HEADER DNA/RNA 02-FEB-96 248D
TITLE CRYSTAL STRUCTURES OF AN A-FORM DUPLEX WITH SINGLE-ADENOSINE BULGES
TITLE 2 AND A CONFORMATIONAL BASIS FOR SITE SPECIFIC RNA SELF-CLEAVAGE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA/RNA (5'-R(*GP*CP*GP*)-D(*AP*TP*AP*TP*AP*)-R(*CP*GP*C)-
COMPND 3 3'), ORTHORHOMBIC;
COMPND 4 CHAIN: A;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS A-DNA/RNA, DOUBLE HELIX, BULGES, DNA-RNA COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR S.PORTMANN,S.GRIMM,C.WORKMAN,N.USMAN,M.EGLI
REVDAT 5 14-FEB-24 248D 1 REMARK
REVDAT 4 16-NOV-11 248D 1 VERSN HETATM
REVDAT 3 24-FEB-09 248D 1 VERSN
REVDAT 2 01-APR-03 248D 1 JRNL
REVDAT 1 08-MAR-96 248D 0
JRNL AUTH S.PORTMANN,S.GRIMM,C.WORKMAN,N.USMAN,M.EGLI
JRNL TITL CRYSTAL STRUCTURES OF AN A-FORM DUPLEX WITH SINGLE-ADENOSINE
JRNL TITL 2 BULGES AND A CONFORMATIONAL BASIS FOR SITE-SPECIFIC RNA
JRNL TITL 3 SELF-CLEAVAGE.
JRNL REF CHEM.BIOL. V. 3 173 1996
JRNL REFN ISSN 1074-5521
JRNL PMID 8807843
JRNL DOI 10.1016/S1074-5521(96)90260-4
REMARK 2
REMARK 2 RESOLUTION. 1.83 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 2170
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING SET) : 0.159
REMARK 3 FREE R VALUE : 0.236
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 229
REMARK 3 HETEROGEN ATOMS : 28
REMARK 3 SOLVENT ATOMS : 38
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.013
REMARK 3 BOND ANGLES (DEGREES) : 3.280
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 248D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000177647.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 09-NOV-95
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 7.40
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : NULL
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2264
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800
REMARK 200 RESOLUTION RANGE LOW (A) : 28.780
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : 0.08100
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: NULL
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 32.86
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.83
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.40, VAPOR DIFFUSION
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -X,Y,-Z+1/2
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.78000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.78000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 12.94500
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 16.98500
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 12.94500
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 16.98500
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.78000
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 12.94500
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 16.98500
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 28.78000
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 12.94500
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 16.98500
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 14 LIES ON A SPECIAL POSITION.
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DA A 4 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES
REMARK 500 DT A 5 C4' - C3' - C2' ANGL. DEV. = -5.8 DEGREES
REMARK 500 DT A 5 O4' - C1' - N1 ANGL. DEV. = 5.7 DEGREES
REMARK 500 DT A 5 N3 - C2 - O2 ANGL. DEV. = -3.7 DEGREES
REMARK 500 DA A 6 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES
REMARK 500 DT A 7 C5' - C4' - O4' ANGL. DEV. = 8.1 DEGREES
REMARK 500 DT A 7 N3 - C2 - O2 ANGL. DEV. = -3.8 DEGREES
REMARK 500 DA A 8 O5' - C5' - C4' ANGL. DEV. = -4.9 DEGREES
REMARK 500 DA A 8 O4' - C1' - N9 ANGL. DEV. = 4.5 DEGREES
REMARK 500 C A 9 N1 - C2 - O2 ANGL. DEV. = 4.4 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPM A 12
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPM A 13
DBREF 248D A 1 11 PDB 248D 248D 1 11
SEQRES 1 A 11 G C G DA DT DA DT DA C G C
HET SPM A 12 14
HET SPM A 13 14
HETNAM SPM SPERMINE
FORMUL 2 SPM 2(C10 H26 N4)
FORMUL 4 HOH *38(H2 O)
SITE 1 AC1 5 G A 1 DA A 8 C A 9 G A 10
SITE 2 AC1 5 C A 11
SITE 1 AC2 9 C A 2 G A 3 DT A 5 DA A 6
SITE 2 AC2 9 DT A 7 DA A 8 HOH A 18 HOH A 28
SITE 3 AC2 9 HOH A 31
CRYST1 25.890 33.970 57.560 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.038625 0.000000 0.000000 0.00000
SCALE2 0.000000 0.029438 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017373 0.00000
ATOM 1 O5' G A 1 13.247 3.145 11.199 1.00 15.29 O
ATOM 2 C5' G A 1 14.640 3.265 11.534 1.00 14.21 C
ATOM 3 C4' G A 1 15.422 1.965 11.719 1.00 11.99 C
ATOM 4 O4' G A 1 15.067 1.274 12.923 1.00 11.15 O
ATOM 5 C3' G A 1 15.210 0.983 10.558 1.00 12.55 C
ATOM 6 O3' G A 1 16.177 1.144 9.537 1.00 10.88 O
ATOM 7 C2' G A 1 15.438 -0.348 11.224 1.00 11.72 C
ATOM 8 O2' G A 1 16.798 -0.547 11.489 1.00 13.36 O
ATOM 9 C1' G A 1 14.826 -0.111 12.579 1.00 11.35 C
ATOM 10 N9 G A 1 13.381 -0.451 12.683 1.00 11.68 N
ATOM 11 C8 G A 1 12.344 0.417 12.751 1.00 10.19 C
ATOM 12 N7 G A 1 11.183 -0.135 12.869 1.00 11.49 N
ATOM 13 C5 G A 1 11.461 -1.500 12.906 1.00 11.83 C
ATOM 14 C6 G A 1 10.561 -2.604 13.047 1.00 10.80 C
ATOM 15 O6 G A 1 9.331 -2.546 13.176 1.00 10.76 O
ATOM 16 N1 G A 1 11.242 -3.839 12.983 1.00 11.08 N
ATOM 17 C2 G A 1 12.613 -3.975 12.837 1.00 11.65 C
ATOM 18 N2 G A 1 13.112 -5.192 12.850 1.00 11.29 N
ATOM 19 N3 G A 1 13.458 -2.932 12.724 1.00 12.72 N
ATOM 20 C4 G A 1 12.814 -1.714 12.761 1.00 11.92 C
ATOM 21 P C A 2 15.861 0.852 8.000 1.00 12.33 P
ATOM 22 OP1 C A 2 17.029 1.296 7.211 1.00 13.53 O
ATOM 23 OP2 C A 2 14.525 1.401 7.653 1.00 11.23 O
ATOM 24 O5' C A 2 15.764 -0.744 7.871 1.00 12.92 O
ATOM 25 C5' C A 2 16.912 -1.585 8.041 1.00 11.22 C
ATOM 26 C4' C A 2 16.470 -3.024 8.278 1.00 13.03 C
ATOM 27 O4' C A 2 15.570 -3.096 9.407 1.00 13.80 O
ATOM 28 C3' C A 2 15.590 -3.546 7.138 1.00 14.57 C
ATOM 29 O3' C A 2 16.274 -3.931 5.930 1.00 14.37 O
ATOM 30 C2' C A 2 14.854 -4.703 7.816 1.00 14.16 C
ATOM 31 O2' C A 2 15.748 -5.835 7.960 1.00 15.60 O
ATOM 32 C1' C A 2 14.536 -4.073 9.179 1.00 11.94 C
ATOM 33 N1 C A 2 13.209 -3.435 9.257 1.00 11.44 N
ATOM 34 C2 C A 2 12.086 -4.232 9.488 1.00 11.10 C
ATOM 35 O2 C A 2 12.185 -5.451 9.604 1.00 11.63 O
ATOM 36 N3 C A 2 10.860 -3.619 9.593 1.00 10.76 N
ATOM 37 C4 C A 2 10.737 -2.290 9.492 1.00 8.32 C
ATOM 38 N4 C A 2 9.551 -1.714 9.596 1.00 8.01 N
ATOM 39 C5 C A 2 11.880 -1.472 9.252 1.00 10.51 C
ATOM 40 C6 C A 2 13.076 -2.083 9.150 1.00 11.68 C
ATOM 41 P G A 3 15.502 -3.844 4.495 1.00 14.88 P
ATOM 42 OP1 G A 3 16.494 -4.311 3.497 1.00 16.03 O
ATOM 43 OP2 G A 3 14.940 -2.490 4.382 1.00 15.75 O
ATOM 44 O5' G A 3 14.297 -4.908 4.521 1.00 13.36 O
ATOM 45 C5' G A 3 14.558 -6.309 4.615 1.00 12.75 C
ATOM 46 C4' G A 3 13.286 -7.120 4.855 1.00 11.81 C
ATOM 47 O4' G A 3 12.588 -6.751 6.032 1.00 11.17 O
ATOM 48 C3' G A 3 12.252 -6.992 3.751 1.00 10.67 C
ATOM 49 O3' G A 3 12.682 -7.725 2.618 1.00 11.71 O
ATOM 50 C2' G A 3 11.053 -7.605 4.413 1.00 11.91 C
ATOM 51 O2' G A 3 11.150 -9.035 4.662 1.00 14.44 O
ATOM 52 C1' G A 3 11.194 -6.946 5.743 1.00 12.21 C
ATOM 53 N9 G A 3 10.477 -5.688 5.936 1.00 11.90 N
ATOM 54 C8 G A 3 11.000 -4.436 5.992 1.00 12.80 C
ATOM 55 N7 G A 3 10.123 -3.506 6.267 1.00 13.96 N
ATOM 56 C5 G A 3 8.928 -4.204 6.419 1.00 10.89 C
ATOM 57 C6 G A 3 7.637 -3.716 6.766 1.00 9.46 C
ATOM 58 O6 G A 3 7.283 -2.553 7.015 1.00 8.25 O
ATOM 59 N1 G A 3 6.741 -4.764 6.805 1.00 9.25 N
ATOM 60 C2 G A 3 7.020 -6.108 6.568 1.00 9.39 C
ATOM 61 N2 G A 3 6.006 -6.965 6.639 1.00 7.49 N
ATOM 62 N3 G A 3 8.236 -6.566 6.266 1.00 10.20 N
ATOM 63 C4 G A 3 9.140 -5.555 6.207 1.00 11.63 C
ATOM 64 P DA A 4 12.206 -7.428 1.146 1.00 13.84 P
ATOM 65 OP1 DA A 4 13.131 -8.150 0.233 1.00 14.09 O
ATOM 66 OP2 DA A 4 12.011 -5.959 0.978 1.00 16.45 O
ATOM 67 O5' DA A 4 10.746 -8.041 1.010 1.00 12.39 O
ATOM 68 C5' DA A 4 10.467 -9.440 1.168 1.00 12.42 C
ATOM 69 C4' DA A 4 9.016 -9.673 1.535 1.00 11.93 C
ATOM 70 O4' DA A 4 8.642 -9.109 2.791 1.00 10.02 O
ATOM 71 C3' DA A 4 8.036 -9.058 0.514 1.00 13.36 C
ATOM 72 O3' DA A 4 7.933 -9.886 -0.634 1.00 13.49 O
ATOM 73 C2' DA A 4 6.782 -9.033 1.347 1.00 12.65 C
ATOM 74 C1' DA A 4 7.309 -8.536 2.676 1.00 12.18 C
ATOM 75 N9 DA A 4 7.338 -7.029 2.768 1.00 13.17 N
ATOM 76 C8 DA A 4 8.389 -6.160 2.553 1.00 12.59 C
ATOM 77 N7 DA A 4 8.121 -4.904 2.748 1.00 12.65 N
ATOM 78 C5 DA A 4 6.803 -4.924 3.160 1.00 11.91 C
ATOM 79 C6 DA A 4 5.933 -3.890 3.526 1.00 12.29 C
ATOM 80 N6 DA A 4 6.322 -2.607 3.515 1.00 10.65 N
ATOM 81 N1 DA A 4 4.673 -4.237 3.844 1.00 12.18 N
ATOM 82 C2 DA A 4 4.305 -5.523 3.816 1.00 11.75 C
ATOM 83 N3 DA A 4 5.043 -6.586 3.510 1.00 13.21 N
ATOM 84 C4 DA A 4 6.301 -6.209 3.171 1.00 12.71 C
ATOM 85 P DT A 5 7.635 -9.350 -2.108 1.00 14.28 P
ATOM 86 OP1 DT A 5 7.521 -10.574 -2.945 1.00 14.73 O
ATOM 87 OP2 DT A 5 8.566 -8.274 -2.516 1.00 11.37 O
ATOM 88 O5' DT A 5 6.157 -8.717 -2.094 1.00 13.57 O
ATOM 89 C5' DT A 5 4.942 -9.474 -1.959 1.00 11.65 C
ATOM 90 C4' DT A 5 3.791 -8.578 -1.476 1.00 11.51 C
ATOM 91 O4' DT A 5 4.047 -7.967 -0.198 1.00 12.65 O
ATOM 92 C3' DT A 5 3.568 -7.414 -2.408 1.00 10.51 C
ATOM 93 O3' DT A 5 2.900 -7.797 -3.591 1.00 9.71 O
ATOM 94 C2' DT A 5 2.739 -6.590 -1.453 1.00 10.18 C
ATOM 95 C1' DT A 5 3.458 -6.663 -0.136 1.00 10.21 C
ATOM 96 N1 DT A 5 4.448 -5.556 -0.021 1.00 10.84 N
ATOM 97 C2 DT A 5 3.992 -4.315 0.430 1.00 11.43 C
ATOM 98 O2 DT A 5 2.837 -4.075 0.767 1.00 11.40 O
ATOM 99 N3 DT A 5 4.920 -3.309 0.505 1.00 11.50 N
ATOM 100 C4 DT A 5 6.243 -3.413 0.151 1.00 11.82 C
ATOM 101 O4 DT A 5 6.965 -2.431 0.271 1.00 14.17 O
ATOM 102 C5 DT A 5 6.646 -4.719 -0.339 1.00 11.36 C
ATOM 103 C7 DT A 5 8.072 -4.948 -0.754 1.00 9.28 C
ATOM 104 C6 DT A 5 5.759 -5.723 -0.411 1.00 10.99 C
ATOM 105 P DA A 6 2.968 -6.876 -4.873 1.00 12.12 P
ATOM 106 OP1 DA A 6 2.465 -7.603 -6.037 1.00 12.72 O
ATOM 107 OP2 DA A 6 4.356 -6.369 -4.999 1.00 15.23 O
ATOM 108 O5' DA A 6 2.053 -5.672 -4.524 1.00 13.16 O
ATOM 109 C5' DA A 6 0.660 -5.914 -4.291 1.00 15.29 C
ATOM 110 C4' DA A 6 -0.020 -4.712 -3.666 1.00 14.65 C
ATOM 111 O4' DA A 6 0.672 -4.242 -2.497 1.00 14.93 O
ATOM 112 C3' DA A 6 0.009 -3.568 -4.689 1.00 16.40 C
ATOM 113 O3' DA A 6 -1.157 -3.662 -5.482 1.00 17.98 O
ATOM 114 C2' DA A 6 -0.027 -2.370 -3.781 1.00 15.89 C
ATOM 115 C1' DA A 6 0.813 -2.813 -2.625 1.00 13.85 C
ATOM 116 N9 DA A 6 2.214 -2.390 -2.677 1.00 12.99 N
ATOM 117 C8 DA A 6 3.341 -3.101 -2.981 1.00 11.11 C
ATOM 118 N7 DA A 6 4.449 -2.422 -2.792 1.00 12.23 N
ATOM 119 C5 DA A 6 4.020 -1.192 -2.291 1.00 11.18 C
ATOM 120 C6 DA A 6 4.709 -0.031 -1.862 1.00 11.20 C
ATOM 121 N6 DA A 6 6.049 0.098 -1.880 1.00 10.73 N
ATOM 122 N1 DA A 6 3.950 1.004 -1.439 1.00 13.06 N
ATOM 123 C2 DA A 6 2.617 0.882 -1.426 1.00 12.96 C
ATOM 124 N3 DA A 6 1.865 -0.150 -1.779 1.00 11.37 N
ATOM 125 C4 DA A 6 2.651 -1.168 -2.215 1.00 12.65 C
ATOM 126 P DT A 7 -1.364 -2.937 -6.887 1.00 18.61 P
ATOM 127 OP1 DT A 7 -2.584 -3.534 -7.474 1.00 21.10 O
ATOM 128 OP2 DT A 7 -0.084 -2.881 -7.638 1.00 19.99 O
ATOM 129 O5' DT A 7 -1.640 -1.411 -6.503 1.00 19.63 O
ATOM 130 C5' DT A 7 -2.731 -0.958 -5.689 1.00 17.29 C
ATOM 131 C4' DT A 7 -2.637 0.543 -5.453 1.00 15.78 C
ATOM 132 O4' DT A 7 -1.457 1.054 -4.764 1.00 17.15 O
ATOM 133 C3' DT A 7 -2.751 1.269 -6.781 1.00 15.20 C
ATOM 134 O3' DT A 7 -3.617 2.329 -6.454 1.00 17.30 O
ATOM 135 C2' DT A 7 -1.316 1.742 -7.045 1.00 13.50 C
ATOM 136 C1' DT A 7 -0.702 1.959 -5.640 1.00 13.41 C
ATOM 137 N1 DT A 7 0.755 1.647 -5.525 1.00 12.21 N
ATOM 138 C2 DT A 7 1.583 2.580 -4.924 1.00 10.97 C
ATOM 139 O2 DT A 7 1.216 3.678 -4.545 1.00 14.79 O
ATOM 140 N3 DT A 7 2.896 2.247 -4.779 1.00 9.91 N
ATOM 141 C4 DT A 7 3.470 1.065 -5.171 1.00 11.43 C
ATOM 142 O4 DT A 7 4.671 0.851 -5.022 1.00 11.86 O
ATOM 143 C5 DT A 7 2.558 0.131 -5.761 1.00 11.09 C
ATOM 144 C7 DT A 7 3.112 -1.199 -6.222 1.00 11.09 C
ATOM 145 C6 DT A 7 1.264 0.433 -5.922 1.00 11.00 C
ATOM 146 P DA A 8 -5.201 2.219 -6.281 1.00 17.95 P
ATOM 147 OP1 DA A 8 -5.622 3.469 -5.634 1.00 23.25 O
ATOM 148 OP2 DA A 8 -5.670 0.963 -5.690 1.00 24.78 O
ATOM 149 O5' DA A 8 -5.707 2.157 -7.757 1.00 19.51 O
ATOM 150 C5' DA A 8 -5.198 3.081 -8.668 1.00 16.56 C
ATOM 151 C4' DA A 8 -5.556 2.543 -9.969 1.00 16.30 C
ATOM 152 O4' DA A 8 -6.952 2.720 -10.174 1.00 14.57 O
ATOM 153 C3' DA A 8 -4.833 3.352 -10.993 1.00 17.20 C
ATOM 154 O3' DA A 8 -3.504 2.828 -11.119 1.00 17.63 O
ATOM 155 C2' DA A 8 -5.738 3.201 -12.200 1.00 14.96 C
ATOM 156 C1' DA A 8 -7.124 3.042 -11.572 1.00 15.11 C
ATOM 157 N9 DA A 8 -7.998 4.202 -11.784 1.00 13.40 N
ATOM 158 C8 DA A 8 -9.267 4.158 -12.268 1.00 13.81 C
ATOM 159 N7 DA A 8 -9.851 5.324 -12.337 1.00 15.66 N
ATOM 160 C5 DA A 8 -8.908 6.193 -11.847 1.00 13.61 C
ATOM 161 C6 DA A 8 -8.923 7.574 -11.693 1.00 15.36 C
ATOM 162 N6 DA A 8 -9.986 8.332 -12.031 1.00 13.97 N
ATOM 163 N1 DA A 8 -7.809 8.119 -11.177 1.00 14.20 N
ATOM 164 C2 DA A 8 -6.774 7.359 -10.856 1.00 13.54 C
ATOM 165 N3 DA A 8 -6.629 6.061 -10.972 1.00 15.06 N
ATOM 166 C4 DA A 8 -7.765 5.522 -11.489 1.00 14.49 C
ATOM 167 P C A 9 -2.231 3.713 -11.632 1.00 17.37 P
ATOM 168 OP1 C A 9 -2.720 4.776 -12.531 1.00 15.36 O
ATOM 169 OP2 C A 9 -1.216 2.792 -12.169 1.00 17.79 O
ATOM 170 O5' C A 9 -1.558 4.402 -10.338 1.00 18.37 O
ATOM 171 C5' C A 9 -2.189 5.421 -9.537 1.00 18.41 C
ATOM 172 C4' C A 9 -1.147 6.187 -8.753 1.00 15.94 C
ATOM 173 O4' C A 9 -0.492 5.318 -7.837 1.00 16.38 O
ATOM 174 C3' C A 9 0.003 6.680 -9.630 1.00 13.99 C
ATOM 175 O3' C A 9 -0.317 7.815 -10.456 1.00 13.79 O
ATOM 176 C2' C A 9 1.010 7.018 -8.536 1.00 15.41 C
ATOM 177 O2' C A 9 0.690 8.266 -7.883 1.00 13.94 O
ATOM 178 C1' C A 9 0.846 5.799 -7.604 1.00 14.83 C
ATOM 179 N1 C A 9 1.883 4.732 -7.833 1.00 14.72 N
ATOM 180 C2 C A 9 3.185 4.941 -7.354 1.00 12.23 C
ATOM 181 O2 C A 9 3.530 5.962 -6.757 1.00 12.56 O
ATOM 182 N3 C A 9 4.102 3.968 -7.579 1.00 12.88 N
ATOM 183 C4 C A 9 3.797 2.836 -8.228 1.00 11.73 C
ATOM 184 N4 C A 9 4.758 1.932 -8.384 1.00 10.83 N
ATOM 185 C5 C A 9 2.485 2.607 -8.735 1.00 11.93 C
ATOM 186 C6 C A 9 1.562 3.568 -8.506 1.00 13.89 C
ATOM 187 P G A 10 0.579 8.137 -11.704 1.00 13.70 P
ATOM 188 OP1 G A 10 -0.203 9.074 -12.544 1.00 11.20 O
ATOM 189 OP2 G A 10 0.856 6.861 -12.397 1.00 14.02 O
ATOM 190 O5' G A 10 1.955 8.771 -11.270 1.00 13.36 O
ATOM 191 C5' G A 10 1.988 10.084 -10.701 1.00 14.05 C
ATOM 192 C4' G A 10 3.373 10.400 -10.166 1.00 13.86 C
ATOM 193 O4' G A 10 3.819 9.338 -9.320 1.00 13.62 O
ATOM 194 C3' G A 10 4.433 10.449 -11.254 1.00 11.91 C
ATOM 195 O3' G A 10 4.428 11.718 -11.844 1.00 12.47 O
ATOM 196 C2' G A 10 5.710 10.196 -10.472 1.00 11.99 C
ATOM 197 O2' G A 10 6.114 11.303 -9.674 1.00 10.10 O
ATOM 198 C1' G A 10 5.218 9.129 -9.529 1.00 11.93 C
ATOM 199 N9 G A 10 5.429 7.721 -9.882 1.00 12.23 N
ATOM 200 C8 G A 10 4.499 6.753 -10.183 1.00 13.43 C
ATOM 201 N7 G A 10 5.008 5.564 -10.368 1.00 12.50 N
ATOM 202 C5 G A 10 6.363 5.758 -10.133 1.00 12.34 C
ATOM 203 C6 G A 10 7.436 4.833 -10.179 1.00 10.92 C
ATOM 204 O6 G A 10 7.351 3.641 -10.434 1.00 11.73 O
ATOM 205 N1 G A 10 8.675 5.429 -9.915 1.00 11.60 N
ATOM 206 C2 G A 10 8.856 6.772 -9.639 1.00 10.21 C
ATOM 207 N2 G A 10 10.091 7.224 -9.402 1.00 9.38 N
ATOM 208 N3 G A 10 7.831 7.634 -9.593 1.00 11.94 N
ATOM 209 C4 G A 10 6.628 7.076 -9.853 1.00 11.86 C
ATOM 210 P C A 11 4.939 11.930 -13.294 1.00 12.69 P
ATOM 211 OP1 C A 11 4.831 13.374 -13.534 1.00 14.93 O
ATOM 212 OP2 C A 11 4.245 11.062 -14.251 1.00 13.46 O
ATOM 213 O5' C A 11 6.454 11.514 -13.306 1.00 14.18 O
ATOM 214 C5' C A 11 7.439 12.355 -12.680 1.00 14.18 C
ATOM 215 C4' C A 11 8.847 11.788 -12.735 1.00 14.93 C
ATOM 216 O4' C A 11 8.902 10.548 -12.055 1.00 14.20 O
ATOM 217 C3' C A 11 9.331 11.448 -14.159 1.00 16.17 C
ATOM 218 O3' C A 11 9.756 12.582 -14.942 1.00 18.18 O
ATOM 219 C2' C A 11 10.477 10.439 -13.919 1.00 16.11 C
ATOM 220 O2' C A 11 11.751 11.068 -13.526 1.00 17.46 O
ATOM 221 C1' C A 11 9.836 9.672 -12.746 1.00 14.03 C
ATOM 222 N1 C A 11 9.184 8.361 -13.065 1.00 13.70 N
ATOM 223 C2 C A 11 9.976 7.234 -13.012 1.00 12.65 C
ATOM 224 O2 C A 11 11.182 7.288 -12.797 1.00 15.46 O
ATOM 225 N3 C A 11 9.384 6.035 -13.227 1.00 13.50 N
ATOM 226 C4 C A 11 8.090 5.929 -13.490 1.00 10.71 C
ATOM 227 N4 C A 11 7.609 4.710 -13.685 1.00 8.53 N
ATOM 228 C5 C A 11 7.245 7.076 -13.545 1.00 10.84 C
ATOM 229 C6 C A 11 7.836 8.261 -13.329 1.00 10.91 C
TER 230 C A 11
HETATM 231 N1 SPM A 12 -2.204 7.019 -14.030 1.00 10.61 N
HETATM 232 C2 SPM A 12 -3.090 8.132 -14.243 1.00 9.95 C
HETATM 233 C3 SPM A 12 -3.991 8.359 -13.014 1.00 14.07 C
HETATM 234 C4 SPM A 12 -3.426 9.143 -11.775 1.00 16.73 C
HETATM 235 N5 SPM A 12 -2.849 10.495 -12.087 1.00 20.18 N
HETATM 236 C6 SPM A 12 -2.728 11.440 -10.928 1.00 21.16 C
HETATM 237 C7 SPM A 12 -3.660 12.661 -11.042 1.00 19.20 C
HETATM 238 C8 SPM A 12 -3.237 13.630 -12.157 1.00 17.71 C
HETATM 239 C9 SPM A 12 -4.312 14.671 -12.300 1.00 14.08 C
HETATM 240 N10 SPM A 12 -4.163 15.570 -13.478 1.00 15.73 N
HETATM 241 C11 SPM A 12 -5.329 16.493 -13.617 1.00 12.56 C
HETATM 242 C12 SPM A 12 -5.750 17.231 -12.347 1.00 13.68 C
HETATM 243 C13 SPM A 12 -6.867 18.207 -12.723 1.00 11.13 C
HETATM 244 N14 SPM A 12 -7.469 18.752 -11.528 1.00 12.51 N
HETATM 245 N1 SPM A 13 -7.169 5.434 -4.826 1.00 14.82 N
HETATM 246 C2 SPM A 13 -7.300 6.145 -6.084 1.00 18.62 C
HETATM 247 C3 SPM A 13 -7.093 7.601 -5.896 1.00 17.99 C
HETATM 248 C4 SPM A 13 -7.249 8.233 -7.245 1.00 19.85 C
HETATM 249 N5 SPM A 13 -6.975 9.680 -7.064 1.00 18.84 N
HETATM 250 C6 SPM A 13 -7.293 10.434 -8.315 1.00 22.20 C
HETATM 251 C7 SPM A 13 -7.550 11.932 -8.077 1.00 23.80 C
HETATM 252 C8 SPM A 13 -6.413 12.650 -7.328 1.00 24.19 C
HETATM 253 C9 SPM A 13 -6.593 14.154 -7.473 1.00 26.14 C
HETATM 254 N10 SPM A 13 -5.915 14.728 -6.302 1.00 26.19 N
HETATM 255 C11 SPM A 13 -5.499 16.157 -6.367 1.00 27.34 C
HETATM 256 C12 SPM A 13 -4.606 16.242 -5.110 1.00 26.41 C
HETATM 257 C13 SPM A 13 -3.780 17.485 -4.890 1.00 27.63 C
HETATM 258 N14 SPM A 13 -2.598 17.586 -5.727 1.00 26.33 N
HETATM 259 O HOH A 14 0.000 10.953 -14.390 0.50 34.83 O
HETATM 260 O HOH A 15 21.372 0.666 12.877 1.00 14.95 O
HETATM 261 O HOH A 16 18.836 1.321 11.645 1.00 20.50 O
HETATM 262 O HOH A 17 4.373 -0.827 -9.910 1.00 9.48 O
HETATM 263 O HOH A 18 -4.190 8.711 -7.801 1.00 15.51 O
HETATM 264 O HOH A 19 5.839 -10.258 5.833 1.00 15.74 O
HETATM 265 O HOH A 20 19.601 2.276 9.097 1.00 46.77 O
HETATM 266 O HOH A 21 -10.359 11.289 -10.260 1.00 32.14 O
HETATM 267 O HOH A 22 7.683 13.504 -16.913 1.00 29.45 O
HETATM 268 O HOH A 23 -4.381 4.936 -14.961 1.00 16.72 O
HETATM 269 O HOH A 24 -6.781 10.851 -11.697 1.00 32.12 O
HETATM 270 O HOH A 25 9.498 1.361 8.843 1.00 2.00 O
HETATM 271 O HOH A 26 8.683 10.104 -8.408 1.00 41.51 O
HETATM 272 O HOH A 27 11.416 9.921 -8.126 1.00 33.08 O
HETATM 273 O HOH A 28 0.269 17.434 -6.082 1.00 26.67 O
HETATM 274 O HOH A 29 2.718 9.164 -5.813 1.00 29.55 O
HETATM 275 O HOH A 30 11.498 -8.050 -4.007 1.00 27.32 O
HETATM 276 O HOH A 31 6.603 -3.418 -3.950 1.00 18.82 O
HETATM 277 O HOH A 32 7.166 -6.090 -4.080 1.00 34.94 O
HETATM 278 O HOH A 33 9.679 -13.383 -2.112 1.00 36.40 O
HETATM 279 O HOH A 34 -1.585 -4.040 -0.089 1.00 37.38 O
HETATM 280 O HOH A 35 9.051 -0.988 -1.555 1.00 44.61 O
HETATM 281 O HOH A 36 15.440 -6.459 -1.376 1.00 31.53 O
HETATM 282 O HOH A 37 1.440 -8.476 -8.548 1.00 28.71 O
HETATM 283 O HOH A 38 13.170 11.191 -11.046 1.00 46.21 O
HETATM 284 O HOH A 39 -0.763 13.936 -8.689 1.00 29.05 O
HETATM 285 O HOH A 40 11.019 -11.115 -3.947 1.00 35.80 O
HETATM 286 O HOH A 41 13.248 -9.147 -2.045 1.00 33.77 O
HETATM 287 O HOH A 42 0.835 -0.730 -9.475 1.00 26.57 O
HETATM 288 O HOH A 43 1.340 11.647 -7.323 1.00 42.76 O
HETATM 289 O HOH A 44 -3.125 12.901 -5.754 1.00 34.45 O
HETATM 290 O HOH A 45 -3.577 -3.275 -2.604 1.00 45.36 O
HETATM 291 O HOH A 46 1.939 3.942 -12.144 1.00 35.70 O
HETATM 292 O HOH A 47 11.397 -5.871 -2.597 1.00 42.21 O
HETATM 293 O HOH A 48 -5.729 -3.865 -7.003 1.00 34.08 O
HETATM 294 O HOH A 49 -0.595 -2.168 -12.286 1.00 37.78 O
HETATM 295 O HOH A 50 19.179 1.860 5.724 1.00 37.38 O
HETATM 296 O HOH A 51 2.809 1.238 -13.421 1.00 40.98 O
CONECT 231 232
CONECT 232 231 233
CONECT 233 232 234
CONECT 234 233 235
CONECT 235 234 236
CONECT 236 235 237
CONECT 237 236 238
CONECT 238 237 239
CONECT 239 238 240
CONECT 240 239 241
CONECT 241 240 242
CONECT 242 241 243
CONECT 243 242 244
CONECT 244 243
CONECT 245 246
CONECT 246 245 247
CONECT 247 246 248
CONECT 248 247 249
CONECT 249 248 250
CONECT 250 249 251
CONECT 251 250 252
CONECT 252 251 253
CONECT 253 252 254
CONECT 254 253 255
CONECT 255 254 256
CONECT 256 255 257
CONECT 257 256 258
CONECT 258 257
MASTER 262 0 2 0 0 0 5 6 295 1 28 1
END