data_1R3Z
#
_entry.id 1R3Z
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.386
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1R3Z pdb_00001r3z 10.2210/pdb1r3z/pdb
NDB UD0044 ? ?
RCSB RCSB020407 ? ?
WWPDB D_1000020407 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2003-12-23
2 'Structure model' 1 1 2008-04-29
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2017-10-11
5 'Structure model' 1 4 2024-02-14
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Refinement description'
4 5 'Structure model' 'Data collection'
5 5 'Structure model' 'Database references'
6 5 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' software
2 5 'Structure model' chem_comp_atom
3 5 'Structure model' chem_comp_bond
4 5 'Structure model' database_2
5 5 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_database_2.pdbx_DOI'
2 5 'Structure model' '_database_2.pdbx_database_accession'
3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1R3Z
_pdbx_database_status.recvd_initial_deposition_date 2003-10-03
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 1R41
_pdbx_database_related.details
'Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers'
_pdbx_database_related.content_type unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Shi, K.' 1
'Pan, B.' 2
'Tippin, D.' 3
'Sundaralingam, M.' 4
#
_citation.id primary
_citation.title
'Structures of d(Gm5)CGm5CGCGC) and d(GCGCGm5CGm5C): effects of methylation on alternating DNA octamers.'
_citation.journal_abbrev 'Acta Crystallogr.,Sect.D'
_citation.journal_volume 60
_citation.page_first 61
_citation.page_last 65
_citation.year 2004
_citation.journal_id_ASTM ABCRE6
_citation.country DK
_citation.journal_id_ISSN 0907-4449
_citation.journal_id_CSD 0766
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 14684893
_citation.pdbx_database_id_DOI 10.1107/S0907444903021899
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Shi, K.' 1 ?
primary 'Pan, B.' 2 ?
primary 'Tippin, D.' 3 ?
primary 'Sundaralingam, M.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3'" 2456.647 1 ? ? ? ?
2 water nat water 18.015 25 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(5CM)(DG)(5CM)(DG)(DC)(DG)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GCGCGCGC
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 5CM n
1 3 DG n
1 4 5CM n
1 5 DG n
1 6 DC n
1 7 DG n
1 8 DC n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'DNA Synthesizer'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG GUA A . n
A 1 2 5CM 2 2 2 5CM CYM A . n
A 1 3 DG 3 3 3 DG GUA A . n
A 1 4 5CM 4 4 4 5CM CYM A . n
A 1 5 DG 5 5 5 DG GUA A . n
A 1 6 DC 6 6 6 DC CYT A . n
A 1 7 DG 7 7 7 DG GUA A . n
A 1 8 DC 8 8 8 DC CYT A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 101 101 HOH WAT A .
B 2 HOH 2 102 102 HOH WAT A .
B 2 HOH 3 103 103 HOH WAT A .
B 2 HOH 4 105 105 HOH WAT A .
B 2 HOH 5 106 106 HOH WAT A .
B 2 HOH 6 107 107 HOH WAT A .
B 2 HOH 7 108 108 HOH WAT A .
B 2 HOH 8 109 109 HOH WAT A .
B 2 HOH 9 110 110 HOH WAT A .
B 2 HOH 10 111 111 HOH WAT A .
B 2 HOH 11 112 112 HOH WAT A .
B 2 HOH 12 113 113 HOH WAT A .
B 2 HOH 13 114 114 HOH WAT A .
B 2 HOH 14 115 115 HOH WAT A .
B 2 HOH 15 116 116 HOH WAT A .
B 2 HOH 16 117 117 HOH WAT A .
B 2 HOH 17 118 118 HOH WAT A .
B 2 HOH 18 119 119 HOH WAT A .
B 2 HOH 19 120 120 HOH WAT A .
B 2 HOH 20 121 121 HOH WAT A .
B 2 HOH 21 122 122 HOH WAT A .
B 2 HOH 22 123 123 HOH WAT A .
B 2 HOH 23 124 124 HOH WAT A .
B 2 HOH 24 125 125 HOH WAT A .
B 2 HOH 25 126 126 HOH WAT A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
SCALEPACK 'data scaling' . ? 1
CNS refinement . ? 2
CNS phasing . ? 3
#
_cell.entry_id 1R3Z
_cell.length_a 42.97
_cell.length_b 42.97
_cell.length_c 24.93
_cell.angle_alpha 90
_cell.angle_beta 90
_cell.angle_gamma 90
_cell.pdbx_unique_axis ?
_cell.Z_PDB 8
#
_symmetry.entry_id 1R3Z
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.Int_Tables_number 96
_symmetry.cell_setting ?
#
_exptl.entry_id 1R3Z
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.25
_exptl_crystal.density_percent_sol 45.43
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.0
_exptl_crystal_grow.pdbx_details
'cacodylate, magnesium chloride, spermine tetrachloride, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K'
_exptl_crystal_grow.pdbx_pH_range .
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 cacodylate ? ? ?
1 2 1 'magnesium chloride' ? ? ?
1 3 1 'spermine tetrachloride' ? ? ?
1 4 1 H2O ? ? ?
1 5 2 cacodylate ? ? ?
1 6 2 'magnesium chloride' ? ? ?
1 7 2 'spermine tetrachloride' ? ? ?
1 8 2 H2O ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 298
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator GRAPHITE
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1R3Z
_reflns.observed_criterion_sigma_F 0
_reflns.observed_criterion_sigma_I 0
_reflns.d_resolution_high 1.7
_reflns.d_resolution_low 10
_reflns.number_all 2799
_reflns.number_obs 2540
_reflns.percent_possible_obs 90.7
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.7
_reflns_shell.d_res_low ?
_reflns_shell.percent_possible_all 90.7
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1R3Z
_refine.ls_d_res_high 1.7
_refine.ls_d_res_low 10
_refine.pdbx_ls_sigma_F 0
_refine.pdbx_ls_sigma_I ?
_refine.ls_number_reflns_all 2540
_refine.ls_number_reflns_obs 2311
_refine.ls_number_reflns_R_free 229
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_all 0.193
_refine.ls_R_factor_obs 0.193
_refine.ls_R_factor_R_work 0.17
_refine.ls_R_factor_R_free 0.203
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_method_to_determine_struct 'Molecular Placement'
_refine.pdbx_starting_model ?
_refine.pdbx_ls_cross_valid_method ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.details ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_B ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 163
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 25
_refine_hist.number_atoms_total 188
_refine_hist.d_res_high 1.7
_refine_hist.d_res_low 10
#
_database_PDB_matrix.entry_id 1R3Z
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1R3Z
_struct.title
'Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1R3Z
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text DNA
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1R3Z
_struct_ref.pdbx_db_accession 1R3Z
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1R3Z
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 8
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 1R3Z
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 8
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 8
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.pdbx_parent_biol_id ?
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A 5CM 2 P ? ? A DG 1 A 5CM 2 1_555 ? ? ? ? ? ? ? 1.626 ? ?
covale2 covale both ? A 5CM 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A 5CM 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.618 ? ?
covale3 covale both ? A DG 3 "O3'" ? ? ? 1_555 A 5CM 4 P ? ? A DG 3 A 5CM 4 1_555 ? ? ? ? ? ? ? 1.613 ? ?
covale4 covale both ? A 5CM 4 "O3'" ? ? ? 1_555 A DG 5 P ? ? A 5CM 4 A DG 5 1_555 ? ? ? ? ? ? ? 1.612 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A 5CM 2 N3 ? ? ? 1_555 A DG 7 N1 ? ? A 5CM 2 A DG 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A 5CM 2 N4 ? ? ? 1_555 A DG 7 O6 ? ? A 5CM 2 A DG 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A 5CM 2 O2 ? ? ? 1_555 A DG 7 N2 ? ? A 5CM 2 A DG 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 3 A DC 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 3 A DC 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 3 A DC 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A 5CM 4 N3 ? ? ? 1_555 A DG 5 N1 ? ? A 5CM 4 A DG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A 5CM 4 N4 ? ? ? 1_555 A DG 5 O6 ? ? A 5CM 4 A DG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A 5CM 4 O2 ? ? ? 1_555 A DG 5 N2 ? ? A 5CM 4 A DG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A 5CM 4 N3 ? ? A DG 5 A 5CM 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A 5CM 4 O2 ? ? A DG 5 A 5CM 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A 5CM 4 N4 ? ? A DG 5 A 5CM 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 6 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 6 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 6 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A 5CM 2 N3 ? ? A DG 7 A 5CM 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A 5CM 2 O2 ? ? A DG 7 A 5CM 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A 5CM 2 N4 ? ? A DG 7 A 5CM 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C6 A DG 3 ? ? O6 A DG 3 ? ? 1.182 1.237 -0.055 0.009 N
2 1 N3 A DG 7 ? ? C4 A DG 7 ? ? 1.292 1.350 -0.058 0.007 N
3 1 C8 A DG 7 ? ? N9 A DG 7 ? ? 1.323 1.374 -0.051 0.007 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O3'" A DG 3 ? ? P A 5CM 4 ? ? OP2 A 5CM 4 ? ? 120.02 110.50 9.52 1.10 Y
2 1 "O3'" A DC 6 ? ? P A DG 7 ? ? OP2 A DG 7 ? ? 118.41 110.50 7.91 1.10 Y
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A 5CM 2 A 5CM 2 ? DC ?
2 A 5CM 4 A 5CM 4 ? DC ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
5CM N1 N N N 1
5CM C2 C N N 2
5CM N3 N N N 3
5CM C4 C N N 4
5CM C5 C N N 5
5CM C5A C N N 6
5CM C6 C N N 7
5CM O2 O N N 8
5CM N4 N N N 9
5CM "C1'" C N R 10
5CM "C2'" C N N 11
5CM "C3'" C N S 12
5CM "C4'" C N R 13
5CM "O4'" O N N 14
5CM "O3'" O N N 15
5CM "C5'" C N N 16
5CM "O5'" O N N 17
5CM P P N N 18
5CM OP1 O N N 19
5CM OP2 O N N 20
5CM OP3 O N N 21
5CM H5A1 H N N 22
5CM H5A2 H N N 23
5CM H5A3 H N N 24
5CM H6 H N N 25
5CM HN41 H N N 26
5CM HN42 H N N 27
5CM "H1'" H N N 28
5CM "H2'" H N N 29
5CM "H2''" H N N 30
5CM "H3'" H N N 31
5CM "H4'" H N N 32
5CM "HO3'" H N N 33
5CM "H5'" H N N 34
5CM "H5''" H N N 35
5CM HOP2 H N N 36
5CM HOP3 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
HOH O O N N 109
HOH H1 H N N 110
HOH H2 H N N 111
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5CM N1 C2 sing N N 1
5CM N1 C6 sing N N 2
5CM N1 "C1'" sing N N 3
5CM C2 N3 sing N N 4
5CM C2 O2 doub N N 5
5CM N3 C4 doub N N 6
5CM C4 C5 sing N N 7
5CM C4 N4 sing N N 8
5CM C5 C5A sing N N 9
5CM C5 C6 doub N N 10
5CM C5A H5A1 sing N N 11
5CM C5A H5A2 sing N N 12
5CM C5A H5A3 sing N N 13
5CM C6 H6 sing N N 14
5CM N4 HN41 sing N N 15
5CM N4 HN42 sing N N 16
5CM "C1'" "C2'" sing N N 17
5CM "C1'" "O4'" sing N N 18
5CM "C1'" "H1'" sing N N 19
5CM "C2'" "C3'" sing N N 20
5CM "C2'" "H2'" sing N N 21
5CM "C2'" "H2''" sing N N 22
5CM "C3'" "C4'" sing N N 23
5CM "C3'" "O3'" sing N N 24
5CM "C3'" "H3'" sing N N 25
5CM "C4'" "O4'" sing N N 26
5CM "C4'" "C5'" sing N N 27
5CM "C4'" "H4'" sing N N 28
5CM "O3'" "HO3'" sing N N 29
5CM "C5'" "O5'" sing N N 30
5CM "C5'" "H5'" sing N N 31
5CM "C5'" "H5''" sing N N 32
5CM "O5'" P sing N N 33
5CM P OP1 doub N N 34
5CM P OP2 sing N N 35
5CM P OP3 sing N N 36
5CM OP2 HOP2 sing N N 37
5CM OP3 HOP3 sing N N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
HOH O H1 sing N N 113
HOH O H2 sing N N 114
#
_ndb_struct_conf_na.entry_id 1R3Z
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 A DC 8 7_555 -0.310 -0.147 -0.143 -7.232 -6.785 -1.936 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1
1 A 5CM 2 1_555 A DG 7 7_555 0.281 -0.184 -0.069 4.987 -13.021 2.458 2 A_5CM2:DG7_A A 2 ? A 7 ? 19 1
1 A DG 3 1_555 A DC 6 7_555 -0.219 -0.164 0.007 -4.715 -13.738 1.153 3 A_DG3:DC6_A A 3 ? A 6 ? 19 1
1 A 5CM 4 1_555 A DG 5 7_555 0.180 -0.127 0.203 -4.702 -6.515 0.688 4 A_5CM4:DG5_A A 4 ? A 5 ? 19 1
1 A DG 5 1_555 A 5CM 4 7_555 -0.180 -0.127 0.203 4.702 -6.515 0.688 5 A_DG5:5CM4_A A 5 ? A 4 ? 19 1
1 A DC 6 1_555 A DG 3 7_555 0.219 -0.164 0.007 4.715 -13.738 1.153 6 A_DC6:DG3_A A 6 ? A 3 ? 19 1
1 A DG 7 1_555 A 5CM 2 7_555 -0.281 -0.184 -0.069 -4.987 -13.021 2.458 7 A_DG7:5CM2_A A 7 ? A 2 ? 19 1
1 A DC 8 1_555 A DG 1 7_555 0.310 -0.147 -0.143 7.232 -6.785 -1.936 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 A DC 8 7_555 A 5CM 2 1_555 A DG 7 7_555 0.426 -1.168 3.104 0.235 6.212 34.822 -2.766 -0.669 2.863 10.279
-0.388 35.355 1 AA_DG15CM2:DG7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ?
1 A 5CM 2 1_555 A DG 7 7_555 A DG 3 1_555 A DC 6 7_555 0.018 -1.635 3.517 -0.094 10.886 28.812 -5.188 -0.052 2.733 20.957
0.180 30.760 2 AA_5CM2DG3:DC6DG7_AA A 2 ? A 7 ? A 3 ? A 6 ?
1 A DG 3 1_555 A DC 6 7_555 A 5CM 4 1_555 A DG 5 7_555 0.158 -1.478 3.357 -0.235 1.430 38.109 -2.446 -0.271 3.301 2.189
0.359 38.135 3 AA_DG35CM4:DG5DC6_AA A 3 ? A 6 ? A 4 ? A 5 ?
1 A 5CM 4 1_555 A DG 5 7_555 A DG 5 1_555 A 5CM 4 7_555 0.000 -1.944 3.091 0.000 5.293 21.535 -6.810 0.000 2.545 13.896
0.000 22.168 4 AA_5CM4DG5:5CM4DG5_AA A 4 ? A 5 ? A 5 ? A 4 ?
1 A DG 5 1_555 A 5CM 4 7_555 A DC 6 1_555 A DG 3 7_555 -0.158 -1.478 3.357 0.235 1.430 38.109 -2.446 0.271 3.301 2.189
-0.359 38.135 5 AA_DG5DC6:DG35CM4_AA A 5 ? A 4 ? A 6 ? A 3 ?
1 A DC 6 1_555 A DG 3 7_555 A DG 7 1_555 A 5CM 2 7_555 -0.018 -1.635 3.517 0.094 10.886 28.812 -5.188 0.052 2.733 20.957
-0.180 30.760 6 AA_DC6DG7:5CM2DG3_AA A 6 ? A 3 ? A 7 ? A 2 ?
1 A DG 7 1_555 A 5CM 2 7_555 A DC 8 1_555 A DG 1 7_555 -0.426 -1.168 3.104 -0.235 6.212 34.822 -2.766 0.669 2.863 10.279
0.388 35.355 7 AA_DG7DC8:DG15CM2_AA A 7 ? A 2 ? A 8 ? A 1 ?
#
_atom_sites.entry_id 1R3Z
_atom_sites.fract_transf_matrix[1][1] 0.023272
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.023272
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.040112
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? 28.811 19.388 -5.346 1.00 28.84 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? 28.721 17.982 -5.073 1.00 28.56 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? 29.893 17.340 -4.353 1.00 26.97 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? 31.037 17.389 -5.224 1.00 25.23 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? 30.337 18.053 -3.115 1.00 27.46 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? 29.659 17.597 -1.968 1.00 30.48 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? 31.834 17.769 -3.063 1.00 26.97 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? 32.239 17.668 -4.489 1.00 24.67 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? 32.742 18.974 -4.922 1.00 24.65 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? 32.095 19.886 -5.723 1.00 22.69 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? 32.840 20.968 -5.981 1.00 23.51 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? 34.022 20.738 -5.272 1.00 22.92 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? 35.223 21.527 -5.180 1.00 22.22 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? 35.436 22.597 -5.715 1.00 23.81 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? 36.220 20.892 -4.406 1.00 23.46 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? 36.054 19.687 -3.808 1.00 23.61 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? 37.094 19.207 -3.074 1.00 24.45 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? 34.932 18.962 -3.885 1.00 24.65 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? 33.982 19.527 -4.620 1.00 23.32 ? 1 DG A C4 1
HETATM 20 N N1 . 5CM A 1 2 ? 34.076 20.857 -0.789 1.00 27.25 ? 2 5CM A N1 1
HETATM 21 C C2 . 5CM A 1 2 ? 35.133 21.754 -1.081 1.00 27.08 ? 2 5CM A C2 1
HETATM 22 N N3 . 5CM A 1 2 ? 34.896 22.784 -1.931 1.00 23.92 ? 2 5CM A N3 1
HETATM 23 C C4 . 5CM A 1 2 ? 33.692 22.964 -2.459 1.00 23.79 ? 2 5CM A C4 1
HETATM 24 C C5 . 5CM A 1 2 ? 32.610 22.064 -2.185 1.00 25.02 ? 2 5CM A C5 1
HETATM 25 C C5A . 5CM A 1 2 ? 31.275 22.301 -2.821 1.00 25.37 ? 2 5CM A C5A 1
HETATM 26 C C6 . 5CM A 1 2 ? 32.849 21.056 -1.341 1.00 25.67 ? 2 5CM A C6 1
HETATM 27 O O2 . 5CM A 1 2 ? 36.255 21.539 -0.535 1.00 26.72 ? 2 5CM A O2 1
HETATM 28 N N4 . 5CM A 1 2 ? 33.483 24.013 -3.251 1.00 23.75 ? 2 5CM A N4 1
HETATM 29 C "C1'" . 5CM A 1 2 ? 34.352 19.721 0.109 1.00 28.41 ? 2 5CM A "C1'" 1
HETATM 30 C "C2'" . 5CM A 1 2 ? 34.160 20.139 1.557 1.00 29.46 ? 2 5CM A "C2'" 1
HETATM 31 C "C3'" . 5CM A 1 2 ? 32.726 19.761 1.836 1.00 30.20 ? 2 5CM A "C3'" 1
HETATM 32 C "C4'" . 5CM A 1 2 ? 32.627 18.450 1.072 1.00 29.61 ? 2 5CM A "C4'" 1
HETATM 33 O "O4'" . 5CM A 1 2 ? 33.355 18.708 -0.153 1.00 29.07 ? 2 5CM A "O4'" 1
HETATM 34 O "O3'" . 5CM A 1 2 ? 32.634 19.547 3.210 1.00 34.53 ? 2 5CM A "O3'" 1
HETATM 35 C "C5'" . 5CM A 1 2 ? 31.237 18.027 0.719 1.00 29.98 ? 2 5CM A "C5'" 1
HETATM 36 O "O5'" . 5CM A 1 2 ? 30.570 19.005 -0.020 1.00 29.99 ? 2 5CM A "O5'" 1
HETATM 37 P P . 5CM A 1 2 ? 29.236 18.650 -0.803 1.00 31.35 ? 2 5CM A P 1
HETATM 38 O OP1 . 5CM A 1 2 ? 28.466 17.872 0.187 1.00 34.44 ? 2 5CM A OP1 1
HETATM 39 O OP2 . 5CM A 1 2 ? 28.696 19.898 -1.405 1.00 30.10 ? 2 5CM A OP2 1
ATOM 40 P P . DG A 1 3 ? 32.080 20.753 4.136 1.00 37.16 ? 3 DG A P 1
ATOM 41 O OP1 . DG A 1 3 ? 31.820 20.065 5.428 1.00 38.26 ? 3 DG A OP1 1
ATOM 42 O OP2 . DG A 1 3 ? 31.024 21.527 3.473 1.00 36.93 ? 3 DG A OP2 1
ATOM 43 O "O5'" . DG A 1 3 ? 33.294 21.763 4.203 1.00 35.46 ? 3 DG A "O5'" 1
ATOM 44 C "C5'" . DG A 1 3 ? 34.317 21.544 5.098 1.00 35.36 ? 3 DG A "C5'" 1
ATOM 45 C "C4'" . DG A 1 3 ? 35.496 22.435 4.810 1.00 33.87 ? 3 DG A "C4'" 1
ATOM 46 O "O4'" . DG A 1 3 ? 35.649 22.445 3.390 1.00 32.82 ? 3 DG A "O4'" 1
ATOM 47 C "C3'" . DG A 1 3 ? 35.273 23.900 5.138 1.00 34.32 ? 3 DG A "C3'" 1
ATOM 48 O "O3'" . DG A 1 3 ? 35.627 24.194 6.478 1.00 35.47 ? 3 DG A "O3'" 1
ATOM 49 C "C2'" . DG A 1 3 ? 36.300 24.572 4.249 1.00 31.00 ? 3 DG A "C2'" 1
ATOM 50 C "C1'" . DG A 1 3 ? 36.326 23.676 3.006 1.00 30.77 ? 3 DG A "C1'" 1
ATOM 51 N N9 . DG A 1 3 ? 35.464 24.361 2.046 1.00 26.72 ? 3 DG A N9 1
ATOM 52 C C8 . DG A 1 3 ? 34.204 24.025 1.678 1.00 25.11 ? 3 DG A C8 1
ATOM 53 N N7 . DG A 1 3 ? 33.735 24.781 0.717 1.00 24.78 ? 3 DG A N7 1
ATOM 54 C C5 . DG A 1 3 ? 34.741 25.677 0.463 1.00 22.49 ? 3 DG A C5 1
ATOM 55 C C6 . DG A 1 3 ? 34.763 26.745 -0.431 1.00 21.31 ? 3 DG A C6 1
ATOM 56 O O6 . DG A 1 3 ? 33.931 27.068 -1.206 1.00 22.13 ? 3 DG A O6 1
ATOM 57 N N1 . DG A 1 3 ? 35.915 27.491 -0.309 1.00 19.60 ? 3 DG A N1 1
ATOM 58 C C2 . DG A 1 3 ? 36.921 27.234 0.601 1.00 21.55 ? 3 DG A C2 1
ATOM 59 N N2 . DG A 1 3 ? 37.956 28.093 0.609 1.00 21.17 ? 3 DG A N2 1
ATOM 60 N N3 . DG A 1 3 ? 36.924 26.185 1.444 1.00 23.10 ? 3 DG A N3 1
ATOM 61 C C4 . DG A 1 3 ? 35.800 25.469 1.310 1.00 25.53 ? 3 DG A C4 1
HETATM 62 N N1 . 5CM A 1 4 ? 35.777 29.126 3.483 1.00 24.09 ? 4 5CM A N1 1
HETATM 63 C C2 . 5CM A 1 4 ? 35.508 30.002 2.451 1.00 21.62 ? 4 5CM A C2 1
HETATM 64 N N3 . 5CM A 1 4 ? 34.362 29.852 1.696 1.00 21.64 ? 4 5CM A N3 1
HETATM 65 C C4 . 5CM A 1 4 ? 33.503 28.887 1.999 1.00 20.13 ? 4 5CM A C4 1
HETATM 66 C C5 . 5CM A 1 4 ? 33.757 27.979 3.074 1.00 24.07 ? 4 5CM A C5 1
HETATM 67 C C5A . 5CM A 1 4 ? 32.774 26.894 3.385 1.00 24.64 ? 4 5CM A C5A 1
HETATM 68 C C6 . 5CM A 1 4 ? 34.902 28.138 3.782 1.00 22.25 ? 4 5CM A C6 1
HETATM 69 O O2 . 5CM A 1 4 ? 36.321 30.891 2.259 1.00 20.40 ? 4 5CM A O2 1
HETATM 70 N N4 . 5CM A 1 4 ? 32.331 28.796 1.256 1.00 21.06 ? 4 5CM A N4 1
HETATM 71 C "C1'" . 5CM A 1 4 ? 37.056 29.317 4.215 1.00 26.59 ? 4 5CM A "C1'" 1
HETATM 72 C "C2'" . 5CM A 1 4 ? 36.792 30.272 5.397 1.00 26.39 ? 4 5CM A "C2'" 1
HETATM 73 C "C3'" . 5CM A 1 4 ? 36.595 29.350 6.577 1.00 28.12 ? 4 5CM A "C3'" 1
HETATM 74 C "C4'" . 5CM A 1 4 ? 37.511 28.185 6.243 1.00 28.92 ? 4 5CM A "C4'" 1
HETATM 75 O "O4'" . 5CM A 1 4 ? 37.433 28.063 4.797 1.00 26.91 ? 4 5CM A "O4'" 1
HETATM 76 O "O3'" . 5CM A 1 4 ? 37.033 30.001 7.781 1.00 29.08 ? 4 5CM A "O3'" 1
HETATM 77 C "C5'" . 5CM A 1 4 ? 37.023 26.917 6.893 1.00 30.16 ? 4 5CM A "C5'" 1
HETATM 78 O "O5'" . 5CM A 1 4 ? 35.664 26.691 6.607 1.00 32.98 ? 4 5CM A "O5'" 1
HETATM 79 P P . 5CM A 1 4 ? 34.935 25.440 7.234 1.00 35.63 ? 4 5CM A P 1
HETATM 80 O OP1 . 5CM A 1 4 ? 35.503 25.294 8.633 1.00 38.19 ? 4 5CM A OP1 1
HETATM 81 O OP2 . 5CM A 1 4 ? 33.467 25.687 7.081 1.00 34.99 ? 4 5CM A OP2 1
ATOM 82 P P . DG A 1 5 ? 36.052 31.061 8.497 1.00 29.81 ? 5 DG A P 1
ATOM 83 O OP1 . DG A 1 5 ? 36.649 31.231 9.799 1.00 33.04 ? 5 DG A OP1 1
ATOM 84 O OP2 . DG A 1 5 ? 34.667 30.644 8.382 1.00 31.10 ? 5 DG A OP2 1
ATOM 85 O "O5'" . DG A 1 5 ? 36.340 32.320 7.625 1.00 27.53 ? 5 DG A "O5'" 1
ATOM 86 C "C5'" . DG A 1 5 ? 35.346 33.295 7.410 1.00 25.99 ? 5 DG A "C5'" 1
ATOM 87 C "C4'" . DG A 1 5 ? 35.849 34.219 6.350 1.00 24.03 ? 5 DG A "C4'" 1
ATOM 88 O "O4'" . DG A 1 5 ? 35.807 33.383 5.153 1.00 22.54 ? 5 DG A "O4'" 1
ATOM 89 C "C3'" . DG A 1 5 ? 34.834 35.311 6.068 1.00 22.95 ? 5 DG A "C3'" 1
ATOM 90 O "O3'" . DG A 1 5 ? 35.207 36.466 6.800 1.00 26.01 ? 5 DG A "O3'" 1
ATOM 91 C "C2'" . DG A 1 5 ? 34.979 35.529 4.561 1.00 22.51 ? 5 DG A "C2'" 1
ATOM 92 C "C1'" . DG A 1 5 ? 35.285 34.126 4.049 1.00 19.99 ? 5 DG A "C1'" 1
ATOM 93 N N9 . DG A 1 5 ? 34.044 33.489 3.640 1.00 18.30 ? 5 DG A N9 1
ATOM 94 C C8 . DG A 1 5 ? 33.412 32.425 4.219 1.00 19.46 ? 5 DG A C8 1
ATOM 95 N N7 . DG A 1 5 ? 32.389 31.991 3.540 1.00 19.19 ? 5 DG A N7 1
ATOM 96 C C5 . DG A 1 5 ? 32.312 32.857 2.445 1.00 18.94 ? 5 DG A C5 1
ATOM 97 C C6 . DG A 1 5 ? 31.369 32.937 1.365 1.00 19.91 ? 5 DG A C6 1
ATOM 98 O O6 . DG A 1 5 ? 30.427 32.177 1.096 1.00 20.72 ? 5 DG A O6 1
ATOM 99 N N1 . DG A 1 5 ? 31.615 34.034 0.547 1.00 18.23 ? 5 DG A N1 1
ATOM 100 C C2 . DG A 1 5 ? 32.672 34.910 0.712 1.00 19.92 ? 5 DG A C2 1
ATOM 101 N N2 . DG A 1 5 ? 32.829 35.904 -0.226 1.00 20.27 ? 5 DG A N2 1
ATOM 102 N N3 . DG A 1 5 ? 33.548 34.829 1.708 1.00 20.71 ? 5 DG A N3 1
ATOM 103 C C4 . DG A 1 5 ? 33.304 33.803 2.510 1.00 18.40 ? 5 DG A C4 1
ATOM 104 P P . DC A 1 6 ? 34.045 37.399 7.381 1.00 27.52 ? 6 DC A P 1
ATOM 105 O OP1 . DC A 1 6 ? 34.803 38.320 8.280 1.00 31.62 ? 6 DC A OP1 1
ATOM 106 O OP2 . DC A 1 6 ? 32.892 36.600 7.845 1.00 27.13 ? 6 DC A OP2 1
ATOM 107 O "O5'" . DC A 1 6 ? 33.586 38.201 6.120 1.00 26.43 ? 6 DC A "O5'" 1
ATOM 108 C "C5'" . DC A 1 6 ? 34.424 39.091 5.507 1.00 26.90 ? 6 DC A "C5'" 1
ATOM 109 C "C4'" . DC A 1 6 ? 33.774 39.620 4.250 1.00 25.73 ? 6 DC A "C4'" 1
ATOM 110 O "O4'" . DC A 1 6 ? 33.600 38.518 3.298 1.00 24.77 ? 6 DC A "O4'" 1
ATOM 111 C "C3'" . DC A 1 6 ? 32.341 40.163 4.398 1.00 26.76 ? 6 DC A "C3'" 1
ATOM 112 O "O3'" . DC A 1 6 ? 32.270 41.550 4.776 1.00 31.80 ? 6 DC A "O3'" 1
ATOM 113 C "C2'" . DC A 1 6 ? 31.805 40.018 2.993 1.00 23.06 ? 6 DC A "C2'" 1
ATOM 114 C "C1'" . DC A 1 6 ? 32.425 38.726 2.504 1.00 23.17 ? 6 DC A "C1'" 1
ATOM 115 N N1 . DC A 1 6 ? 31.506 37.648 2.790 1.00 21.95 ? 6 DC A N1 1
ATOM 116 C C2 . DC A 1 6 ? 30.492 37.361 1.926 1.00 20.80 ? 6 DC A C2 1
ATOM 117 O O2 . DC A 1 6 ? 30.330 38.101 0.943 1.00 24.35 ? 6 DC A O2 1
ATOM 118 N N3 . DC A 1 6 ? 29.651 36.282 2.140 1.00 19.62 ? 6 DC A N3 1
ATOM 119 C C4 . DC A 1 6 ? 29.829 35.538 3.199 1.00 20.57 ? 6 DC A C4 1
ATOM 120 N N4 . DC A 1 6 ? 29.037 34.452 3.327 1.00 19.66 ? 6 DC A N4 1
ATOM 121 C C5 . DC A 1 6 ? 30.840 35.837 4.175 1.00 19.75 ? 6 DC A C5 1
ATOM 122 C C6 . DC A 1 6 ? 31.668 36.897 3.927 1.00 21.58 ? 6 DC A C6 1
ATOM 123 P P . DG A 1 7 ? 31.018 42.022 5.658 1.00 31.26 ? 7 DG A P 1
ATOM 124 O OP1 . DG A 1 7 ? 31.455 43.351 6.157 1.00 34.69 ? 7 DG A OP1 1
ATOM 125 O OP2 . DG A 1 7 ? 30.402 41.039 6.603 1.00 31.03 ? 7 DG A OP2 1
ATOM 126 O "O5'" . DG A 1 7 ? 29.858 42.158 4.550 1.00 29.08 ? 7 DG A "O5'" 1
ATOM 127 C "C5'" . DG A 1 7 ? 29.996 43.055 3.500 1.00 26.86 ? 7 DG A "C5'" 1
ATOM 128 C "C4'" . DG A 1 7 ? 28.834 42.907 2.542 1.00 25.03 ? 7 DG A "C4'" 1
ATOM 129 O "O4'" . DG A 1 7 ? 28.893 41.558 2.077 1.00 23.65 ? 7 DG A "O4'" 1
ATOM 130 C "C3'" . DG A 1 7 ? 27.427 43.037 3.133 1.00 26.28 ? 7 DG A "C3'" 1
ATOM 131 O "O3'" . DG A 1 7 ? 27.005 44.388 3.044 1.00 30.10 ? 7 DG A "O3'" 1
ATOM 132 C "C2'" . DG A 1 7 ? 26.583 42.163 2.196 1.00 24.57 ? 7 DG A "C2'" 1
ATOM 133 C "C1'" . DG A 1 7 ? 27.597 41.110 1.703 1.00 22.50 ? 7 DG A "C1'" 1
ATOM 134 N N9 . DG A 1 7 ? 27.333 39.925 2.475 1.00 19.04 ? 7 DG A N9 1
ATOM 135 C C8 . DG A 1 7 ? 28.003 39.440 3.508 1.00 17.90 ? 7 DG A C8 1
ATOM 136 N N7 . DG A 1 7 ? 27.512 38.297 3.968 1.00 16.99 ? 7 DG A N7 1
ATOM 137 C C5 . DG A 1 7 ? 26.450 38.020 3.142 1.00 17.95 ? 7 DG A C5 1
ATOM 138 C C6 . DG A 1 7 ? 25.601 36.907 3.112 1.00 20.10 ? 7 DG A C6 1
ATOM 139 O O6 . DG A 1 7 ? 25.633 35.892 3.820 1.00 21.56 ? 7 DG A O6 1
ATOM 140 N N1 . DG A 1 7 ? 24.655 37.013 2.154 1.00 21.61 ? 7 DG A N1 1
ATOM 141 C C2 . DG A 1 7 ? 24.528 38.094 1.330 1.00 22.91 ? 7 DG A C2 1
ATOM 142 N N2 . DG A 1 7 ? 23.515 38.063 0.482 1.00 24.88 ? 7 DG A N2 1
ATOM 143 N N3 . DG A 1 7 ? 25.362 39.166 1.337 1.00 20.65 ? 7 DG A N3 1
ATOM 144 C C4 . DG A 1 7 ? 26.273 39.034 2.244 1.00 19.38 ? 7 DG A C4 1
ATOM 145 P P . DC A 1 8 ? 25.912 44.901 4.064 1.00 31.65 ? 8 DC A P 1
ATOM 146 O OP1 . DC A 1 8 ? 26.036 46.369 3.751 1.00 34.80 ? 8 DC A OP1 1
ATOM 147 O OP2 . DC A 1 8 ? 26.262 44.392 5.368 1.00 34.60 ? 8 DC A OP2 1
ATOM 148 O "O5'" . DC A 1 8 ? 24.535 44.291 3.643 1.00 32.29 ? 8 DC A "O5'" 1
ATOM 149 C "C5'" . DC A 1 8 ? 24.053 44.674 2.341 1.00 35.60 ? 8 DC A "C5'" 1
ATOM 150 C "C4'" . DC A 1 8 ? 22.719 44.063 1.995 1.00 35.48 ? 8 DC A "C4'" 1
ATOM 151 O "O4'" . DC A 1 8 ? 22.897 42.643 1.978 1.00 35.78 ? 8 DC A "O4'" 1
ATOM 152 C "C3'" . DC A 1 8 ? 21.576 44.373 2.961 1.00 37.50 ? 8 DC A "C3'" 1
ATOM 153 O "O3'" . DC A 1 8 ? 20.489 44.660 2.104 1.00 42.54 ? 8 DC A "O3'" 1
ATOM 154 C "C2'" . DC A 1 8 ? 21.400 43.088 3.732 1.00 37.11 ? 8 DC A "C2'" 1
ATOM 155 C "C1'" . DC A 1 8 ? 21.882 42.018 2.749 1.00 34.63 ? 8 DC A "C1'" 1
ATOM 156 N N1 . DC A 1 8 ? 22.510 40.915 3.523 1.00 29.53 ? 8 DC A N1 1
ATOM 157 C C2 . DC A 1 8 ? 21.904 39.619 3.499 1.00 28.21 ? 8 DC A C2 1
ATOM 158 O O2 . DC A 1 8 ? 20.919 39.427 2.763 1.00 27.49 ? 8 DC A O2 1
ATOM 159 N N3 . DC A 1 8 ? 22.443 38.632 4.280 1.00 23.37 ? 8 DC A N3 1
ATOM 160 C C4 . DC A 1 8 ? 23.523 38.908 5.042 1.00 22.89 ? 8 DC A C4 1
ATOM 161 N N4 . DC A 1 8 ? 24.023 37.943 5.830 1.00 22.70 ? 8 DC A N4 1
ATOM 162 C C5 . DC A 1 8 ? 24.172 40.199 5.033 1.00 23.82 ? 8 DC A C5 1
ATOM 163 C C6 . DC A 1 8 ? 23.615 41.151 4.270 1.00 26.74 ? 8 DC A C6 1
HETATM 164 O O . HOH B 2 . ? 24.270 41.190 -0.218 1.00 42.65 ? 101 HOH A O 1
HETATM 165 O O . HOH B 2 . ? 35.769 36.568 1.306 1.00 25.00 ? 102 HOH A O 1
HETATM 166 O O . HOH B 2 . ? 36.978 38.572 2.502 1.00 35.98 ? 103 HOH A O 1
HETATM 167 O O . HOH B 2 . ? 29.186 30.292 1.925 1.00 46.31 ? 105 HOH A O 1
HETATM 168 O O . HOH B 2 . ? 34.218 24.618 -7.038 1.00 39.14 ? 106 HOH A O 1
HETATM 169 O O . HOH B 2 . ? 31.690 23.013 -7.507 1.00 46.97 ? 107 HOH A O 1
HETATM 170 O O . HOH B 2 . ? 31.478 26.664 -2.008 1.00 45.13 ? 108 HOH A O 1
HETATM 171 O O . HOH B 2 . ? 31.041 24.716 0.016 1.00 40.00 ? 109 HOH A O 1
HETATM 172 O O . HOH B 2 . ? 26.809 34.937 5.927 1.00 42.66 ? 110 HOH A O 1
HETATM 173 O O . HOH B 2 . ? 26.243 38.542 7.593 1.00 32.46 ? 111 HOH A O 1
HETATM 174 O O . HOH B 2 . ? 29.990 22.288 0.968 1.00 53.55 ? 112 HOH A O 1
HETATM 175 O O . HOH B 2 . ? 38.073 38.434 5.031 1.00 39.14 ? 113 HOH A O 1
HETATM 176 O O . HOH B 2 . ? 27.625 20.783 -3.498 1.00 44.77 ? 114 HOH A O 1
HETATM 177 O O . HOH B 2 . ? 37.716 19.565 0.653 1.00 56.75 ? 115 HOH A O 1
HETATM 178 O O . HOH B 2 . ? 30.059 38.247 7.055 1.00 45.46 ? 116 HOH A O 1
HETATM 179 O O . HOH B 2 . ? 31.619 34.301 7.119 1.00 51.82 ? 117 HOH A O 1
HETATM 180 O O . HOH B 2 . ? 28.222 36.958 6.232 1.00 34.88 ? 118 HOH A O 1
HETATM 181 O O . HOH B 2 . ? 25.909 42.511 7.225 1.00 51.23 ? 119 HOH A O 1
HETATM 182 O O . HOH B 2 . ? 38.786 29.338 10.297 1.00 62.18 ? 120 HOH A O 1
HETATM 183 O O . HOH B 2 . ? 31.318 24.731 6.406 1.00 54.80 ? 121 HOH A O 1
HETATM 184 O O . HOH B 2 . ? 28.712 19.802 -7.930 1.00 51.79 ? 122 HOH A O 1
HETATM 185 O O . HOH B 2 . ? 32.980 28.434 6.772 1.00 51.60 ? 123 HOH A O 1
HETATM 186 O O . HOH B 2 . ? 37.147 22.714 9.335 1.00 64.07 ? 124 HOH A O 1
HETATM 187 O O . HOH B 2 . ? 29.902 26.813 1.047 1.00 46.44 ? 125 HOH A O 1
HETATM 188 O O . HOH B 2 . ? 39.436 39.549 1.212 1.00 61.31 ? 126 HOH A O 1
#