data_200D
#
_entry.id 200D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.387
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 200D pdb_0000200d 10.2210/pdb200d/pdb
RCSB UDF027 ? ?
WWPDB D_1000177549 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1995-07-31
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-14
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 200D
_pdbx_database_status.recvd_initial_deposition_date 1995-02-16
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Kang, C.' 1
'Berger, I.' 2
'Lockshin, C.' 3
'Ratliff, R.' 4
'Moyzis, R.' 5
'Rich, A.' 6
#
_citation.id primary
_citation.title
'Stable loop in the crystal structure of the intercalated four-stranded cytosine-rich metazoan telomere.'
_citation.journal_abbrev Proc.Natl.Acad.Sci.USA
_citation.journal_volume 92
_citation.page_first 3874
_citation.page_last 3878
_citation.year 1995
_citation.journal_id_ASTM PNASA6
_citation.country US
_citation.journal_id_ISSN 0027-8424
_citation.journal_id_CSD 0040
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 7731999
_citation.pdbx_database_id_DOI 10.1073/pnas.92.9.3874
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Kang, C.' 1 ?
primary 'Berger, I.' 2 ?
primary 'Lockshin, C.' 3 ?
primary 'Ratliff, R.' 4 ?
primary 'Moyzis, R.' 5 ?
primary 'Rich, A.' 6 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*TP*AP*AP*CP*CP*C)-3')
;
1753.194 2 ? ? ? ?
2 water nat water 18.015 26 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DA)(DA)(DC)(DC)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can TAACCC
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DA n
1 3 DA n
1 4 DC n
1 5 DC n
1 6 DC n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1 1 DT T A . n
A 1 2 DA 2 2 2 DA A A . n
A 1 3 DA 3 3 3 DA A A . n
A 1 4 DC 4 4 4 DC C A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DC 6 6 6 DC C A . n
B 1 1 DT 1 7 7 DT T B . n
B 1 2 DA 2 8 8 DA A B . n
B 1 3 DA 3 9 9 DA A B . n
B 1 4 DC 4 10 10 DC C B . n
B 1 5 DC 5 11 11 DC C B . n
B 1 6 DC 6 12 12 DC C B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HOH 1 13 13 HOH HOH A .
C 2 HOH 2 14 14 HOH HOH A .
C 2 HOH 3 15 15 HOH HOH A .
C 2 HOH 4 16 16 HOH HOH A .
C 2 HOH 5 20 20 HOH HOH A .
C 2 HOH 6 21 21 HOH HOH A .
C 2 HOH 7 22 22 HOH HOH A .
C 2 HOH 8 24 24 HOH HOH A .
C 2 HOH 9 30 30 HOH HOH A .
C 2 HOH 10 31 31 HOH HOH A .
C 2 HOH 11 32 32 HOH HOH A .
C 2 HOH 12 33 33 HOH HOH A .
C 2 HOH 13 34 34 HOH HOH A .
D 2 HOH 1 17 17 HOH HOH B .
D 2 HOH 2 18 18 HOH HOH B .
D 2 HOH 3 19 19 HOH HOH B .
D 2 HOH 4 23 23 HOH HOH B .
D 2 HOH 5 25 25 HOH HOH B .
D 2 HOH 6 26 26 HOH HOH B .
D 2 HOH 7 27 27 HOH HOH B .
D 2 HOH 8 28 28 HOH HOH B .
D 2 HOH 9 29 29 HOH HOH B .
D 2 HOH 10 35 35 HOH HOH B .
D 2 HOH 11 36 36 HOH HOH B .
D 2 HOH 12 37 37 HOH HOH B .
D 2 HOH 13 38 38 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
X-PLOR refinement . ? 1
MSC 'data reduction' . ? 2
#
_cell.entry_id 200D
_cell.length_a 59.940
_cell.length_b 81.330
_cell.length_c 26.860
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 32
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 200D
_symmetry.space_group_name_H-M 'F 2 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 22
#
_exptl.entry_id 200D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.33
_exptl_crystal.density_percent_sol 47.30
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION'
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.00
_exptl_crystal_grow.pdbx_details 'pH 6.00, VAPOR DIFFUSION'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 MPD ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 SPERMINE ? ? ?
1 5 1 KCL ? ? ?
1 6 1 'K CACODYLATE' ? ? ?
1 7 2 WATER ? ? ?
1 8 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 277.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date 1994-07-20
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 200D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low ?
_reflns.d_resolution_high ?
_reflns.number_obs ?
_reflns.number_all ?
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs 0.0450000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 200D
_refine.ls_number_reflns_obs 2122
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 12.000
_refine.ls_d_res_high 1.850
_refine.ls_percent_reflns_obs 77.000
_refine.ls_R_factor_obs 0.1900000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.1900000
_refine.ls_R_factor_R_free 0.2230000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 258
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 26
_refine_hist.number_atoms_total 284
_refine_hist.d_res_high 1.850
_refine_hist.d_res_low 12.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 4.00 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 200D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 200D
_struct.title
'STABLE LOOP IN THE CRYSTAL STRUCTURE OF THE INTERCALATED FOUR-STRANDED CYTOSINE-RICH METAZOAN TELOMERE'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 200D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'U-DNA, QUADRUPLE HELIX, TETRAPLEX, BASE INTERCALATED, LOOP, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 200D
_struct_ref.pdbx_db_accession 200D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 200D A 1 ? 6 ? 200D 1 ? 6 ? 1 6
2 1 200D B 1 ? 6 ? 200D 7 ? 12 ? 7 12
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details tetrameric
_pdbx_struct_assembly.oligomeric_count 4
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 59.9400000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 26.8600000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 3 N7 ? ? A DT 1 A DA 3 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ?
hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 1 A DA 3 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ?
hydrog3 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 2 B DT 7 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ?
hydrog4 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 1 O2 ? ? A DA 2 B DT 7 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ?
hydrog5 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DC 4 O2 ? ? A DC 4 B DC 10 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ?
hydrog6 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DC 4 N4 ? ? A DC 4 B DC 10 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ?
hydrog7 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DC 5 N4 ? ? A DC 5 B DC 11 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ?
hydrog8 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DC 5 N3 ? ? A DC 5 B DC 11 1_555 ? ? ? ? ? ? TYPE_14_PAIR ? ? ?
hydrog9 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DC 6 O2 ? ? A DC 6 B DC 12 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ?
hydrog10 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DC 6 N4 ? ? A DC 6 B DC 12 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 N1 A DA 2 ? ? H3 B DT 7 ? ? 1.43
2 1 OP2 B DA 9 ? ? H42 B DC 10 ? ? 1.54
3 1 H42 A DC 6 ? ? O2 B DC 12 ? ? 1.55
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C5 A DT 1 ? ? C7 A DT 1 ? ? 1.534 1.496 0.038 0.006 N
2 1 "O3'" A DT 1 ? ? P A DA 2 ? ? 1.523 1.607 -0.084 0.012 Y
3 1 "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 1.427 1.521 -0.094 0.010 N
4 1 N9 A DA 3 ? ? C4 A DA 3 ? ? 1.332 1.374 -0.042 0.006 N
5 1 N3 A DC 4 ? ? C4 A DC 4 ? ? 1.288 1.335 -0.047 0.007 N
6 1 "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 1.461 1.516 -0.055 0.008 N
7 1 "C5'" A DC 6 ? ? "C4'" A DC 6 ? ? 1.602 1.512 0.090 0.007 N
8 1 "C3'" A DC 6 ? ? "C2'" A DC 6 ? ? 1.466 1.516 -0.050 0.008 N
9 1 N3 A DC 6 ? ? C4 A DC 6 ? ? 1.283 1.335 -0.052 0.007 N
10 1 "C5'" B DT 7 ? ? "C4'" B DT 7 ? ? 1.594 1.512 0.082 0.007 N
11 1 C2 B DT 7 ? ? N3 B DT 7 ? ? 1.324 1.373 -0.049 0.008 N
12 1 P B DA 8 ? ? "O5'" B DA 8 ? ? 1.656 1.593 0.063 0.010 N
13 1 "C4'" B DC 10 ? ? "C3'" B DC 10 ? ? 1.438 1.521 -0.083 0.010 N
14 1 N1 B DC 10 ? ? C6 B DC 10 ? ? 1.304 1.367 -0.063 0.006 N
15 1 C4 B DC 10 ? ? C5 B DC 10 ? ? 1.375 1.425 -0.050 0.008 N
16 1 N1 B DC 11 ? ? C2 B DC 11 ? ? 1.303 1.397 -0.094 0.010 N
17 1 N1 B DC 11 ? ? C6 B DC 11 ? ? 1.327 1.367 -0.040 0.006 N
18 1 C2 B DC 11 ? ? N3 B DC 11 ? ? 1.297 1.353 -0.056 0.008 N
19 1 "O4'" B DC 12 ? ? "C4'" B DC 12 ? ? 1.377 1.446 -0.069 0.010 N
20 1 N1 B DC 12 ? ? C2 B DC 12 ? ? 1.335 1.397 -0.062 0.010 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.22 108.30 2.92 0.30 N
2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.47 122.90 -4.43 0.60 N
3 1 "C3'" A DT 1 ? ? "O3'" A DT 1 ? ? P A DA 2 ? ? 134.55 119.70 14.85 1.20 Y
4 1 "O3'" A DT 1 ? ? P A DA 2 ? ? "O5'" A DA 2 ? ? 92.28 104.00 -11.72 1.90 Y
5 1 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 110.33 106.00 4.33 0.60 N
6 1 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "C2'" A DA 2 ? ? 93.10 102.20 -9.10 0.70 N
7 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 98.14 105.90 -7.76 0.80 N
8 1 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 122.32 118.60 3.72 0.60 N
9 1 "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? P A DA 3 ? ? 127.60 119.70 7.90 1.20 Y
10 1 "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 96.79 104.50 -7.71 0.40 N
11 1 "C1'" A DA 3 ? ? "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? 116.45 110.30 6.15 0.70 N
12 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 99.07 105.90 -6.83 0.80 N
13 1 N1 A DA 3 ? ? C2 A DA 3 ? ? N3 A DA 3 ? ? 132.41 129.30 3.11 0.50 N
14 1 C2 A DA 3 ? ? N3 A DA 3 ? ? C4 A DA 3 ? ? 106.73 110.60 -3.87 0.50 N
15 1 "C4'" A DC 4 ? ? "C3'" A DC 4 ? ? "C2'" A DC 4 ? ? 97.87 102.20 -4.33 0.70 N
16 1 "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? 94.47 102.20 -7.73 0.70 N
17 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 103.25 108.00 -4.75 0.70 N
18 1 C2 A DC 5 ? ? N3 A DC 5 ? ? C4 A DC 5 ? ? 123.45 119.90 3.55 0.50 N
19 1 P A DC 6 ? ? "O5'" A DC 6 ? ? "C5'" A DC 6 ? ? 134.14 120.90 13.24 1.60 N
20 1 "O4'" A DC 6 ? ? "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? 100.12 104.50 -4.38 0.40 N
21 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 112.24 108.30 3.94 0.30 N
22 1 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.79 118.90 3.89 0.60 N
23 1 N3 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 113.04 118.00 -4.96 0.70 N
24 1 C5 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 124.42 120.20 4.22 0.70 N
25 1 "C5'" B DT 7 ? ? "C4'" B DT 7 ? ? "O4'" B DT 7 ? ? 119.04 109.80 9.24 1.10 N
26 1 N1 B DT 7 ? ? C2 B DT 7 ? ? O2 B DT 7 ? ? 128.37 123.10 5.27 0.80 N
27 1 N3 B DT 7 ? ? C2 B DT 7 ? ? O2 B DT 7 ? ? 117.95 122.30 -4.35 0.60 N
28 1 "C3'" B DT 7 ? ? "O3'" B DT 7 ? ? P B DA 8 ? ? 108.76 119.70 -10.94 1.20 Y
29 1 "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? "C2'" B DA 8 ? ? 100.78 105.90 -5.12 0.80 N
30 1 C2 B DA 8 ? ? N3 B DA 8 ? ? C4 B DA 8 ? ? 107.31 110.60 -3.29 0.50 N
31 1 C5 B DA 8 ? ? C6 B DA 8 ? ? N1 B DA 8 ? ? 113.70 117.70 -4.00 0.50 N
32 1 "O4'" B DA 9 ? ? "C1'" B DA 9 ? ? "C2'" B DA 9 ? ? 98.60 105.90 -7.30 0.80 N
33 1 "C1'" B DC 10 ? ? "O4'" B DC 10 ? ? "C4'" B DC 10 ? ? 116.83 110.30 6.53 0.70 N
34 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? "C2'" B DC 10 ? ? 95.64 105.90 -10.26 0.80 N
35 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.86 108.30 3.56 0.30 N
36 1 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 116.78 121.90 -5.12 0.70 N
37 1 "C3'" B DC 10 ? ? "O3'" B DC 10 ? ? P B DC 11 ? ? 128.94 119.70 9.24 1.20 Y
38 1 "C3'" B DC 11 ? ? "O3'" B DC 11 ? ? P B DC 12 ? ? 127.97 119.70 8.27 1.20 Y
39 1 "O4'" B DC 12 ? ? "C1'" B DC 12 ? ? "C2'" B DC 12 ? ? 100.83 105.90 -5.07 0.80 N
40 1 C2 B DC 12 ? ? N3 B DC 12 ? ? C4 B DC 12 ? ? 124.47 119.90 4.57 0.50 N
41 1 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 123.48 118.90 4.58 0.60 N
#
_pdbx_validate_planes.id 1
_pdbx_validate_planes.PDB_model_num 1
_pdbx_validate_planes.auth_comp_id DA
_pdbx_validate_planes.auth_asym_id A
_pdbx_validate_planes.auth_seq_id 3
_pdbx_validate_planes.PDB_ins_code ?
_pdbx_validate_planes.label_alt_id ?
_pdbx_validate_planes.rmsd 0.060
_pdbx_validate_planes.type 'SIDE CHAIN'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DT OP3 O N N 71
DT P P N N 72
DT OP1 O N N 73
DT OP2 O N N 74
DT "O5'" O N N 75
DT "C5'" C N N 76
DT "C4'" C N R 77
DT "O4'" O N N 78
DT "C3'" C N S 79
DT "O3'" O N N 80
DT "C2'" C N N 81
DT "C1'" C N R 82
DT N1 N N N 83
DT C2 C N N 84
DT O2 O N N 85
DT N3 N N N 86
DT C4 C N N 87
DT O4 O N N 88
DT C5 C N N 89
DT C7 C N N 90
DT C6 C N N 91
DT HOP3 H N N 92
DT HOP2 H N N 93
DT "H5'" H N N 94
DT "H5''" H N N 95
DT "H4'" H N N 96
DT "H3'" H N N 97
DT "HO3'" H N N 98
DT "H2'" H N N 99
DT "H2''" H N N 100
DT "H1'" H N N 101
DT H3 H N N 102
DT H71 H N N 103
DT H72 H N N 104
DT H73 H N N 105
DT H6 H N N 106
HOH O O N N 107
HOH H1 H N N 108
HOH H2 H N N 109
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DT OP3 P sing N N 74
DT OP3 HOP3 sing N N 75
DT P OP1 doub N N 76
DT P OP2 sing N N 77
DT P "O5'" sing N N 78
DT OP2 HOP2 sing N N 79
DT "O5'" "C5'" sing N N 80
DT "C5'" "C4'" sing N N 81
DT "C5'" "H5'" sing N N 82
DT "C5'" "H5''" sing N N 83
DT "C4'" "O4'" sing N N 84
DT "C4'" "C3'" sing N N 85
DT "C4'" "H4'" sing N N 86
DT "O4'" "C1'" sing N N 87
DT "C3'" "O3'" sing N N 88
DT "C3'" "C2'" sing N N 89
DT "C3'" "H3'" sing N N 90
DT "O3'" "HO3'" sing N N 91
DT "C2'" "C1'" sing N N 92
DT "C2'" "H2'" sing N N 93
DT "C2'" "H2''" sing N N 94
DT "C1'" N1 sing N N 95
DT "C1'" "H1'" sing N N 96
DT N1 C2 sing N N 97
DT N1 C6 sing N N 98
DT C2 O2 doub N N 99
DT C2 N3 sing N N 100
DT N3 C4 sing N N 101
DT N3 H3 sing N N 102
DT C4 O4 doub N N 103
DT C4 C5 sing N N 104
DT C5 C7 sing N N 105
DT C5 C6 doub N N 106
DT C7 H71 sing N N 107
DT C7 H72 sing N N 108
DT C7 H73 sing N N 109
DT C6 H6 sing N N 110
HOH O H1 sing N N 111
HOH O H2 sing N N 112
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
200D 'double helix'
200D 'parallel strands'
200D 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DA 2 1_555 B DT 1 1_555 0.647 1.405 -0.075 -6.037 5.429 179.470 1 A_DA2:DT7_B A 2 ? B 7 ? 21 2
1 A DA 3 1_555 A DT 1 1_555 0.729 -3.378 0.063 -3.994 -10.325 75.312 2 A_DA3:DT1_A A 3 ? A 1 ? 23 3
1 B DC 4 1_555 A DC 4 1_555 -2.120 -1.357 0.246 6.251 -10.196 -177.674 3 B_DC10:DC4_A B 10 ? A 4 ? 15 2
1 B DC 5 1_555 A DC 5 1_555 -2.098 -1.041 0.013 7.603 -6.173 -178.785 4 B_DC11:DC5_A B 11 ? A 5 ? 14 2
1 B DC 6 1_555 A DC 6 1_555 -2.096 -1.232 0.286 -0.592 4.252 -179.470 5 B_DC12:DC6_A B 12 ? A 6 ? 15 2
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DA 2 1_555 B DT 1 1_555 A DA 3 1_555 A DT 1 1_555 1.828 -1.547 3.651 -3.211 -2.169 73.231 -1.218 -1.645 3.617 -1.817 2.690
73.319 1 AA_DA2DA3:DT1DT7_AB A 2 ? B 7 ? A 3 ? A 1 ?
1 A DA 3 1_555 A DT 1 1_555 B DC 4 1_555 A DC 4 1_555 1.025 2.083 2.934 -0.143 2.764 26.223 3.880 -2.283 3.127 6.070 0.313
26.366 2 AB_DA3DC10:DC4DT1_AA A 3 ? A 1 ? B 10 ? A 4 ?
1 B DC 4 1_555 A DC 4 1_555 B DC 5 1_555 A DC 5 1_555 0.238 -0.332 6.550 -2.006 -2.965 17.552 2.398 -3.108 6.448 -9.586 6.487
17.910 3 BB_DC10DC11:DC5DC4_AA B 10 ? A 4 ? B 11 ? A 5 ?
1 B DC 5 1_555 A DC 5 1_555 B DC 6 1_555 A DC 6 1_555 -0.150 0.270 6.758 -1.782 -1.225 19.616 2.001 -1.324 6.715 -3.583 5.209
19.733 4 BB_DC11DC12:DC6DC5_AA B 11 ? A 5 ? B 12 ? A 6 ?
#
_atom_sites.entry_id 200D
_atom_sites.fract_transf_matrix[1][1] 0.016683
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.012296
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.037230
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DT A 1 1 ? 24.565 31.319 24.443 1.00 30.44 ? 1 DT A "O5'" 1
ATOM 2 C "C5'" . DT A 1 1 ? 23.942 30.467 25.330 1.00 20.89 ? 1 DT A "C5'" 1
ATOM 3 C "C4'" . DT A 1 1 ? 23.216 29.306 24.650 1.00 27.77 ? 1 DT A "C4'" 1
ATOM 4 O "O4'" . DT A 1 1 ? 22.175 29.736 23.812 1.00 23.30 ? 1 DT A "O4'" 1
ATOM 5 C "C3'" . DT A 1 1 ? 24.157 28.454 23.852 1.00 35.38 ? 1 DT A "C3'" 1
ATOM 6 O "O3'" . DT A 1 1 ? 23.905 27.189 24.366 1.00 33.40 ? 1 DT A "O3'" 1
ATOM 7 C "C2'" . DT A 1 1 ? 23.531 28.590 22.502 1.00 34.88 ? 1 DT A "C2'" 1
ATOM 8 C "C1'" . DT A 1 1 ? 22.104 28.825 22.807 1.00 18.33 ? 1 DT A "C1'" 1
ATOM 9 N N1 . DT A 1 1 ? 21.415 29.371 21.650 1.00 27.22 ? 1 DT A N1 1
ATOM 10 C C2 . DT A 1 1 ? 21.061 28.462 20.735 1.00 17.62 ? 1 DT A C2 1
ATOM 11 O O2 . DT A 1 1 ? 21.294 27.274 20.916 1.00 23.45 ? 1 DT A O2 1
ATOM 12 N N3 . DT A 1 1 ? 20.409 28.945 19.635 1.00 20.47 ? 1 DT A N3 1
ATOM 13 C C4 . DT A 1 1 ? 20.071 30.242 19.367 1.00 19.02 ? 1 DT A C4 1
ATOM 14 O O4 . DT A 1 1 ? 19.434 30.520 18.346 1.00 27.67 ? 1 DT A O4 1
ATOM 15 C C5 . DT A 1 1 ? 20.491 31.148 20.397 1.00 28.05 ? 1 DT A C5 1
ATOM 16 C C7 . DT A 1 1 ? 20.220 32.654 20.284 1.00 24.86 ? 1 DT A C7 1
ATOM 17 C C6 . DT A 1 1 ? 21.136 30.694 21.482 1.00 14.22 ? 1 DT A C6 1
ATOM 18 H H3 . DT A 1 1 ? 20.149 28.273 18.939 1.00 0.00 ? 1 DT A H3 1
ATOM 19 H "HO5'" . DT A 1 1 ? 25.263 30.835 24.004 1.00 0.00 ? 1 DT A "HO5'" 1
ATOM 20 P P . DA A 1 2 ? 24.766 25.974 24.683 1.00 23.53 ? 2 DA A P 1
ATOM 21 O OP1 . DA A 1 2 ? 24.819 25.775 26.131 1.00 27.65 ? 2 DA A OP1 1
ATOM 22 O OP2 . DA A 1 2 ? 25.964 25.990 23.827 1.00 38.21 ? 2 DA A OP2 1
ATOM 23 O "O5'" . DA A 1 2 ? 23.749 24.991 23.979 1.00 23.31 ? 2 DA A "O5'" 1
ATOM 24 C "C5'" . DA A 1 2 ? 22.350 25.133 24.144 1.00 31.45 ? 2 DA A "C5'" 1
ATOM 25 C "C4'" . DA A 1 2 ? 21.502 24.042 23.575 1.00 10.83 ? 2 DA A "C4'" 1
ATOM 26 O "O4'" . DA A 1 2 ? 20.221 24.252 24.204 1.00 36.32 ? 2 DA A "O4'" 1
ATOM 27 C "C3'" . DA A 1 2 ? 21.353 24.038 22.059 1.00 39.61 ? 2 DA A "C3'" 1
ATOM 28 O "O3'" . DA A 1 2 ? 22.218 23.042 21.474 1.00 19.31 ? 2 DA A "O3'" 1
ATOM 29 C "C2'" . DA A 1 2 ? 19.926 23.509 22.118 1.00 23.91 ? 2 DA A "C2'" 1
ATOM 30 C "C1'" . DA A 1 2 ? 19.171 24.220 23.257 1.00 29.47 ? 2 DA A "C1'" 1
ATOM 31 N N9 . DA A 1 2 ? 18.839 25.627 23.010 1.00 19.13 ? 2 DA A N9 1
ATOM 32 C C8 . DA A 1 2 ? 19.151 26.734 23.759 1.00 21.05 ? 2 DA A C8 1
ATOM 33 N N7 . DA A 1 2 ? 18.737 27.848 23.267 1.00 20.27 ? 2 DA A N7 1
ATOM 34 C C5 . DA A 1 2 ? 18.093 27.426 22.100 1.00 14.04 ? 2 DA A C5 1
ATOM 35 C C6 . DA A 1 2 ? 17.391 28.116 21.124 1.00 18.64 ? 2 DA A C6 1
ATOM 36 N N6 . DA A 1 2 ? 17.250 29.453 21.149 1.00 24.64 ? 2 DA A N6 1
ATOM 37 N N1 . DA A 1 2 ? 16.861 27.359 20.157 1.00 15.56 ? 2 DA A N1 1
ATOM 38 C C2 . DA A 1 2 ? 17.016 26.046 20.152 1.00 9.93 ? 2 DA A C2 1
ATOM 39 N N3 . DA A 1 2 ? 17.641 25.306 20.992 1.00 23.82 ? 2 DA A N3 1
ATOM 40 C C4 . DA A 1 2 ? 18.160 26.078 21.948 1.00 11.68 ? 2 DA A C4 1
ATOM 41 H H61 . DA A 1 2 ? 16.745 29.923 20.410 1.00 0.00 ? 2 DA A H61 1
ATOM 42 H H62 . DA A 1 2 ? 17.644 29.994 21.903 1.00 0.00 ? 2 DA A H62 1
ATOM 43 P P . DA A 1 3 ? 23.030 23.149 20.153 1.00 20.46 ? 3 DA A P 1
ATOM 44 O OP1 . DA A 1 3 ? 23.954 22.013 20.095 1.00 24.95 ? 3 DA A OP1 1
ATOM 45 O OP2 . DA A 1 3 ? 23.531 24.509 20.030 1.00 19.53 ? 3 DA A OP2 1
ATOM 46 O "O5'" . DA A 1 3 ? 21.880 22.885 19.163 1.00 17.18 ? 3 DA A "O5'" 1
ATOM 47 C "C5'" . DA A 1 3 ? 21.278 21.604 19.070 1.00 13.90 ? 3 DA A "C5'" 1
ATOM 48 C "C4'" . DA A 1 3 ? 20.159 21.601 18.065 1.00 21.24 ? 3 DA A "C4'" 1
ATOM 49 O "O4'" . DA A 1 3 ? 19.337 22.719 18.308 1.00 21.96 ? 3 DA A "O4'" 1
ATOM 50 C "C3'" . DA A 1 3 ? 20.581 21.983 16.756 1.00 22.35 ? 3 DA A "C3'" 1
ATOM 51 O "O3'" . DA A 1 3 ? 21.091 20.871 16.039 1.00 35.11 ? 3 DA A "O3'" 1
ATOM 52 C "C2'" . DA A 1 3 ? 19.323 22.493 16.117 1.00 36.04 ? 3 DA A "C2'" 1
ATOM 53 C "C1'" . DA A 1 3 ? 18.685 23.288 17.172 1.00 20.51 ? 3 DA A "C1'" 1
ATOM 54 N N9 . DA A 1 3 ? 18.982 24.750 17.163 1.00 14.73 ? 3 DA A N9 1
ATOM 55 C C8 . DA A 1 3 ? 19.499 25.507 18.166 1.00 8.55 ? 3 DA A C8 1
ATOM 56 N N7 . DA A 1 3 ? 19.478 26.769 17.943 1.00 16.60 ? 3 DA A N7 1
ATOM 57 C C5 . DA A 1 3 ? 18.913 26.871 16.693 1.00 12.55 ? 3 DA A C5 1
ATOM 58 C C6 . DA A 1 3 ? 18.601 27.989 15.881 1.00 20.70 ? 3 DA A C6 1
ATOM 59 N N6 . DA A 1 3 ? 18.741 29.276 16.217 1.00 14.67 ? 3 DA A N6 1
ATOM 60 N N1 . DA A 1 3 ? 18.060 27.707 14.701 1.00 13.89 ? 3 DA A N1 1
ATOM 61 C C2 . DA A 1 3 ? 17.850 26.408 14.389 1.00 29.53 ? 3 DA A C2 1
ATOM 62 N N3 . DA A 1 3 ? 18.083 25.275 15.052 1.00 18.60 ? 3 DA A N3 1
ATOM 63 C C4 . DA A 1 3 ? 18.625 25.618 16.218 1.00 8.22 ? 3 DA A C4 1
ATOM 64 H H61 . DA A 1 3 ? 18.524 30.004 15.551 1.00 0.00 ? 3 DA A H61 1
ATOM 65 H H62 . DA A 1 3 ? 19.059 29.517 17.142 1.00 0.00 ? 3 DA A H62 1
ATOM 66 P P . DC A 1 4 ? 22.425 21.041 15.096 1.00 24.23 ? 4 DC A P 1
ATOM 67 O OP1 . DC A 1 4 ? 22.465 19.788 14.318 1.00 29.54 ? 4 DC A OP1 1
ATOM 68 O OP2 . DC A 1 4 ? 23.569 21.448 15.939 1.00 26.74 ? 4 DC A OP2 1
ATOM 69 O "O5'" . DC A 1 4 ? 22.106 22.295 14.117 1.00 24.38 ? 4 DC A "O5'" 1
ATOM 70 C "C5'" . DC A 1 4 ? 21.326 22.363 12.942 1.00 23.31 ? 4 DC A "C5'" 1
ATOM 71 C "C4'" . DC A 1 4 ? 21.432 23.763 12.409 1.00 19.02 ? 4 DC A "C4'" 1
ATOM 72 O "O4'" . DC A 1 4 ? 20.924 24.622 13.375 1.00 13.89 ? 4 DC A "O4'" 1
ATOM 73 C "C3'" . DC A 1 4 ? 22.882 24.127 12.138 1.00 15.94 ? 4 DC A "C3'" 1
ATOM 74 O "O3'" . DC A 1 4 ? 23.153 23.807 10.751 1.00 33.78 ? 4 DC A "O3'" 1
ATOM 75 C "C2'" . DC A 1 4 ? 22.777 25.612 12.409 1.00 26.18 ? 4 DC A "C2'" 1
ATOM 76 C "C1'" . DC A 1 4 ? 21.638 25.802 13.441 1.00 6.99 ? 4 DC A "C1'" 1
ATOM 77 N N1 . DC A 1 4 ? 22.071 25.996 14.858 1.00 15.40 ? 4 DC A N1 1
ATOM 78 C C2 . DC A 1 4 ? 22.052 27.275 15.345 1.00 14.75 ? 4 DC A C2 1
ATOM 79 O O2 . DC A 1 4 ? 21.597 28.208 14.679 1.00 20.98 ? 4 DC A O2 1
ATOM 80 N N3 . DC A 1 4 ? 22.492 27.460 16.606 1.00 19.60 ? 4 DC A N3 1
ATOM 81 C C4 . DC A 1 4 ? 22.910 26.491 17.345 1.00 7.46 ? 4 DC A C4 1
ATOM 82 N N4 . DC A 1 4 ? 23.363 26.803 18.516 1.00 11.08 ? 4 DC A N4 1
ATOM 83 C C5 . DC A 1 4 ? 22.926 25.188 16.895 1.00 7.21 ? 4 DC A C5 1
ATOM 84 C C6 . DC A 1 4 ? 22.504 24.981 15.653 1.00 9.76 ? 4 DC A C6 1
ATOM 85 H H41 . DC A 1 4 ? 23.402 27.768 18.806 1.00 0.00 ? 4 DC A H41 1
ATOM 86 H H42 . DC A 1 4 ? 23.675 26.076 19.149 1.00 0.00 ? 4 DC A H42 1
ATOM 87 P P . DC A 1 5 ? 24.446 22.970 10.188 1.00 28.52 ? 5 DC A P 1
ATOM 88 O OP1 . DC A 1 5 ? 24.144 22.120 9.020 1.00 24.29 ? 5 DC A OP1 1
ATOM 89 O OP2 . DC A 1 5 ? 25.053 22.349 11.400 1.00 34.89 ? 5 DC A OP2 1
ATOM 90 O "O5'" . DC A 1 5 ? 25.373 24.138 9.643 1.00 30.47 ? 5 DC A "O5'" 1
ATOM 91 C "C5'" . DC A 1 5 ? 24.837 25.048 8.687 1.00 27.30 ? 5 DC A "C5'" 1
ATOM 92 C "C4'" . DC A 1 5 ? 25.648 26.351 8.642 1.00 20.98 ? 5 DC A "C4'" 1
ATOM 93 O "O4'" . DC A 1 5 ? 25.627 26.952 9.905 1.00 21.19 ? 5 DC A "O4'" 1
ATOM 94 C "C3'" . DC A 1 5 ? 27.100 26.119 8.375 1.00 20.71 ? 5 DC A "C3'" 1
ATOM 95 O "O3'" . DC A 1 5 ? 27.341 25.805 7.002 1.00 23.11 ? 5 DC A "O3'" 1
ATOM 96 C "C2'" . DC A 1 5 ? 27.496 27.486 8.703 1.00 13.44 ? 5 DC A "C2'" 1
ATOM 97 C "C1'" . DC A 1 5 ? 26.696 27.830 9.919 1.00 13.82 ? 5 DC A "C1'" 1
ATOM 98 N N1 . DC A 1 5 ? 27.308 27.595 11.235 1.00 22.24 ? 5 DC A N1 1
ATOM 99 C C2 . DC A 1 5 ? 27.581 28.683 11.989 1.00 9.58 ? 5 DC A C2 1
ATOM 100 O O2 . DC A 1 5 ? 27.383 29.828 11.573 1.00 25.04 ? 5 DC A O2 1
ATOM 101 N N3 . DC A 1 5 ? 28.050 28.457 13.220 1.00 23.52 ? 5 DC A N3 1
ATOM 102 C C4 . DC A 1 5 ? 28.242 27.259 13.710 1.00 9.77 ? 5 DC A C4 1
ATOM 103 N N4 . DC A 1 5 ? 28.680 27.143 14.947 1.00 20.94 ? 5 DC A N4 1
ATOM 104 C C5 . DC A 1 5 ? 27.978 26.108 12.961 1.00 15.31 ? 5 DC A C5 1
ATOM 105 C C6 . DC A 1 5 ? 27.515 26.334 11.726 1.00 20.31 ? 5 DC A C6 1
ATOM 106 H H41 . DC A 1 5 ? 28.833 26.230 15.355 1.00 0.00 ? 5 DC A H41 1
ATOM 107 H H42 . DC A 1 5 ? 28.860 27.971 15.496 1.00 0.00 ? 5 DC A H42 1
ATOM 108 P P . DC A 1 6 ? 28.699 25.257 6.381 1.00 26.27 ? 6 DC A P 1
ATOM 109 O OP1 . DC A 1 6 ? 28.416 24.653 5.094 1.00 29.77 ? 6 DC A OP1 1
ATOM 110 O OP2 . DC A 1 6 ? 29.457 24.544 7.410 1.00 23.78 ? 6 DC A OP2 1
ATOM 111 O "O5'" . DC A 1 6 ? 29.520 26.539 6.046 1.00 32.49 ? 6 DC A "O5'" 1
ATOM 112 C "C5'" . DC A 1 6 ? 29.282 27.692 5.226 1.00 30.24 ? 6 DC A "C5'" 1
ATOM 113 C "C4'" . DC A 1 6 ? 30.531 28.674 5.429 1.00 22.63 ? 6 DC A "C4'" 1
ATOM 114 O "O4'" . DC A 1 6 ? 30.781 28.988 6.818 1.00 18.93 ? 6 DC A "O4'" 1
ATOM 115 C "C3'" . DC A 1 6 ? 31.823 27.970 5.079 1.00 28.36 ? 6 DC A "C3'" 1
ATOM 116 O "O3'" . DC A 1 6 ? 32.102 28.065 3.709 1.00 27.07 ? 6 DC A "O3'" 1
ATOM 117 C "C2'" . DC A 1 6 ? 32.812 28.770 5.808 1.00 13.00 ? 6 DC A "C2'" 1
ATOM 118 C "C1'" . DC A 1 6 ? 32.139 29.157 7.068 1.00 9.92 ? 6 DC A "C1'" 1
ATOM 119 N N1 . DC A 1 6 ? 32.607 28.338 8.228 1.00 22.07 ? 6 DC A N1 1
ATOM 120 C C2 . DC A 1 6 ? 33.155 29.092 9.255 1.00 26.49 ? 6 DC A C2 1
ATOM 121 O O2 . DC A 1 6 ? 33.154 30.333 9.252 1.00 26.06 ? 6 DC A O2 1
ATOM 122 N N3 . DC A 1 6 ? 33.673 28.433 10.285 1.00 17.53 ? 6 DC A N3 1
ATOM 123 C C4 . DC A 1 6 ? 33.677 27.152 10.362 1.00 7.84 ? 6 DC A C4 1
ATOM 124 N N4 . DC A 1 6 ? 34.255 26.711 11.432 1.00 17.65 ? 6 DC A N4 1
ATOM 125 C C5 . DC A 1 6 ? 33.130 26.339 9.369 1.00 9.69 ? 6 DC A C5 1
ATOM 126 C C6 . DC A 1 6 ? 32.596 26.974 8.310 1.00 25.15 ? 6 DC A C6 1
ATOM 127 H "HO3'" . DC A 1 6 ? 31.406 27.590 3.246 1.00 0.00 ? 6 DC A "HO3'" 1
ATOM 128 H H41 . DC A 1 6 ? 34.358 25.716 11.590 1.00 0.00 ? 6 DC A H41 1
ATOM 129 H H42 . DC A 1 6 ? 34.605 27.355 12.121 1.00 0.00 ? 6 DC A H42 1
ATOM 130 O "O5'" . DT B 1 1 ? 11.293 29.851 15.858 1.00 28.85 ? 7 DT B "O5'" 1
ATOM 131 C "C5'" . DT B 1 1 ? 11.549 31.182 16.395 1.00 25.35 ? 7 DT B "C5'" 1
ATOM 132 C "C4'" . DT B 1 1 ? 12.980 31.877 16.290 1.00 39.66 ? 7 DT B "C4'" 1
ATOM 133 O "O4'" . DT B 1 1 ? 14.126 31.292 17.044 1.00 37.54 ? 7 DT B "O4'" 1
ATOM 134 C "C3'" . DT B 1 1 ? 13.456 31.813 14.854 1.00 39.01 ? 7 DT B "C3'" 1
ATOM 135 O "O3'" . DT B 1 1 ? 14.165 32.997 14.544 1.00 38.98 ? 7 DT B "O3'" 1
ATOM 136 C "C2'" . DT B 1 1 ? 14.424 30.692 14.753 1.00 20.58 ? 7 DT B "C2'" 1
ATOM 137 C "C1'" . DT B 1 1 ? 14.994 30.617 16.125 1.00 20.74 ? 7 DT B "C1'" 1
ATOM 138 N N1 . DT B 1 1 ? 15.053 29.255 16.540 1.00 18.62 ? 7 DT B N1 1
ATOM 139 C C2 . DT B 1 1 ? 15.671 29.004 17.731 1.00 20.33 ? 7 DT B C2 1
ATOM 140 O O2 . DT B 1 1 ? 16.113 29.817 18.554 1.00 26.72 ? 7 DT B O2 1
ATOM 141 N N3 . DT B 1 1 ? 15.786 27.715 18.009 1.00 22.63 ? 7 DT B N3 1
ATOM 142 C C4 . DT B 1 1 ? 15.361 26.621 17.272 1.00 33.64 ? 7 DT B C4 1
ATOM 143 O O4 . DT B 1 1 ? 15.606 25.447 17.626 1.00 34.71 ? 7 DT B O4 1
ATOM 144 C C5 . DT B 1 1 ? 14.708 26.988 16.073 1.00 14.16 ? 7 DT B C5 1
ATOM 145 C C7 . DT B 1 1 ? 14.102 25.888 15.216 1.00 39.75 ? 7 DT B C7 1
ATOM 146 C C6 . DT B 1 1 ? 14.575 28.259 15.732 1.00 24.49 ? 7 DT B C6 1
ATOM 147 H H3 . DT B 1 1 ? 16.244 27.571 18.880 1.00 0.00 ? 7 DT B H3 1
ATOM 148 H "HO5'" . DT B 1 1 ? 11.404 29.913 14.905 1.00 0.00 ? 7 DT B "HO5'" 1
ATOM 149 P P . DA B 1 2 ? 13.931 33.345 13.024 1.00 39.22 ? 8 DA B P 1
ATOM 150 O OP1 . DA B 1 2 ? 12.612 34.036 13.039 1.00 34.77 ? 8 DA B OP1 1
ATOM 151 O OP2 . DA B 1 2 ? 14.206 32.074 12.263 1.00 39.31 ? 8 DA B OP2 1
ATOM 152 O "O5'" . DA B 1 2 ? 15.000 34.463 12.432 1.00 39.80 ? 8 DA B "O5'" 1
ATOM 153 C "C5'" . DA B 1 2 ? 16.303 34.113 11.867 1.00 39.02 ? 8 DA B "C5'" 1
ATOM 154 C "C4'" . DA B 1 2 ? 17.406 35.058 12.322 1.00 17.13 ? 8 DA B "C4'" 1
ATOM 155 O "O4'" . DA B 1 2 ? 16.819 36.368 12.502 1.00 22.28 ? 8 DA B "O4'" 1
ATOM 156 C "C3'" . DA B 1 2 ? 18.055 34.660 13.684 1.00 35.33 ? 8 DA B "C3'" 1
ATOM 157 O "O3'" . DA B 1 2 ? 19.437 35.008 13.398 1.00 39.28 ? 8 DA B "O3'" 1
ATOM 158 C "C2'" . DA B 1 2 ? 17.310 35.602 14.642 1.00 35.21 ? 8 DA B "C2'" 1
ATOM 159 C "C1'" . DA B 1 2 ? 17.143 36.915 13.808 1.00 14.63 ? 8 DA B "C1'" 1
ATOM 160 N N9 . DA B 1 2 ? 16.003 37.727 14.228 1.00 20.81 ? 8 DA B N9 1
ATOM 161 C C8 . DA B 1 2 ? 14.676 37.344 14.239 1.00 37.43 ? 8 DA B C8 1
ATOM 162 N N7 . DA B 1 2 ? 13.839 38.247 14.635 1.00 23.05 ? 8 DA B N7 1
ATOM 163 C C5 . DA B 1 2 ? 14.647 39.318 14.912 1.00 19.42 ? 8 DA B C5 1
ATOM 164 C C6 . DA B 1 2 ? 14.326 40.578 15.398 1.00 14.47 ? 8 DA B C6 1
ATOM 165 N N6 . DA B 1 2 ? 13.065 41.064 15.553 1.00 20.96 ? 8 DA B N6 1
ATOM 166 N N1 . DA B 1 2 ? 15.373 41.351 15.597 1.00 33.53 ? 8 DA B N1 1
ATOM 167 C C2 . DA B 1 2 ? 16.622 40.929 15.326 1.00 27.49 ? 8 DA B C2 1
ATOM 168 N N3 . DA B 1 2 ? 17.042 39.778 14.845 1.00 27.07 ? 8 DA B N3 1
ATOM 169 C C4 . DA B 1 2 ? 15.968 39.007 14.666 1.00 10.79 ? 8 DA B C4 1
ATOM 170 H H61 . DA B 1 2 ? 12.269 40.498 15.302 1.00 0.00 ? 8 DA B H61 1
ATOM 171 H H62 . DA B 1 2 ? 12.942 41.998 15.918 1.00 0.00 ? 8 DA B H62 1
ATOM 172 P P . DA B 1 3 ? 20.719 34.445 14.194 1.00 35.42 ? 9 DA B P 1
ATOM 173 O OP1 . DA B 1 3 ? 21.959 35.022 13.557 1.00 39.82 ? 9 DA B OP1 1
ATOM 174 O OP2 . DA B 1 3 ? 20.528 32.939 14.321 1.00 28.79 ? 9 DA B OP2 1
ATOM 175 O "O5'" . DA B 1 3 ? 20.556 35.250 15.553 1.00 39.94 ? 9 DA B "O5'" 1
ATOM 176 C "C5'" . DA B 1 3 ? 21.196 36.518 15.727 1.00 27.77 ? 9 DA B "C5'" 1
ATOM 177 C "C4'" . DA B 1 3 ? 20.828 37.045 17.056 1.00 16.24 ? 9 DA B "C4'" 1
ATOM 178 O "O4'" . DA B 1 3 ? 19.420 37.260 17.115 1.00 24.83 ? 9 DA B "O4'" 1
ATOM 179 C "C3'" . DA B 1 3 ? 21.131 36.015 18.071 1.00 22.96 ? 9 DA B "C3'" 1
ATOM 180 O "O3'" . DA B 1 3 ? 21.775 36.603 19.212 1.00 29.07 ? 9 DA B "O3'" 1
ATOM 181 C "C2'" . DA B 1 3 ? 19.740 35.550 18.407 1.00 26.00 ? 9 DA B "C2'" 1
ATOM 182 C "C1'" . DA B 1 3 ? 18.975 36.797 18.352 1.00 18.88 ? 9 DA B "C1'" 1
ATOM 183 N N9 . DA B 1 3 ? 17.533 36.628 18.310 1.00 17.60 ? 9 DA B N9 1
ATOM 184 C C8 . DA B 1 3 ? 16.740 35.511 18.232 1.00 23.85 ? 9 DA B C8 1
ATOM 185 N N7 . DA B 1 3 ? 15.467 35.795 18.264 1.00 25.36 ? 9 DA B N7 1
ATOM 186 C C5 . DA B 1 3 ? 15.416 37.185 18.373 1.00 14.91 ? 9 DA B C5 1
ATOM 187 C C6 . DA B 1 3 ? 14.358 38.117 18.472 1.00 24.27 ? 9 DA B C6 1
ATOM 188 N N6 . DA B 1 3 ? 13.051 37.812 18.565 1.00 30.71 ? 9 DA B N6 1
ATOM 189 N N1 . DA B 1 3 ? 14.730 39.429 18.573 1.00 34.89 ? 9 DA B N1 1
ATOM 190 C C2 . DA B 1 3 ? 16.025 39.778 18.587 1.00 15.13 ? 9 DA B C2 1
ATOM 191 N N3 . DA B 1 3 ? 17.077 38.975 18.506 1.00 18.79 ? 9 DA B N3 1
ATOM 192 C C4 . DA B 1 3 ? 16.688 37.686 18.401 1.00 21.13 ? 9 DA B C4 1
ATOM 193 H H61 . DA B 1 3 ? 12.726 36.865 18.446 1.00 0.00 ? 9 DA B H61 1
ATOM 194 H H62 . DA B 1 3 ? 12.408 38.552 18.781 1.00 0.00 ? 9 DA B H62 1
ATOM 195 P P . DC B 1 4 ? 23.405 36.738 19.343 1.00 28.67 ? 10 DC B P 1
ATOM 196 O OP1 . DC B 1 4 ? 23.679 37.914 20.242 1.00 34.27 ? 10 DC B OP1 1
ATOM 197 O OP2 . DC B 1 4 ? 23.910 36.731 17.961 1.00 38.84 ? 10 DC B OP2 1
ATOM 198 O "O5'" . DC B 1 4 ? 24.087 35.454 20.011 1.00 18.77 ? 10 DC B "O5'" 1
ATOM 199 C "C5'" . DC B 1 4 ? 24.087 35.100 21.368 1.00 30.20 ? 10 DC B "C5'" 1
ATOM 200 C "C4'" . DC B 1 4 ? 24.575 33.695 21.529 1.00 9.80 ? 10 DC B "C4'" 1
ATOM 201 O "O4'" . DC B 1 4 ? 23.800 32.700 20.879 1.00 18.83 ? 10 DC B "O4'" 1
ATOM 202 C "C3'" . DC B 1 4 ? 25.878 33.620 20.926 1.00 14.61 ? 10 DC B "C3'" 1
ATOM 203 O "O3'" . DC B 1 4 ? 26.615 32.959 21.958 1.00 36.36 ? 10 DC B "O3'" 1
ATOM 204 C "C2'" . DC B 1 4 ? 25.606 32.814 19.678 1.00 19.97 ? 10 DC B "C2'" 1
ATOM 205 C "C1'" . DC B 1 4 ? 24.481 31.842 19.992 1.00 15.38 ? 10 DC B "C1'" 1
ATOM 206 N N1 . DC B 1 4 ? 23.686 31.565 18.773 1.00 11.72 ? 10 DC B N1 1
ATOM 207 C C2 . DC B 1 4 ? 23.456 30.308 18.325 1.00 11.51 ? 10 DC B C2 1
ATOM 208 O O2 . DC B 1 4 ? 23.748 29.333 18.974 1.00 25.69 ? 10 DC B O2 1
ATOM 209 N N3 . DC B 1 4 ? 22.811 30.099 17.201 1.00 14.49 ? 10 DC B N3 1
ATOM 210 C C4 . DC B 1 4 ? 22.370 31.109 16.513 1.00 12.31 ? 10 DC B C4 1
ATOM 211 N N4 . DC B 1 4 ? 21.662 30.932 15.398 1.00 25.78 ? 10 DC B N4 1
ATOM 212 C C5 . DC B 1 4 ? 22.573 32.400 16.939 1.00 14.33 ? 10 DC B C5 1
ATOM 213 C C6 . DC B 1 4 ? 23.237 32.570 18.074 1.00 13.01 ? 10 DC B C6 1
ATOM 214 H H41 . DC B 1 4 ? 21.523 29.994 15.042 1.00 0.00 ? 10 DC B H41 1
ATOM 215 H H42 . DC B 1 4 ? 21.261 31.720 14.909 1.00 0.00 ? 10 DC B H42 1
ATOM 216 P P . DC B 1 5 ? 28.130 33.237 22.467 1.00 34.54 ? 11 DC B P 1
ATOM 217 O OP1 . DC B 1 5 ? 28.322 32.261 23.594 1.00 29.17 ? 11 DC B OP1 1
ATOM 218 O OP2 . DC B 1 5 ? 28.366 34.724 22.567 1.00 26.05 ? 11 DC B OP2 1
ATOM 219 O "O5'" . DC B 1 5 ? 28.851 32.747 21.146 1.00 29.65 ? 11 DC B "O5'" 1
ATOM 220 C "C5'" . DC B 1 5 ? 30.240 32.966 20.860 1.00 31.52 ? 11 DC B "C5'" 1
ATOM 221 C "C4'" . DC B 1 5 ? 30.646 31.847 19.984 1.00 13.84 ? 11 DC B "C4'" 1
ATOM 222 O "O4'" . DC B 1 5 ? 29.762 31.772 18.892 1.00 25.81 ? 11 DC B "O4'" 1
ATOM 223 C "C3'" . DC B 1 5 ? 32.016 32.042 19.492 1.00 15.90 ? 11 DC B "C3'" 1
ATOM 224 O "O3'" . DC B 1 5 ? 32.776 31.224 20.405 1.00 35.61 ? 11 DC B "O3'" 1
ATOM 225 C "C2'" . DC B 1 5 ? 31.886 31.528 18.055 1.00 19.50 ? 11 DC B "C2'" 1
ATOM 226 C "C1'" . DC B 1 5 ? 30.453 31.059 17.897 1.00 14.84 ? 11 DC B "C1'" 1
ATOM 227 N N1 . DC B 1 5 ? 29.801 31.387 16.621 1.00 8.89 ? 11 DC B N1 1
ATOM 228 C C2 . DC B 1 5 ? 29.420 30.373 15.896 1.00 10.51 ? 11 DC B C2 1
ATOM 229 O O2 . DC B 1 5 ? 29.691 29.265 16.247 1.00 16.37 ? 11 DC B O2 1
ATOM 230 N N3 . DC B 1 5 ? 28.767 30.545 14.789 1.00 14.37 ? 11 DC B N3 1
ATOM 231 C C4 . DC B 1 5 ? 28.472 31.744 14.372 1.00 8.47 ? 11 DC B C4 1
ATOM 232 N N4 . DC B 1 5 ? 27.746 31.854 13.292 1.00 24.16 ? 11 DC B N4 1
ATOM 233 C C5 . DC B 1 5 ? 28.866 32.886 15.096 1.00 19.21 ? 11 DC B C5 1
ATOM 234 C C6 . DC B 1 5 ? 29.541 32.630 16.236 1.00 19.62 ? 11 DC B C6 1
ATOM 235 H H41 . DC B 1 5 ? 27.427 32.762 12.970 1.00 0.00 ? 11 DC B H41 1
ATOM 236 H H42 . DC B 1 5 ? 27.498 31.025 12.770 1.00 0.00 ? 11 DC B H42 1
ATOM 237 P P . DC B 1 6 ? 34.436 31.147 20.578 1.00 35.23 ? 12 DC B P 1
ATOM 238 O OP1 . DC B 1 6 ? 34.764 29.859 21.271 1.00 39.08 ? 12 DC B OP1 1
ATOM 239 O OP2 . DC B 1 6 ? 34.907 32.477 21.122 1.00 36.25 ? 12 DC B OP2 1
ATOM 240 O "O5'" . DC B 1 6 ? 35.015 30.931 19.062 1.00 30.38 ? 12 DC B "O5'" 1
ATOM 241 C "C5'" . DC B 1 6 ? 36.391 30.665 18.739 1.00 30.68 ? 12 DC B "C5'" 1
ATOM 242 C "C4'" . DC B 1 6 ? 36.518 29.663 17.628 1.00 28.20 ? 12 DC B "C4'" 1
ATOM 243 O "O4'" . DC B 1 6 ? 35.889 30.201 16.528 1.00 29.99 ? 12 DC B "O4'" 1
ATOM 244 C "C3'" . DC B 1 6 ? 37.900 29.433 17.125 1.00 23.57 ? 12 DC B "C3'" 1
ATOM 245 O "O3'" . DC B 1 6 ? 38.418 28.232 17.727 1.00 39.77 ? 12 DC B "O3'" 1
ATOM 246 C "C2'" . DC B 1 6 ? 37.691 29.249 15.673 1.00 21.13 ? 12 DC B "C2'" 1
ATOM 247 C "C1'" . DC B 1 6 ? 36.254 29.370 15.451 1.00 17.03 ? 12 DC B "C1'" 1
ATOM 248 N N1 . DC B 1 6 ? 35.819 30.088 14.254 1.00 9.75 ? 12 DC B N1 1
ATOM 249 C C2 . DC B 1 6 ? 35.372 29.340 13.243 1.00 20.35 ? 12 DC B C2 1
ATOM 250 O O2 . DC B 1 6 ? 35.274 28.103 13.297 1.00 21.58 ? 12 DC B O2 1
ATOM 251 N N3 . DC B 1 6 ? 34.928 30.008 12.187 1.00 14.37 ? 12 DC B N3 1
ATOM 252 C C4 . DC B 1 6 ? 34.893 31.316 12.097 1.00 11.85 ? 12 DC B C4 1
ATOM 253 N N4 . DC B 1 6 ? 34.397 31.868 10.987 1.00 17.73 ? 12 DC B N4 1
ATOM 254 C C5 . DC B 1 6 ? 35.351 32.092 13.152 1.00 12.20 ? 12 DC B C5 1
ATOM 255 C C6 . DC B 1 6 ? 35.811 31.425 14.209 1.00 15.76 ? 12 DC B C6 1
ATOM 256 H "HO3'" . DC B 1 6 ? 38.451 28.385 18.677 1.00 0.00 ? 12 DC B "HO3'" 1
ATOM 257 H H41 . DC B 1 6 ? 34.400 32.875 10.890 1.00 0.00 ? 12 DC B H41 1
ATOM 258 H H42 . DC B 1 6 ? 34.013 31.291 10.256 1.00 0.00 ? 12 DC B H42 1
HETATM 259 O O . HOH C 2 . ? 28.213 22.100 27.530 1.00 42.22 ? 13 HOH A O 1
HETATM 260 O O . HOH C 2 . ? 26.586 21.386 7.132 1.00 44.58 ? 14 HOH A O 1
HETATM 261 O O . HOH C 2 . ? 21.619 32.763 24.469 1.00 36.66 ? 15 HOH A O 1
HETATM 262 O O . HOH C 2 . ? 28.321 21.893 10.903 1.00 34.10 ? 16 HOH A O 1
HETATM 263 O O . HOH C 2 . ? 22.484 26.473 28.343 1.00 38.32 ? 20 HOH A O 1
HETATM 264 O O . HOH C 2 . ? 19.359 34.276 23.539 1.00 31.79 ? 21 HOH A O 1
HETATM 265 O O . HOH C 2 . ? 20.296 23.598 9.052 1.00 39.71 ? 22 HOH A O 1
HETATM 266 O O . HOH C 2 . ? 28.013 24.110 25.005 1.00 29.37 ? 24 HOH A O 1
HETATM 267 O O . HOH C 2 . ? 29.595 24.355 16.471 1.00 35.57 ? 30 HOH A O 1
HETATM 268 O O . HOH C 2 . ? 34.129 23.669 11.033 1.00 30.44 ? 31 HOH A O 1
HETATM 269 O O . HOH C 2 . ? 26.296 25.396 21.262 1.00 22.48 ? 32 HOH A O 1
HETATM 270 O O . HOH C 2 . ? 29.926 21.907 4.334 1.00 43.21 ? 33 HOH A O 1
HETATM 271 O O . HOH C 2 . ? 25.342 21.361 22.578 1.00 27.71 ? 34 HOH A O 1
HETATM 272 O O . HOH D 2 . ? 21.384 39.724 15.164 1.00 37.35 ? 17 HOH B O 1
HETATM 273 O O . HOH D 2 . ? 15.873 22.366 19.329 1.00 48.06 ? 18 HOH B O 1
HETATM 274 O O . HOH D 2 . ? 18.356 32.435 15.970 1.00 25.93 ? 19 HOH B O 1
HETATM 275 O O . HOH D 2 . ? 41.100 27.441 15.831 1.00 27.63 ? 23 HOH B O 1
HETATM 276 O O . HOH D 2 . ? 22.484 34.287 11.145 1.00 40.90 ? 25 HOH B O 1
HETATM 277 O O . HOH D 2 . ? 12.592 34.741 18.612 1.00 23.80 ? 26 HOH B O 1
HETATM 278 O O . HOH D 2 . ? 11.090 39.558 17.897 1.00 41.31 ? 27 HOH B O 1
HETATM 279 O O . HOH D 2 . ? 13.559 32.507 19.884 1.00 29.78 ? 28 HOH B O 1
HETATM 280 O O . HOH D 2 . ? 34.412 35.088 10.781 1.00 21.68 ? 29 HOH B O 1
HETATM 281 O O . HOH D 2 . ? 19.923 40.404 18.291 1.00 31.79 ? 35 HOH B O 1
HETATM 282 O O . HOH D 2 . ? 18.633 37.421 10.594 1.00 28.62 ? 36 HOH B O 1
HETATM 283 O O . HOH D 2 . ? 41.530 30.514 14.417 1.00 36.59 ? 37 HOH B O 1
HETATM 284 O O . HOH D 2 . ? 26.648 34.690 11.974 1.00 32.48 ? 38 HOH B O 1
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