? 1.349 1.391 -0.042 0.007 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O5'" A DC 1 ? ? "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 100.97 109.40 -8.43 0.80 N
2 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 97.54 104.50 -6.96 0.40 N
3 1 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 98.90 110.10 -11.20 1.00 N
4 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.81 108.30 3.51 0.30 N
5 1 C6 A DC 1 ? ? N1 A DC 1 ? ? C2 A DC 1 ? ? 122.85 120.30 2.55 0.40 N
6 1 N3 A DC 1 ? ? C4 A DC 1 ? ? N4 A DC 1 ? ? 122.73 118.00 4.73 0.70 N
7 1 P A DC 2 ? ? "O5'" A DC 2 ? ? "C5'" A DC 2 ? ? 110.85 120.90 -10.05 1.60 N
8 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.72 108.30 2.42 0.30 N
9 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 109.98 119.70 -9.72 1.20 Y
10 1 "O5'" A DA 3 ? ? P A DA 3 ? ? OP2 A DA 3 ? ? 125.23 110.70 14.53 1.20 N
11 1 "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 101.52 104.50 -2.98 0.40 N
12 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 99.43 105.90 -6.47 0.80 N
13 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.84 108.30 5.54 0.30 N
14 1 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.43 118.60 -4.17 0.60 N
15 1 "C3'" A DA 3 ? ? "O3'" A DA 3 ? ? P A DA 4 ? ? 106.35 119.70 -13.35 1.20 Y
16 1 OP1 A DA 4 ? ? P A DA 4 ? ? OP2 A DA 4 ? ? 109.89 119.60 -9.71 1.50 N
17 1 "O5'" A DA 4 ? ? P A DA 4 ? ? OP1 A DA 4 ? ? 119.97 110.70 9.27 1.20 N
18 1 "O4'" A DA 4 ? ? "C4'" A DA 4 ? ? "C3'" A DA 4 ? ? 101.44 104.50 -3.06 0.40 N
19 1 "C1'" A DA 4 ? ? "O4'" A DA 4 ? ? "C4'" A DA 4 ? ? 116.60 110.30 6.30 0.70 N
20 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? "C2'" A DA 4 ? ? 91.82 105.90 -14.08 0.80 N
21 1 C6 A DA 4 ? ? N1 A DA 4 ? ? C2 A DA 4 ? ? 126.38 118.60 7.78 0.60 N
22 1 N1 A DA 4 ? ? C2 A DA 4 ? ? N3 A DA 4 ? ? 115.59 129.30 -13.71 0.50 N
23 1 C2 A DA 4 ? ? N3 A DA 4 ? ? C4 A DA 4 ? ? 117.74 110.60 7.14 0.50 N
24 1 C4 A DA 4 ? ? C5 A DA 4 ? ? C6 A DA 4 ? ? 120.55 117.00 3.55 0.50 N
25 1 N1 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 112.89 118.60 -5.71 0.60 N
26 1 C5 A DA 4 ? ? C6 A DA 4 ? ? N6 A DA 4 ? ? 131.94 123.70 8.24 0.80 N
27 1 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 99.50 104.50 -5.00 0.40 N
28 1 "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 97.48 102.20 -4.72 0.70 N
29 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 114.55 108.30 6.25 0.30 N
30 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 123.79 118.90 4.89 0.60 N
31 1 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 116.32 121.90 -5.58 0.70 N
32 1 N3 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 113.51 118.00 -4.49 0.70 N
33 1 P A DG 6 ? ? "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? 109.56 120.90 -11.34 1.60 N
34 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? "C2'" A DG 6 ? ? 100.79 105.90 -5.11 0.80 N
35 1 C6 A DG 6 ? ? N1 A DG 6 ? ? C2 A DG 6 ? ? 117.46 125.10 -7.64 0.60 N
36 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N3 A DG 6 ? ? 128.21 123.90 4.31 0.60 N
37 1 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 117.14 111.50 5.64 0.50 N
38 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N2 A DG 6 ? ? 108.80 116.20 -7.40 0.90 N
39 1 N1 A DG 6 ? ? C6 A DG 6 ? ? O6 A DG 6 ? ? 115.47 119.90 -4.43 0.60 N
40 1 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? 99.15 104.50 -5.35 0.40 N
41 1 "C5'" A DT 7 ? ? "C4'" A DT 7 ? ? "O4'" A DT 7 ? ? 118.01 109.80 8.21 1.10 N
42 1 "C4'" A DT 7 ? ? "C3'" A DT 7 ? ? "C2'" A DT 7 ? ? 97.23 102.20 -4.97 0.70 N
43 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? "C2'" A DT 7 ? ? 100.54 105.90 -5.36 0.80 N
44 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 123.62 108.30 15.32 0.30 N
45 1 C6 A DT 7 ? ? N1 A DT 7 ? ? C2 A DT 7 ? ? 116.80 121.30 -4.50 0.50 N
46 1 N1 A DT 7 ? ? C2 A DT 7 ? ? N3 A DT 7 ? ? 118.68 114.60 4.08 0.60 N
47 1 C2 A DT 7 ? ? N3 A DT 7 ? ? C4 A DT 7 ? ? 121.85 127.20 -5.35 0.60 N
48 1 N1 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 129.63 123.10 6.53 0.80 N
49 1 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 111.54 122.30 -10.76 0.60 N
50 1 N3 A DT 7 ? ? C4 A DT 7 ? ? O4 A DT 7 ? ? 112.58 119.90 -7.32 0.60 N
51 1 "C3'" A DT 7 ? ? "O3'" A DT 7 ? ? P A DT 8 ? ? 134.19 119.70 14.49 1.20 Y
52 1 "O5'" A DT 8 ? ? P A DT 8 ? ? OP2 A DT 8 ? ? 118.66 110.70 7.96 1.20 N
53 1 "O4'" A DT 8 ? ? "C4'" A DT 8 ? ? "C3'" A DT 8 ? ? 99.76 104.50 -4.74 0.40 N
54 1 "C5'" A DT 8 ? ? "C4'" A DT 8 ? ? "O4'" A DT 8 ? ? 120.05 109.80 10.25 1.10 N
55 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.68 108.30 2.38 0.30 N
56 1 N1 A DT 8 ? ? C2 A DT 8 ? ? N3 A DT 8 ? ? 119.47 114.60 4.87 0.60 N
57 1 C2 A DT 8 ? ? N3 A DT 8 ? ? C4 A DT 8 ? ? 118.79 127.20 -8.41 0.60 N
58 1 N3 A DT 8 ? ? C4 A DT 8 ? ? C5 A DT 8 ? ? 120.78 115.20 5.58 0.60 N
59 1 N3 A DT 8 ? ? C4 A DT 8 ? ? O4 A DT 8 ? ? 115.14 119.90 -4.76 0.60 N
60 1 OP1 A DG 9 ? ? P A DG 9 ? ? OP2 A DG 9 ? ? 129.87 119.60 10.27 1.50 N
61 1 P A DG 9 ? ? "O5'" A DG 9 ? ? "C5'" A DG 9 ? ? 106.75 120.90 -14.15 1.60 N
62 1 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 125.89 115.70 10.19 1.20 N
63 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? "C2'" A DG 9 ? ? 111.09 106.80 4.29 0.50 N
64 1 C6 A DG 9 ? ? N1 A DG 9 ? ? C2 A DG 9 ? ? 120.24 125.10 -4.86 0.60 N
65 1 C5 A DG 9 ? ? C6 A DG 9 ? ? N1 A DG 9 ? ? 114.95 111.50 3.45 0.50 N
66 1 N3 A DG 9 ? ? C4 A DG 9 ? ? N9 A DG 9 ? ? 129.80 126.00 3.80 0.60 N
67 1 N1 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 105.38 116.20 -10.82 0.90 N
68 1 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 128.35 119.90 8.45 0.70 N
69 1 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 114.03 119.90 -5.87 0.60 N
70 1 "C3'" A DG 9 ? ? "O3'" A DG 9 ? ? P A DG 10 ? ? 136.87 119.70 17.17 1.20 Y
71 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 94.41 105.90 -11.49 0.80 N
72 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 103.75 108.00 -4.25 0.70 N
73 1 C6 A DG 10 ? ? N1 A DG 10 ? ? C2 A DG 10 ? ? 120.24 125.10 -4.86 0.60 N
74 1 C5 A DG 10 ? ? C6 A DG 10 ? ? N1 A DG 10 ? ? 116.01 111.50 4.51 0.50 N
75 1 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 124.21 119.90 4.31 0.60 N
76 1 C5 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 119.75 128.60 -8.85 0.60 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text 'GROOVE BINDER, COVALENT'
#
loop_
_refine_B_iso.class
_refine_B_iso.details
_refine_B_iso.treatment
_refine_B_iso.pdbx_refine_id
'ALL ATOMS' ? ? 'X-RAY DIFFRACTION'
'ALL WATERS' ? ? 'X-RAY DIFFRACTION'
#
loop_
_refine_occupancy.class
_refine_occupancy.treatment
_refine_occupancy.pdbx_refine_id
'ALL ATOMS' ? 'X-RAY DIFFRACTION'
'ALL WATERS' ? 'X-RAY DIFFRACTION'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ANT C1 C N N 1
ANT C2 C N N 2
ANT C3 C N N 3
ANT N4 N N N 4
ANT C5 C N N 5
ANT O5 O N N 6
ANT C5A C Y N 7
ANT C6 C Y N 8
ANT C7 C Y N 9
ANT C8 C Y N 10
ANT C8M C N N 11
ANT C9 C Y N 12
ANT C9A C Y N 13
ANT O9 O N N 14
ANT N10 N N N 15
ANT C11 C N S 16
ANT O11 O N N 17
ANT C4A C N S 18
ANT C12 C N N 19
ANT C13 C N N 20
ANT C14 C N N 21
ANT O14 O N N 22
ANT N15 N N N 23
ANT H11A H N N 24
ANT H12A H N N 25
ANT H3 H N N 26
ANT H6 H N N 27
ANT H7 H N N 28
ANT HM81 H N N 29
ANT HM82 H N N 30
ANT HM83 H N N 31
ANT HO9 H N N 32
ANT HN H N N 33
ANT H11 H N N 34
ANT HO1 H N N 35
ANT H4A H N N 36
ANT H12 H N N 37
ANT H13 H N N 38
ANT HN51 H N N 39
ANT HN52 H N N 40
DA OP3 O N N 41
DA P P N N 42
DA OP1 O N N 43
DA OP2 O N N 44
DA "O5'" O N N 45
DA "C5'" C N N 46
DA "C4'" C N R 47
DA "O4'" O N N 48
DA "C3'" C N S 49
DA "O3'" O N N 50
DA "C2'" C N N 51
DA "C1'" C N R 52
DA N9 N Y N 53
DA C8 C Y N 54
DA N7 N Y N 55
DA C5 C Y N 56
DA C6 C Y N 57
DA N6 N N N 58
DA N1 N Y N 59
DA C2 C Y N 60
DA N3 N Y N 61
DA C4 C Y N 62
DA HOP3 H N N 63
DA HOP2 H N N 64
DA "H5'" H N N 65
DA "H5''" H N N 66
DA "H4'" H N N 67
DA "H3'" H N N 68
DA "HO3'" H N N 69
DA "H2'" H N N 70
DA "H2''" H N N 71
DA "H1'" H N N 72
DA H8 H N N 73
DA H61 H N N 74
DA H62 H N N 75
DA H2 H N N 76
DC OP3 O N N 77
DC P P N N 78
DC OP1 O N N 79
DC OP2 O N N 80
DC "O5'" O N N 81
DC "C5'" C N N 82
DC "C4'" C N R 83
DC "O4'" O N N 84
DC "C3'" C N S 85
DC "O3'" O N N 86
DC "C2'" C N N 87
DC "C1'" C N R 88
DC N1 N N N 89
DC C2 C N N 90
DC O2 O N N 91
DC N3 N N N 92
DC C4 C N N 93
DC N4 N N N 94
DC C5 C N N 95
DC C6 C N N 96
DC HOP3 H N N 97
DC HOP2 H N N 98
DC "H5'" H N N 99
DC "H5''" H N N 100
DC "H4'" H N N 101
DC "H3'" H N N 102
DC "HO3'" H N N 103
DC "H2'" H N N 104
DC "H2''" H N N 105
DC "H1'" H N N 106
DC H41 H N N 107
DC H42 H N N 108
DC H5 H N N 109
DC H6 H N N 110
DG OP3 O N N 111
DG P P N N 112
DG OP1 O N N 113
DG OP2 O N N 114
DG "O5'" O N N 115
DG "C5'" C N N 116
DG "C4'" C N R 117
DG "O4'" O N N 118
DG "C3'" C N S 119
DG "O3'" O N N 120
DG "C2'" C N N 121
DG "C1'" C N R 122
DG N9 N Y N 123
DG C8 C Y N 124
DG N7 N Y N 125
DG C5 C Y N 126
DG C6 C N N 127
DG O6 O N N 128
DG N1 N N N 129
DG C2 C N N 130
DG N2 N N N 131
DG N3 N N N 132
DG C4 C Y N 133
DG HOP3 H N N 134
DG HOP2 H N N 135
DG "H5'" H N N 136
DG "H5''" H N N 137
DG "H4'" H N N 138
DG "H3'" H N N 139
DG "HO3'" H N N 140
DG "H2'" H N N 141
DG "H2''" H N N 142
DG "H1'" H N N 143
DG H8 H N N 144
DG H1 H N N 145
DG H21 H N N 146
DG H22 H N N 147
DT OP3 O N N 148
DT P P N N 149
DT OP1 O N N 150
DT OP2 O N N 151
DT "O5'" O N N 152
DT "C5'" C N N 153
DT "C4'" C N R 154
DT "O4'" O N N 155
DT "C3'" C N S 156
DT "O3'" O N N 157
DT "C2'" C N N 158
DT "C1'" C N R 159
DT N1 N N N 160
DT C2 C N N 161
DT O2 O N N 162
DT N3 N N N 163
DT C4 C N N 164
DT O4 O N N 165
DT C5 C N N 166
DT C7 C N N 167
DT C6 C N N 168
DT HOP3 H N N 169
DT HOP2 H N N 170
DT "H5'" H N N 171
DT "H5''" H N N 172
DT "H4'" H N N 173
DT "H3'" H N N 174
DT "HO3'" H N N 175
DT "H2'" H N N 176
DT "H2''" H N N 177
DT "H1'" H N N 178
DT H3 H N N 179
DT H71 H N N 180
DT H72 H N N 181
DT H73 H N N 182
DT H6 H N N 183
HOH O O N N 184
HOH H1 H N N 185
HOH H2 H N N 186
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ANT C1 C2 sing N N 1
ANT C1 C4A sing N N 2
ANT C1 H11A sing N N 3
ANT C1 H12A sing N N 4
ANT C2 C3 doub N N 5
ANT C2 C12 sing N N 6
ANT C3 N4 sing N N 7
ANT C3 H3 sing N N 8
ANT N4 C5 sing N N 9
ANT N4 C4A sing N N 10
ANT C5 O5 doub N N 11
ANT C5 C5A sing N N 12
ANT C5A C6 doub Y N 13
ANT C5A C9A sing Y N 14
ANT C6 C7 sing Y N 15
ANT C6 H6 sing N N 16
ANT C7 C8 doub Y N 17
ANT C7 H7 sing N N 18
ANT C8 C8M sing N N 19
ANT C8 C9 sing Y N 20
ANT C8M HM81 sing N N 21
ANT C8M HM82 sing N N 22
ANT C8M HM83 sing N N 23
ANT C9 C9A doub Y N 24
ANT C9 O9 sing N N 25
ANT C9A N10 sing N N 26
ANT O9 HO9 sing N N 27
ANT N10 C11 sing N N 28
ANT N10 HN sing N N 29
ANT C11 O11 sing N N 30
ANT C11 C4A sing N N 31
ANT C11 H11 sing N N 32
ANT O11 HO1 sing N N 33
ANT C4A H4A sing N N 34
ANT C12 C13 doub N E 35
ANT C12 H12 sing N N 36
ANT C13 C14 sing N N 37
ANT C13 H13 sing N N 38
ANT C14 O14 doub N N 39
ANT C14 N15 sing N N 40
ANT N15 HN51 sing N N 41
ANT N15 HN52 sing N N 42
DA OP3 P sing N N 43
DA OP3 HOP3 sing N N 44
DA P OP1 doub N N 45
DA P OP2 sing N N 46
DA P "O5'" sing N N 47
DA OP2 HOP2 sing N N 48
DA "O5'" "C5'" sing N N 49
DA "C5'" "C4'" sing N N 50
DA "C5'" "H5'" sing N N 51
DA "C5'" "H5''" sing N N 52
DA "C4'" "O4'" sing N N 53
DA "C4'" "C3'" sing N N 54
DA "C4'" "H4'" sing N N 55
DA "O4'" "C1'" sing N N 56
DA "C3'" "O3'" sing N N 57
DA "C3'" "C2'" sing N N 58
DA "C3'" "H3'" sing N N 59
DA "O3'" "HO3'" sing N N 60
DA "C2'" "C1'" sing N N 61
DA "C2'" "H2'" sing N N 62
DA "C2'" "H2''" sing N N 63
DA "C1'" N9 sing N N 64
DA "C1'" "H1'" sing N N 65
DA N9 C8 sing Y N 66
DA N9 C4 sing Y N 67
DA C8 N7 doub Y N 68
DA C8 H8 sing N N 69
DA N7 C5 sing Y N 70
DA C5 C6 sing Y N 71
DA C5 C4 doub Y N 72
DA C6 N6 sing N N 73
DA C6 N1 doub Y N 74
DA N6 H61 sing N N 75
DA N6 H62 sing N N 76
DA N1 C2 sing Y N 77
DA C2 N3 doub Y N 78
DA C2 H2 sing N N 79
DA N3 C4 sing Y N 80
DC OP3 P sing N N 81
DC OP3 HOP3 sing N N 82
DC P OP1 doub N N 83
DC P OP2 sing N N 84
DC P "O5'" sing N N 85
DC OP2 HOP2 sing N N 86
DC "O5'" "C5'" sing N N 87
DC "C5'" "C4'" sing N N 88
DC "C5'" "H5'" sing N N 89
DC "C5'" "H5''" sing N N 90
DC "C4'" "O4'" sing N N 91
DC "C4'" "C3'" sing N N 92
DC "C4'" "H4'" sing N N 93
DC "O4'" "C1'" sing N N 94
DC "C3'" "O3'" sing N N 95
DC "C3'" "C2'" sing N N 96
DC "C3'" "H3'" sing N N 97
DC "O3'" "HO3'" sing N N 98
DC "C2'" "C1'" sing N N 99
DC "C2'" "H2'" sing N N 100
DC "C2'" "H2''" sing N N 101
DC "C1'" N1 sing N N 102
DC "C1'" "H1'" sing N N 103
DC N1 C2 sing N N 104
DC N1 C6 sing N N 105
DC C2 O2 doub N N 106
DC C2 N3 sing N N 107
DC N3 C4 doub N N 108
DC C4 N4 sing N N 109
DC C4 C5 sing N N 110
DC N4 H41 sing N N 111
DC N4 H42 sing N N 112
DC C5 C6 doub N N 113
DC C5 H5 sing N N 114
DC C6 H6 sing N N 115
DG OP3 P sing N N 116
DG OP3 HOP3 sing N N 117
DG P OP1 doub N N 118
DG P OP2 sing N N 119
DG P "O5'" sing N N 120
DG OP2 HOP2 sing N N 121
DG "O5'" "C5'" sing N N 122
DG "C5'" "C4'" sing N N 123
DG "C5'" "H5'" sing N N 124
DG "C5'" "H5''" sing N N 125
DG "C4'" "O4'" sing N N 126
DG "C4'" "C3'" sing N N 127
DG "C4'" "H4'" sing N N 128
DG "O4'" "C1'" sing N N 129
DG "C3'" "O3'" sing N N 130
DG "C3'" "C2'" sing N N 131
DG "C3'" "H3'" sing N N 132
DG "O3'" "HO3'" sing N N 133
DG "C2'" "C1'" sing N N 134
DG "C2'" "H2'" sing N N 135
DG "C2'" "H2''" sing N N 136
DG "C1'" N9 sing N N 137
DG "C1'" "H1'" sing N N 138
DG N9 C8 sing Y N 139
DG N9 C4 sing Y N 140
DG C8 N7 doub Y N 141
DG C8 H8 sing N N 142
DG N7 C5 sing Y N 143
DG C5 C6 sing N N 144
DG C5 C4 doub Y N 145
DG C6 O6 doub N N 146
DG C6 N1 sing N N 147
DG N1 C2 sing N N 148
DG N1 H1 sing N N 149
DG C2 N2 sing N N 150
DG C2 N3 doub N N 151
DG N2 H21 sing N N 152
DG N2 H22 sing N N 153
DG N3 C4 sing N N 154
DT OP3 P sing N N 155
DT OP3 HOP3 sing N N 156
DT P OP1 doub N N 157
DT P OP2 sing N N 158
DT P "O5'" sing N N 159
DT OP2 HOP2 sing N N 160
DT "O5'" "C5'" sing N N 161
DT "C5'" "C4'" sing N N 162
DT "C5'" "H5'" sing N N 163
DT "C5'" "H5''" sing N N 164
DT "C4'" "O4'" sing N N 165
DT "C4'" "C3'" sing N N 166
DT "C4'" "H4'" sing N N 167
DT "O4'" "C1'" sing N N 168
DT "C3'" "O3'" sing N N 169
DT "C3'" "C2'" sing N N 170
DT "C3'" "H3'" sing N N 171
DT "O3'" "HO3'" sing N N 172
DT "C2'" "C1'" sing N N 173
DT "C2'" "H2'" sing N N 174
DT "C2'" "H2''" sing N N 175
DT "C1'" N1 sing N N 176
DT "C1'" "H1'" sing N N 177
DT N1 C2 sing N N 178
DT N1 C6 sing N N 179
DT C2 O2 doub N N 180
DT C2 N3 sing N N 181
DT N3 C4 sing N N 182
DT N3 H3 sing N N 183
DT C4 O4 doub N N 184
DT C4 C5 sing N N 185
DT C5 C7 sing N N 186
DT C5 C6 doub N N 187
DT C7 H71 sing N N 188
DT C7 H72 sing N N 189
DT C7 H73 sing N N 190
DT C6 H6 sing N N 191
HOH O H1 sing N N 192
HOH O H2 sing N N 193
#
_ndb_struct_conf_na.entry_id 274D
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 A DG 10 5_555 -0.762 -0.277 0.320 -11.631 8.590 -8.621 1 A_DC1:DG10_A A 1 ? A 10 ? 19 1
1 A DC 2 1_555 A DG 9 5_555 0.536 -0.078 0.345 -8.525 -6.357 -6.709 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1
1 A DA 3 1_555 A DT 8 5_555 1.436 0.096 -0.269 -0.540 -5.227 -5.394 3 A_DA3:DT8_A A 3 ? A 8 ? 20 1
1 A DA 4 1_555 A DT 7 5_555 -0.277 0.014 0.811 5.524 -7.982 2.350 4 A_DA4:DT7_A A 4 ? A 7 ? 20 1
1 A DC 5 1_555 A DG 6 5_555 -0.511 0.144 -0.401 7.728 -10.656 -3.362 5 A_DC5:DG6_A A 5 ? A 6 ? 19 1
1 A DG 6 1_555 A DC 5 5_555 0.511 0.144 -0.401 -7.728 -10.656 -3.362 6 A_DG6:DC5_A A 6 ? A 5 ? 19 1
1 A DT 7 1_555 A DA 4 5_555 0.277 0.014 0.811 -5.524 -7.982 2.350 7 A_DT7:DA4_A A 7 ? A 4 ? 20 1
1 A DT 8 1_555 A DA 3 5_555 -1.436 0.096 -0.269 0.540 -5.227 -5.394 8 A_DT8:DA3_A A 8 ? A 3 ? 20 1
1 A DG 9 1_555 A DC 2 5_555 -0.536 -0.078 0.345 8.525 -6.357 -6.709 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1
1 A DG 10 1_555 A DC 1 5_555 0.762 -0.277 0.320 11.631 8.590 -8.621 10 A_DG10:DC1_A A 10 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 A DG 10 5_555 A DC 2 1_555 A DG 9 5_555 -0.178 -0.977 3.224 2.628 -3.079 42.156 -1.040 0.513 3.268 -4.269
-3.643 42.341 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2 ? A 9 ?
1 A DC 2 1_555 A DG 9 5_555 A DA 3 1_555 A DT 8 5_555 0.057 0.095 3.305 8.056 1.711 39.174 -0.060 0.853 3.255 2.519
-11.857 39.997 2 AA_DC2DA3:DT8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DA 3 1_555 A DT 8 5_555 A DA 4 1_555 A DT 7 5_555 -0.321 0.311 2.940 -10.831 -6.807 34.764 1.322 -0.818 2.805 -10.945
17.414 36.974 3 AA_DA3DA4:DT7DT8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DA 4 1_555 A DT 7 5_555 A DC 5 1_555 A DG 6 5_555 0.017 -0.153 3.338 9.446 -0.451 33.727 -0.186 1.428 3.228 -0.759
-15.897 34.990 4 AA_DA4DC5:DG6DT7_AA A 4 ? A 7 ? A 5 ? A 6 ?
1 A DC 5 1_555 A DG 6 5_555 A DG 6 1_555 A DC 5 5_555 0.000 0.970 3.975 0.000 5.944 42.436 0.597 0.000 4.068 8.164
0.000 42.831 5 AA_DC5DG6:DC5DG6_AA A 5 ? A 6 ? A 6 ? A 5 ?
1 A DG 6 1_555 A DC 5 5_555 A DT 7 1_555 A DA 4 5_555 -0.017 -0.153 3.338 -9.446 -0.451 33.727 -0.186 -1.428 3.228 -0.759
15.897 34.990 6 AA_DG6DT7:DA4DC5_AA A 6 ? A 5 ? A 7 ? A 4 ?
1 A DT 7 1_555 A DA 4 5_555 A DT 8 1_555 A DA 3 5_555 0.321 0.311 2.940 10.831 -6.807 34.764 1.322 0.818 2.805 -10.945
-17.414 36.974 7 AA_DT7DT8:DA3DA4_AA A 7 ? A 4 ? A 8 ? A 3 ?
1 A DT 8 1_555 A DA 3 5_555 A DG 9 1_555 A DC 2 5_555 -0.057 0.095 3.305 -8.056 1.711 39.174 -0.060 -0.853 3.255 2.519
11.857 39.997 8 AA_DT8DG9:DC2DA3_AA A 8 ? A 3 ? A 9 ? A 2 ?
1 A DG 9 1_555 A DC 2 5_555 A DG 10 1_555 A DC 1 5_555 0.178 -0.977 3.224 -2.628 -3.079 42.156 -1.040 -0.513 3.268 -4.269
3.643 42.341 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ?
#
_atom_sites.entry_id 274D
_atom_sites.fract_transf_matrix[1][1] 0.041754
_atom_sites.fract_transf_matrix[1][2] 0.024106
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.048213
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.011250
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 20.223 -14.664 3.298 1.00 46.19 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 20.660 -14.525 1.831 1.00 28.58 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 20.669 -13.071 1.680 1.00 23.56 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 19.318 -12.627 1.804 1.00 29.49 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 21.265 -12.229 2.827 1.00 22.29 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 22.650 -12.378 2.791 1.00 36.47 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 20.669 -10.860 2.578 1.00 23.43 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 19.554 -11.165 1.778 1.00 27.15 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 18.312 -10.416 1.867 1.00 18.78 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 18.428 -9.078 1.680 1.00 26.65 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 19.532 -8.498 1.662 1.00 32.49 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 17.269 -8.353 1.609 1.00 30.62 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 16.052 -8.958 1.653 1.00 26.28 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 14.914 -8.280 1.636 1.00 18.83 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 15.966 -10.377 1.751 1.00 26.93 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 17.133 -11.053 1.849 1.00 23.01 ? 1 DC A C6 1
ATOM 17 P P . DC A 1 2 ? 23.514 -11.532 3.902 1.00 44.70 ? 2 DC A P 1
ATOM 18 O OP1 . DC A 1 2 ? 24.919 -11.729 3.680 1.00 41.71 ? 2 DC A OP1 1
ATOM 19 O OP2 . DC A 1 2 ? 22.919 -11.883 5.280 1.00 51.30 ? 2 DC A OP2 1
ATOM 20 O "O5'" . DC A 1 2 ? 22.972 -10.086 3.609 1.00 36.59 ? 2 DC A "O5'" 1
ATOM 21 C "C5'" . DC A 1 2 ? 23.780 -9.093 4.267 1.00 28.93 ? 2 DC A "C5'" 1
ATOM 22 C "C4'" . DC A 1 2 ? 23.512 -7.778 3.662 1.00 15.49 ? 2 DC A "C4'" 1
ATOM 23 O "O4'" . DC A 1 2 ? 22.153 -7.627 3.360 1.00 28.69 ? 2 DC A "O4'" 1
ATOM 24 C "C3'" . DC A 1 2 ? 23.819 -6.768 4.738 1.00 20.68 ? 2 DC A "C3'" 1
ATOM 25 O "O3'" . DC A 1 2 ? 24.545 -5.714 4.178 1.00 22.69 ? 2 DC A "O3'" 1
ATOM 26 C "C2'" . DC A 1 2 ? 22.429 -6.430 5.245 1.00 26.25 ? 2 DC A "C2'" 1
ATOM 27 C "C1'" . DC A 1 2 ? 21.538 -6.571 4.080 1.00 22.64 ? 2 DC A "C1'" 1
ATOM 28 N N1 . DC A 1 2 ? 20.128 -6.886 4.364 1.00 26.63 ? 2 DC A N1 1
ATOM 29 C C2 . DC A 1 2 ? 19.250 -5.843 4.204 1.00 26.11 ? 2 DC A C2 1
ATOM 30 O O2 . DC A 1 2 ? 19.694 -4.700 3.796 1.00 28.53 ? 2 DC A O2 1
ATOM 31 N N3 . DC A 1 2 ? 17.917 -6.032 4.498 1.00 20.80 ? 2 DC A N3 1
ATOM 32 C C4 . DC A 1 2 ? 17.486 -7.259 4.853 1.00 20.46 ? 2 DC A C4 1
ATOM 33 N N4 . DC A 1 2 ? 16.154 -7.396 5.093 1.00 23.51 ? 2 DC A N4 1
ATOM 34 C C5 . DC A 1 2 ? 18.360 -8.321 5.049 1.00 23.54 ? 2 DC A C5 1
ATOM 35 C C6 . DC A 1 2 ? 19.652 -8.099 4.782 1.00 28.79 ? 2 DC A C6 1
ATOM 36 P P . DA A 1 3 ? 25.377 -4.920 5.351 1.00 30.82 ? 3 DA A P 1
ATOM 37 O OP1 . DA A 1 3 ? 26.496 -4.202 4.693 1.00 34.00 ? 3 DA A OP1 1
ATOM 38 O OP2 . DA A 1 3 ? 25.823 -5.903 6.302 1.00 29.60 ? 3 DA A OP2 1
ATOM 39 O "O5'" . DA A 1 3 ? 24.286 -3.794 5.636 1.00 27.70 ? 3 DA A "O5'" 1
ATOM 40 C "C5'" . DA A 1 3 ? 24.486 -2.468 5.173 1.00 22.31 ? 3 DA A "C5'" 1
ATOM 41 C "C4'" . DA A 1 3 ? 23.385 -1.585 5.645 1.00 14.22 ? 3 DA A "C4'" 1
ATOM 42 O "O4'" . DA A 1 3 ? 22.126 -2.246 5.769 1.00 19.39 ? 3 DA A "O4'" 1
ATOM 43 C "C3'" . DA A 1 3 ? 23.521 -0.962 6.969 1.00 21.92 ? 3 DA A "C3'" 1
ATOM 44 O "O3'" . DA A 1 3 ? 22.751 0.251 6.809 1.00 29.48 ? 3 DA A "O3'" 1
ATOM 45 C "C2'" . DA A 1 3 ? 22.758 -1.935 7.893 1.00 29.93 ? 3 DA A "C2'" 1
ATOM 46 C "C1'" . DA A 1 3 ? 21.524 -2.128 7.067 1.00 21.83 ? 3 DA A "C1'" 1
ATOM 47 N N9 . DA A 1 3 ? 20.759 -3.312 7.476 1.00 17.62 ? 3 DA A N9 1
ATOM 48 C C8 . DA A 1 3 ? 21.110 -4.526 7.920 1.00 12.38 ? 3 DA A C8 1
ATOM 49 N N7 . DA A 1 3 ? 20.055 -5.353 8.125 1.00 19.49 ? 3 DA A N7 1
ATOM 50 C C5 . DA A 1 3 ? 18.948 -4.586 7.742 1.00 15.69 ? 3 DA A C5 1
ATOM 51 C C6 . DA A 1 3 ? 17.585 -4.860 7.716 1.00 22.72 ? 3 DA A C6 1
ATOM 52 N N6 . DA A 1 3 ? 16.958 -5.996 8.107 1.00 26.18 ? 3 DA A N6 1
ATOM 53 N N1 . DA A 1 3 ? 16.716 -3.827 7.298 1.00 22.46 ? 3 DA A N1 1
ATOM 54 C C2 . DA A 1 3 ? 17.290 -2.647 6.933 1.00 22.13 ? 3 DA A C2 1
ATOM 55 N N3 . DA A 1 3 ? 18.592 -2.335 6.916 1.00 25.50 ? 3 DA A N3 1
ATOM 56 C C4 . DA A 1 3 ? 19.366 -3.356 7.351 1.00 16.14 ? 3 DA A C4 1
ATOM 57 P P . DA A 1 4 ? 23.796 1.475 6.951 1.00 39.92 ? 4 DA A P 1
ATOM 58 O OP1 . DA A 1 4 ? 24.588 1.147 5.760 1.00 43.84 ? 4 DA A OP1 1
ATOM 59 O OP2 . DA A 1 4 ? 24.605 1.188 8.205 1.00 41.88 ? 4 DA A OP2 1
ATOM 60 O "O5'" . DA A 1 4 ? 22.888 2.752 6.960 1.00 32.91 ? 4 DA A "O5'" 1
ATOM 61 C "C5'" . DA A 1 4 ? 22.194 3.265 5.840 1.00 36.20 ? 4 DA A "C5'" 1
ATOM 62 C "C4'" . DA A 1 4 ? 20.735 3.512 6.151 1.00 28.97 ? 4 DA A "C4'" 1
ATOM 63 O "O4'" . DA A 1 4 ? 20.153 2.354 6.711 1.00 36.81 ? 4 DA A "O4'" 1
ATOM 64 C "C3'" . DA A 1 4 ? 20.379 4.534 7.156 1.00 31.17 ? 4 DA A "C3'" 1
ATOM 65 O "O3'" . DA A 1 4 ? 19.216 5.208 6.711 1.00 39.18 ? 4 DA A "O3'" 1
ATOM 66 C "C2'" . DA A 1 4 ? 20.095 3.669 8.427 1.00 32.81 ? 4 DA A "C2'" 1
ATOM 67 C "C1'" . DA A 1 4 ? 19.226 2.562 7.867 1.00 23.64 ? 4 DA A "C1'" 1
ATOM 68 N N9 . DA A 1 4 ? 19.141 1.311 8.596 1.00 18.26 ? 4 DA A N9 1
ATOM 69 C C8 . DA A 1 4 ? 20.226 0.568 9.005 1.00 19.30 ? 4 DA A C8 1
ATOM 70 N N7 . DA A 1 4 ? 19.899 -0.562 9.600 1.00 24.32 ? 4 DA A N7 1
ATOM 71 C C5 . DA A 1 4 ? 18.489 -0.564 9.591 1.00 17.51 ? 4 DA A C5 1
ATOM 72 C C6 . DA A 1 4 ? 17.618 -1.502 10.089 1.00 19.97 ? 4 DA A C6 1
ATOM 73 N N6 . DA A 1 4 ? 17.826 -2.705 10.720 1.00 26.15 ? 4 DA A N6 1
ATOM 74 N N1 . DA A 1 4 ? 16.296 -1.249 9.849 1.00 21.14 ? 4 DA A N1 1
ATOM 75 C C2 . DA A 1 4 ? 15.784 -0.139 9.271 1.00 21.26 ? 4 DA A C2 1
ATOM 76 N N3 . DA A 1 4 ? 16.748 0.821 8.809 1.00 26.06 ? 4 DA A N3 1
ATOM 77 C C4 . DA A 1 4 ? 18.028 0.529 8.960 1.00 19.88 ? 4 DA A C4 1
ATOM 78 P P . DC A 1 5 ? 18.936 6.735 7.200 1.00 43.40 ? 5 DC A P 1
ATOM 79 O OP1 . DC A 1 5 ? 18.949 7.376 5.849 1.00 45.99 ? 5 DC A OP1 1
ATOM 80 O OP2 . DC A 1 5 ? 20.119 7.112 8.071 1.00 45.15 ? 5 DC A OP2 1
ATOM 81 O "O5'" . DC A 1 5 ? 17.491 6.795 7.867 1.00 32.35 ? 5 DC A "O5'" 1
ATOM 82 C "C5'" . DC A 1 5 ? 16.966 5.521 8.311 1.00 32.02 ? 5 DC A "C5'" 1
ATOM 83 C "C4'" . DC A 1 5 ? 15.697 5.708 9.005 1.00 33.25 ? 5 DC A "C4'" 1
ATOM 84 O "O4'" . DC A 1 5 ? 15.294 4.493 9.742 1.00 36.19 ? 5 DC A "O4'" 1
ATOM 85 C "C3'" . DC A 1 5 ? 15.552 6.735 10.116 1.00 36.23 ? 5 DC A "C3'" 1
ATOM 86 O "O3'" . DC A 1 5 ? 14.162 6.861 10.453 1.00 37.80 ? 5 DC A "O3'" 1
ATOM 87 C "C2'" . DC A 1 5 ? 16.355 5.982 11.191 1.00 34.12 ? 5 DC A "C2'" 1
ATOM 88 C "C1'" . DC A 1 5 ? 15.708 4.586 11.058 1.00 28.85 ? 5 DC A "C1'" 1
ATOM 89 N N1 . DC A 1 5 ? 16.565 3.474 11.511 1.00 28.43 ? 5 DC A N1 1
ATOM 90 C C2 . DC A 1 5 ? 15.875 2.304 11.751 1.00 32.17 ? 5 DC A C2 1
ATOM 91 O O2 . DC A 1 5 ? 14.618 2.172 11.573 1.00 38.07 ? 5 DC A O2 1
ATOM 92 N N3 . DC A 1 5 ? 16.555 1.180 12.249 1.00 29.85 ? 5 DC A N3 1
ATOM 93 C C4 . DC A 1 5 ? 17.895 1.278 12.436 1.00 26.24 ? 5 DC A C4 1
ATOM 94 N N4 . DC A 1 5 ? 18.463 0.133 12.907 1.00 30.62 ? 5 DC A N4 1
ATOM 95 C C5 . DC A 1 5 ? 18.609 2.452 12.178 1.00 22.92 ? 5 DC A C5 1
ATOM 96 C C6 . DC A 1 5 ? 17.907 3.501 11.742 1.00 27.31 ? 5 DC A C6 1
ATOM 97 P P . DG A 1 6 ? 13.704 8.259 11.025 1.00 47.49 ? 6 DG A P 1
ATOM 98 O OP1 . DG A 1 6 ? 13.114 8.643 9.772 1.00 44.13 ? 6 DG A OP1 1
ATOM 99 O OP2 . DG A 1 6 ? 14.874 8.996 11.594 1.00 36.79 ? 6 DG A OP2 1
ATOM 100 O "O5'" . DG A 1 6 ? 12.635 7.734 12.127 1.00 42.71 ? 6 DG A "O5'" 1
ATOM 101 C "C5'" . DG A 1 6 ? 11.648 6.863 11.478 1.00 45.50 ? 6 DG A "C5'" 1
ATOM 102 C "C4'" . DG A 1 6 ? 11.155 5.938 12.536 1.00 41.84 ? 6 DG A "C4'" 1
ATOM 103 O "O4'" . DG A 1 6 ? 12.119 5.048 12.981 1.00 51.05 ? 6 DG A "O4'" 1
ATOM 104 C "C3'" . DG A 1 6 ? 10.683 6.635 13.825 1.00 49.18 ? 6 DG A "C3'" 1
ATOM 105 O "O3'" . DG A 1 6 ? 9.531 5.868 14.252 1.00 48.23 ? 6 DG A "O3'" 1
ATOM 106 C "C2'" . DG A 1 6 ? 11.904 6.552 14.741 1.00 45.13 ? 6 DG A "C2'" 1
ATOM 107 C "C1'" . DG A 1 6 ? 12.290 5.113 14.474 1.00 41.38 ? 6 DG A "C1'" 1
ATOM 108 N N9 . DG A 1 6 ? 13.684 4.764 14.750 1.00 32.53 ? 6 DG A N9 1
ATOM 109 C C8 . DG A 1 6 ? 14.786 5.565 14.510 1.00 28.60 ? 6 DG A C8 1
ATOM 110 N N7 . DG A 1 6 ? 15.910 4.953 14.794 1.00 31.63 ? 6 DG A N7 1
ATOM 111 C C5 . DG A 1 6 ? 15.522 3.684 15.247 1.00 27.26 ? 6 DG A C5 1
ATOM 112 C C6 . DG A 1 6 ? 16.278 2.607 15.727 1.00 32.05 ? 6 DG A C6 1
ATOM 113 O O6 . DG A 1 6 ? 17.534 2.543 15.843 1.00 35.88 ? 6 DG A O6 1
ATOM 114 N N1 . DG A 1 6 ? 15.575 1.468 16.145 1.00 27.53 ? 6 DG A N1 1
ATOM 115 C C2 . DG A 1 6 ? 14.204 1.487 16.021 1.00 27.97 ? 6 DG A C2 1
ATOM 116 N N2 . DG A 1 6 ? 13.711 0.295 16.438 1.00 31.57 ? 6 DG A N2 1
ATOM 117 N N3 . DG A 1 6 ? 13.430 2.479 15.585 1.00 34.59 ? 6 DG A N3 1
ATOM 118 C C4 . DG A 1 6 ? 14.168 3.557 15.221 1.00 30.29 ? 6 DG A C4 1
ATOM 119 P P . DT A 1 7 ? 8.627 6.376 15.461 1.00 54.18 ? 7 DT A P 1
ATOM 120 O OP1 . DT A 1 7 ? 7.430 7.075 14.892 1.00 42.44 ? 7 DT A OP1 1
ATOM 121 O OP2 . DT A 1 7 ? 9.517 7.291 16.305 1.00 48.92 ? 7 DT A OP2 1
ATOM 122 O "O5'" . DT A 1 7 ? 8.295 4.984 16.225 1.00 49.75 ? 7 DT A "O5'" 1
ATOM 123 C "C5'" . DT A 1 7 ? 9.077 3.800 16.163 1.00 45.73 ? 7 DT A "C5'" 1
ATOM 124 C "C4'" . DT A 1 7 ? 8.828 2.866 17.292 1.00 43.92 ? 7 DT A "C4'" 1
ATOM 125 O "O4'" . DT A 1 7 ? 9.968 2.223 17.905 1.00 40.40 ? 7 DT A "O4'" 1
ATOM 126 C "C3'" . DT A 1 7 ? 8.186 3.509 18.572 1.00 43.96 ? 7 DT A "C3'" 1
ATOM 127 O "O3'" . DT A 1 7 ? 7.520 2.443 19.230 1.00 49.61 ? 7 DT A "O3'" 1
ATOM 128 C "C2'" . DT A 1 7 ? 9.439 4.144 19.114 1.00 42.58 ? 7 DT A "C2'" 1
ATOM 129 C "C1'" . DT A 1 7 ? 10.564 3.024 18.927 1.00 37.24 ? 7 DT A "C1'" 1
ATOM 130 N N1 . DT A 1 7 ? 11.892 3.628 18.812 1.00 32.29 ? 7 DT A N1 1
ATOM 131 C C2 . DT A 1 7 ? 12.959 2.900 19.327 1.00 32.61 ? 7 DT A C2 1
ATOM 132 O O2 . DT A 1 7 ? 12.979 1.713 19.825 1.00 34.47 ? 7 DT A O2 1
ATOM 133 N N3 . DT A 1 7 ? 14.231 3.439 19.247 1.00 31.66 ? 7 DT A N3 1
ATOM 134 C C4 . DT A 1 7 ? 14.459 4.692 18.714 1.00 30.60 ? 7 DT A C4 1
ATOM 135 O O4 . DT A 1 7 ? 15.739 5.001 18.678 1.00 33.46 ? 7 DT A O4 1
ATOM 136 C C5 . DT A 1 7 ? 13.386 5.409 18.225 1.00 27.78 ? 7 DT A C5 1
ATOM 137 C C7 . DT A 1 7 ? 13.611 6.762 17.621 1.00 35.36 ? 7 DT A C7 1
ATOM 138 C C6 . DT A 1 7 ? 12.182 4.868 18.287 1.00 31.39 ? 7 DT A C6 1
ATOM 139 P P . DT A 1 8 ? 6.734 2.313 20.581 1.00 56.87 ? 8 DT A P 1
ATOM 140 O OP1 . DT A 1 8 ? 5.552 1.373 20.465 1.00 54.78 ? 8 DT A OP1 1
ATOM 141 O OP2 . DT A 1 8 ? 6.298 3.698 21.061 1.00 51.07 ? 8 DT A OP2 1
ATOM 142 O "O5'" . DT A 1 8 ? 7.759 1.471 21.487 1.00 51.90 ? 8 DT A "O5'" 1
ATOM 143 C "C5'" . DT A 1 8 ? 8.417 0.313 20.892 1.00 48.00 ? 8 DT A "C5'" 1
ATOM 144 C "C4'" . DT A 1 8 ? 9.240 -0.377 21.914 1.00 50.13 ? 8 DT A "C4'" 1
ATOM 145 O "O4'" . DT A 1 8 ? 10.595 0.037 22.145 1.00 51.35 ? 8 DT A "O4'" 1
ATOM 146 C "C3'" . DT A 1 8 ? 8.671 -0.251 23.372 1.00 51.96 ? 8 DT A "C3'" 1
ATOM 147 O "O3'" . DT A 1 8 ? 9.118 -1.464 23.994 1.00 53.47 ? 8 DT A "O3'" 1
ATOM 148 C "C2'" . DT A 1 8 ? 9.233 1.137 23.754 1.00 47.16 ? 8 DT A "C2'" 1
ATOM 149 C "C1'" . DT A 1 8 ? 10.671 0.973 23.319 1.00 42.25 ? 8 DT A "C1'" 1
ATOM 150 N N1 . DT A 1 8 ? 11.482 2.153 22.990 1.00 35.86 ? 8 DT A N1 1
ATOM 151 C C2 . DT A 1 8 ? 12.861 1.892 22.910 1.00 38.04 ? 8 DT A C2 1
ATOM 152 O O2 . DT A 1 8 ? 13.281 0.711 23.150 1.00 37.94 ? 8 DT A O2 1
ATOM 153 N N3 . DT A 1 8 ? 13.750 2.941 22.572 1.00 37.35 ? 8 DT A N3 1
ATOM 154 C C4 . DT A 1 8 ? 13.237 4.181 22.314 1.00 37.57 ? 8 DT A C4 1
ATOM 155 O O4 . DT A 1 8 ? 14.119 5.094 22.012 1.00 32.74 ? 8 DT A O4 1
ATOM 156 C C5 . DT A 1 8 ? 11.811 4.420 22.376 1.00 33.68 ? 8 DT A C5 1
ATOM 157 C C7 . DT A 1 8 ? 11.292 5.791 22.092 1.00 31.61 ? 8 DT A C7 1
ATOM 158 C C6 . DT A 1 8 ? 11.037 3.408 22.714 1.00 32.31 ? 8 DT A C6 1
ATOM 159 P P . DG A 1 9 ? 9.289 -1.529 25.630 1.00 53.46 ? 9 DG A P 1
ATOM 160 O OP1 . DG A 1 9 ? 9.628 -2.904 25.932 1.00 46.73 ? 9 DG A OP1 1
ATOM 161 O OP2 . DG A 1 9 ? 8.179 -0.680 26.154 1.00 49.54 ? 9 DG A OP2 1
ATOM 162 O "O5'" . DG A 1 9 ? 10.700 -0.624 25.719 1.00 58.18 ? 9 DG A "O5'" 1
ATOM 163 C "C5'" . DG A 1 9 ? 11.713 -1.350 24.963 1.00 54.77 ? 9 DG A "C5'" 1
ATOM 164 C "C4'" . DG A 1 9 ? 12.502 -2.091 25.994 1.00 49.88 ? 9 DG A "C4'" 1
ATOM 165 O "O4'" . DG A 1 9 ? 13.628 -1.191 26.119 1.00 46.48 ? 9 DG A "O4'" 1
ATOM 166 C "C3'" . DG A 1 9 ? 12.098 -2.304 27.434 1.00 45.29 ? 9 DG A "C3'" 1
ATOM 167 O "O3'" . DG A 1 9 ? 13.076 -3.122 28.030 1.00 48.11 ? 9 DG A "O3'" 1
ATOM 168 C "C2'" . DG A 1 9 ? 12.143 -0.863 27.959 1.00 40.31 ? 9 DG A "C2'" 1
ATOM 169 C "C1'" . DG A 1 9 ? 13.394 -0.425 27.265 1.00 35.58 ? 9 DG A "C1'" 1
ATOM 170 N N9 . DG A 1 9 ? 13.285 0.962 26.785 1.00 29.39 ? 9 DG A N9 1
ATOM 171 C C8 . DG A 1 9 ? 12.249 1.753 26.599 1.00 27.62 ? 9 DG A C8 1
ATOM 172 N N7 . DG A 1 9 ? 12.574 2.958 26.243 1.00 36.11 ? 9 DG A N7 1
ATOM 173 C C5 . DG A 1 9 ? 13.974 2.947 26.199 1.00 31.04 ? 9 DG A C5 1
ATOM 174 C C6 . DG A 1 9 ? 14.889 3.964 25.870 1.00 34.01 ? 9 DG A C6 1
ATOM 175 O O6 . DG A 1 9 ? 14.704 5.142 25.487 1.00 42.59 ? 9 DG A O6 1
ATOM 176 N N1 . DG A 1 9 ? 16.221 3.588 25.914 1.00 33.65 ? 9 DG A N1 1
ATOM 177 C C2 . DG A 1 9 ? 16.571 2.294 26.279 1.00 27.36 ? 9 DG A C2 1
ATOM 178 N N2 . DG A 1 9 ? 17.886 2.257 26.216 1.00 26.32 ? 9 DG A N2 1
ATOM 179 N N3 . DG A 1 9 ? 15.757 1.340 26.581 1.00 29.59 ? 9 DG A N3 1
ATOM 180 C C4 . DG A 1 9 ? 14.448 1.711 26.519 1.00 31.30 ? 9 DG A C4 1
ATOM 181 P P . DG A 1 10 ? 13.741 -3.275 29.461 1.00 56.44 ? 10 DG A P 1
ATOM 182 O OP1 . DG A 1 10 ? 14.479 -4.602 29.363 1.00 49.58 ? 10 DG A OP1 1
ATOM 183 O OP2 . DG A 1 10 ? 12.697 -3.287 30.572 1.00 48.34 ? 10 DG A OP2 1
ATOM 184 O "O5'" . DG A 1 10 ? 14.794 -2.020 29.505 1.00 48.16 ? 10 DG A "O5'" 1
ATOM 185 C "C5'" . DG A 1 10 ? 16.232 -2.470 29.470 1.00 35.92 ? 10 DG A "C5'" 1
ATOM 186 C "C4'" . DG A 1 10 ? 17.195 -1.371 29.763 1.00 24.13 ? 10 DG A "C4'" 1
ATOM 187 O "O4'" . DG A 1 10 ? 16.699 -0.135 29.354 1.00 27.18 ? 10 DG A "O4'" 1
ATOM 188 C "C3'" . DG A 1 10 ? 17.554 -1.122 31.230 1.00 27.41 ? 10 DG A "C3'" 1
ATOM 189 O "O3'" . DG A 1 10 ? 18.929 -0.848 31.381 1.00 37.64 ? 10 DG A "O3'" 1
ATOM 190 C "C2'" . DG A 1 10 ? 16.631 0.087 31.514 1.00 24.85 ? 10 DG A "C2'" 1
ATOM 191 C "C1'" . DG A 1 10 ? 17.012 0.917 30.359 1.00 22.81 ? 10 DG A "C1'" 1
ATOM 192 N N9 . DG A 1 10 ? 16.145 2.008 29.994 1.00 18.91 ? 10 DG A N9 1
ATOM 193 C C8 . DG A 1 10 ? 14.772 1.892 29.870 1.00 25.83 ? 10 DG A C8 1
ATOM 194 N N7 . DG A 1 10 ? 14.156 2.976 29.461 1.00 26.02 ? 10 DG A N7 1
ATOM 195 C C5 . DG A 1 10 ? 15.236 3.856 29.265 1.00 23.00 ? 10 DG A C5 1
ATOM 196 C C6 . DG A 1 10 ? 15.253 5.216 28.821 1.00 25.72 ? 10 DG A C6 1
ATOM 197 O O6 . DG A 1 10 ? 14.194 5.785 28.554 1.00 29.96 ? 10 DG A O6 1
ATOM 198 N N1 . DG A 1 10 ? 16.466 5.803 28.759 1.00 20.19 ? 10 DG A N1 1
ATOM 199 C C2 . DG A 1 10 ? 17.606 5.086 29.087 1.00 24.47 ? 10 DG A C2 1
ATOM 200 N N2 . DG A 1 10 ? 18.776 5.822 28.999 1.00 25.76 ? 10 DG A N2 1
ATOM 201 N N3 . DG A 1 10 ? 17.667 3.810 29.505 1.00 23.55 ? 10 DG A N3 1
ATOM 202 C C4 . DG A 1 10 ? 16.448 3.263 29.567 1.00 24.17 ? 10 DG A C4 1
HETATM 203 C C1 . ANT B 2 . ? 17.704 -0.286 24.981 1.00 27.98 ? 11 ANT A C1 1
HETATM 204 C C2 . ANT B 2 . ? 17.699 -1.804 25.221 1.00 31.41 ? 11 ANT A C2 1
HETATM 205 C C3 . ANT B 2 . ? 18.568 -2.132 26.199 1.00 31.78 ? 11 ANT A C3 1
HETATM 206 N N4 . ANT B 2 . ? 19.348 -0.998 26.625 1.00 25.44 ? 11 ANT A N4 1
HETATM 207 C C5 . ANT B 2 . ? 20.593 -1.222 27.132 1.00 19.68 ? 11 ANT A C5 1
HETATM 208 O O5 . ANT B 2 . ? 20.785 -2.396 27.576 1.00 23.16 ? 11 ANT A O5 1
HETATM 209 C C5A . ANT B 2 . ? 21.494 -0.064 27.390 1.00 23.26 ? 11 ANT A C5A 1
HETATM 210 C C6 . ANT B 2 . ? 22.885 -0.346 27.532 1.00 29.82 ? 11 ANT A C6 1
HETATM 211 C C7 . ANT B 2 . ? 23.872 0.645 27.772 1.00 24.21 ? 11 ANT A C7 1
HETATM 212 C C8 . ANT B 2 . ? 23.435 2.012 27.896 1.00 19.10 ? 11 ANT A C8 1
HETATM 213 C C8M . ANT B 2 . ? 24.492 3.084 28.136 1.00 22.26 ? 11 ANT A C8M 1
HETATM 214 C C9 . ANT B 2 . ? 22.123 2.340 27.790 1.00 21.51 ? 11 ANT A C9 1
HETATM 215 C C9A . ANT B 2 . ? 21.124 1.319 27.514 1.00 25.79 ? 11 ANT A C9A 1
HETATM 216 O O9 . ANT B 2 . ? 21.692 3.642 27.896 1.00 25.05 ? 11 ANT A O9 1
HETATM 217 N N10 . ANT B 2 . ? 19.840 1.697 27.399 1.00 29.02 ? 11 ANT A N10 1
HETATM 218 C C11 . ANT B 2 . ? 18.776 1.317 26.563 1.00 27.55 ? 11 ANT A C11 1
HETATM 219 C C4A . ANT B 2 . ? 19.046 0.147 25.656 1.00 26.16 ? 11 ANT A C4A 1
HETATM 220 C C12 . ANT B 2 . ? 16.555 -2.727 24.927 1.00 34.66 ? 11 ANT A C12 1
HETATM 221 C C13 . ANT B 2 . ? 15.447 -2.134 24.385 1.00 42.45 ? 11 ANT A C13 1
HETATM 222 C C14 . ANT B 2 . ? 14.326 -2.914 23.807 1.00 45.63 ? 11 ANT A C14 1
HETATM 223 O O14 . ANT B 2 . ? 14.116 -4.119 24.163 1.00 41.96 ? 11 ANT A O14 1
HETATM 224 N N15 . ANT B 2 . ? 13.604 -2.103 22.972 1.00 42.83 ? 11 ANT A N15 1
HETATM 225 O O . HOH C 3 . ? 19.694 5.870 14.187 1.00 49.64 ? 12 HOH A O 1
HETATM 226 O O . HOH C 3 . ? 27.147 1.340 8.776 1.00 39.47 ? 13 HOH A O 1
HETATM 227 O O . HOH C 3 . ? 21.629 12.038 22.880 1.00 44.80 ? 14 HOH A O 1
HETATM 228 O O . HOH C 3 . ? 17.158 11.009 22.774 1.00 48.62 ? 15 HOH A O 1
HETATM 229 O O . HOH C 3 . ? 7.124 4.802 23.840 1.00 51.10 ? 16 HOH A O 1
HETATM 230 O O . HOH C 3 . ? 4.537 -0.023 24.987 1.00 50.94 ? 17 HOH A O 1
HETATM 231 O O . HOH C 3 . ? 12.518 -5.945 32.246 1.00 34.79 ? 18 HOH A O 1
HETATM 232 O O . HOH C 3 . ? 26.207 -2.989 11.271 1.00 38.26 ? 19 HOH A O 1
HETATM 233 O O . HOH C 3 . ? 13.660 13.185 24.934 1.00 51.83 ? 20 HOH A O 1
HETATM 234 O O . HOH C 3 . ? 12.196 -3.941 34.291 1.00 59.00 ? 21 HOH A O 1
HETATM 235 O O . HOH C 3 . ? 11.074 -3.182 18.462 1.00 48.46 ? 22 HOH A O 1
HETATM 236 O O . HOH C 3 . ? 25.868 6.853 13.707 1.00 43.04 ? 23 HOH A O 1
HETATM 237 O O . HOH C 3 . ? 28.667 4.636 11.458 1.00 51.47 ? 24 HOH A O 1
HETATM 238 O O . HOH C 3 . ? 21.883 -2.941 12.062 1.00 45.25 ? 25 HOH A O 1
HETATM 239 O O . HOH C 3 . ? 12.524 -1.004 32.172 1.00 38.90 ? 26 HOH A O 1
HETATM 240 O O . HOH C 3 . ? 8.505 -2.883 17.280 1.00 57.68 ? 27 HOH A O 1
HETATM 241 O O . HOH C 3 . ? 10.387 -0.514 15.719 0.50 28.61 ? 28 HOH A O 1
HETATM 242 O O . HOH C 3 . ? 14.594 -6.507 27.414 1.00 51.68 ? 29 HOH A O 1
HETATM 243 O O . HOH C 3 . ? 15.328 9.234 20.116 1.00 60.06 ? 30 HOH A O 1
HETATM 244 O O . HOH C 3 . ? 24.334 -1.404 12.338 1.00 50.41 ? 31 HOH A O 1
HETATM 245 O O . HOH C 3 . ? 11.140 -3.192 21.671 1.00 56.85 ? 32 HOH A O 1
HETATM 246 O O . HOH C 3 . ? 9.731 -3.538 30.504 1.00 39.24 ? 33 HOH A O 1
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