data_231D
#
_entry.id 231D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 231D pdb_0000231d 10.2210/pdb231d/pdb
RCSB DDF060 ? ?
WWPDB D_1000177613 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1996-03-22
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-14
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 231D
_pdbx_database_status.recvd_initial_deposition_date 1995-08-25
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Lipscomb, L.A.' 1
'Zhou, F.X.' 2
'Presnell, S.R.' 3
'Woo, R.J.' 4
'Peek, M.E.' 5
'Plaskon, R.R.' 6
'Williams, L.D.' 7
#
_citation.id primary
_citation.title 'Structure of DNA-porphyrin complex.'
_citation.journal_abbrev Biochemistry
_citation.journal_volume 35
_citation.page_first 2818
_citation.page_last 2823
_citation.year 1996
_citation.journal_id_ASTM BICHAW
_citation.country US
_citation.journal_id_ISSN 0006-2960
_citation.journal_id_CSD 0033
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 8608116
_citation.pdbx_database_id_DOI 10.1021/bi952443z
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Lipscomb, L.A.' 1 ?
primary 'Zhou, F.X.' 2 ?
primary 'Presnell, S.R.' 3 ?
primary 'Woo, R.J.' 4 ?
primary 'Peek, M.E.' 5 ?
primary 'Plaskon, R.R.' 6 ?
primary 'Williams, L.D.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
;
1809.217 1 ? ? ? ?
2 non-polymer syn 'CU(II)MESO(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN' 740.356 1 ? ? ? ?
3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ?
4 water nat water 18.015 29 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGATCG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'CU(II)MESO(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN' PCU
3 'SODIUM ION' NA
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DA n
1 4 DT n
1 5 DC n
1 6 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990
PCU non-polymer . 'CU(II)MESO(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN' ? 'C44 H36 Cu N8' 740.356
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DA 3 3 3 DA A A . n
A 1 4 DT 4 4 4 DT T A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DG 6 6 6 DG G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PCU 1 7 7 PCU PCU A .
C 3 NA 1 8 8 NA NA A .
D 4 HOH 1 9 9 HOH HOH A .
D 4 HOH 2 10 10 HOH HOH A .
D 4 HOH 3 11 11 HOH HOH A .
D 4 HOH 4 12 12 HOH HOH A .
D 4 HOH 5 13 13 HOH HOH A .
D 4 HOH 6 14 14 HOH HOH A .
D 4 HOH 7 15 15 HOH HOH A .
D 4 HOH 8 16 16 HOH HOH A .
D 4 HOH 9 17 17 HOH HOH A .
D 4 HOH 10 18 18 HOH HOH A .
D 4 HOH 11 19 19 HOH HOH A .
D 4 HOH 12 20 20 HOH HOH A .
D 4 HOH 13 21 21 HOH HOH A .
D 4 HOH 14 22 22 HOH HOH A .
D 4 HOH 15 23 23 HOH HOH A .
D 4 HOH 16 24 24 HOH HOH A .
D 4 HOH 17 25 25 HOH HOH A .
D 4 HOH 18 26 26 HOH HOH A .
D 4 HOH 19 27 27 HOH HOH A .
D 4 HOH 20 28 28 HOH HOH A .
D 4 HOH 21 29 29 HOH HOH A .
D 4 HOH 22 30 30 HOH HOH A .
D 4 HOH 23 31 31 HOH HOH A .
D 4 HOH 24 32 32 HOH HOH A .
D 4 HOH 25 33 33 HOH HOH A .
D 4 HOH 26 34 34 HOH HOH A .
D 4 HOH 27 35 35 HOH HOH A .
D 4 HOH 28 36 36 HOH HOH A .
D 4 HOH 29 37 37 HOH HOH A .
#
_software.name X-PLOR
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 231D
_cell.length_a 39.490
_cell.length_b 39.490
_cell.length_c 56.150
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 231D
_symmetry.space_group_name_H-M 'P 61 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 178
#
_exptl.entry_id 231D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.49
_exptl_crystal.density_percent_sol 64.79
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION'
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.50
_exptl_crystal_grow.pdbx_details 'pH 6.50, VAPOR DIFFUSION'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 MPD ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 SPERMINE_HCL ? ? ?
1 5 1 'NA CACODYLATE' ? ? ?
1 6 2 WATER ? ? ?
1 7 2 MPD ? ? ?
1 8 3 WATER ? ? ?
1 9 3 K2PTCL4 ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 296.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'AREA DETECTOR'
_diffrn_detector.type SDMS
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 231D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low ?
_reflns.d_resolution_high 2.300
_reflns.number_obs 1334
_reflns.number_all 49552
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 231D
_refine.ls_number_reflns_obs 937
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.500
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.000
_refine.ls_d_res_high 2.400
_refine.ls_percent_reflns_obs 81.500
_refine.ls_R_factor_obs 0.2190000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.2190000
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 120
_refine_hist.pdbx_number_atoms_ligand 54
_refine_hist.number_atoms_solvent 29
_refine_hist.number_atoms_total 203
_refine_hist.d_res_high 2.400
_refine_hist.d_res_low 8.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 3.16 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 231D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 231D
_struct.title 'STRUCTURE OF A DNA-PORPHYRIN COMPLEX'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 231D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, FLIPPED-OUT BASES, COMPLEXED WITH DRUG, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 231D
_struct_ref.pdbx_db_accession 231D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 231D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 231D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 12_546 x,x-y-1,-z+7/6 0.5000000000 0.8660254038 0.0000000000 19.7450000000 0.8660254038
-0.5000000000 0.0000000000 -34.1993431954 0.0000000000 0.0000000000 -1.0000000000 65.5083333333
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? A DT 4 O2 ? ? ? 1_555 C NA . NA ? ? A DT 4 A NA 8 1_555 ? ? ? ? ? ? ? 2.416 ? ?
hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 3 A DT 4 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 3 A DT 4 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 4 A DA 3 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 4 A DA 3 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 12_546 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A PCU 7 ? 6 'BINDING SITE FOR RESIDUE PCU A 7'
AC2 Software A NA 8 ? 4 'BINDING SITE FOR RESIDUE NA A 8'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 6 DC A 1 ? DC A 1 . ? 2_545 ?
2 AC1 6 DG A 2 ? DG A 2 . ? 12_546 ?
3 AC1 6 DG A 2 ? DG A 2 . ? 2_545 ?
4 AC1 6 DC A 5 ? DC A 5 . ? 1_555 ?
5 AC1 6 DG A 6 ? DG A 6 . ? 1_555 ?
6 AC1 6 HOH D . ? HOH A 29 . ? 12_546 ?
7 AC2 4 DT A 4 ? DT A 4 . ? 12_546 ?
8 AC2 4 DT A 4 ? DT A 4 . ? 1_555 ?
9 AC2 4 HOH D . ? HOH A 13 . ? 1_555 ?
10 AC2 4 HOH D . ? HOH A 13 . ? 12_546 ?
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.50 108.30 2.20 0.30 N
2 1 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.03 118.90 4.13 0.60 N
3 1 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.85 121.90 -5.05 0.70 N
4 1 "O3'" A DC 1 ? ? P A DG 2 ? ? "O5'" A DG 2 ? ? 91.09 104.00 -12.91 1.90 Y
5 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 127.34 119.70 7.64 1.20 Y
6 1 "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? "C2'" A DA 3 ? ? 97.68 102.20 -4.52 0.70 N
7 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 113.10 108.30 4.80 0.30 N
8 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 114.40 108.30 6.10 0.30 N
9 1 N1 A DT 4 ? ? C2 A DT 4 ? ? N3 A DT 4 ? ? 118.31 114.60 3.71 0.60 N
10 1 C4 A DT 4 ? ? C5 A DT 4 ? ? C6 A DT 4 ? ? 121.73 118.00 3.73 0.60 N
11 1 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.53 122.30 -3.77 0.60 N
12 1 C5 A DT 4 ? ? C4 A DT 4 ? ? O4 A DT 4 ? ? 129.49 124.90 4.59 0.70 N
13 1 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 117.49 122.90 -5.41 0.60 N
14 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.36 108.30 4.06 0.30 N
15 1 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.15 102.20 -5.05 0.70 N
16 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.64 108.30 2.34 0.30 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A NA 8 ? C NA .
2 1 A HOH 36 ? D HOH .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
NA NA NA N N 147
PCU CU CU N N 148
PCU NA N Y N 149
PCU C1A C Y N 150
PCU C2A C Y N 151
PCU C3A C Y N 152
PCU C4A C Y N 153
PCU C5A C N N 154
PCU C6A C N N 155
PCU C7A C N N 156
PCU C8A C N N 157
PCU NPA N N N 158
PCU CMA C N N 159
PCU C9A C N N 160
PCU C0A C N N 161
PCU NB N Y N 162
PCU C1B C Y N 163
PCU C2B C Y N 164
PCU C3B C Y N 165
PCU C4B C Y N 166
PCU C5B C N N 167
PCU C6B C N N 168
PCU C7B C N N 169
PCU C8B C N N 170
PCU NPB N N N 171
PCU CMB C N N 172
PCU C9B C N N 173
PCU C0B C N N 174
PCU NC N Y N 175
PCU C1C C Y N 176
PCU C2C C Y N 177
PCU C3C C Y N 178
PCU C4C C Y N 179
PCU C5C C N N 180
PCU C6C C N N 181
PCU C7C C N N 182
PCU C8C C N N 183
PCU NPC N N N 184
PCU CMC C N N 185
PCU C9C C N N 186
PCU C0C C N N 187
PCU ND N Y N 188
PCU C1D C Y N 189
PCU C2D C Y N 190
PCU C3D C Y N 191
PCU C4D C Y N 192
PCU C5D C N N 193
PCU C6D C N N 194
PCU C7D C N N 195
PCU C8D C N N 196
PCU NPD N N N 197
PCU CMD C N N 198
PCU C9D C N N 199
PCU C0D C N N 200
PCU H2A H N N 201
PCU H3A H N N 202
PCU H7A H N N 203
PCU H8A H N N 204
PCU HMA1 H N N 205
PCU HMA2 H N N 206
PCU HMA3 H N N 207
PCU H9A H N N 208
PCU H0A H N N 209
PCU H2B H N N 210
PCU H3B H N N 211
PCU H7B H N N 212
PCU H8B H N N 213
PCU HMB1 H N N 214
PCU HMB2 H N N 215
PCU HMB3 H N N 216
PCU H9B H N N 217
PCU H0B H N N 218
PCU H2C H N N 219
PCU H3C H N N 220
PCU H7C H N N 221
PCU H8C H N N 222
PCU HMC1 H N N 223
PCU HMC2 H N N 224
PCU HMC3 H N N 225
PCU H9C H N N 226
PCU H0C H N N 227
PCU H2D H N N 228
PCU H3D H N N 229
PCU H7D H N N 230
PCU H8D H N N 231
PCU HMD1 H N N 232
PCU HMD2 H N N 233
PCU HMD3 H N N 234
PCU H9D H N N 235
PCU H0D H N N 236
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
PCU CU NA sing N N 152
PCU CU NB sing N N 153
PCU CU NC sing N N 154
PCU CU ND sing N N 155
PCU NA C1A sing Y N 156
PCU NA C4A sing Y N 157
PCU C1A C2A doub Y N 158
PCU C1A C5D sing N N 159
PCU C2A C3A sing Y N 160
PCU C2A H2A sing N N 161
PCU C3A C4A doub Y N 162
PCU C3A H3A sing N N 163
PCU C4A C5A sing N N 164
PCU C5A C6A doub N N 165
PCU C5A C1B sing N N 166
PCU C6A C7A sing N N 167
PCU C6A C0A sing N N 168
PCU C7A C8A doub N N 169
PCU C7A H7A sing N N 170
PCU C8A NPA sing N N 171
PCU C8A H8A sing N N 172
PCU NPA CMA sing N N 173
PCU NPA C9A sing N N 174
PCU CMA HMA1 sing N N 175
PCU CMA HMA2 sing N N 176
PCU CMA HMA3 sing N N 177
PCU C9A C0A doub N N 178
PCU C9A H9A sing N N 179
PCU C0A H0A sing N N 180
PCU NB C1B sing Y N 181
PCU NB C4B sing Y N 182
PCU C1B C2B doub Y N 183
PCU C2B C3B sing Y N 184
PCU C2B H2B sing N N 185
PCU C3B C4B doub Y N 186
PCU C3B H3B sing N N 187
PCU C4B C5B sing N N 188
PCU C5B C6B doub N N 189
PCU C5B C1C sing N N 190
PCU C6B C7B sing N N 191
PCU C6B C0B sing N N 192
PCU C7B C8B doub N N 193
PCU C7B H7B sing N N 194
PCU C8B NPB sing N N 195
PCU C8B H8B sing N N 196
PCU NPB CMB sing N N 197
PCU NPB C9B sing N N 198
PCU CMB HMB1 sing N N 199
PCU CMB HMB2 sing N N 200
PCU CMB HMB3 sing N N 201
PCU C9B C0B doub N N 202
PCU C9B H9B sing N N 203
PCU C0B H0B sing N N 204
PCU NC C1C sing Y N 205
PCU NC C4C sing Y N 206
PCU C1C C2C doub Y N 207
PCU C2C C3C sing Y N 208
PCU C2C H2C sing N N 209
PCU C3C C4C doub Y N 210
PCU C3C H3C sing N N 211
PCU C4C C5C sing N N 212
PCU C5C C6C doub N N 213
PCU C5C C1D sing N N 214
PCU C6C C7C sing N N 215
PCU C6C C0C sing N N 216
PCU C7C C8C doub N N 217
PCU C7C H7C sing N N 218
PCU C8C NPC sing N N 219
PCU C8C H8C sing N N 220
PCU NPC CMC sing N N 221
PCU NPC C9C sing N N 222
PCU CMC HMC1 sing N N 223
PCU CMC HMC2 sing N N 224
PCU CMC HMC3 sing N N 225
PCU C9C C0C doub N N 226
PCU C9C H9C sing N N 227
PCU C0C H0C sing N N 228
PCU ND C1D sing Y N 229
PCU ND C4D sing Y N 230
PCU C1D C2D doub Y N 231
PCU C2D C3D sing Y N 232
PCU C2D H2D sing N N 233
PCU C3D C4D doub Y N 234
PCU C3D H3D sing N N 235
PCU C4D C5D sing N N 236
PCU C5D C6D doub N N 237
PCU C6D C7D sing N N 238
PCU C6D C0D sing N N 239
PCU C7D C8D doub N N 240
PCU C7D H7D sing N N 241
PCU C8D NPD sing N N 242
PCU C8D H8D sing N N 243
PCU NPD CMD sing N N 244
PCU NPD C9D sing N N 245
PCU CMD HMD1 sing N N 246
PCU CMD HMD2 sing N N 247
PCU CMD HMD3 sing N N 248
PCU C9D C0D doub N N 249
PCU C9D H9D sing N N 250
PCU C0D H0D sing N N 251
#
_ndb_struct_conf_na.entry_id 231D
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 2 1_555 A DC 5 12_546 -0.105 -0.087 -0.142 -0.587 -12.310 2.973 1 A_DG2:DC5_A A 2 ? A 5 ? 19 1
1 A DA 3 1_555 A DT 4 12_546 0.088 -0.249 -0.346 8.684 -34.187 4.971 2 A_DA3:DT4_A A 3 ? A 4 ? 20 1
1 A DT 4 1_555 A DA 3 12_546 -0.088 -0.249 -0.346 -8.684 -34.187 4.971 3 A_DT4:DA3_A A 4 ? A 3 ? 20 1
1 A DC 5 1_555 A DG 2 12_546 0.105 -0.087 -0.142 0.587 -12.310 2.973 4 A_DC5:DG2_A A 5 ? A 2 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 2 1_555 A DC 5 12_546 A DA 3 1_555 A DT 4 12_546 -0.676 0.251 3.117 -0.019 7.146 36.129 -0.536 1.068 3.109 11.386 0.031
36.805 1 AA_DG2DA3:DT4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ?
1 A DA 3 1_555 A DT 4 12_546 A DT 4 1_555 A DA 3 12_546 0.000 0.139 3.659 0.000 1.521 32.058 -0.053 0.000 3.661 2.752 0.000
32.093 2 AA_DA3DT4:DA3DT4_AA A 3 ? A 4 ? A 4 ? A 3 ?
1 A DT 4 1_555 A DA 3 12_546 A DC 5 1_555 A DG 2 12_546 0.676 0.251 3.117 0.019 7.146 36.129 -0.536 -1.068 3.109 11.386 -0.031
36.805 3 AA_DT4DC5:DG2DA3_AA A 4 ? A 3 ? A 5 ? A 2 ?
#
_atom_sites.entry_id 231D
_atom_sites.fract_transf_matrix[1][1] 0.025323
_atom_sites.fract_transf_matrix[1][2] 0.014620
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.029240
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.017809
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CU
N
NA
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 14.892 -1.783 28.325 1.00 25.54 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 15.288 -3.140 28.684 1.00 29.11 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 15.258 -4.047 27.450 1.00 30.19 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 16.168 -3.578 26.449 1.00 34.55 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 15.511 -5.558 27.551 1.00 25.08 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 14.836 -6.085 26.412 1.00 25.16 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 16.985 -5.609 27.244 1.00 24.46 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 17.155 -4.569 26.155 1.00 24.72 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 18.502 -3.952 26.071 1.00 26.19 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 18.742 -2.592 26.326 1.00 23.16 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 17.869 -1.818 26.677 1.00 21.52 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 19.992 -2.093 26.218 1.00 25.76 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 20.986 -2.901 25.879 1.00 29.13 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 22.197 -2.392 25.751 1.00 32.14 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 20.786 -4.289 25.643 1.00 28.67 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 19.521 -4.757 25.718 1.00 27.45 ? 1 DC A C6 1
ATOM 17 P P . DG A 1 2 ? 13.232 -6.300 26.330 1.00 30.82 ? 2 DG A P 1
ATOM 18 O OP1 . DG A 1 2 ? 12.801 -6.601 24.943 1.00 31.29 ? 2 DG A OP1 1
ATOM 19 O OP2 . DG A 1 2 ? 12.500 -5.280 27.097 1.00 28.13 ? 2 DG A OP2 1
ATOM 20 O "O5'" . DG A 1 2 ? 13.335 -7.629 27.199 1.00 33.48 ? 2 DG A "O5'" 1
ATOM 21 C "C5'" . DG A 1 2 ? 12.907 -8.883 26.705 1.00 29.30 ? 2 DG A "C5'" 1
ATOM 22 C "C4'" . DG A 1 2 ? 11.383 -8.939 26.668 1.00 26.16 ? 2 DG A "C4'" 1
ATOM 23 O "O4'" . DG A 1 2 ? 11.090 -10.318 26.418 1.00 26.34 ? 2 DG A "O4'" 1
ATOM 24 C "C3'" . DG A 1 2 ? 10.695 -8.570 28.003 1.00 24.40 ? 2 DG A "C3'" 1
ATOM 25 O "O3'" . DG A 1 2 ? 9.279 -8.371 27.825 1.00 26.45 ? 2 DG A "O3'" 1
ATOM 26 C "C2'" . DG A 1 2 ? 10.958 -9.858 28.741 1.00 25.75 ? 2 DG A "C2'" 1
ATOM 27 C "C1'" . DG A 1 2 ? 10.804 -10.937 27.686 1.00 18.13 ? 2 DG A "C1'" 1
ATOM 28 N N9 . DG A 1 2 ? 11.676 -12.095 27.881 1.00 8.52 ? 2 DG A N9 1
ATOM 29 C C8 . DG A 1 2 ? 13.006 -12.175 28.127 1.00 6.63 ? 2 DG A C8 1
ATOM 30 N N7 . DG A 1 2 ? 13.455 -13.388 28.228 1.00 5.51 ? 2 DG A N7 1
ATOM 31 C C5 . DG A 1 2 ? 12.327 -14.147 27.998 1.00 3.38 ? 2 DG A C5 1
ATOM 32 C C6 . DG A 1 2 ? 12.165 -15.543 27.954 1.00 13.07 ? 2 DG A C6 1
ATOM 33 O O6 . DG A 1 2 ? 13.002 -16.429 28.129 1.00 17.66 ? 2 DG A O6 1
ATOM 34 N N1 . DG A 1 2 ? 10.864 -15.882 27.664 1.00 15.76 ? 2 DG A N1 1
ATOM 35 C C2 . DG A 1 2 ? 9.867 -14.990 27.450 1.00 12.95 ? 2 DG A C2 1
ATOM 36 N N2 . DG A 1 2 ? 8.689 -15.481 27.197 1.00 16.84 ? 2 DG A N2 1
ATOM 37 N N3 . DG A 1 2 ? 9.983 -13.690 27.556 1.00 9.30 ? 2 DG A N3 1
ATOM 38 C C4 . DG A 1 2 ? 11.252 -13.352 27.796 1.00 3.00 ? 2 DG A C4 1
ATOM 39 P P . DA A 1 3 ? 8.214 -7.841 28.927 1.00 34.38 ? 3 DA A P 1
ATOM 40 O OP1 . DA A 1 3 ? 7.231 -7.021 28.172 1.00 36.11 ? 3 DA A OP1 1
ATOM 41 O OP2 . DA A 1 3 ? 8.912 -7.281 30.109 1.00 34.32 ? 3 DA A OP2 1
ATOM 42 O "O5'" . DA A 1 3 ? 7.448 -9.163 29.435 1.00 33.85 ? 3 DA A "O5'" 1
ATOM 43 C "C5'" . DA A 1 3 ? 6.332 -9.688 28.687 1.00 35.53 ? 3 DA A "C5'" 1
ATOM 44 C "C4'" . DA A 1 3 ? 5.585 -10.865 29.354 1.00 35.32 ? 3 DA A "C4'" 1
ATOM 45 O "O4'" . DA A 1 3 ? 6.433 -12.044 29.406 1.00 33.36 ? 3 DA A "O4'" 1
ATOM 46 C "C3'" . DA A 1 3 ? 5.171 -10.494 30.790 1.00 35.05 ? 3 DA A "C3'" 1
ATOM 47 O "O3'" . DA A 1 3 ? 3.949 -11.165 31.172 1.00 41.50 ? 3 DA A "O3'" 1
ATOM 48 C "C2'" . DA A 1 3 ? 6.401 -11.052 31.508 1.00 33.82 ? 3 DA A "C2'" 1
ATOM 49 C "C1'" . DA A 1 3 ? 6.723 -12.334 30.774 1.00 26.82 ? 3 DA A "C1'" 1
ATOM 50 N N9 . DA A 1 3 ? 8.111 -12.788 30.988 1.00 20.22 ? 3 DA A N9 1
ATOM 51 C C8 . DA A 1 3 ? 9.219 -12.072 31.384 1.00 21.90 ? 3 DA A C8 1
ATOM 52 N N7 . DA A 1 3 ? 10.299 -12.805 31.516 1.00 23.35 ? 3 DA A N7 1
ATOM 53 C C5 . DA A 1 3 ? 9.881 -14.099 31.128 1.00 26.03 ? 3 DA A C5 1
ATOM 54 C C6 . DA A 1 3 ? 10.543 -15.360 31.032 1.00 26.50 ? 3 DA A C6 1
ATOM 55 N N6 . DA A 1 3 ? 11.822 -15.579 31.288 1.00 27.15 ? 3 DA A N6 1
ATOM 56 N N1 . DA A 1 3 ? 9.838 -16.428 30.633 1.00 23.05 ? 3 DA A N1 1
ATOM 57 C C2 . DA A 1 3 ? 8.579 -16.207 30.296 1.00 27.28 ? 3 DA A C2 1
ATOM 58 N N3 . DA A 1 3 ? 7.817 -15.129 30.380 1.00 22.82 ? 3 DA A N3 1
ATOM 59 C C4 . DA A 1 3 ? 8.552 -14.074 30.791 1.00 21.24 ? 3 DA A C4 1
ATOM 60 P P . DT A 1 4 ? 3.319 -11.174 32.687 1.00 46.73 ? 4 DT A P 1
ATOM 61 O OP1 . DT A 1 4 ? 2.685 -9.864 32.957 1.00 40.68 ? 4 DT A OP1 1
ATOM 62 O OP2 . DT A 1 4 ? 4.315 -11.699 33.659 1.00 40.06 ? 4 DT A OP2 1
ATOM 63 O "O5'" . DT A 1 4 ? 2.124 -12.237 32.508 1.00 41.58 ? 4 DT A "O5'" 1
ATOM 64 C "C5'" . DT A 1 4 ? 2.254 -13.556 31.945 1.00 41.89 ? 4 DT A "C5'" 1
ATOM 65 C "C4'" . DT A 1 4 ? 3.106 -14.559 32.755 1.00 39.31 ? 4 DT A "C4'" 1
ATOM 66 O "O4'" . DT A 1 4 ? 4.533 -14.514 32.529 1.00 36.47 ? 4 DT A "O4'" 1
ATOM 67 C "C3'" . DT A 1 4 ? 2.827 -14.428 34.266 1.00 39.20 ? 4 DT A "C3'" 1
ATOM 68 O "O3'" . DT A 1 4 ? 1.739 -15.283 34.691 1.00 39.59 ? 4 DT A "O3'" 1
ATOM 69 C "C2'" . DT A 1 4 ? 4.180 -14.761 34.846 1.00 37.95 ? 4 DT A "C2'" 1
ATOM 70 C "C1'" . DT A 1 4 ? 5.089 -15.104 33.682 1.00 34.49 ? 4 DT A "C1'" 1
ATOM 71 N N1 . DT A 1 4 ? 6.496 -14.728 33.943 1.00 31.38 ? 4 DT A N1 1
ATOM 72 C C2 . DT A 1 4 ? 7.429 -15.740 33.917 1.00 29.65 ? 4 DT A C2 1
ATOM 73 O O2 . DT A 1 4 ? 7.163 -16.893 33.575 1.00 28.27 ? 4 DT A O2 1
ATOM 74 N N3 . DT A 1 4 ? 8.703 -15.451 34.288 1.00 24.37 ? 4 DT A N3 1
ATOM 75 C C4 . DT A 1 4 ? 9.172 -14.224 34.649 1.00 24.12 ? 4 DT A C4 1
ATOM 76 O O4 . DT A 1 4 ? 10.353 -14.139 34.935 1.00 15.70 ? 4 DT A O4 1
ATOM 77 C C5 . DT A 1 4 ? 8.136 -13.185 34.644 1.00 25.45 ? 4 DT A C5 1
ATOM 78 C C7 . DT A 1 4 ? 8.479 -11.743 34.983 1.00 29.86 ? 4 DT A C7 1
ATOM 79 C C6 . DT A 1 4 ? 6.866 -13.458 34.316 1.00 27.99 ? 4 DT A C6 1
ATOM 80 P P . DC A 1 5 ? 1.240 -15.504 36.221 1.00 46.67 ? 5 DC A P 1
ATOM 81 O OP1 . DC A 1 5 ? -0.104 -16.143 36.204 1.00 49.19 ? 5 DC A OP1 1
ATOM 82 O OP2 . DC A 1 5 ? 1.469 -14.257 37.003 1.00 41.85 ? 5 DC A OP2 1
ATOM 83 O "O5'" . DC A 1 5 ? 2.319 -16.596 36.684 1.00 36.40 ? 5 DC A "O5'" 1
ATOM 84 C "C5'" . DC A 1 5 ? 2.381 -17.942 36.238 1.00 20.87 ? 5 DC A "C5'" 1
ATOM 85 C "C4'" . DC A 1 5 ? 3.441 -18.674 37.043 1.00 19.31 ? 5 DC A "C4'" 1
ATOM 86 O "O4'" . DC A 1 5 ? 4.791 -18.206 36.802 1.00 18.09 ? 5 DC A "O4'" 1
ATOM 87 C "C3'" . DC A 1 5 ? 3.122 -18.513 38.516 1.00 18.31 ? 5 DC A "C3'" 1
ATOM 88 O "O3'" . DC A 1 5 ? 3.308 -19.744 39.211 1.00 26.07 ? 5 DC A "O3'" 1
ATOM 89 C "C2'" . DC A 1 5 ? 4.170 -17.546 38.963 1.00 17.55 ? 5 DC A "C2'" 1
ATOM 90 C "C1'" . DC A 1 5 ? 5.339 -17.869 38.081 1.00 17.84 ? 5 DC A "C1'" 1
ATOM 91 N N1 . DC A 1 5 ? 6.315 -16.772 38.000 1.00 15.47 ? 5 DC A N1 1
ATOM 92 C C2 . DC A 1 5 ? 7.633 -17.072 37.834 1.00 22.65 ? 5 DC A C2 1
ATOM 93 O O2 . DC A 1 5 ? 7.986 -18.233 37.639 1.00 31.59 ? 5 DC A O2 1
ATOM 94 N N3 . DC A 1 5 ? 8.560 -16.100 37.838 1.00 24.81 ? 5 DC A N3 1
ATOM 95 C C4 . DC A 1 5 ? 8.216 -14.828 37.928 1.00 20.60 ? 5 DC A C4 1
ATOM 96 N N4 . DC A 1 5 ? 9.158 -13.913 37.902 1.00 23.45 ? 5 DC A N4 1
ATOM 97 C C5 . DC A 1 5 ? 6.844 -14.476 38.028 1.00 23.64 ? 5 DC A C5 1
ATOM 98 C C6 . DC A 1 5 ? 5.957 -15.459 38.117 1.00 24.54 ? 5 DC A C6 1
ATOM 99 P P . DG A 1 6 ? 2.223 -20.211 40.286 1.00 19.78 ? 6 DG A P 1
ATOM 100 O OP1 . DG A 1 6 ? 1.926 -21.643 40.036 1.00 30.35 ? 6 DG A OP1 1
ATOM 101 O OP2 . DG A 1 6 ? 1.136 -19.196 40.271 1.00 23.49 ? 6 DG A OP2 1
ATOM 102 O "O5'" . DG A 1 6 ? 2.939 -20.213 41.706 1.00 21.04 ? 6 DG A "O5'" 1
ATOM 103 C "C5'" . DG A 1 6 ? 2.347 -19.433 42.746 1.00 24.56 ? 6 DG A "C5'" 1
ATOM 104 C "C4'" . DG A 1 6 ? 2.785 -19.888 44.108 1.00 23.23 ? 6 DG A "C4'" 1
ATOM 105 O "O4'" . DG A 1 6 ? 4.215 -19.776 44.209 1.00 22.53 ? 6 DG A "O4'" 1
ATOM 106 C "C3'" . DG A 1 6 ? 2.224 -18.972 45.173 1.00 22.27 ? 6 DG A "C3'" 1
ATOM 107 O "O3'" . DG A 1 6 ? 0.890 -19.276 45.565 1.00 28.07 ? 6 DG A "O3'" 1
ATOM 108 C "C2'" . DG A 1 6 ? 3.209 -19.310 46.247 1.00 21.94 ? 6 DG A "C2'" 1
ATOM 109 C "C1'" . DG A 1 6 ? 4.568 -19.359 45.535 1.00 16.64 ? 6 DG A "C1'" 1
ATOM 110 N N9 . DG A 1 6 ? 5.236 -18.045 45.506 1.00 10.16 ? 6 DG A N9 1
ATOM 111 C C8 . DG A 1 6 ? 4.648 -16.823 45.379 1.00 6.26 ? 6 DG A C8 1
ATOM 112 N N7 . DG A 1 6 ? 5.476 -15.840 45.339 1.00 11.93 ? 6 DG A N7 1
ATOM 113 C C5 . DG A 1 6 ? 6.723 -16.448 45.376 1.00 12.75 ? 6 DG A C5 1
ATOM 114 C C6 . DG A 1 6 ? 8.024 -15.879 45.368 1.00 14.05 ? 6 DG A C6 1
ATOM 115 O O6 . DG A 1 6 ? 8.351 -14.703 45.326 1.00 26.26 ? 6 DG A O6 1
ATOM 116 N N1 . DG A 1 6 ? 9.012 -16.803 45.420 1.00 13.82 ? 6 DG A N1 1
ATOM 117 C C2 . DG A 1 6 ? 8.783 -18.126 45.498 1.00 12.08 ? 6 DG A C2 1
ATOM 118 N N2 . DG A 1 6 ? 9.857 -18.852 45.608 1.00 9.68 ? 6 DG A N2 1
ATOM 119 N N3 . DG A 1 6 ? 7.580 -18.702 45.517 1.00 12.95 ? 6 DG A N3 1
ATOM 120 C C4 . DG A 1 6 ? 6.585 -17.801 45.460 1.00 11.33 ? 6 DG A C4 1
HETATM 121 CU CU . PCU B 2 . ? 10.539 -16.794 41.456 1.00 17.37 ? 7 PCU A CU 1
HETATM 122 N NA . PCU B 2 . ? 10.463 -14.756 41.320 1.00 25.09 ? 7 PCU A NA 1
HETATM 123 C C1A . PCU B 2 . ? 11.517 -13.885 41.109 1.00 26.46 ? 7 PCU A C1A 1
HETATM 124 C C2A . PCU B 2 . ? 11.000 -12.523 41.019 1.00 29.87 ? 7 PCU A C2A 1
HETATM 125 C C3A . PCU B 2 . ? 9.687 -12.582 41.154 1.00 32.36 ? 7 PCU A C3A 1
HETATM 126 C C4A . PCU B 2 . ? 9.334 -13.976 41.372 1.00 29.98 ? 7 PCU A C4A 1
HETATM 127 C C5A . PCU B 2 . ? 8.014 -14.425 41.526 1.00 29.79 ? 7 PCU A C5A 1
HETATM 128 C C6A . PCU B 2 . ? 6.908 -13.433 41.699 1.00 30.32 ? 7 PCU A C6A 1
HETATM 129 C C7A . PCU B 2 . ? 6.536 -12.960 42.954 1.00 29.13 ? 7 PCU A C7A 1
HETATM 130 C C8A . PCU B 2 . ? 5.555 -12.058 43.112 1.00 34.48 ? 7 PCU A C8A 1
HETATM 131 N NPA . PCU B 2 . ? 4.846 -11.479 42.004 1.00 39.49 ? 7 PCU A NPA 1
HETATM 132 C CMA . PCU B 2 . ? 3.831 -10.553 42.072 1.00 41.19 ? 7 PCU A CMA 1
HETATM 133 C C9A . PCU B 2 . ? 5.241 -11.960 40.748 1.00 34.43 ? 7 PCU A C9A 1
HETATM 134 C C0A . PCU B 2 . ? 6.239 -12.860 40.583 1.00 32.99 ? 7 PCU A C0A 1
HETATM 135 N NB . PCU B 2 . ? 8.526 -16.825 41.690 1.00 23.11 ? 7 PCU A NB 1
HETATM 136 C C1B . PCU B 2 . ? 7.667 -15.777 41.713 1.00 25.40 ? 7 PCU A C1B 1
HETATM 137 C C2B . PCU B 2 . ? 6.345 -16.275 41.880 1.00 23.67 ? 7 PCU A C2B 1
HETATM 138 C C3B . PCU B 2 . ? 6.429 -17.618 42.022 1.00 23.20 ? 7 PCU A C3B 1
HETATM 139 C C4B . PCU B 2 . ? 7.805 -17.993 41.916 1.00 22.78 ? 7 PCU A C4B 1
HETATM 140 C C5B . PCU B 2 . ? 8.345 -19.248 42.108 1.00 16.56 ? 7 PCU A C5B 1
HETATM 141 C C6B . PCU B 2 . ? 7.342 -20.355 42.098 1.00 11.19 ? 7 PCU A C6B 1
HETATM 142 C C7B . PCU B 2 . ? 6.835 -21.027 43.189 1.00 17.00 ? 7 PCU A C7B 1
HETATM 143 C C8B . PCU B 2 . ? 5.915 -22.041 42.982 1.00 22.24 ? 7 PCU A C8B 1
HETATM 144 N NPB . PCU B 2 . ? 5.428 -22.424 41.691 1.00 20.66 ? 7 PCU A NPB 1
HETATM 145 C CMB . PCU B 2 . ? 4.523 -23.405 41.430 1.00 24.52 ? 7 PCU A CMB 1
HETATM 146 C C9B . PCU B 2 . ? 5.989 -21.690 40.630 1.00 18.25 ? 7 PCU A C9B 1
HETATM 147 C C0B . PCU B 2 . ? 6.896 -20.712 40.808 1.00 18.09 ? 7 PCU A C0B 1
HETATM 148 N NC . PCU B 2 . ? 10.688 -18.835 41.737 1.00 13.95 ? 7 PCU A NC 1
HETATM 149 C C1C . PCU B 2 . ? 9.659 -19.710 41.932 1.00 14.12 ? 7 PCU A C1C 1
HETATM 150 C C2C . PCU B 2 . ? 10.167 -21.062 42.002 1.00 12.16 ? 7 PCU A C2C 1
HETATM 151 C C3C . PCU B 2 . ? 11.480 -20.981 41.937 1.00 10.61 ? 7 PCU A C3C 1
HETATM 152 C C4C . PCU B 2 . ? 11.832 -19.590 41.741 1.00 13.64 ? 7 PCU A C4C 1
HETATM 153 C C5C . PCU B 2 . ? 13.155 -19.143 41.545 1.00 16.44 ? 7 PCU A C5C 1
HETATM 154 C C6C . PCU B 2 . ? 14.271 -20.137 41.574 1.00 17.94 ? 7 PCU A C6C 1
HETATM 155 C C7C . PCU B 2 . ? 14.388 -21.087 40.515 1.00 24.35 ? 7 PCU A C7C 1
HETATM 156 C C8C . PCU B 2 . ? 15.375 -22.016 40.531 1.00 21.32 ? 7 PCU A C8C 1
HETATM 157 N NPC . PCU B 2 . ? 16.256 -22.169 41.604 1.00 25.53 ? 7 PCU A NPC 1
HETATM 158 C CMC . PCU B 2 . ? 17.236 -23.142 41.537 1.00 28.26 ? 7 PCU A CMC 1
HETATM 159 C C9C . PCU B 2 . ? 16.048 -21.258 42.685 1.00 22.71 ? 7 PCU A C9C 1
HETATM 160 C C0C . PCU B 2 . ? 15.075 -20.337 42.684 1.00 19.91 ? 7 PCU A C0C 1
HETATM 161 N ND . PCU B 2 . ? 12.638 -16.718 41.259 1.00 21.10 ? 7 PCU A ND 1
HETATM 162 C C1D . PCU B 2 . ? 13.504 -17.783 41.313 1.00 16.72 ? 7 PCU A C1D 1
HETATM 163 C C2D . PCU B 2 . ? 14.825 -17.263 41.122 1.00 16.18 ? 7 PCU A C2D 1
HETATM 164 C C3D . PCU B 2 . ? 14.748 -15.910 40.989 1.00 17.80 ? 7 PCU A C3D 1
HETATM 165 C C4D . PCU B 2 . ? 13.365 -15.547 41.080 1.00 23.30 ? 7 PCU A C4D 1
HETATM 166 C C5D . PCU B 2 . ? 12.810 -14.279 41.002 1.00 25.46 ? 7 PCU A C5D 1
HETATM 167 C C6D . PCU B 2 . ? 13.762 -13.131 40.749 1.00 26.83 ? 7 PCU A C6D 1
HETATM 168 C C7D . PCU B 2 . ? 14.120 -12.755 39.471 1.00 32.04 ? 7 PCU A C7D 1
HETATM 169 C C8D . PCU B 2 . ? 14.931 -11.665 39.278 1.00 32.25 ? 7 PCU A C8D 1
HETATM 170 N NPD . PCU B 2 . ? 15.432 -10.851 40.335 1.00 32.22 ? 7 PCU A NPD 1
HETATM 171 C CMD . PCU B 2 . ? 16.298 -9.675 40.143 1.00 37.97 ? 7 PCU A CMD 1
HETATM 172 C C9D . PCU B 2 . ? 14.973 -11.249 41.602 1.00 32.14 ? 7 PCU A C9D 1
HETATM 173 C C0D . PCU B 2 . ? 14.178 -12.316 41.817 1.00 32.59 ? 7 PCU A C0D 1
HETATM 174 NA NA . NA C 3 . ? 6.478 -19.059 32.754 0.50 23.05 ? 8 NA A NA 1
HETATM 175 O O . HOH D 4 . ? 15.104 -16.303 29.860 1.00 12.99 ? 9 HOH A O 1
HETATM 176 O O . HOH D 4 . ? 2.827 -3.475 39.458 1.00 25.61 ? 10 HOH A O 1
HETATM 177 O O . HOH D 4 . ? 12.384 -1.264 29.396 1.00 45.55 ? 11 HOH A O 1
HETATM 178 O O . HOH D 4 . ? 23.918 -5.389 26.072 1.00 2.00 ? 12 HOH A O 1
HETATM 179 O O . HOH D 4 . ? 7.160 -20.230 35.490 1.00 13.50 ? 13 HOH A O 1
HETATM 180 O O . HOH D 4 . ? 1.534 -12.933 43.700 1.00 26.47 ? 14 HOH A O 1
HETATM 181 O O . HOH D 4 . ? 4.053 -14.117 46.906 1.00 27.64 ? 15 HOH A O 1
HETATM 182 O O . HOH D 4 . ? 2.198 -21.176 49.157 1.00 8.81 ? 16 HOH A O 1
HETATM 183 O O . HOH D 4 . ? 17.650 -13.441 41.974 1.00 43.08 ? 17 HOH A O 1
HETATM 184 O O . HOH D 4 . ? 6.779 -1.737 22.516 1.00 26.00 ? 18 HOH A O 1
HETATM 185 O O . HOH D 4 . ? 4.080 -11.860 49.471 1.00 25.94 ? 19 HOH A O 1
HETATM 186 O O . HOH D 4 . ? 26.315 -28.605 46.618 1.00 52.68 ? 20 HOH A O 1
HETATM 187 O O . HOH D 4 . ? 8.203 -11.009 38.130 1.00 23.01 ? 21 HOH A O 1
HETATM 188 O O . HOH D 4 . ? -2.594 -14.435 42.990 1.00 22.18 ? 22 HOH A O 1
HETATM 189 O O . HOH D 4 . ? 7.160 -8.500 34.962 1.00 30.46 ? 23 HOH A O 1
HETATM 190 O O . HOH D 4 . ? -0.278 -5.480 32.560 1.00 52.14 ? 24 HOH A O 1
HETATM 191 O O . HOH D 4 . ? 2.072 -7.631 44.074 1.00 26.14 ? 25 HOH A O 1
HETATM 192 O O . HOH D 4 . ? 3.113 -23.359 44.509 1.00 23.88 ? 26 HOH A O 1
HETATM 193 O O . HOH D 4 . ? 10.490 -3.793 35.621 1.00 24.18 ? 27 HOH A O 1
HETATM 194 O O . HOH D 4 . ? 4.114 -2.263 25.140 1.00 30.64 ? 28 HOH A O 1
HETATM 195 O O . HOH D 4 . ? 5.695 -14.467 26.129 1.00 63.88 ? 29 HOH A O 1
HETATM 196 O O . HOH D 4 . ? 5.884 -1.592 39.650 1.00 25.33 ? 30 HOH A O 1
HETATM 197 O O . HOH D 4 . ? 0.062 -3.260 36.750 1.00 14.46 ? 31 HOH A O 1
HETATM 198 O O . HOH D 4 . ? 10.029 -3.120 30.850 1.00 48.92 ? 32 HOH A O 1
HETATM 199 O O . HOH D 4 . ? 26.802 -24.803 42.851 1.00 42.80 ? 33 HOH A O 1
HETATM 200 O O . HOH D 4 . ? -1.210 -11.074 32.472 1.00 44.96 ? 34 HOH A O 1
HETATM 201 O O . HOH D 4 . ? 2.119 2.561 26.900 1.00 39.42 ? 35 HOH A O 1
HETATM 202 O O . HOH D 4 . ? 0.000 -15.684 42.113 0.50 30.95 ? 36 HOH A O 1
HETATM 203 O O . HOH D 4 . ? 0.687 -5.926 40.902 1.00 52.77 ? 37 HOH A O 1
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