data_237D
#
_entry.id 237D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 237D pdb_0000237d 10.2210/pdb237d/pdb
RCSB UDJ031 ? ?
WWPDB D_1000177625 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1996-03-22
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-14
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 237D
_pdbx_database_status.recvd_initial_deposition_date 1995-09-28
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Spink, N.' 1
'Nunn, C.M.' 2
'Vojtechovsky, J.' 3
'Berman, H.M.' 4
'Neidle, S.' 5
#
_citation.id primary
_citation.title 'Crystal structure of a DNA decamer showing a novel pseudo four-way helix-helix junction.'
_citation.journal_abbrev Proc.Natl.Acad.Sci.USA
_citation.journal_volume 92
_citation.page_first 10767
_citation.page_last 10771
_citation.year 1995
_citation.journal_id_ASTM PNASA6
_citation.country US
_citation.journal_id_ISSN 0027-8424
_citation.journal_id_CSD 0040
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 7479880
_citation.pdbx_database_id_DOI 10.1073/pnas.92.23.10767
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Spink, N.' 1 ?
primary 'Nunn, C.M.' 2 ?
primary 'Vojtechovsky, J.' 3 ?
primary 'Berman, H.M.' 4 ?
primary 'Neidle, S.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3')
;
3045.005 1 ? ? ? ?
2 water nat water 18.015 48 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DA)(DA)(DT)(DT)(DG)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGCAATTGCG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DC n
1 4 DA n
1 5 DA n
1 6 DT n
1 7 DT n
1 8 DG n
1 9 DC n
1 10 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DC 3 3 3 DC C A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DA 5 5 5 DA A A . n
A 1 6 DT 6 6 6 DT T A . n
A 1 7 DT 7 7 7 DT T A . n
A 1 8 DG 8 8 8 DG G A . n
A 1 9 DC 9 9 9 DC C A . n
A 1 10 DG 10 10 10 DG G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 11 11 HOH HOH A .
B 2 HOH 2 12 12 HOH HOH A .
B 2 HOH 3 13 13 HOH HOH A .
B 2 HOH 4 14 14 HOH HOH A .
B 2 HOH 5 15 15 HOH HOH A .
B 2 HOH 6 16 16 HOH HOH A .
B 2 HOH 7 17 17 HOH HOH A .
B 2 HOH 8 18 18 HOH HOH A .
B 2 HOH 9 19 19 HOH HOH A .
B 2 HOH 10 20 20 HOH HOH A .
B 2 HOH 11 21 21 HOH HOH A .
B 2 HOH 12 22 22 HOH HOH A .
B 2 HOH 13 23 23 HOH HOH A .
B 2 HOH 14 24 24 HOH HOH A .
B 2 HOH 15 25 25 HOH HOH A .
B 2 HOH 16 26 26 HOH HOH A .
B 2 HOH 17 27 27 HOH HOH A .
B 2 HOH 18 28 28 HOH HOH A .
B 2 HOH 19 29 29 HOH HOH A .
B 2 HOH 20 30 30 HOH HOH A .
B 2 HOH 21 31 31 HOH HOH A .
B 2 HOH 22 32 32 HOH HOH A .
B 2 HOH 23 33 33 HOH HOH A .
B 2 HOH 24 34 34 HOH HOH A .
B 2 HOH 25 35 35 HOH HOH A .
B 2 HOH 26 36 36 HOH HOH A .
B 2 HOH 27 37 37 HOH HOH A .
B 2 HOH 28 38 38 HOH HOH A .
B 2 HOH 29 39 39 HOH HOH A .
B 2 HOH 30 40 40 HOH HOH A .
B 2 HOH 31 41 41 HOH HOH A .
B 2 HOH 32 42 42 HOH HOH A .
B 2 HOH 33 43 43 HOH HOH A .
B 2 HOH 34 44 44 HOH HOH A .
B 2 HOH 35 45 45 HOH HOH A .
B 2 HOH 36 46 46 HOH HOH A .
B 2 HOH 37 47 47 HOH HOH A .
B 2 HOH 38 48 48 HOH HOH A .
B 2 HOH 39 49 49 HOH HOH A .
B 2 HOH 40 50 50 HOH HOH A .
B 2 HOH 41 51 51 HOH HOH A .
B 2 HOH 42 52 52 HOH HOH A .
B 2 HOH 43 53 53 HOH HOH A .
B 2 HOH 44 54 54 HOH HOH A .
B 2 HOH 45 55 55 HOH HOH A .
B 2 HOH 46 56 56 HOH HOH A .
B 2 HOH 47 57 57 HOH HOH A .
B 2 HOH 48 58 58 HOH HOH A .
#
_software.name X-PLOR
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 237D
_cell.length_a 27.010
_cell.length_b 39.260
_cell.length_c 54.060
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 237D
_symmetry.space_group_name_H-M 'I 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 24
#
_exptl.entry_id 237D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.35
_exptl_crystal.density_percent_sol 47.73
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 287.00
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.00
_exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 287.00K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 MPD ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 'NA CACODYLATE' ? ? ?
1 5 1 BERENIL ? ? ?
1 6 2 WATER ? ? ?
1 7 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 294.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'AREA DETECTOR'
_diffrn_detector.type XENTRONICS
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 237D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low ?
_reflns.d_resolution_high 2.200
_reflns.number_obs 1521
_reflns.number_all 10180
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 237D
_refine.ls_number_reflns_obs 957
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 2.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.000
_refine.ls_d_res_high 2.500
_refine.ls_percent_reflns_obs 94.000
_refine.ls_R_factor_obs 0.2120000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.2120000
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 202
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 48
_refine_hist.number_atoms_total 250
_refine_hist.d_res_high 2.500
_refine_hist.d_res_low 8.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 2.30 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 237D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 237D
_struct.title 'CRYSTAL STRUCTURE OF A DNA DECAMER SHOWING A NOVEL PSEUDO FOUR-WAY HELIX-HELIX JUNCTION'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 237D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'B-DNA, DOUBLE HELIX, FLIPPED-OUT BASES, INTERMOLECULAR BASE TRIPLET, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 237D
_struct_ref.pdbx_db_accession 237D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 237D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 10
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 237D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 10
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 8_555 x,-y,-z+1/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 27.0300000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 9 N3 ? ? A DG 2 A DC 9 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 9 O2 ? ? A DG 2 A DC 9 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 9 N4 ? ? A DG 2 A DC 9 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 8 N1 ? ? A DC 3 A DG 8 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 8 O6 ? ? A DC 3 A DG 8 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 8 N2 ? ? A DC 3 A DG 8 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 7 N3 ? ? A DA 4 A DT 7 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 7 O4 ? ? A DA 4 A DT 7 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 6 N3 ? ? A DA 5 A DT 6 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 6 O4 ? ? A DA 5 A DT 6 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DT 6 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 6 A DA 5 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 6 A DA 5 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 7 A DA 4 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 7 A DA 4 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 8 A DC 3 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 8 A DC 3 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 8 A DC 3 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 9 A DG 2 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 9 A DG 2 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 9 A DG 2 8_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C4 A DC 1 ? ? N4 A DC 1 ? ? 1.252 1.335 -0.083 0.009 N
2 1 C5 A DC 1 ? ? C6 A DC 1 ? ? 1.287 1.339 -0.052 0.008 N
3 1 C5 A DG 2 ? ? C6 A DG 2 ? ? 1.354 1.419 -0.065 0.010 N
4 1 C5 A DA 4 ? ? C6 A DA 4 ? ? 1.349 1.406 -0.057 0.009 N
5 1 C5 A DG 8 ? ? C6 A DG 8 ? ? 1.343 1.419 -0.076 0.010 N
6 1 "C1'" A DG 10 ? ? N9 A DG 10 ? ? 1.277 1.468 -0.191 0.014 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "C3'" A DA 5 ? ? "O3'" A DA 5 ? ? P A DT 6 ? ? 140.89 119.70 21.19 1.20 Y
2 1 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "O3'" A DG 10 ? ? 92.90 109.70 -16.80 2.50 N
3 1 N9 A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 124.66 114.30 10.36 1.40 N
4 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 100.73 108.00 -7.27 0.70 N
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 1 DG A 2 ? ? 0.123 'SIDE CHAIN'
2 1 DG A 8 ? ? 0.071 'SIDE CHAIN'
#
loop_
_refine_B_iso.class
_refine_B_iso.details
_refine_B_iso.treatment
_refine_B_iso.pdbx_refine_id
'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION'
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION'
#
loop_
_refine_occupancy.class
_refine_occupancy.treatment
_refine_occupancy.pdbx_refine_id
'ALL ATOMS' fix 'X-RAY DIFFRACTION'
'ALL WATERS' fix 'X-RAY DIFFRACTION'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
_ndb_struct_conf_na.entry_id 237D
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 2 1_555 A DC 9 8_555 -0.294 -0.363 -0.240 -9.540 -2.318 -1.901 1 A_DG2:DC9_A A 2 ? A 9 ? 19 1
1 A DC 3 1_555 A DG 8 8_555 -0.467 -0.306 -0.102 -1.607 -4.299 -4.458 2 A_DC3:DG8_A A 3 ? A 8 ? 19 1
1 A DA 4 1_555 A DT 7 8_555 0.796 -0.186 -0.137 3.531 -12.522 -5.745 3 A_DA4:DT7_A A 4 ? A 7 ? 20 1
1 A DA 5 1_555 A DT 6 8_555 -0.327 -0.356 0.048 -1.710 -14.275 3.044 4 A_DA5:DT6_A A 5 ? A 6 ? 20 1
1 A DT 6 1_555 A DA 5 8_555 0.327 -0.356 0.048 1.710 -14.275 3.044 5 A_DT6:DA5_A A 6 ? A 5 ? 20 1
1 A DT 7 1_555 A DA 4 8_555 -0.796 -0.186 -0.137 -3.531 -12.522 -5.745 6 A_DT7:DA4_A A 7 ? A 4 ? 20 1
1 A DG 8 1_555 A DC 3 8_555 0.467 -0.306 -0.102 1.608 -4.299 -4.458 7 A_DG8:DC3_A A 8 ? A 3 ? 19 1
1 A DC 9 1_555 A DG 2 8_555 0.294 -0.363 -0.240 9.540 -2.318 -1.901 8 A_DC9:DG2_A A 9 ? A 2 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 2 1_555 A DC 9 8_555 A DC 3 1_555 A DG 8 8_555 0.073 0.538 3.182 -1.519 -1.355 37.430 1.009 -0.306 3.156 -2.110 2.364
37.483 1 AA_DG2DC3:DG8DC9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DC 3 1_555 A DG 8 8_555 A DA 4 1_555 A DT 7 8_555 -0.200 0.994 3.334 1.606 3.871 38.103 1.014 0.513 3.404 5.907 -2.451
38.324 2 AA_DC3DA4:DT7DG8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DA 4 1_555 A DT 7 8_555 A DA 5 1_555 A DT 6 8_555 0.045 -0.325 3.301 -3.825 5.318 30.010 -1.660 -0.837 3.168 10.119 7.277
30.701 3 AA_DA4DA5:DT6DT7_AA A 4 ? A 7 ? A 5 ? A 6 ?
1 A DA 5 1_555 A DT 6 8_555 A DT 6 1_555 A DA 5 8_555 0.000 -0.451 3.247 0.000 -7.159 41.529 0.114 0.000 3.277 -10.007 0.000
42.115 4 AA_DA5DT6:DA5DT6_AA A 5 ? A 6 ? A 6 ? A 5 ?
1 A DT 6 1_555 A DA 5 8_555 A DT 7 1_555 A DA 4 8_555 -0.045 -0.325 3.301 3.825 5.318 30.010 -1.660 0.837 3.168 10.119 -7.277
30.701 5 AA_DT6DT7:DA4DA5_AA A 6 ? A 5 ? A 7 ? A 4 ?
1 A DT 7 1_555 A DA 4 8_555 A DG 8 1_555 A DC 3 8_555 0.200 0.994 3.334 -1.606 3.871 38.103 1.014 -0.513 3.404 5.907 2.451
38.324 6 AA_DT7DG8:DC3DA4_AA A 7 ? A 4 ? A 8 ? A 3 ?
1 A DG 8 1_555 A DC 3 8_555 A DC 9 1_555 A DG 2 8_555 -0.073 0.538 3.182 1.519 -1.355 37.430 1.009 0.306 3.156 -2.110 -2.364
37.483 7 AA_DG8DC9:DG2DC3_AA A 8 ? A 3 ? A 9 ? A 2 ?
#
_atom_sites.entry_id 237D
_atom_sites.fract_transf_matrix[1][1] 0.037023
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.025471
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.018498
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 12.017 8.337 30.880 0.73 35.99 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 11.981 7.780 29.566 0.73 33.46 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 13.256 7.042 29.220 0.73 32.43 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 13.186 5.653 29.637 0.73 31.41 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 13.554 6.987 27.722 0.73 32.92 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 14.934 6.706 27.545 0.73 36.10 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 12.800 5.757 27.273 0.73 31.06 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 12.812 4.834 28.510 0.73 31.28 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 11.417 4.523 28.676 0.73 30.82 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 10.902 3.198 28.585 0.73 29.75 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 11.685 2.217 28.517 0.73 30.08 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 9.556 3.055 28.594 0.73 29.71 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 8.793 4.150 28.730 0.73 30.02 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 7.545 4.051 28.733 0.73 30.18 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 9.316 5.449 28.879 0.73 29.66 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 10.596 5.585 28.856 0.73 29.89 ? 1 DC A C6 1
ATOM 17 P P . DG A 1 2 ? 15.384 5.489 26.593 1.00 37.69 ? 2 DG A P 1
ATOM 18 O OP1 . DG A 1 2 ? 16.851 5.232 26.853 1.00 36.84 ? 2 DG A OP1 1
ATOM 19 O OP2 . DG A 1 2 ? 14.918 5.925 25.235 1.00 40.15 ? 2 DG A OP2 1
ATOM 20 O "O5'" . DG A 1 2 ? 14.502 4.214 26.993 1.00 31.24 ? 2 DG A "O5'" 1
ATOM 21 C "C5'" . DG A 1 2 ? 15.068 3.170 27.762 1.00 32.59 ? 2 DG A "C5'" 1
ATOM 22 C "C4'" . DG A 1 2 ? 14.829 1.843 27.089 1.00 29.66 ? 2 DG A "C4'" 1
ATOM 23 O "O4'" . DG A 1 2 ? 13.411 1.759 26.829 1.00 27.22 ? 2 DG A "O4'" 1
ATOM 24 C "C3'" . DG A 1 2 ? 15.521 1.646 25.734 1.00 29.11 ? 2 DG A "C3'" 1
ATOM 25 O "O3'" . DG A 1 2 ? 16.241 0.393 25.737 1.00 30.71 ? 2 DG A "O3'" 1
ATOM 26 C "C2'" . DG A 1 2 ? 14.368 1.671 24.723 1.00 26.01 ? 2 DG A "C2'" 1
ATOM 27 C "C1'" . DG A 1 2 ? 13.189 1.190 25.546 1.00 20.61 ? 2 DG A "C1'" 1
ATOM 28 N N9 . DG A 1 2 ? 11.831 1.573 25.187 1.00 10.24 ? 2 DG A N9 1
ATOM 29 C C8 . DG A 1 2 ? 11.358 2.842 25.052 1.00 11.01 ? 2 DG A C8 1
ATOM 30 N N7 . DG A 1 2 ? 10.048 2.897 25.031 1.00 6.81 ? 2 DG A N7 1
ATOM 31 C C5 . DG A 1 2 ? 9.654 1.588 25.094 1.00 2.41 ? 2 DG A C5 1
ATOM 32 C C6 . DG A 1 2 ? 8.399 1.086 25.169 1.00 5.17 ? 2 DG A C6 1
ATOM 33 O O6 . DG A 1 2 ? 7.340 1.754 25.272 1.00 7.94 ? 2 DG A O6 1
ATOM 34 N N1 . DG A 1 2 ? 8.382 -0.326 25.159 1.00 2.00 ? 2 DG A N1 1
ATOM 35 C C2 . DG A 1 2 ? 9.510 -1.106 25.130 1.00 5.39 ? 2 DG A C2 1
ATOM 36 N N2 . DG A 1 2 ? 9.359 -2.458 25.109 1.00 2.92 ? 2 DG A N2 1
ATOM 37 N N3 . DG A 1 2 ? 10.745 -0.590 25.117 1.00 6.10 ? 2 DG A N3 1
ATOM 38 C C4 . DG A 1 2 ? 10.731 0.752 25.101 1.00 5.72 ? 2 DG A C4 1
ATOM 39 P P . DC A 1 3 ? 17.280 0.063 24.544 1.00 33.39 ? 3 DC A P 1
ATOM 40 O OP1 . DC A 1 3 ? 18.652 -0.293 25.056 1.00 33.41 ? 3 DC A OP1 1
ATOM 41 O OP2 . DC A 1 3 ? 17.129 1.257 23.667 1.00 32.01 ? 3 DC A OP2 1
ATOM 42 O "O5'" . DC A 1 3 ? 16.696 -1.264 23.887 1.00 27.27 ? 3 DC A "O5'" 1
ATOM 43 C "C5'" . DC A 1 3 ? 15.307 -1.438 23.854 1.00 24.60 ? 3 DC A "C5'" 1
ATOM 44 C "C4'" . DC A 1 3 ? 14.962 -2.761 23.233 1.00 21.74 ? 3 DC A "C4'" 1
ATOM 45 O "O4'" . DC A 1 3 ? 13.516 -2.734 23.070 1.00 19.12 ? 3 DC A "O4'" 1
ATOM 46 C "C3'" . DC A 1 3 ? 15.511 -2.882 21.823 1.00 23.02 ? 3 DC A "C3'" 1
ATOM 47 O "O3'" . DC A 1 3 ? 15.765 -4.276 21.514 1.00 25.29 ? 3 DC A "O3'" 1
ATOM 48 C "C2'" . DC A 1 3 ? 14.420 -2.188 20.997 1.00 18.07 ? 3 DC A "C2'" 1
ATOM 49 C "C1'" . DC A 1 3 ? 13.130 -2.453 21.756 1.00 12.05 ? 3 DC A "C1'" 1
ATOM 50 N N1 . DC A 1 3 ? 12.196 -1.312 21.803 1.00 7.77 ? 3 DC A N1 1
ATOM 51 C C2 . DC A 1 3 ? 10.807 -1.529 21.927 1.00 7.23 ? 3 DC A C2 1
ATOM 52 O O2 . DC A 1 3 ? 10.392 -2.670 22.165 1.00 9.99 ? 3 DC A O2 1
ATOM 53 N N3 . DC A 1 3 ? 9.964 -0.488 21.814 1.00 4.24 ? 3 DC A N3 1
ATOM 54 C C4 . DC A 1 3 ? 10.473 0.759 21.657 1.00 6.52 ? 3 DC A C4 1
ATOM 55 N N4 . DC A 1 3 ? 9.629 1.834 21.543 1.00 3.02 ? 3 DC A N4 1
ATOM 56 C C5 . DC A 1 3 ? 11.866 0.994 21.611 1.00 3.24 ? 3 DC A C5 1
ATOM 57 C C6 . DC A 1 3 ? 12.677 -0.057 21.684 1.00 6.81 ? 3 DC A C6 1
ATOM 58 P P . DA A 1 4 ? 15.856 -4.783 19.963 1.00 30.50 ? 4 DA A P 1
ATOM 59 O OP1 . DA A 1 4 ? 16.731 -6.002 19.908 1.00 30.44 ? 4 DA A OP1 1
ATOM 60 O OP2 . DA A 1 4 ? 16.184 -3.612 19.058 1.00 29.90 ? 4 DA A OP2 1
ATOM 61 O "O5'" . DA A 1 4 ? 14.375 -5.313 19.627 1.00 26.00 ? 4 DA A "O5'" 1
ATOM 62 C "C5'" . DA A 1 4 ? 13.851 -6.394 20.364 1.00 21.83 ? 4 DA A "C5'" 1
ATOM 63 C "C4'" . DA A 1 4 ? 12.520 -6.823 19.807 1.00 21.93 ? 4 DA A "C4'" 1
ATOM 64 O "O4'" . DA A 1 4 ? 11.576 -5.730 19.710 1.00 20.82 ? 4 DA A "O4'" 1
ATOM 65 C "C3'" . DA A 1 4 ? 12.581 -7.372 18.413 1.00 23.70 ? 4 DA A "C3'" 1
ATOM 66 O "O3'" . DA A 1 4 ? 11.437 -8.201 18.307 1.00 27.33 ? 4 DA A "O3'" 1
ATOM 67 C "C2'" . DA A 1 4 ? 12.446 -6.099 17.594 1.00 22.01 ? 4 DA A "C2'" 1
ATOM 68 C "C1'" . DA A 1 4 ? 11.383 -5.345 18.369 1.00 16.08 ? 4 DA A "C1'" 1
ATOM 69 N N9 . DA A 1 4 ? 11.475 -3.881 18.304 1.00 9.93 ? 4 DA A N9 1
ATOM 70 C C8 . DA A 1 4 ? 12.571 -3.061 18.112 1.00 6.78 ? 4 DA A C8 1
ATOM 71 N N7 . DA A 1 4 ? 12.257 -1.765 18.062 1.00 2.13 ? 4 DA A N7 1
ATOM 72 C C5 . DA A 1 4 ? 10.895 -1.761 18.264 1.00 2.00 ? 4 DA A C5 1
ATOM 73 C C6 . DA A 1 4 ? 10.018 -0.738 18.335 1.00 2.00 ? 4 DA A C6 1
ATOM 74 N N6 . DA A 1 4 ? 10.389 0.515 18.212 1.00 2.00 ? 4 DA A N6 1
ATOM 75 N N1 . DA A 1 4 ? 8.719 -1.028 18.539 1.00 2.16 ? 4 DA A N1 1
ATOM 76 C C2 . DA A 1 4 ? 8.392 -2.340 18.671 1.00 2.24 ? 4 DA A C2 1
ATOM 77 N N3 . DA A 1 4 ? 9.157 -3.399 18.618 1.00 2.00 ? 4 DA A N3 1
ATOM 78 C C4 . DA A 1 4 ? 10.402 -3.037 18.412 1.00 2.00 ? 4 DA A C4 1
ATOM 79 P P . DA A 1 5 ? 11.084 -8.892 16.912 1.00 32.13 ? 5 DA A P 1
ATOM 80 O OP1 . DA A 1 5 ? 10.632 -10.309 17.183 1.00 30.20 ? 5 DA A OP1 1
ATOM 81 O OP2 . DA A 1 5 ? 12.243 -8.606 15.982 1.00 30.03 ? 5 DA A OP2 1
ATOM 82 O "O5'" . DA A 1 5 ? 9.735 -8.145 16.541 1.00 29.15 ? 5 DA A "O5'" 1
ATOM 83 C "C5'" . DA A 1 5 ? 8.700 -8.190 17.507 1.00 27.39 ? 5 DA A "C5'" 1
ATOM 84 C "C4'" . DA A 1 5 ? 7.403 -7.786 16.880 1.00 26.27 ? 5 DA A "C4'" 1
ATOM 85 O "O4'" . DA A 1 5 ? 7.419 -6.341 16.792 1.00 23.90 ? 5 DA A "O4'" 1
ATOM 86 C "C3'" . DA A 1 5 ? 7.428 -8.323 15.461 1.00 29.30 ? 5 DA A "C3'" 1
ATOM 87 O "O3'" . DA A 1 5 ? 6.266 -9.030 15.137 1.00 34.95 ? 5 DA A "O3'" 1
ATOM 88 C "C2'" . DA A 1 5 ? 7.734 -7.106 14.583 1.00 24.58 ? 5 DA A "C2'" 1
ATOM 89 C "C1'" . DA A 1 5 ? 7.432 -5.903 15.450 1.00 17.06 ? 5 DA A "C1'" 1
ATOM 90 N N9 . DA A 1 5 ? 8.369 -4.786 15.344 1.00 8.32 ? 5 DA A N9 1
ATOM 91 C C8 . DA A 1 5 ? 9.731 -4.759 15.253 1.00 8.66 ? 5 DA A C8 1
ATOM 92 N N7 . DA A 1 5 ? 10.225 -3.518 15.160 1.00 8.63 ? 5 DA A N7 1
ATOM 93 C C5 . DA A 1 5 ? 9.099 -2.707 15.205 1.00 2.00 ? 5 DA A C5 1
ATOM 94 C C6 . DA A 1 5 ? 8.912 -1.304 15.118 1.00 2.00 ? 5 DA A C6 1
ATOM 95 N N6 . DA A 1 5 ? 9.858 -0.382 14.968 1.00 2.00 ? 5 DA A N6 1
ATOM 96 N N1 . DA A 1 5 ? 7.669 -0.861 15.170 1.00 2.00 ? 5 DA A N1 1
ATOM 97 C C2 . DA A 1 5 ? 6.664 -1.727 15.245 1.00 4.70 ? 5 DA A C2 1
ATOM 98 N N3 . DA A 1 5 ? 6.709 -3.059 15.305 1.00 4.01 ? 5 DA A N3 1
ATOM 99 C C4 . DA A 1 5 ? 7.965 -3.477 15.302 1.00 2.00 ? 5 DA A C4 1
ATOM 100 P P . DT A 1 6 ? 5.105 -9.030 14.110 1.00 33.56 ? 6 DT A P 1
ATOM 101 O OP1 . DT A 1 6 ? 4.224 -10.125 14.456 1.00 32.92 ? 6 DT A OP1 1
ATOM 102 O OP2 . DT A 1 6 ? 5.951 -8.994 12.837 1.00 35.07 ? 6 DT A OP2 1
ATOM 103 O "O5'" . DT A 1 6 ? 4.349 -7.695 14.218 1.00 27.12 ? 6 DT A "O5'" 1
ATOM 104 C "C5'" . DT A 1 6 ? 4.681 -6.627 13.378 1.00 29.10 ? 6 DT A "C5'" 1
ATOM 105 C "C4'" . DT A 1 6 ? 3.568 -5.620 13.421 1.00 25.02 ? 6 DT A "C4'" 1
ATOM 106 O "O4'" . DT A 1 6 ? 4.175 -4.331 13.588 1.00 24.25 ? 6 DT A "O4'" 1
ATOM 107 C "C3'" . DT A 1 6 ? 2.806 -5.536 12.122 1.00 24.19 ? 6 DT A "C3'" 1
ATOM 108 O "O3'" . DT A 1 6 ? 1.499 -5.048 12.311 1.00 26.08 ? 6 DT A "O3'" 1
ATOM 109 C "C2'" . DT A 1 6 ? 3.570 -4.499 11.328 1.00 22.43 ? 6 DT A "C2'" 1
ATOM 110 C "C1'" . DT A 1 6 ? 4.252 -3.637 12.371 1.00 17.56 ? 6 DT A "C1'" 1
ATOM 111 N N1 . DT A 1 6 ? 5.671 -3.335 12.127 1.00 9.41 ? 6 DT A N1 1
ATOM 112 C C2 . DT A 1 6 ? 6.036 -2.016 12.144 1.00 9.92 ? 6 DT A C2 1
ATOM 113 O O2 . DT A 1 6 ? 5.245 -1.062 12.332 1.00 8.73 ? 6 DT A O2 1
ATOM 114 N N3 . DT A 1 6 ? 7.368 -1.813 11.921 1.00 5.78 ? 6 DT A N3 1
ATOM 115 C C4 . DT A 1 6 ? 8.337 -2.709 11.697 1.00 7.15 ? 6 DT A C4 1
ATOM 116 O O4 . DT A 1 6 ? 9.479 -2.319 11.539 1.00 7.48 ? 6 DT A O4 1
ATOM 117 C C5 . DT A 1 6 ? 7.912 -4.051 11.685 1.00 6.40 ? 6 DT A C5 1
ATOM 118 C C7 . DT A 1 6 ? 8.947 -5.102 11.468 1.00 6.42 ? 6 DT A C7 1
ATOM 119 C C6 . DT A 1 6 ? 6.599 -4.311 11.892 1.00 6.32 ? 6 DT A C6 1
ATOM 120 P P . DT A 1 7 ? 0.552 -4.889 11.020 1.00 30.31 ? 7 DT A P 1
ATOM 121 O OP1 . DT A 1 7 ? -0.894 -4.704 11.419 1.00 27.58 ? 7 DT A OP1 1
ATOM 122 O OP2 . DT A 1 7 ? 0.979 -6.083 10.194 1.00 28.55 ? 7 DT A OP2 1
ATOM 123 O "O5'" . DT A 1 7 ? 0.999 -3.500 10.369 1.00 26.52 ? 7 DT A "O5'" 1
ATOM 124 C "C5'" . DT A 1 7 ? 0.572 -2.322 11.011 1.00 25.09 ? 7 DT A "C5'" 1
ATOM 125 C "C4'" . DT A 1 7 ? 0.917 -1.104 10.204 1.00 25.40 ? 7 DT A "C4'" 1
ATOM 126 O "O4'" . DT A 1 7 ? 2.345 -0.880 10.130 1.00 24.79 ? 7 DT A "O4'" 1
ATOM 127 C "C3'" . DT A 1 7 ? 0.434 -1.094 8.763 1.00 26.01 ? 7 DT A "C3'" 1
ATOM 128 O "O3'" . DT A 1 7 ? 0.111 0.292 8.492 1.00 29.14 ? 7 DT A "O3'" 1
ATOM 129 C "C2'" . DT A 1 7 ? 1.690 -1.539 8.020 1.00 22.53 ? 7 DT A "C2'" 1
ATOM 130 C "C1'" . DT A 1 7 ? 2.725 -0.739 8.775 1.00 16.60 ? 7 DT A "C1'" 1
ATOM 131 N N1 . DT A 1 7 ? 4.118 -1.163 8.678 1.00 8.83 ? 7 DT A N1 1
ATOM 132 C C2 . DT A 1 7 ? 4.997 -0.149 8.713 1.00 6.53 ? 7 DT A C2 1
ATOM 133 O O2 . DT A 1 7 ? 4.622 0.984 8.821 1.00 13.34 ? 7 DT A O2 1
ATOM 134 N N3 . DT A 1 7 ? 6.297 -0.473 8.637 1.00 3.18 ? 7 DT A N3 1
ATOM 135 C C4 . DT A 1 7 ? 6.805 -1.743 8.533 1.00 7.16 ? 7 DT A C4 1
ATOM 136 O O4 . DT A 1 7 ? 8.046 -1.899 8.485 1.00 8.05 ? 7 DT A O4 1
ATOM 137 C C5 . DT A 1 7 ? 5.789 -2.813 8.484 1.00 4.82 ? 7 DT A C5 1
ATOM 138 C C7 . DT A 1 7 ? 6.218 -4.223 8.298 1.00 2.98 ? 7 DT A C7 1
ATOM 139 C C6 . DT A 1 7 ? 4.512 -2.467 8.577 1.00 6.16 ? 7 DT A C6 1
ATOM 140 P P . DG A 1 8 ? -1.208 0.670 7.658 1.00 29.66 ? 8 DG A P 1
ATOM 141 O OP1 . DG A 1 8 ? -2.163 1.574 8.373 1.00 29.48 ? 8 DG A OP1 1
ATOM 142 O OP2 . DG A 1 8 ? -1.704 -0.621 7.082 1.00 25.77 ? 8 DG A OP2 1
ATOM 143 O "O5'" . DG A 1 8 ? -0.589 1.633 6.571 1.00 27.80 ? 8 DG A "O5'" 1
ATOM 144 C "C5'" . DG A 1 8 ? 0.230 2.753 6.950 1.00 24.47 ? 8 DG A "C5'" 1
ATOM 145 C "C4'" . DG A 1 8 ? 1.002 3.225 5.734 1.00 24.08 ? 8 DG A "C4'" 1
ATOM 146 O "O4'" . DG A 1 8 ? 2.342 2.637 5.703 1.00 19.81 ? 8 DG A "O4'" 1
ATOM 147 C "C3'" . DG A 1 8 ? 0.338 2.678 4.472 1.00 23.68 ? 8 DG A "C3'" 1
ATOM 148 O "O3'" . DG A 1 8 ? 0.747 3.426 3.348 1.00 25.56 ? 8 DG A "O3'" 1
ATOM 149 C "C2'" . DG A 1 8 ? 0.998 1.314 4.406 1.00 18.76 ? 8 DG A "C2'" 1
ATOM 150 C "C1'" . DG A 1 8 ? 2.410 1.761 4.633 1.00 12.55 ? 8 DG A "C1'" 1
ATOM 151 N N9 . DG A 1 8 ? 3.328 0.694 4.945 1.00 8.92 ? 8 DG A N9 1
ATOM 152 C C8 . DG A 1 8 ? 3.001 -0.646 5.034 1.00 7.85 ? 8 DG A C8 1
ATOM 153 N N7 . DG A 1 8 ? 4.055 -1.414 5.119 1.00 3.72 ? 8 DG A N7 1
ATOM 154 C C5 . DG A 1 8 ? 5.120 -0.530 5.148 1.00 2.00 ? 8 DG A C5 1
ATOM 155 C C6 . DG A 1 8 ? 6.428 -0.826 5.210 1.00 4.62 ? 8 DG A C6 1
ATOM 156 O O6 . DG A 1 8 ? 6.923 -2.004 5.218 1.00 7.45 ? 8 DG A O6 1
ATOM 157 N N1 . DG A 1 8 ? 7.235 0.330 5.246 1.00 2.00 ? 8 DG A N1 1
ATOM 158 C C2 . DG A 1 8 ? 6.745 1.611 5.185 1.00 4.64 ? 8 DG A C2 1
ATOM 159 N N2 . DG A 1 8 ? 7.678 2.610 5.193 1.00 2.00 ? 8 DG A N2 1
ATOM 160 N N3 . DG A 1 8 ? 5.429 1.893 5.109 1.00 2.00 ? 8 DG A N3 1
ATOM 161 C C4 . DG A 1 8 ? 4.698 0.774 5.093 1.00 2.00 ? 8 DG A C4 1
ATOM 162 P P . DC A 1 9 ? 0.157 4.896 3.095 1.00 29.72 ? 9 DC A P 1
ATOM 163 O OP1 . DC A 1 9 ? -0.020 5.749 4.287 1.00 30.81 ? 9 DC A OP1 1
ATOM 164 O OP2 . DC A 1 9 ? -1.021 4.660 2.201 1.00 27.37 ? 9 DC A OP2 1
ATOM 165 O "O5'" . DC A 1 9 ? 1.399 5.553 2.343 1.00 25.94 ? 9 DC A "O5'" 1
ATOM 166 C "C5'" . DC A 1 9 ? 2.216 6.475 3.017 1.00 22.23 ? 9 DC A "C5'" 1
ATOM 167 C "C4'" . DC A 1 9 ? 3.567 6.578 2.352 1.00 20.31 ? 9 DC A "C4'" 1
ATOM 168 O "O4'" . DC A 1 9 ? 4.227 5.316 2.497 1.00 18.97 ? 9 DC A "O4'" 1
ATOM 169 C "C3'" . DC A 1 9 ? 3.563 6.866 0.856 1.00 20.88 ? 9 DC A "C3'" 1
ATOM 170 O "O3'" . DC A 1 9 ? 4.610 7.790 0.593 1.00 23.84 ? 9 DC A "O3'" 1
ATOM 171 C "C2'" . DC A 1 9 ? 3.804 5.497 0.234 1.00 17.30 ? 9 DC A "C2'" 1
ATOM 172 C "C1'" . DC A 1 9 ? 4.685 4.831 1.271 1.00 11.93 ? 9 DC A "C1'" 1
ATOM 173 N N1 . DC A 1 9 ? 4.654 3.368 1.372 1.00 4.76 ? 9 DC A N1 1
ATOM 174 C C2 . DC A 1 9 ? 5.819 2.739 1.632 1.00 4.41 ? 9 DC A C2 1
ATOM 175 O O2 . DC A 1 9 ? 6.811 3.444 1.804 1.00 6.63 ? 9 DC A O2 1
ATOM 176 N N3 . DC A 1 9 ? 5.873 1.386 1.732 1.00 2.00 ? 9 DC A N3 1
ATOM 177 C C4 . DC A 1 9 ? 4.769 0.683 1.627 1.00 2.00 ? 9 DC A C4 1
ATOM 178 N N4 . DC A 1 9 ? 4.850 -0.662 1.762 1.00 2.00 ? 9 DC A N4 1
ATOM 179 C C5 . DC A 1 9 ? 3.518 1.310 1.380 1.00 2.01 ? 9 DC A C5 1
ATOM 180 C C6 . DC A 1 9 ? 3.510 2.654 1.242 1.00 4.81 ? 9 DC A C6 1
ATOM 181 P P . DG A 1 10 ? 4.611 8.633 -0.775 1.00 27.69 ? 10 DG A P 1
ATOM 182 O OP1 . DG A 1 10 ? 6.031 9.078 -0.969 1.00 27.63 ? 10 DG A OP1 1
ATOM 183 O OP2 . DG A 1 10 ? 3.500 9.642 -0.838 1.00 22.71 ? 10 DG A OP2 1
ATOM 184 O "O5'" . DG A 1 10 ? 4.454 7.485 -1.869 1.00 29.57 ? 10 DG A "O5'" 1
ATOM 185 C "C5'" . DG A 1 10 ? 5.489 6.494 -1.973 1.00 29.63 ? 10 DG A "C5'" 1
ATOM 186 C "C4'" . DG A 1 10 ? 5.316 5.640 -3.208 1.00 28.81 ? 10 DG A "C4'" 1
ATOM 187 O "O4'" . DG A 1 10 ? 3.947 5.204 -3.433 1.00 26.82 ? 10 DG A "O4'" 1
ATOM 188 C "C3'" . DG A 1 10 ? 5.734 6.310 -4.505 1.00 27.29 ? 10 DG A "C3'" 1
ATOM 189 O "O3'" . DG A 1 10 ? 6.179 5.052 -5.098 1.00 30.87 ? 10 DG A "O3'" 1
ATOM 190 C "C2'" . DG A 1 10 ? 4.430 6.955 -4.972 1.00 23.53 ? 10 DG A "C2'" 1
ATOM 191 C "C1'" . DG A 1 10 ? 3.321 6.061 -4.379 1.00 21.08 ? 10 DG A "C1'" 1
ATOM 192 N N9 . DG A 1 10 ? 2.332 6.489 -3.694 1.00 16.80 ? 10 DG A N9 1
ATOM 193 C C8 . DG A 1 10 ? 1.827 7.767 -3.816 1.00 15.84 ? 10 DG A C8 1
ATOM 194 N N7 . DG A 1 10 ? 0.812 8.000 -3.036 1.00 12.96 ? 10 DG A N7 1
ATOM 195 C C5 . DG A 1 10 ? 0.626 6.799 -2.355 1.00 16.44 ? 10 DG A C5 1
ATOM 196 C C6 . DG A 1 10 ? -0.368 6.400 -1.358 1.00 17.48 ? 10 DG A C6 1
ATOM 197 O O6 . DG A 1 10 ? -1.247 7.105 -0.806 1.00 17.32 ? 10 DG A O6 1
ATOM 198 N N1 . DG A 1 10 ? -0.236 5.043 -1.012 1.00 15.69 ? 10 DG A N1 1
ATOM 199 C C2 . DG A 1 10 ? 0.740 4.196 -1.500 1.00 18.08 ? 10 DG A C2 1
ATOM 200 N N2 . DG A 1 10 ? 0.702 2.931 -1.062 1.00 18.43 ? 10 DG A N2 1
ATOM 201 N N3 . DG A 1 10 ? 1.688 4.557 -2.372 1.00 17.77 ? 10 DG A N3 1
ATOM 202 C C4 . DG A 1 10 ? 1.559 5.855 -2.764 1.00 16.39 ? 10 DG A C4 1
HETATM 203 O O . HOH B 2 . ? 4.952 4.195 4.755 1.00 14.45 ? 11 HOH A O 1
HETATM 204 O O . HOH B 2 . ? 2.473 -3.847 5.663 1.00 32.77 ? 12 HOH A O 1
HETATM 205 O O . HOH B 2 . ? 11.066 -3.972 11.519 1.00 23.20 ? 13 HOH A O 1
HETATM 206 O O . HOH B 2 . ? 3.633 -7.744 9.796 1.00 46.22 ? 14 HOH A O 1
HETATM 207 O O . HOH B 2 . ? 14.494 -0.437 18.353 1.00 34.16 ? 15 HOH A O 1
HETATM 208 O O . HOH B 2 . ? 1.871 1.237 11.386 1.00 35.77 ? 16 HOH A O 1
HETATM 209 O O . HOH B 2 . ? 14.371 3.776 30.746 1.00 50.01 ? 17 HOH A O 1
HETATM 210 O O . HOH B 2 . ? -0.188 -2.046 5.465 1.00 43.60 ? 18 HOH A O 1
HETATM 211 O O . HOH B 2 . ? -2.378 4.131 8.581 1.00 40.88 ? 19 HOH A O 1
HETATM 212 O O . HOH B 2 . ? -4.261 -1.709 8.671 1.00 49.81 ? 20 HOH A O 1
HETATM 213 O O . HOH B 2 . ? 11.942 -11.220 15.488 1.00 20.57 ? 21 HOH A O 1
HETATM 214 O O . HOH B 2 . ? 18.180 -7.201 18.381 1.00 30.20 ? 22 HOH A O 1
HETATM 215 O O . HOH B 2 . ? -1.073 2.280 1.744 1.00 47.54 ? 23 HOH A O 1
HETATM 216 O O . HOH B 2 . ? 1.172 -9.926 13.215 1.00 23.81 ? 24 HOH A O 1
HETATM 217 O O . HOH B 2 . ? 4.123 6.542 5.772 1.00 31.09 ? 25 HOH A O 1
HETATM 218 O O . HOH B 2 . ? 13.899 8.471 23.980 1.00 41.73 ? 26 HOH A O 1
HETATM 219 O O . HOH B 2 . ? 8.854 -9.948 13.207 1.00 49.83 ? 27 HOH A O 1
HETATM 220 O O . HOH B 2 . ? -4.035 4.820 0.956 1.00 28.57 ? 28 HOH A O 1
HETATM 221 O O . HOH B 2 . ? 16.078 6.137 30.565 1.00 46.02 ? 29 HOH A O 1
HETATM 222 O O . HOH B 2 . ? 11.791 4.677 21.066 1.00 40.61 ? 30 HOH A O 1
HETATM 223 O O . HOH B 2 . ? 13.578 4.105 18.721 1.00 36.10 ? 31 HOH A O 1
HETATM 224 O O . HOH B 2 . ? 21.012 -3.126 25.782 1.00 23.41 ? 32 HOH A O 1
HETATM 225 O O . HOH B 2 . ? -4.399 2.331 10.604 1.00 47.51 ? 33 HOH A O 1
HETATM 226 O O . HOH B 2 . ? 11.989 -8.632 12.857 1.00 41.81 ? 34 HOH A O 1
HETATM 227 O O . HOH B 2 . ? 7.990 11.124 -0.282 1.00 34.21 ? 35 HOH A O 1
HETATM 228 O O . HOH B 2 . ? 14.900 9.354 27.200 1.00 47.37 ? 36 HOH A O 1
HETATM 229 O O . HOH B 2 . ? 14.434 8.827 30.525 1.00 43.49 ? 37 HOH A O 1
HETATM 230 O O . HOH B 2 . ? -1.717 -2.077 11.671 1.00 49.24 ? 38 HOH A O 1
HETATM 231 O O . HOH B 2 . ? 17.857 -6.294 22.794 1.00 41.09 ? 39 HOH A O 1
HETATM 232 O O . HOH B 2 . ? 18.215 -3.385 25.551 1.00 28.35 ? 40 HOH A O 1
HETATM 233 O O . HOH B 2 . ? 16.376 3.610 23.724 1.00 42.09 ? 41 HOH A O 1
HETATM 234 O O . HOH B 2 . ? 14.257 4.877 22.996 1.00 36.43 ? 42 HOH A O 1
HETATM 235 O O . HOH B 2 . ? 4.082 2.848 11.151 1.00 35.19 ? 43 HOH A O 1
HETATM 236 O O . HOH B 2 . ? 1.259 9.728 2.919 1.00 27.29 ? 44 HOH A O 1
HETATM 237 O O . HOH B 2 . ? 4.727 3.571 7.744 1.00 41.88 ? 45 HOH A O 1
HETATM 238 O O . HOH B 2 . ? -3.535 6.180 -1.423 1.00 23.77 ? 46 HOH A O 1
HETATM 239 O O . HOH B 2 . ? 6.432 4.640 -8.159 1.00 47.10 ? 47 HOH A O 1
HETATM 240 O O . HOH B 2 . ? 10.306 6.032 31.267 1.00 39.95 ? 48 HOH A O 1
HETATM 241 O O . HOH B 2 . ? 19.906 -4.711 17.164 1.00 33.87 ? 49 HOH A O 1
HETATM 242 O O . HOH B 2 . ? 1.448 4.055 11.079 1.00 41.76 ? 50 HOH A O 1
HETATM 243 O O . HOH B 2 . ? 4.787 -3.678 4.477 1.00 21.71 ? 51 HOH A O 1
HETATM 244 O O . HOH B 2 . ? 18.312 -1.994 22.283 1.00 43.49 ? 52 HOH A O 1
HETATM 245 O O . HOH B 2 . ? 15.864 8.367 33.194 1.00 37.81 ? 53 HOH A O 1
HETATM 246 O O . HOH B 2 . ? 18.356 -3.917 20.622 1.00 43.43 ? 54 HOH A O 1
HETATM 247 O O . HOH B 2 . ? -2.815 -3.709 9.155 1.00 48.07 ? 55 HOH A O 1
HETATM 248 O O . HOH B 2 . ? -1.897 9.533 8.193 1.00 38.22 ? 56 HOH A O 1
HETATM 249 O O . HOH B 2 . ? 1.309 9.493 5.569 1.00 45.52 ? 57 HOH A O 1
HETATM 250 O O . HOH B 2 . ? 1.309 10.409 -2.306 1.00 6.90 ? 58 HOH A O 1
#