HEADER DNA-RNA HYBRID 18-JUL-95 217D
TITLE CRYSTAL STRUCTURES OF THE B-FORM DNA-RNA CHIMER (5'-D(*IP*)-R(*CP*)-
TITLE 2 D(*IP*)-R(*CP*)-D(*IP*CP*IP*C)-3') COMPLEXED WITH DISTAMYCIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA/RNA (5'-D(*IP*)-R(*CP*)-D(*IP*)-R(*CP*)-D(*IP*CP*IP*C)-
COMPND 3 3');
COMPND 4 CHAIN: A;
COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS B-DNA/RNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA-RNA
KEYWDS 2 HYBRID
EXPDTA X-RAY DIFFRACTION
AUTHOR X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
REVDAT 4 14-FEB-24 217D 1 REMARK LINK
REVDAT 3 24-FEB-09 217D 1 VERSN
REVDAT 2 01-APR-03 217D 1 JRNL
REVDAT 1 29-JAN-96 217D 0
JRNL AUTH X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
JRNL TITL CRYSTAL STRUCTURES OF B-FORM DNA-RNA CHIMERS COMPLEXED WITH
JRNL TITL 2 DISTAMYCIN.
JRNL REF NAT.STRUCT.BIOL. V. 2 733 1995
JRNL REFN ISSN 1072-8368
JRNL PMID 7552741
JRNL DOI 10.1038/NSB0995-733
REMARK 2
REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 2556
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING SET) : 0.159
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 159
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 45
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.014
REMARK 3 BOND ANGLES (DEGREES) : 3.400
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 217D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000177581.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 7.00
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : AREA DETECTOR
REMARK 200 DETECTOR MANUFACTURER : SIEMENS
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2794
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700
REMARK 200 RESOLUTION RANGE LOW (A) : NULL
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 45.20
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, VAPOR DIFFUSION, HANGING DROP
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y,X,Z+1/4
REMARK 290 4555 Y,-X,Z+3/4
REMARK 290 5555 -X,Y,-Z
REMARK 290 6555 X,-Y,-Z+1/2
REMARK 290 7555 Y,X,-Z+3/4
REMARK 290 8555 -Y,-X,-Z+1/4
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.85004
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.42502
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.27506
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.85004
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.27506
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 14.42502
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 28.85004
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 C A 2 N1 - C2 - O2 ANGL. DEV. = 4.2 DEGREES
REMARK 500 DI A 3 O3' - P - OP1 ANGL. DEV. = 8.8 DEGREES
REMARK 500 C A 4 O4' - C1' - C2' ANGL. DEV. = -6.9 DEGREES
REMARK 500 DC A 6 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES
REMARK 500 DC A 8 N1 - C2 - O2 ANGL. DEV. = 3.7 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 DI A 3 0.09 SIDE CHAIN
REMARK 500 DI A 5 0.07 SIDE CHAIN
REMARK 500 DC A 6 0.06 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 10 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 DC A 6 OP2
REMARK 620 2 HOH A 14 O 99.0
REMARK 620 3 HOH A 15 O 91.3 169.6
REMARK 620 4 HOH A 17 O 89.6 88.9 90.4
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMY A 9
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 10
DBREF 217D A 1 8 PDB 217D 217D 1 8
SEQRES 1 A 8 DI C DI C DI DC DI DC
HET DMY A 9 35
HET MG A 10 1
HETNAM DMY DISTAMYCIN A
HETNAM MG MAGNESIUM ION
HETSYN DMY DISTAMYCIN; STALLIMYCIN
FORMUL 2 DMY C22 H27 N9 O4
FORMUL 3 MG MG 2+
FORMUL 4 HOH *45(H2 O)
LINK OP2 DC A 6 MG MG A 10 1555 1555 2.05
LINK MG MG A 10 O HOH A 14 1555 1555 2.04
LINK MG MG A 10 O HOH A 15 1555 1555 2.04
LINK MG MG A 10 O HOH A 17 1555 1555 2.10
SITE 1 AC1 13 C A 2 DI A 3 C A 4 DI A 5
SITE 2 AC1 13 DC A 6 DI A 7 DC A 8 HOH A 12
SITE 3 AC1 13 HOH A 22 HOH A 28 HOH A 31 HOH A 35
SITE 4 AC1 13 HOH A 44
SITE 1 AC2 6 DC A 6 HOH A 11 HOH A 13 HOH A 14
SITE 2 AC2 6 HOH A 15 HOH A 17
CRYST1 27.930 27.930 57.470 90.00 90.00 90.00 P 41 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.035817 0.000000 0.000000 0.00000
SCALE2 0.000000 0.035817 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017331 0.00000
ATOM 1 O5' DI A 1 -0.916 14.715 18.020 1.00 10.13 O
ATOM 2 C5' DI A 1 -0.972 13.340 17.626 1.00 9.62 C
ATOM 3 C4' DI A 1 -0.539 13.206 16.168 1.00 9.46 C
ATOM 4 O4' DI A 1 0.842 13.567 16.022 1.00 9.31 O
ATOM 5 C3' DI A 1 -0.689 11.807 15.641 1.00 9.47 C
ATOM 6 O3' DI A 1 -1.151 11.926 14.292 1.00 9.52 O
ATOM 7 C2' DI A 1 0.744 11.257 15.756 1.00 9.21 C
ATOM 8 C1' DI A 1 1.604 12.458 15.483 1.00 9.14 C
ATOM 9 N9 DI A 1 2.915 12.337 16.137 1.00 8.97 N
ATOM 10 C8 DI A 1 3.219 12.407 17.482 1.00 8.96 C
ATOM 11 N7 DI A 1 4.503 12.335 17.736 1.00 8.81 N
ATOM 12 C5 DI A 1 5.094 12.311 16.478 1.00 8.82 C
ATOM 13 C6 DI A 1 6.471 12.288 16.128 1.00 8.77 C
ATOM 14 O6 DI A 1 7.446 12.268 16.875 1.00 8.87 O
ATOM 15 N1 DI A 1 6.646 12.263 14.743 1.00 8.76 N
ATOM 16 C2 DI A 1 5.624 12.223 13.821 1.00 8.70 C
ATOM 17 N3 DI A 1 4.332 12.242 14.159 1.00 8.69 N
ATOM 18 C4 DI A 1 4.138 12.302 15.502 1.00 8.89 C
ATOM 19 P C A 2 -1.546 10.604 13.470 1.00 10.04 P
ATOM 20 OP1 C A 2 -2.080 11.145 12.197 1.00 10.25 O
ATOM 21 OP2 C A 2 -2.418 9.777 14.324 1.00 10.44 O
ATOM 22 O5' C A 2 -0.250 9.718 13.124 1.00 9.98 O
ATOM 23 C5' C A 2 0.588 10.022 12.002 1.00 9.54 C
ATOM 24 C4' C A 2 1.791 9.112 11.986 1.00 9.53 C
ATOM 25 O4' C A 2 2.714 9.456 13.026 1.00 9.30 O
ATOM 26 C3' C A 2 1.395 7.635 12.253 1.00 9.60 C
ATOM 27 O3' C A 2 2.013 6.815 11.258 1.00 9.91 O
ATOM 28 C2' C A 2 1.987 7.380 13.645 1.00 9.28 C
ATOM 29 O2' C A 2 2.222 5.998 13.932 1.00 9.01 O
ATOM 30 C1' C A 2 3.221 8.217 13.518 1.00 9.13 C
ATOM 31 N1 C A 2 3.978 8.422 14.753 1.00 8.85 N
ATOM 32 C2 C A 2 5.348 8.623 14.608 1.00 8.64 C
ATOM 33 O2 C A 2 5.913 8.651 13.512 1.00 8.46 O
ATOM 34 N3 C A 2 6.087 8.829 15.737 1.00 8.52 N
ATOM 35 C4 C A 2 5.506 8.925 16.939 1.00 8.58 C
ATOM 36 N4 C A 2 6.294 9.145 17.994 1.00 8.46 N
ATOM 37 C5 C A 2 4.088 8.841 17.072 1.00 8.62 C
ATOM 38 C6 C A 2 3.358 8.587 15.963 1.00 8.79 C
ATOM 39 P DI A 3 1.299 6.576 9.853 1.00 10.68 P
ATOM 40 OP1 DI A 3 0.703 7.730 9.137 1.00 10.86 O
ATOM 41 OP2 DI A 3 0.465 5.393 10.195 1.00 10.95 O
ATOM 42 O5' DI A 3 2.508 6.033 8.993 1.00 10.31 O
ATOM 43 C5' DI A 3 3.299 6.845 8.142 1.00 10.08 C
ATOM 44 C4' DI A 3 4.530 6.071 7.742 1.00 9.79 C
ATOM 45 O4' DI A 3 5.442 5.979 8.846 1.00 9.60 O
ATOM 46 C3' DI A 3 4.202 4.652 7.322 1.00 9.78 C
ATOM 47 O3' DI A 3 5.052 4.408 6.208 1.00 10.06 O
ATOM 48 C2' DI A 3 4.558 3.851 8.579 1.00 9.56 C
ATOM 49 C1' DI A 3 5.652 4.639 9.255 1.00 9.40 C
ATOM 50 N9 DI A 3 5.552 4.616 10.717 1.00 9.15 N
ATOM 51 C8 DI A 3 4.434 4.820 11.471 1.00 9.16 C
ATOM 52 N7 DI A 3 4.639 5.011 12.740 1.00 9.02 N
ATOM 53 C5 DI A 3 6.021 5.024 12.842 1.00 9.05 C
ATOM 54 C6 DI A 3 6.845 5.231 13.987 1.00 9.01 C
ATOM 55 O6 DI A 3 6.499 5.475 15.148 1.00 8.92 O
ATOM 56 N1 DI A 3 8.196 5.118 13.655 1.00 8.85 N
ATOM 57 C2 DI A 3 8.701 4.807 12.409 1.00 8.94 C
ATOM 58 N3 DI A 3 7.914 4.545 11.352 1.00 9.01 N
ATOM 59 C4 DI A 3 6.589 4.715 11.618 1.00 9.07 C
ATOM 60 P C A 4 5.190 2.971 5.512 1.00 10.52 P
ATOM 61 OP1 C A 4 5.863 3.429 4.267 1.00 10.85 O
ATOM 62 OP2 C A 4 3.845 2.348 5.506 1.00 10.48 O
ATOM 63 O5' C A 4 6.217 2.073 6.346 1.00 9.92 O
ATOM 64 C5' C A 4 7.621 2.304 6.343 1.00 9.33 C
ATOM 65 C4' C A 4 8.258 1.393 7.358 1.00 8.98 C
ATOM 66 O4' C A 4 7.840 1.772 8.685 1.00 8.66 O
ATOM 67 C3' C A 4 7.800 -0.049 7.162 1.00 8.81 C
ATOM 68 O3' C A 4 8.946 -0.865 7.281 1.00 9.04 O
ATOM 69 C2' C A 4 6.875 -0.217 8.349 1.00 8.73 C
ATOM 70 O2' C A 4 6.630 -1.580 8.686 1.00 8.61 O
ATOM 71 C1' C A 4 7.641 0.571 9.407 1.00 8.58 C
ATOM 72 N1 C A 4 6.934 0.862 10.668 1.00 8.43 N
ATOM 73 C2 C A 4 7.698 1.140 11.795 1.00 8.37 C
ATOM 74 O2 C A 4 8.923 1.123 11.770 1.00 8.50 O
ATOM 75 N3 C A 4 7.080 1.423 12.961 1.00 8.34 N
ATOM 76 C4 C A 4 5.742 1.458 13.039 1.00 8.37 C
ATOM 77 N4 C A 4 5.169 1.828 14.180 1.00 8.25 N
ATOM 78 C5 C A 4 4.925 1.169 11.890 1.00 8.42 C
ATOM 79 C6 C A 4 5.569 0.918 10.731 1.00 8.45 C
ATOM 80 P DI A 5 9.482 -1.642 5.968 1.00 9.00 P
ATOM 81 OP1 DI A 5 9.572 -0.669 4.855 1.00 9.30 O
ATOM 82 OP2 DI A 5 8.770 -2.917 5.792 1.00 9.11 O
ATOM 83 O5' DI A 5 10.926 -1.983 6.514 1.00 8.87 O
ATOM 84 C5' DI A 5 11.990 -1.030 6.613 1.00 8.48 C
ATOM 85 C4' DI A 5 12.924 -1.410 7.738 1.00 8.23 C
ATOM 86 O4' DI A 5 12.192 -1.293 8.959 1.00 8.14 O
ATOM 87 C3' DI A 5 13.444 -2.827 7.670 1.00 8.06 C
ATOM 88 O3' DI A 5 14.840 -2.834 7.987 1.00 8.26 O
ATOM 89 C2' DI A 5 12.626 -3.577 8.692 1.00 8.02 C
ATOM 90 C1' DI A 5 12.217 -2.506 9.725 1.00 7.84 C
ATOM 91 N9 DI A 5 10.837 -2.710 10.169 1.00 7.71 N
ATOM 92 C8 DI A 5 9.760 -3.047 9.394 1.00 7.67 C
ATOM 93 N7 DI A 5 8.620 -2.954 9.999 1.00 7.75 N
ATOM 94 C5 DI A 5 8.952 -2.524 11.278 1.00 7.51 C
ATOM 95 C6 DI A 5 8.102 -2.254 12.383 1.00 7.59 C
ATOM 96 O6 DI A 5 6.869 -2.246 12.394 1.00 7.51 O
ATOM 97 N1 DI A 5 8.821 -1.933 13.533 1.00 7.35 N
ATOM 98 C2 DI A 5 10.183 -1.798 13.583 1.00 7.48 C
ATOM 99 N3 DI A 5 10.987 -2.038 12.520 1.00 7.45 N
ATOM 100 C4 DI A 5 10.304 -2.382 11.397 1.00 7.62 C
ATOM 101 P DC A 6 15.747 -4.147 7.892 1.00 8.15 P
ATOM 102 OP1 DC A 6 17.160 -3.770 7.690 1.00 8.45 O
ATOM 103 OP2 DC A 6 15.147 -5.209 7.066 1.00 8.55 O
ATOM 104 O5' DC A 6 15.611 -4.648 9.411 1.00 8.41 O
ATOM 105 C5' DC A 6 16.050 -3.816 10.491 1.00 8.57 C
ATOM 106 C4' DC A 6 15.498 -4.356 11.784 1.00 8.70 C
ATOM 107 O4' DC A 6 14.078 -4.322 11.790 1.00 8.59 O
ATOM 108 C3' DC A 6 15.918 -5.785 12.005 1.00 8.88 C
ATOM 109 O3' DC A 6 16.941 -5.729 12.991 1.00 9.28 O
ATOM 110 C2' DC A 6 14.623 -6.447 12.462 1.00 8.68 C
ATOM 111 C1' DC A 6 13.619 -5.341 12.684 1.00 8.55 C
ATOM 112 N1 DC A 6 12.209 -5.717 12.376 1.00 8.46 N
ATOM 113 C2 DC A 6 11.225 -5.428 13.324 1.00 8.43 C
ATOM 114 O2 DC A 6 11.531 -5.064 14.450 1.00 8.33 O
ATOM 115 N3 DC A 6 9.899 -5.547 12.982 1.00 8.26 N
ATOM 116 C4 DC A 6 9.541 -5.964 11.752 1.00 8.22 C
ATOM 117 N4 DC A 6 8.239 -6.103 11.459 1.00 8.07 N
ATOM 118 C5 DC A 6 10.538 -6.297 10.774 1.00 8.29 C
ATOM 119 C6 DC A 6 11.844 -6.151 11.126 1.00 8.47 C
ATOM 120 P DI A 7 17.620 -7.068 13.539 1.00 10.46 P
ATOM 121 OP1 DI A 7 18.829 -6.504 14.169 1.00 11.24 O
ATOM 122 OP2 DI A 7 17.770 -8.154 12.545 1.00 11.01 O
ATOM 123 O5' DI A 7 16.703 -7.714 14.688 1.00 10.36 O
ATOM 124 C5' DI A 7 16.434 -6.969 15.871 1.00 9.86 C
ATOM 125 C4' DI A 7 15.247 -7.540 16.552 1.00 9.62 C
ATOM 126 O4' DI A 7 14.139 -7.518 15.658 1.00 9.37 O
ATOM 127 C3' DI A 7 15.484 -8.982 16.937 1.00 9.66 C
ATOM 128 O3' DI A 7 15.242 -9.042 18.335 1.00 10.22 O
ATOM 129 C2' DI A 7 14.468 -9.722 16.107 1.00 9.33 C
ATOM 130 C1' DI A 7 13.383 -8.709 15.835 1.00 8.93 C
ATOM 131 N9 DI A 7 12.630 -8.995 14.604 1.00 8.52 N
ATOM 132 C8 DI A 7 13.120 -9.396 13.398 1.00 8.20 C
ATOM 133 N7 DI A 7 12.207 -9.511 12.479 1.00 8.10 N
ATOM 134 C5 DI A 7 11.024 -9.151 13.119 1.00 8.02 C
ATOM 135 C6 DI A 7 9.680 -9.173 12.634 1.00 7.94 C
ATOM 136 O6 DI A 7 9.265 -9.353 11.495 1.00 7.67 O
ATOM 137 N1 DI A 7 8.785 -8.893 13.642 1.00 7.77 N
ATOM 138 C2 DI A 7 9.119 -8.645 14.946 1.00 7.88 C
ATOM 139 N3 DI A 7 10.360 -8.601 15.402 1.00 7.96 N
ATOM 140 C4 DI A 7 11.272 -8.828 14.422 1.00 8.21 C
ATOM 141 P DC A 8 15.416 -10.405 19.149 1.00 10.71 P
ATOM 142 OP1 DC A 8 15.895 -9.802 20.405 1.00 11.15 O
ATOM 143 OP2 DC A 8 16.204 -11.466 18.476 1.00 11.06 O
ATOM 144 O5' DC A 8 13.951 -11.002 19.364 1.00 10.45 O
ATOM 145 C5' DC A 8 12.971 -10.266 20.111 1.00 9.79 C
ATOM 146 C4' DC A 8 11.636 -10.933 20.015 1.00 9.44 C
ATOM 147 O4' DC A 8 11.224 -10.877 18.647 1.00 9.20 O
ATOM 148 C3' DC A 8 11.760 -12.428 20.373 1.00 9.31 C
ATOM 149 O3' DC A 8 10.878 -12.750 21.435 1.00 9.44 O
ATOM 150 C2' DC A 8 11.349 -13.133 19.103 1.00 9.08 C
ATOM 151 C1' DC A 8 10.536 -12.088 18.354 1.00 8.88 C
ATOM 152 N1 DC A 8 10.533 -12.244 16.895 1.00 8.50 N
ATOM 153 C2 DC A 8 9.299 -12.242 16.251 1.00 8.40 C
ATOM 154 O2 DC A 8 8.238 -12.182 16.859 1.00 8.43 O
ATOM 155 N3 DC A 8 9.263 -12.289 14.901 1.00 8.09 N
ATOM 156 C4 DC A 8 10.392 -12.350 14.202 1.00 8.06 C
ATOM 157 N4 DC A 8 10.276 -12.446 12.875 1.00 7.94 N
ATOM 158 C5 DC A 8 11.695 -12.308 14.835 1.00 7.99 C
ATOM 159 C6 DC A 8 11.708 -12.293 16.184 1.00 8.27 C
TER 160 DC A 8
HETATM 161 C1 DMY A 9 10.426 -3.194 19.552 1.00 10.39 C
HETATM 162 O1 DMY A 9 11.033 -3.535 20.574 1.00 10.67 O
HETATM 163 N1 DMY A 9 10.842 -2.385 18.562 1.00 10.03 N
HETATM 164 C2 DMY A 9 12.040 -1.777 18.485 1.00 9.90 C
HETATM 165 C3 DMY A 9 12.456 -0.954 17.441 1.00 9.71 C
HETATM 166 C4 DMY A 9 13.747 -0.534 17.674 1.00 9.74 C
HETATM 167 N2 DMY A 9 14.158 -1.084 18.850 1.00 9.72 N
HETATM 168 C5 DMY A 9 13.163 -1.829 19.365 1.00 9.72 C
HETATM 169 C6 DMY A 9 15.517 -0.993 19.543 1.00 9.65 C
HETATM 170 C7 DMY A 9 14.589 0.260 16.806 1.00 9.63 C
HETATM 171 O2 DMY A 9 15.810 0.253 16.903 1.00 9.68 O
HETATM 172 N3 DMY A 9 13.899 1.035 15.923 1.00 9.59 N
HETATM 173 C8 DMY A 9 14.493 1.745 14.929 1.00 9.22 C
HETATM 174 C9 DMY A 9 13.842 2.565 14.016 1.00 9.08 C
HETATM 175 C10 DMY A 9 14.757 3.124 13.161 1.00 9.07 C
HETATM 176 N4 DMY A 9 15.977 2.647 13.490 1.00 9.10 N
HETATM 177 C11 DMY A 9 15.856 1.816 14.535 1.00 9.11 C
HETATM 178 C12 DMY A 9 17.339 2.967 12.865 1.00 9.12 C
HETATM 179 C13 DMY A 9 14.495 3.963 12.013 1.00 9.09 C
HETATM 180 O3 DMY A 9 15.286 4.061 11.080 1.00 8.85 O
HETATM 181 N5 DMY A 9 13.321 4.657 12.093 1.00 9.21 N
HETATM 182 C14 DMY A 9 12.801 5.408 11.082 1.00 9.29 C
HETATM 183 C15 DMY A 9 11.625 6.140 11.134 1.00 9.41 C
HETATM 184 C16 DMY A 9 11.407 6.754 9.911 1.00 9.62 C
HETATM 185 N6 DMY A 9 12.412 6.390 9.079 1.00 9.54 N
HETATM 186 C17 DMY A 9 13.267 5.603 9.748 1.00 9.38 C
HETATM 187 C18 DMY A 9 12.586 6.715 7.558 1.00 9.51 C
HETATM 188 C19 DMY A 9 10.281 7.545 9.489 1.00 9.66 C
HETATM 189 O4 DMY A 9 9.882 7.634 8.320 1.00 9.91 O
HETATM 190 N7 DMY A 9 9.686 8.235 10.477 1.00 9.64 N
HETATM 191 C20 DMY A 9 8.517 9.077 10.244 1.00 9.46 C
HETATM 192 C21 DMY A 9 7.214 8.320 10.206 1.00 9.40 C
HETATM 193 C22 DMY A 9 6.035 9.213 9.857 1.00 9.31 C
HETATM 194 N8 DMY A 9 5.744 9.542 8.598 1.00 9.23 N
HETATM 195 N9 DMY A 9 5.292 9.675 10.860 1.00 9.20 N
HETATM 196 MG MG A 10 14.060 -6.738 6.229 1.00 11.90 MG
HETATM 197 O HOH A 11 8.340 13.079 19.337 1.00 7.81 O
HETATM 198 O HOH A 12 3.811 12.133 11.232 1.00 8.17 O
HETATM 199 O HOH A 13 5.532 12.549 20.198 1.00 8.87 O
HETATM 200 O HOH A 14 13.026 -7.340 7.885 1.00 9.41 O
HETATM 201 O HOH A 15 14.931 -6.423 4.408 1.00 9.56 O
HETATM 202 O HOH A 16 6.952 -7.985 5.992 1.00 10.61 O
HETATM 203 O HOH A 17 15.586 -8.083 6.743 1.00 10.75 O
HETATM 204 O HOH A 18 5.363 9.837 20.690 1.00 11.71 O
HETATM 205 O HOH A 19 1.762 15.095 19.138 1.00 12.02 O
HETATM 206 O HOH A 20 10.311 1.924 4.179 1.00 14.35 O
HETATM 207 O HOH A 21 7.641 -0.375 2.747 1.00 16.26 O
HETATM 208 O HOH A 22 7.911 9.519 6.681 1.00 17.79 O
HETATM 209 O HOH A 23 13.065 -15.456 17.058 1.00 18.22 O
HETATM 210 O HOH A 24 10.192 -10.747 9.338 1.00 19.30 O
HETATM 211 O HOH A 25 13.850 -8.935 9.933 1.00 19.31 O
HETATM 212 O HOH A 26 8.397 -10.522 6.782 1.00 20.75 O
HETATM 213 O HOH A 27 12.878 -11.751 8.525 1.00 21.25 O
HETATM 214 O HOH A 28 12.171 3.107 5.771 1.00 21.74 O
HETATM 215 O HOH A 29 4.722 -3.099 10.727 1.00 23.58 O
HETATM 216 O HOH A 30 14.864 -13.034 16.507 1.00 25.35 O
HETATM 217 O HOH A 31 9.241 -5.336 21.888 1.00 25.70 O
HETATM 218 O HOH A 32 1.706 10.188 8.377 1.00 29.03 O
HETATM 219 O HOH A 33 15.829 -15.663 14.889 1.00 29.38 O
HETATM 220 O HOH A 34 15.990 -9.980 11.597 1.00 31.71 O
HETATM 221 O HOH A 35 18.518 0.628 17.213 1.00 31.87 O
HETATM 222 O HOH A 36 6.066 -3.688 6.113 1.00 32.75 O
HETATM 223 O HOH A 37 3.929 5.279 16.299 1.00 33.20 O
HETATM 224 O HOH A 38 18.306 -13.025 19.578 1.00 35.21 O
HETATM 225 O HOH A 39 -1.810 10.853 8.339 1.00 37.20 O
HETATM 226 O HOH A 40 4.708 -6.159 5.556 1.00 38.14 O
HETATM 227 O HOH A 41 19.709 -4.650 9.974 1.00 39.37 O
HETATM 228 O HOH A 42 7.858 5.392 4.418 1.00 39.38 O
HETATM 229 O HOH A 43 -2.572 8.168 16.502 1.00 39.71 O
HETATM 230 O HOH A 44 17.064 -4.704 19.587 1.00 41.36 O
HETATM 231 O HOH A 45 -4.391 12.742 12.664 1.00 43.03 O
HETATM 232 O HOH A 46 11.170 -10.390 23.605 1.00 44.34 O
HETATM 233 O HOH A 47 19.685 -3.282 12.906 1.00 46.37 O
HETATM 234 O HOH A 48 18.914 -1.294 8.782 1.00 46.92 O
HETATM 235 O HOH A 49 19.198 -7.403 10.262 1.00 47.90 O
HETATM 236 O HOH A 50 -4.293 15.908 12.956 1.00 48.25 O
HETATM 237 O HOH A 51 16.210 -6.982 20.889 1.00 48.89 O
HETATM 238 O HOH A 52 5.591 -2.002 3.959 1.00 53.31 O
HETATM 239 O HOH A 53 -2.397 8.752 10.169 1.00 53.55 O
HETATM 240 O HOH A 54 -1.586 4.941 12.006 1.00 54.84 O
HETATM 241 O HOH A 55 1.840 2.167 10.468 1.00 55.25 O
CONECT 103 196
CONECT 161 162 163
CONECT 162 161
CONECT 163 161 164
CONECT 164 163 165 168
CONECT 165 164 166
CONECT 166 165 167 170
CONECT 167 166 168 169
CONECT 168 164 167
CONECT 169 167
CONECT 170 166 171 172
CONECT 171 170
CONECT 172 170 173
CONECT 173 172 174 177
CONECT 174 173 175
CONECT 175 174 176 179
CONECT 176 175 177 178
CONECT 177 173 176
CONECT 178 176
CONECT 179 175 180 181
CONECT 180 179
CONECT 181 179 182
CONECT 182 181 183 186
CONECT 183 182 184
CONECT 184 183 185 188
CONECT 185 184 186 187
CONECT 186 182 185
CONECT 187 185
CONECT 188 184 189 190
CONECT 189 188
CONECT 190 188 191
CONECT 191 190 192
CONECT 192 191 193
CONECT 193 192 194 195
CONECT 194 193
CONECT 195 193
CONECT 196 103 200 201 203
CONECT 200 196
CONECT 201 196
CONECT 203 196
MASTER 280 0 2 0 0 0 6 6 240 1 40 1
END