HEADER DNA-RNA HYBRID 18-JUL-95 216D
TITLE CRYSTAL STRUCTURES OF THE B-FORM DNA-RNA CHIMER (5'-D(*IP*)-R(*CP*)-
TITLE 2 D(*IP*CP*IP*CP*IP*C)-3') COMPLEXED WITH DISTAMYCIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA/RNA (5'-D(*IP*)-R(*CP*)-D(*IP*CP*IP*CP*IP*C)-3');
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS B-DNA/RNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA-RNA
KEYWDS 2 HYBRID
EXPDTA X-RAY DIFFRACTION
AUTHOR X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
REVDAT 4 14-FEB-24 216D 1 REMARK LINK
REVDAT 3 24-FEB-09 216D 1 VERSN
REVDAT 2 01-APR-03 216D 1 JRNL
REVDAT 1 29-JAN-96 216D 0
JRNL AUTH X.CHEN,B.RAMAKRISHNAN,M.SUNDARALINGAM
JRNL TITL CRYSTAL STRUCTURES OF B-FORM DNA-RNA CHIMERS COMPLEXED WITH
JRNL TITL 2 DISTAMYCIN.
JRNL REF NAT.STRUCT.BIOL. V. 2 733 1995
JRNL REFN ISSN 1072-8368
JRNL PMID 7552741
JRNL DOI 10.1038/NSB0995-733
REMARK 2
REMARK 2 RESOLUTION. 1.73 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.0
REMARK 3 NUMBER OF REFLECTIONS : 2219
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING SET) : 0.152
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 158
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 43
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.011
REMARK 3 BOND ANGLES (DEGREES) : 3.700
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 216D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000177579.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 7.00
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : AREA DETECTOR
REMARK 200 DETECTOR MANUFACTURER : SIEMENS
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2556
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730
REMARK 200 RESOLUTION RANGE LOW (A) : NULL
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 45.38
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, VAPOR DIFFUSION, HANGING DROP
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y,X,Z+1/4
REMARK 290 4555 Y,-X,Z+3/4
REMARK 290 5555 -X,Y,-Z
REMARK 290 6555 X,-Y,-Z+1/2
REMARK 290 7555 Y,X,-Z+3/4
REMARK 290 8555 -Y,-X,-Z+1/4
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.73563
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.36782
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.10345
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.73563
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.10345
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 14.36782
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 28.73563
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 C A 2 C1' - O4' - C4' ANGL. DEV. = -4.6 DEGREES
REMARK 500 DC A 4 O4' - C1' - C2' ANGL. DEV. = -5.5 DEGREES
REMARK 500 DC A 4 N1 - C2 - O2 ANGL. DEV. = 4.9 DEGREES
REMARK 500 DC A 6 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 DI A 3 0.06 SIDE CHAIN
REMARK 500 DI A 5 0.07 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 10 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 DC A 6 OP2
REMARK 620 2 HOH A 14 O 92.0
REMARK 620 3 HOH A 19 O 87.8 89.6
REMARK 620 4 HOH A 23 O 96.3 171.5 89.0
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMY A 9
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 10
DBREF 216D A 1 8 PDB 216D 216D 1 8
SEQRES 1 A 8 DI C DI DC DI DC DI DC
HET DMY A 9 35
HET MG A 10 1
HETNAM DMY DISTAMYCIN A
HETNAM MG MAGNESIUM ION
HETSYN DMY DISTAMYCIN; STALLIMYCIN
FORMUL 2 DMY C22 H27 N9 O4
FORMUL 3 MG MG 2+
FORMUL 4 HOH *43(H2 O)
LINK OP2 DC A 6 MG MG A 10 1555 1555 2.00
LINK MG MG A 10 O HOH A 14 1555 1555 2.09
LINK MG MG A 10 O HOH A 19 1555 1555 2.16
LINK MG MG A 10 O HOH A 23 1555 1555 2.15
SITE 1 AC1 12 C A 2 DI A 3 DC A 4 DI A 5
SITE 2 AC1 12 DC A 6 DI A 7 DC A 8 HOH A 12
SITE 3 AC1 12 HOH A 21 HOH A 33 HOH A 35 HOH A 39
SITE 1 AC2 6 DC A 6 HOH A 14 HOH A 15 HOH A 16
SITE 2 AC2 6 HOH A 19 HOH A 23
CRYST1 27.920 27.920 57.700 90.00 90.00 90.00 P 41 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.035804 0.000000 0.000000 0.00000
SCALE2 0.000000 0.035804 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017400 0.00000
ATOM 1 O5' DI A 1 -0.977 14.566 18.155 1.00 10.41 O
ATOM 2 C5' DI A 1 -1.057 13.221 17.651 1.00 9.75 C
ATOM 3 C4' DI A 1 -0.684 13.185 16.168 1.00 9.31 C
ATOM 4 O4' DI A 1 0.712 13.544 16.035 1.00 9.02 O
ATOM 5 C3' DI A 1 -0.842 11.774 15.684 1.00 9.33 C
ATOM 6 O3' DI A 1 -1.186 11.936 14.305 1.00 9.55 O
ATOM 7 C2' DI A 1 0.583 11.220 15.842 1.00 8.91 C
ATOM 8 C1' DI A 1 1.443 12.411 15.492 1.00 8.75 C
ATOM 9 N9 DI A 1 2.780 12.288 16.115 1.00 8.55 N
ATOM 10 C8 DI A 1 3.062 12.301 17.467 1.00 8.55 C
ATOM 11 N7 DI A 1 4.343 12.352 17.744 1.00 8.48 N
ATOM 12 C5 DI A 1 4.966 12.399 16.497 1.00 8.33 C
ATOM 13 C6 DI A 1 6.343 12.347 16.179 1.00 8.23 C
ATOM 14 O6 DI A 1 7.307 12.324 16.942 1.00 8.21 O
ATOM 15 N1 DI A 1 6.554 12.271 14.818 1.00 8.50 N
ATOM 16 C2 DI A 1 5.558 12.218 13.870 1.00 8.19 C
ATOM 17 N3 DI A 1 4.258 12.293 14.154 1.00 8.20 N
ATOM 18 C4 DI A 1 4.026 12.351 15.490 1.00 8.36 C
ATOM 19 P C A 2 -1.749 10.679 13.474 1.00 9.89 P
ATOM 20 OP1 C A 2 -2.336 11.199 12.213 1.00 10.05 O
ATOM 21 OP2 C A 2 -2.534 9.833 14.384 1.00 10.35 O
ATOM 22 O5' C A 2 -0.438 9.830 13.090 1.00 9.90 O
ATOM 23 C5' C A 2 0.348 10.096 11.916 1.00 9.85 C
ATOM 24 C4' C A 2 1.570 9.200 11.832 1.00 9.86 C
ATOM 25 O4' C A 2 2.467 9.563 12.897 1.00 9.57 O
ATOM 26 C3' C A 2 1.125 7.737 12.145 1.00 10.11 C
ATOM 27 O3' C A 2 1.820 6.918 11.193 1.00 10.89 O
ATOM 28 C2' C A 2 1.725 7.510 13.535 1.00 9.67 C
ATOM 29 O2' C A 2 1.960 6.126 13.843 1.00 9.53 O
ATOM 30 C1' C A 2 2.991 8.320 13.383 1.00 9.39 C
ATOM 31 N1 C A 2 3.765 8.477 14.639 1.00 8.92 N
ATOM 32 C2 C A 2 5.146 8.655 14.516 1.00 8.73 C
ATOM 33 O2 C A 2 5.723 8.628 13.419 1.00 8.59 O
ATOM 34 N3 C A 2 5.868 8.890 15.654 1.00 8.46 N
ATOM 35 C4 C A 2 5.270 8.985 16.846 1.00 8.50 C
ATOM 36 N4 C A 2 6.029 9.223 17.917 1.00 8.60 N
ATOM 37 C5 C A 2 3.847 8.853 16.976 1.00 8.51 C
ATOM 38 C6 C A 2 3.138 8.620 15.854 1.00 8.71 C
ATOM 39 P DI A 3 1.040 6.453 9.867 1.00 11.40 P
ATOM 40 OP1 DI A 3 0.460 7.629 9.204 1.00 11.65 O
ATOM 41 OP2 DI A 3 0.198 5.296 10.230 1.00 11.28 O
ATOM 42 O5' DI A 3 2.218 5.910 8.980 1.00 11.11 O
ATOM 43 C5' DI A 3 3.061 6.711 8.174 1.00 10.98 C
ATOM 44 C4' DI A 3 4.264 5.900 7.701 1.00 10.85 C
ATOM 45 O4' DI A 3 5.239 5.832 8.744 1.00 10.75 O
ATOM 46 C3' DI A 3 3.880 4.445 7.376 1.00 11.00 C
ATOM 47 O3' DI A 3 4.792 4.099 6.337 1.00 11.67 O
ATOM 48 C2' DI A 3 4.211 3.684 8.682 1.00 10.68 C
ATOM 49 C1' DI A 3 5.374 4.489 9.265 1.00 10.38 C
ATOM 50 N9 DI A 3 5.280 4.594 10.736 1.00 9.99 N
ATOM 51 C8 DI A 3 4.174 4.901 11.463 1.00 10.09 C
ATOM 52 N7 DI A 3 4.396 5.130 12.730 1.00 9.88 N
ATOM 53 C5 DI A 3 5.761 5.013 12.851 1.00 9.65 C
ATOM 54 C6 DI A 3 6.571 5.233 13.988 1.00 9.61 C
ATOM 55 O6 DI A 3 6.187 5.517 15.123 1.00 9.29 O
ATOM 56 N1 DI A 3 7.933 5.096 13.682 1.00 9.38 N
ATOM 57 C2 DI A 3 8.428 4.746 12.446 1.00 9.35 C
ATOM 58 N3 DI A 3 7.639 4.502 11.384 1.00 9.53 N
ATOM 59 C4 DI A 3 6.325 4.690 11.638 1.00 9.79 C
ATOM 60 P DC A 4 4.845 2.683 5.571 1.00 12.36 P
ATOM 61 OP1 DC A 4 5.480 2.939 4.242 1.00 12.61 O
ATOM 62 OP2 DC A 4 3.556 1.999 5.701 1.00 12.29 O
ATOM 63 O5' DC A 4 5.898 1.833 6.440 1.00 11.79 O
ATOM 64 C5' DC A 4 7.299 2.063 6.399 1.00 11.07 C
ATOM 65 C4' DC A 4 7.990 1.230 7.452 1.00 10.65 C
ATOM 66 O4' DC A 4 7.462 1.671 8.725 1.00 10.47 O
ATOM 67 C3' DC A 4 7.574 -0.225 7.316 1.00 10.46 C
ATOM 68 O3' DC A 4 8.814 -0.911 7.308 1.00 10.89 O
ATOM 69 C2' DC A 4 6.906 -0.508 8.654 1.00 10.37 C
ATOM 70 C1' DC A 4 7.549 0.533 9.551 1.00 10.02 C
ATOM 71 N1 DC A 4 6.793 0.825 10.791 1.00 9.73 N
ATOM 72 C2 DC A 4 7.527 1.182 11.925 1.00 9.46 C
ATOM 73 O2 DC A 4 8.753 1.155 11.981 1.00 9.30 O
ATOM 74 N3 DC A 4 6.846 1.552 13.029 1.00 9.30 N
ATOM 75 C4 DC A 4 5.510 1.488 13.081 1.00 9.25 C
ATOM 76 N4 DC A 4 4.927 1.863 14.220 1.00 9.15 N
ATOM 77 C5 DC A 4 4.738 1.077 11.945 1.00 9.41 C
ATOM 78 C6 DC A 4 5.416 0.851 10.799 1.00 9.46 C
ATOM 79 P DI A 5 9.334 -1.670 5.965 1.00 10.77 P
ATOM 80 OP1 DI A 5 9.355 -0.681 4.855 1.00 11.06 O
ATOM 81 OP2 DI A 5 8.550 -2.901 5.801 1.00 10.87 O
ATOM 82 O5' DI A 5 10.839 -2.048 6.344 1.00 10.35 O
ATOM 83 C5' DI A 5 11.840 -1.047 6.597 1.00 9.65 C
ATOM 84 C4' DI A 5 12.692 -1.400 7.791 1.00 9.25 C
ATOM 85 O4' DI A 5 11.830 -1.328 8.927 1.00 9.03 O
ATOM 86 C3' DI A 5 13.181 -2.837 7.649 1.00 9.02 C
ATOM 87 O3' DI A 5 14.549 -2.787 8.028 1.00 9.05 O
ATOM 88 C2' DI A 5 12.335 -3.625 8.664 1.00 8.95 C
ATOM 89 C1' DI A 5 11.886 -2.551 9.672 1.00 8.78 C
ATOM 90 N9 DI A 5 10.511 -2.827 10.148 1.00 8.60 N
ATOM 91 C8 DI A 5 9.431 -3.277 9.423 1.00 8.44 C
ATOM 92 N7 DI A 5 8.291 -3.181 10.041 1.00 8.43 N
ATOM 93 C5 DI A 5 8.640 -2.663 11.282 1.00 8.44 C
ATOM 94 C6 DI A 5 7.814 -2.393 12.402 1.00 8.45 C
ATOM 95 O6 DI A 5 6.596 -2.502 12.466 1.00 8.40 O
ATOM 96 N1 DI A 5 8.533 -1.945 13.508 1.00 8.33 N
ATOM 97 C2 DI A 5 9.902 -1.778 13.529 1.00 8.35 C
ATOM 98 N3 DI A 5 10.691 -2.018 12.459 1.00 8.50 N
ATOM 99 C4 DI A 5 9.985 -2.423 11.357 1.00 8.53 C
ATOM 100 P DC A 6 15.544 -4.052 8.008 1.00 8.97 P
ATOM 101 OP1 DC A 6 16.919 -3.558 7.828 1.00 9.25 O
ATOM 102 OP2 DC A 6 15.005 -5.093 7.103 1.00 9.02 O
ATOM 103 O5' DC A 6 15.381 -4.569 9.525 1.00 9.08 O
ATOM 104 C5' DC A 6 15.789 -3.783 10.657 1.00 8.94 C
ATOM 105 C4' DC A 6 15.198 -4.351 11.945 1.00 9.11 C
ATOM 106 O4' DC A 6 13.788 -4.355 11.787 1.00 8.98 O
ATOM 107 C3' DC A 6 15.577 -5.808 12.063 1.00 9.39 C
ATOM 108 O3' DC A 6 16.585 -5.751 13.059 1.00 9.99 O
ATOM 109 C2' DC A 6 14.315 -6.458 12.605 1.00 9.11 C
ATOM 110 C1' DC A 6 13.332 -5.313 12.744 1.00 8.87 C
ATOM 111 N1 DC A 6 11.940 -5.720 12.448 1.00 8.68 N
ATOM 112 C2 DC A 6 10.964 -5.431 13.401 1.00 8.57 C
ATOM 113 O2 DC A 6 11.266 -5.021 14.517 1.00 8.22 O
ATOM 114 N3 DC A 6 9.647 -5.603 13.080 1.00 8.43 N
ATOM 115 C4 DC A 6 9.288 -6.037 11.863 1.00 8.50 C
ATOM 116 N4 DC A 6 8.001 -6.274 11.611 1.00 8.36 N
ATOM 117 C5 DC A 6 10.279 -6.321 10.862 1.00 8.59 C
ATOM 118 C6 DC A 6 11.579 -6.167 11.207 1.00 8.77 C
ATOM 119 P DI A 7 17.379 -7.029 13.634 1.00 10.65 P
ATOM 120 OP1 DI A 7 18.620 -6.484 14.212 1.00 11.01 O
ATOM 121 OP2 DI A 7 17.457 -8.093 12.613 1.00 10.96 O
ATOM 122 O5' DI A 7 16.457 -7.610 14.824 1.00 10.14 O
ATOM 123 C5' DI A 7 16.139 -6.855 15.988 1.00 9.61 C
ATOM 124 C4' DI A 7 14.967 -7.471 16.715 1.00 9.25 C
ATOM 125 O4' DI A 7 13.839 -7.485 15.839 1.00 8.96 O
ATOM 126 C3' DI A 7 15.288 -8.918 17.061 1.00 9.35 C
ATOM 127 O3' DI A 7 14.965 -8.890 18.445 1.00 9.89 O
ATOM 128 C2' DI A 7 14.254 -9.715 16.295 1.00 8.97 C
ATOM 129 C1' DI A 7 13.126 -8.713 16.057 1.00 8.59 C
ATOM 130 N9 DI A 7 12.400 -9.006 14.797 1.00 8.41 N
ATOM 131 C8 DI A 7 12.920 -9.357 13.564 1.00 8.19 C
ATOM 132 N7 DI A 7 12.024 -9.440 12.613 1.00 8.03 N
ATOM 133 C5 DI A 7 10.813 -9.157 13.268 1.00 7.89 C
ATOM 134 C6 DI A 7 9.455 -9.202 12.779 1.00 7.82 C
ATOM 135 O6 DI A 7 9.040 -9.459 11.651 1.00 7.54 O
ATOM 136 N1 DI A 7 8.547 -8.852 13.765 1.00 7.46 N
ATOM 137 C2 DI A 7 8.871 -8.561 15.067 1.00 7.66 C
ATOM 138 N3 DI A 7 10.119 -8.548 15.532 1.00 7.81 N
ATOM 139 C4 DI A 7 11.045 -8.839 14.584 1.00 8.08 C
ATOM 140 P DC A 8 15.195 -10.163 19.402 1.00 10.31 P
ATOM 141 OP1 DC A 8 15.585 -9.615 20.732 1.00 10.52 O
ATOM 142 OP2 DC A 8 16.027 -11.186 18.731 1.00 10.27 O
ATOM 143 O5' DC A 8 13.734 -10.803 19.507 1.00 9.98 O
ATOM 144 C5' DC A 8 12.676 -10.173 20.228 1.00 9.30 C
ATOM 145 C4' DC A 8 11.369 -10.931 20.106 1.00 8.88 C
ATOM 146 O4' DC A 8 11.037 -10.872 18.722 1.00 8.47 O
ATOM 147 C3' DC A 8 11.603 -12.424 20.445 1.00 8.61 C
ATOM 148 O3' DC A 8 10.725 -12.827 21.491 1.00 8.69 O
ATOM 149 C2' DC A 8 11.296 -13.118 19.126 1.00 8.51 C
ATOM 150 C1' DC A 8 10.384 -12.091 18.438 1.00 8.18 C
ATOM 151 N1 DC A 8 10.378 -12.201 16.971 1.00 7.73 N
ATOM 152 C2 DC A 8 9.139 -12.204 16.336 1.00 7.66 C
ATOM 153 O2 DC A 8 8.083 -12.109 16.961 1.00 7.77 O
ATOM 154 N3 DC A 8 9.101 -12.285 14.981 1.00 7.40 N
ATOM 155 C4 DC A 8 10.231 -12.349 14.270 1.00 7.29 C
ATOM 156 N4 DC A 8 10.118 -12.412 12.939 1.00 7.21 N
ATOM 157 C5 DC A 8 11.528 -12.355 14.906 1.00 7.35 C
ATOM 158 C6 DC A 8 11.553 -12.266 16.255 1.00 7.51 C
TER 159 DC A 8
HETATM 160 C1 DMY A 9 10.117 -3.157 19.690 1.00 8.55 C
HETATM 161 O1 DMY A 9 10.706 -3.510 20.709 1.00 8.70 O
HETATM 162 N1 DMY A 9 10.586 -2.340 18.731 1.00 8.28 N
HETATM 163 C2 DMY A 9 11.781 -1.724 18.623 1.00 8.27 C
HETATM 164 C3 DMY A 9 12.162 -0.892 17.558 1.00 8.20 C
HETATM 165 C4 DMY A 9 13.485 -0.495 17.783 1.00 8.27 C
HETATM 166 N2 DMY A 9 13.889 -1.068 18.939 1.00 8.36 N
HETATM 167 C5 DMY A 9 12.907 -1.795 19.468 1.00 8.29 C
HETATM 168 C6 DMY A 9 15.259 -0.924 19.617 1.00 8.32 C
HETATM 169 C7 DMY A 9 14.275 0.301 16.904 1.00 8.29 C
HETATM 170 O2 DMY A 9 15.508 0.289 16.967 1.00 8.53 O
HETATM 171 N3 DMY A 9 13.594 1.081 16.033 1.00 8.24 N
HETATM 172 C8 DMY A 9 14.145 1.762 15.001 1.00 8.15 C
HETATM 173 C9 DMY A 9 13.479 2.588 14.079 1.00 8.17 C
HETATM 174 C10 DMY A 9 14.432 3.101 13.187 1.00 8.21 C
HETATM 175 N4 DMY A 9 15.624 2.583 13.535 1.00 8.23 N
HETATM 176 C11 DMY A 9 15.493 1.805 14.592 1.00 8.27 C
HETATM 177 C12 DMY A 9 17.002 2.781 12.895 1.00 8.23 C
HETATM 178 C13 DMY A 9 14.167 3.920 12.044 1.00 8.24 C
HETATM 179 O3 DMY A 9 14.981 4.007 11.125 1.00 8.43 O
HETATM 180 N5 DMY A 9 13.033 4.646 12.067 1.00 8.13 N
HETATM 181 C14 DMY A 9 12.508 5.377 11.054 1.00 8.17 C
HETATM 182 C15 DMY A 9 11.344 6.148 11.113 1.00 8.32 C
HETATM 183 C16 DMY A 9 11.148 6.729 9.842 1.00 8.50 C
HETATM 184 N6 DMY A 9 12.166 6.323 9.048 1.00 8.48 N
HETATM 185 C17 DMY A 9 12.970 5.522 9.723 1.00 8.41 C
HETATM 186 C18 DMY A 9 12.366 6.648 7.551 1.00 8.54 C
HETATM 187 C19 DMY A 9 9.998 7.488 9.440 1.00 8.67 C
HETATM 188 O4 DMY A 9 9.591 7.581 8.264 1.00 8.91 O
HETATM 189 N7 DMY A 9 9.385 8.118 10.455 1.00 8.58 N
HETATM 190 C20 DMY A 9 8.230 8.977 10.241 1.00 8.46 C
HETATM 191 C21 DMY A 9 6.926 8.211 10.108 1.00 8.54 C
HETATM 192 C22 DMY A 9 5.778 9.171 9.848 1.00 8.65 C
HETATM 193 N8 DMY A 9 5.540 9.595 8.610 1.00 8.73 N
HETATM 194 N9 DMY A 9 5.040 9.605 10.868 1.00 8.55 N
HETATM 195 MG MG A 10 14.017 -6.572 6.181 1.00 11.51 MG
HETATM 196 O HOH A 11 10.090 1.919 4.175 1.00 17.22 O
HETATM 197 O HOH A 12 3.737 12.184 11.266 1.00 9.44 O
HETATM 198 O HOH A 13 1.602 15.127 19.267 1.00 12.93 O
HETATM 199 O HOH A 14 14.999 -6.203 4.379 1.00 7.85 O
HETATM 200 O HOH A 15 8.245 13.106 19.463 1.00 9.36 O
HETATM 201 O HOH A 16 5.512 12.297 20.245 1.00 10.13 O
HETATM 202 O HOH A 17 5.450 9.535 20.931 1.00 12.74 O
HETATM 203 O HOH A 18 7.423 -0.518 2.706 1.00 18.82 O
HETATM 204 O HOH A 19 15.621 -7.896 6.768 1.00 10.58 O
HETATM 205 O HOH A 20 9.894 -10.763 9.259 1.00 20.79 O
HETATM 206 O HOH A 21 12.041 -2.840 23.055 1.00 19.56 O
HETATM 207 O HOH A 22 12.845 -12.266 11.728 1.00 16.35 O
HETATM 208 O HOH A 23 12.904 -7.221 7.903 1.00 12.49 O
HETATM 209 O HOH A 24 13.456 -8.937 9.925 1.00 19.01 O
HETATM 210 O HOH A 25 1.026 10.545 8.230 1.00 32.45 O
HETATM 211 O HOH A 26 15.815 -10.004 11.340 1.00 42.78 O
HETATM 212 O HOH A 27 3.726 5.096 16.416 1.00 27.25 O
HETATM 213 O HOH A 28 18.890 -1.483 8.990 1.00 49.08 O
HETATM 214 O HOH A 29 14.862 -13.160 16.815 1.00 25.99 O
HETATM 215 O HOH A 30 19.491 -3.736 12.986 1.00 38.62 O
HETATM 216 O HOH A 31 -2.792 14.760 20.439 1.00 36.05 O
HETATM 217 O HOH A 32 18.163 -7.762 8.017 1.00 41.85 O
HETATM 218 O HOH A 33 16.787 4.589 9.139 1.00 30.61 O
HETATM 219 O HOH A 34 7.818 -7.054 8.433 1.00 11.08 O
HETATM 220 O HOH A 35 8.683 5.083 6.985 1.00 30.63 O
HETATM 221 O HOH A 36 11.403 -15.297 22.841 1.00 25.56 O
HETATM 222 O HOH A 37 1.969 2.109 14.188 1.00 22.30 O
HETATM 223 O HOH A 38 6.137 -4.594 8.901 1.00 28.63 O
HETATM 224 O HOH A 39 18.254 0.907 17.228 1.00 39.02 O
HETATM 225 O HOH A 40 -4.749 12.592 12.091 1.00 45.31 O
HETATM 226 O HOH A 41 4.487 -2.909 10.646 1.00 24.46 O
HETATM 227 O HOH A 42 8.425 10.521 22.055 1.00 22.39 O
HETATM 228 O HOH A 43 15.242 -12.163 13.385 1.00 45.46 O
HETATM 229 O HOH A 44 -2.554 7.976 16.743 1.00 43.08 O
HETATM 230 O HOH A 45 12.494 -5.076 24.861 1.00 42.67 O
HETATM 231 O HOH A 46 7.239 5.773 4.615 1.00 43.22 O
HETATM 232 O HOH A 47 1.288 2.470 10.965 1.00 56.90 O
HETATM 233 O HOH A 48 -0.481 4.517 14.127 1.00 53.32 O
HETATM 234 O HOH A 49 18.905 -10.576 8.912 1.00 43.45 O
HETATM 235 O HOH A 50 16.258 -6.860 21.272 1.00 42.96 O
HETATM 236 O HOH A 51 19.316 -4.567 9.148 1.00 45.99 O
HETATM 237 O HOH A 52 5.849 -3.464 5.091 1.00 41.48 O
HETATM 238 O HOH A 53 17.772 -13.234 19.914 1.00 55.91 O
CONECT 102 195
CONECT 160 161 162
CONECT 161 160
CONECT 162 160 163
CONECT 163 162 164 167
CONECT 164 163 165
CONECT 165 164 166 169
CONECT 166 165 167 168
CONECT 167 163 166
CONECT 168 166
CONECT 169 165 170 171
CONECT 170 169
CONECT 171 169 172
CONECT 172 171 173 176
CONECT 173 172 174
CONECT 174 173 175 178
CONECT 175 174 176 177
CONECT 176 172 175
CONECT 177 175
CONECT 178 174 179 180
CONECT 179 178
CONECT 180 178 181
CONECT 181 180 182 185
CONECT 182 181 183
CONECT 183 182 184 187
CONECT 184 183 185 186
CONECT 185 181 184
CONECT 186 184
CONECT 187 183 188 189
CONECT 188 187
CONECT 189 187 190
CONECT 190 189 191
CONECT 191 190 192
CONECT 192 191 193 194
CONECT 193 192
CONECT 194 192
CONECT 195 102 199 204 208
CONECT 199 195
CONECT 204 195
CONECT 208 195
MASTER 278 0 2 0 0 0 5 6 237 1 40 1
END