data_1NT8
#
_entry.id 1NT8
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.386
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1NT8 pdb_00001nt8 10.2210/pdb1nt8/pdb
NDB UD0024 ? ?
RCSB RCSB018180 ? ?
WWPDB D_1000018180 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2003-02-11
2 'Structure model' 1 1 2008-04-29
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-14
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' diffrn_source
5 4 'Structure model' pdbx_struct_conn_angle
6 4 'Structure model' struct_conn
7 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
10 4 'Structure model' '_pdbx_struct_conn_angle.value'
11 4 'Structure model' '_struct_conn.pdbx_dist_value'
12 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
13 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
14 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
15 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
16 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
17 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1NT8
_pdbx_database_status.recvd_initial_deposition_date 2003-01-29
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
NDB UD0023 'Holliday junction formed by the sequence TCGGTACCGA in the presence of one calcium ion' unspecified
NDB UD0018 'Holliday junction formed by TCGGTACCGA in presence of Na and Ca ions' unspecified
NDB UD0021 'Holliday junction formed by TCGGTACCGA with a spine of Sr ions' unspecified
NDB UD0015 'Holliday junction formed by CCGGTACCGG in the more symmetrical form' unspecified
NDB UD0019 'Holliday junction formed by CCGGTACmCGG with a methylated base' unspecified
NDB UD0008 'Holliay junction formed by CCGGTACGG in presnece of a Na ion' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Cardin, C.J.' 1
'Gale, B.C.' 2
'Thorpe, J.H.' 3
'Texieira, S.C.M.' 4
'Gan, Y.' 5
'Moraes, M.I.A.A.' 6
'Brogden, A.L.' 7
#
_citation.id primary
_citation.title
'Structural Analysis of two Holliday Junctions formed by the sequences TCGGTACCGA and CCGGTACCGG'
_citation.journal_abbrev 'To be Published'
_citation.journal_volume ?
_citation.page_first ?
_citation.page_last ?
_citation.year ?
_citation.journal_id_ASTM ?
_citation.country ?
_citation.journal_id_ISSN ?
_citation.journal_id_CSD 0353
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed ?
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Cardin, C.J.' 1 ?
primary 'Gale, B.C.' 2 ?
primary 'Thorpe, J.H.' 3 ?
primary 'Texieira, S.C.M.' 4 ?
primary 'Gan, Y.' 5 ?
primary 'Moraes, M.I.A.A.' 6 ?
primary 'Brogden, A.L.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-d(CpCpGpGpTpApCpCpGpG)-3'" 3045.992 2 ? ? ? ?
2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ?
3 water nat water 18.015 37 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DT)(DA)(DC)(DC)(DG)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CCGGTACCGG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'CALCIUM ION' CA
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DT n
1 6 DA n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'Chemically synthesized'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DC 2 2 2 DC C A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DT 5 5 5 DT T A . n
A 1 6 DA 6 6 6 DA A A . n
A 1 7 DC 7 7 7 DC C A . n
A 1 8 DC 8 8 8 DC C A . n
A 1 9 DG 9 9 9 DG G A . n
A 1 10 DG 10 10 10 DG G A . n
B 1 1 DC 1 11 11 DC C B . n
B 1 2 DC 2 12 12 DC C B . n
B 1 3 DG 3 13 13 DG G B . n
B 1 4 DG 4 14 14 DG G B . n
B 1 5 DT 5 15 15 DT T B . n
B 1 6 DA 6 16 16 DA A B . n
B 1 7 DC 7 17 17 DC C B . n
B 1 8 DC 8 18 18 DC C B . n
B 1 9 DG 9 19 19 DG G B . n
B 1 10 DG 10 20 20 DG G B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA 1 102 2 CA CA A .
D 2 CA 1 101 1 CA CA B .
E 3 HOH 1 103 5 HOH HOH A .
E 3 HOH 2 104 8 HOH HOH A .
E 3 HOH 3 105 9 HOH HOH A .
E 3 HOH 4 106 11 HOH HOH A .
E 3 HOH 5 107 12 HOH HOH A .
E 3 HOH 6 108 13 HOH HOH A .
E 3 HOH 7 109 15 HOH HOH A .
E 3 HOH 8 110 16 HOH HOH A .
E 3 HOH 9 111 17 HOH HOH A .
E 3 HOH 10 112 29 HOH HOH A .
E 3 HOH 11 113 45 HOH HOH A .
E 3 HOH 12 114 53 HOH HOH A .
E 3 HOH 13 115 54 HOH HOH A .
E 3 HOH 14 116 55 HOH HOH A .
E 3 HOH 15 117 57 HOH HOH A .
E 3 HOH 16 118 59 HOH HOH A .
F 3 HOH 1 102 1 HOH HOH B .
F 3 HOH 2 103 4 HOH HOH B .
F 3 HOH 3 104 6 HOH HOH B .
F 3 HOH 4 105 7 HOH HOH B .
F 3 HOH 5 106 20 HOH HOH B .
F 3 HOH 6 107 22 HOH HOH B .
F 3 HOH 7 108 23 HOH HOH B .
F 3 HOH 8 109 26 HOH HOH B .
F 3 HOH 9 110 28 HOH HOH B .
F 3 HOH 10 111 30 HOH HOH B .
F 3 HOH 11 112 34 HOH HOH B .
F 3 HOH 12 113 35 HOH HOH B .
F 3 HOH 13 114 38 HOH HOH B .
F 3 HOH 14 115 41 HOH HOH B .
F 3 HOH 15 116 42 HOH HOH B .
F 3 HOH 16 117 49 HOH HOH B .
F 3 HOH 17 118 52 HOH HOH B .
F 3 HOH 18 119 56 HOH HOH B .
F 3 HOH 19 120 61 HOH HOH B .
F 3 HOH 20 121 62 HOH HOH B .
F 3 HOH 21 122 63 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
REFMAC refinement 5.1.24 ? 1
MOSFLM 'data reduction' . ? 2
CCP4 'data scaling' '(SCALA)' ? 3
XTALVIEW refinement . ? 4
#
_cell.entry_id 1NT8
_cell.length_a 65.949
_cell.length_b 23.756
_cell.length_c 37.204
_cell.angle_alpha 90.00
_cell.angle_beta 109.98
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1NT8
_symmetry.space_group_name_H-M 'C 1 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 5
#
_exptl.entry_id 1NT8
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.15
_exptl_crystal.density_percent_sol 42.70
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 290
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pdbx_details 'MPD, Calcium chloride, cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K'
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type MARRESEARCH
_diffrn_detector.pdbx_collection_date 2002-05-16
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.811
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11'
_diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG'
_diffrn_source.pdbx_synchrotron_beamline X11
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.811
#
_reflns.entry_id 1NT8
_reflns.observed_criterion_sigma_F 1.0
_reflns.observed_criterion_sigma_I 1.0
_reflns.d_resolution_high 1.91
_reflns.d_resolution_low 34.92
_reflns.number_all 6058
_reflns.number_obs 4276
_reflns.percent_possible_obs 97.6
_reflns.pdbx_Rmerge_I_obs 0.103
_reflns.pdbx_Rsym_value 0.106
_reflns.pdbx_netI_over_sigmaI 4.18
_reflns.B_iso_Wilson_estimate 34.53
_reflns.pdbx_redundancy 4.0
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.91
_reflns_shell.d_res_low 2.01
_reflns_shell.percent_possible_all 97.4
_reflns_shell.Rmerge_I_obs 0.849
_reflns_shell.pdbx_Rsym_value 0.849
_reflns_shell.meanI_over_sigI_obs 0.8
_reflns_shell.pdbx_redundancy 3.9
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 624
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1NT8
_refine.ls_number_reflns_obs 3539
_refine.ls_number_reflns_all 4940
_refine.pdbx_ls_sigma_I 1.0
_refine.pdbx_ls_sigma_F 1.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 34.92
_refine.ls_d_res_high 2.00
_refine.ls_percent_reflns_obs 97.37
_refine.ls_R_factor_obs 0.24834
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.24659
_refine.ls_R_factor_R_free 0.28262
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.5
_refine.ls_number_reflns_R_free 167
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.939
_refine.correlation_coeff_Fo_to_Fc_free 0.925
_refine.B_iso_mean 34.530
_refine.aniso_B[1][1] -1.19
_refine.aniso_B[2][2] 2.84
_refine.aniso_B[3][3] -2.17
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] -0.77
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'BABINET MODEL WITH MASK'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.253
_refine.pdbx_overall_ESU_R_Free 0.205
_refine.overall_SU_ML 0.136
_refine.overall_SU_B 4.868
_refine.ls_redundancy_reflns_obs ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 404
_refine_hist.pdbx_number_atoms_ligand 2
_refine_hist.number_atoms_solvent 37
_refine_hist.number_atoms_total 443
_refine_hist.d_res_high 2.00
_refine_hist.d_res_low 34.92
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.024 0.021 ? 452 'X-RAY DIFFRACTION' ?
r_bond_other_d 0.002 0.020 ? 186 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 3.768 3.000 ? 694 'X-RAY DIFFRACTION' ?
r_angle_other_deg 1.779 3.000 ? 472 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.117 0.200 ? 60 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.020 0.020 ? 210 'X-RAY DIFFRACTION' ?
r_gen_planes_other 0.000 0.020 ? 2 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.170 0.200 ? 51 'X-RAY DIFFRACTION' ?
r_nbd_other 0.227 0.200 ? 194 'X-RAY DIFFRACTION' ?
r_nbtor_other 0.117 0.200 ? 109 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.282 0.200 ? 22 'X-RAY DIFFRACTION' ?
r_metal_ion_refined 0.043 0.200 ? 3 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.204 0.200 ? 26 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other 0.378 0.200 ? 16 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.128 0.200 ? 10 'X-RAY DIFFRACTION' ?
r_scbond_it 3.613 3.000 ? 452 'X-RAY DIFFRACTION' ?
r_scangle_it 4.770 4.500 ? 694 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.000
_refine_ls_shell.d_res_low 2.052
_refine_ls_shell.number_reflns_R_work 248
_refine_ls_shell.R_factor_R_work 0.233
_refine_ls_shell.percent_reflns_obs ?
_refine_ls_shell.R_factor_R_free 0.207
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 9
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
#
_database_PDB_matrix.entry_id 1NT8
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1NT8
_struct.title
'Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 A'
_struct.pdbx_model_details
'The structure is the more symmetrical form of the Holliday Junction with two calcium ions present'
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1NT8
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'Holliday Junction, Calcium ion, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
F N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1NT8
_struct_ref.pdbx_db_accession 1NT8
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1NT8 A 1 ? 10 ? 1NT8 1 ? 10 ? 1 10
2 1 1NT8 B 1 ? 10 ? 1NT8 11 ? 20 ? 11 20
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details tetrameric
_pdbx_struct_assembly.oligomeric_count 4
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 102 A HOH 103 1_555 ? ? ? ? ? ? ? 3.017 ? ?
metalc2 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 102 A HOH 114 1_555 ? ? ? ? ? ? ? 2.604 ? ?
metalc3 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 102 A HOH 115 1_555 ? ? ? ? ? ? ? 2.474 ? ?
metalc4 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 102 A HOH 116 1_555 ? ? ? ? ? ? ? 2.408 ? ?
metalc5 metalc ? ? C CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 102 B HOH 103 1_555 ? ? ? ? ? ? ? 2.852 ? ?
metalc6 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 101 B HOH 102 1_555 ? ? ? ? ? ? ? 2.414 ? ?
metalc7 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 101 B HOH 104 1_555 ? ? ? ? ? ? ? 2.735 ? ?
metalc8 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 101 B HOH 105 1_555 ? ? ? ? ? ? ? 3.242 ? ?
metalc9 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 101 B HOH 110 1_555 ? ? ? ? ? ? ? 2.630 ? ?
metalc10 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 101 B HOH 118 1_555 ? ? ? ? ? ? ? 2.443 ? ?
metalc11 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? B CA 101 B HOH 119 1_555 ? ? ? ? ? ? ? 2.568 ? ?
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? E HOH . ? A HOH 103 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? E HOH . ? A HOH 114 ? 1_555 58.5 ?
2 O ? E HOH . ? A HOH 103 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? E HOH . ? A HOH 115 ? 1_555 82.4 ?
3 O ? E HOH . ? A HOH 114 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? E HOH . ? A HOH 115 ? 1_555 75.0 ?
4 O ? E HOH . ? A HOH 103 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? E HOH . ? A HOH 116 ? 1_555 83.4 ?
5 O ? E HOH . ? A HOH 114 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? E HOH . ? A HOH 116 ? 1_555 141.5 ?
6 O ? E HOH . ? A HOH 115 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? E HOH . ? A HOH 116 ? 1_555 96.5 ?
7 O ? E HOH . ? A HOH 103 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? F HOH . ? B HOH 103 ? 1_555 101.8 ?
8 O ? E HOH . ? A HOH 114 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? F HOH . ? B HOH 103 ? 1_555 111.0 ?
9 O ? E HOH . ? A HOH 115 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? F HOH . ? B HOH 103 ? 1_555 173.9 ?
10 O ? E HOH . ? A HOH 116 ? 1_555 CA ? C CA . ? A CA 102 ? 1_555 O ? F HOH . ? B HOH 103 ? 1_555 79.7 ?
11 O ? F HOH . ? B HOH 102 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 104 ? 1_555 131.6 ?
12 O ? F HOH . ? B HOH 102 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 105 ? 1_555 110.4 ?
13 O ? F HOH . ? B HOH 104 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 105 ? 1_555 113.9 ?
14 O ? F HOH . ? B HOH 102 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 110 ? 1_555 80.7 ?
15 O ? F HOH . ? B HOH 104 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 110 ? 1_555 140.6 ?
16 O ? F HOH . ? B HOH 105 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 110 ? 1_555 57.6 ?
17 O ? F HOH . ? B HOH 102 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 118 ? 1_555 54.7 ?
18 O ? F HOH . ? B HOH 104 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 118 ? 1_555 129.0 ?
19 O ? F HOH . ? B HOH 105 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 118 ? 1_555 68.3 ?
20 O ? F HOH . ? B HOH 110 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 118 ? 1_555 86.1 ?
21 O ? F HOH . ? B HOH 102 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 119 ? 1_555 58.0 ?
22 O ? F HOH . ? B HOH 104 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 119 ? 1_555 76.5 ?
23 O ? F HOH . ? B HOH 105 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 119 ? 1_555 136.6 ?
24 O ? F HOH . ? B HOH 110 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 119 ? 1_555 138.7 ?
25 O ? F HOH . ? B HOH 118 ? 1_555 CA ? D CA . ? B CA 101 ? 1_555 O ? F HOH . ? B HOH 119 ? 1_555 73.1 ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software B CA 101 ? 5 'BINDING SITE FOR RESIDUE CA B 101'
AC2 Software A CA 102 ? 5 'BINDING SITE FOR RESIDUE CA A 102'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 5 HOH F . ? HOH B 102 . ? 1_555 ?
2 AC1 5 HOH F . ? HOH B 104 . ? 1_555 ?
3 AC1 5 HOH F . ? HOH B 110 . ? 1_555 ?
4 AC1 5 HOH F . ? HOH B 118 . ? 1_555 ?
5 AC1 5 HOH F . ? HOH B 119 . ? 1_555 ?
6 AC2 5 HOH E . ? HOH A 103 . ? 1_555 ?
7 AC2 5 HOH E . ? HOH A 114 . ? 1_555 ?
8 AC2 5 HOH E . ? HOH A 115 . ? 1_555 ?
9 AC2 5 HOH E . ? HOH A 116 . ? 1_555 ?
10 AC2 5 HOH F . ? HOH B 103 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C2 A DC 2 ? ? N3 A DC 2 ? ? 1.304 1.353 -0.049 0.008 N
2 1 "O3'" A DT 5 ? ? "C3'" A DT 5 ? ? 1.357 1.419 -0.062 0.006 N
3 1 N3 A DA 6 ? ? C4 A DA 6 ? ? 1.397 1.344 0.053 0.006 N
4 1 N9 A DA 6 ? ? C4 A DA 6 ? ? 1.410 1.374 0.036 0.006 N
5 1 N3 A DG 10 ? ? C4 A DG 10 ? ? 1.393 1.350 0.043 0.007 N
6 1 "O3'" B DC 11 ? ? "C3'" B DC 11 ? ? 1.357 1.419 -0.062 0.006 N
7 1 "O3'" B DC 11 ? ? P B DC 12 ? ? 1.525 1.607 -0.082 0.012 Y
8 1 C4 B DC 12 ? ? N4 B DC 12 ? ? 1.263 1.335 -0.072 0.009 N
9 1 N1 B DG 13 ? ? C2 B DG 13 ? ? 1.421 1.373 0.048 0.008 N
10 1 "O3'" B DG 14 ? ? "C3'" B DG 14 ? ? 1.313 1.419 -0.106 0.006 N
11 1 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.348 1.305 0.043 0.006 N
12 1 "C1'" B DT 15 ? ? N1 B DT 15 ? ? 1.579 1.488 0.091 0.013 N
13 1 N1 B DT 15 ? ? C2 B DT 15 ? ? 1.454 1.376 0.078 0.008 N
14 1 "O3'" B DA 16 ? ? "C3'" B DA 16 ? ? 1.381 1.419 -0.038 0.006 N
15 1 C6 B DG 19 ? ? O6 B DG 19 ? ? 1.301 1.237 0.064 0.009 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.73 108.30 2.43 0.30 N
2 1 "O5'" A DC 2 ? ? P A DC 2 ? ? OP2 A DC 2 ? ? 100.02 105.70 -5.68 0.90 N
3 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 101.49 104.50 -3.01 0.40 N
4 1 "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? "C1'" A DC 2 ? ? 97.31 102.40 -5.09 0.80 N
5 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? "C2'" A DC 2 ? ? 99.18 105.90 -6.72 0.80 N
6 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 97.19 108.00 -10.81 0.70 N
7 1 C2 A DC 2 ? ? N3 A DC 2 ? ? C4 A DC 2 ? ? 125.31 119.90 5.41 0.50 N
8 1 "O4'" A DG 3 ? ? "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? 101.70 104.50 -2.80 0.40 N
9 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 103.49 108.00 -4.51 0.70 N
10 1 "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 101.13 104.50 -3.37 0.40 N
11 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 102.20 108.00 -5.80 0.70 N
12 1 C2 A DG 4 ? ? N3 A DG 4 ? ? C4 A DG 4 ? ? 107.34 111.90 -4.56 0.50 N
13 1 C4 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 114.91 110.80 4.11 0.40 N
14 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 109.46 106.40 3.06 0.40 N
15 1 N9 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 100.87 105.40 -4.53 0.40 N
16 1 C6 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 124.52 130.40 -5.88 0.60 N
17 1 N1 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 106.75 116.20 -9.45 0.90 N
18 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 128.80 119.90 8.90 0.70 N
19 1 "O5'" A DT 5 ? ? "C5'" A DT 5 ? ? "C4'" A DT 5 ? ? 103.62 109.40 -5.78 0.80 N
20 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 114.09 108.30 5.79 0.30 N
21 1 C4 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 123.82 119.00 4.82 0.60 N
22 1 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.13 122.90 -3.77 0.60 N
23 1 "O3'" A DT 5 ? ? P A DA 6 ? ? "O5'" A DA 6 ? ? 88.91 104.00 -15.09 1.90 Y
24 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.30 108.30 3.00 0.30 N
25 1 C6 A DA 6 ? ? N1 A DA 6 ? ? C2 A DA 6 ? ? 122.71 118.60 4.11 0.60 N
26 1 C4 A DA 6 ? ? C5 A DA 6 ? ? N7 A DA 6 ? ? 114.22 110.70 3.52 0.50 N
27 1 C5 A DA 6 ? ? N7 A DA 6 ? ? C8 A DA 6 ? ? 100.15 103.90 -3.75 0.50 N
28 1 N9 A DA 6 ? ? C4 A DA 6 ? ? C5 A DA 6 ? ? 102.10 105.80 -3.70 0.40 N
29 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 113.63 108.30 5.33 0.30 N
30 1 "C3'" A DC 7 ? ? "O3'" A DC 7 ? ? P A DC 8 ? ? 109.86 119.70 -9.84 1.20 Y
31 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? "C2'" A DC 8 ? ? 100.50 105.90 -5.40 0.80 N
32 1 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 124.59 119.90 4.69 0.70 N
33 1 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 114.76 119.90 -5.14 0.60 N
34 1 C5 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 134.12 128.60 5.52 0.60 N
35 1 "C3'" A DG 9 ? ? "O3'" A DG 9 ? ? P A DG 10 ? ? 129.98 119.70 10.28 1.20 Y
36 1 OP1 A DG 10 ? ? P A DG 10 ? ? OP2 A DG 10 ? ? 129.39 119.60 9.79 1.50 N
37 1 "C1'" B DC 11 ? ? "O4'" B DC 11 ? ? "C4'" B DC 11 ? ? 102.52 110.10 -7.58 1.00 N
38 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 101.22 108.00 -6.78 0.70 N
39 1 C6 B DC 11 ? ? N1 B DC 11 ? ? C2 B DC 11 ? ? 125.01 120.30 4.71 0.40 N
40 1 N3 B DC 11 ? ? C4 B DC 11 ? ? C5 B DC 11 ? ? 125.93 121.90 4.03 0.40 N
41 1 C5 B DC 11 ? ? C6 B DC 11 ? ? N1 B DC 11 ? ? 117.65 121.00 -3.35 0.50 N
42 1 N1 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 124.08 118.90 5.18 0.60 N
43 1 "O5'" B DC 12 ? ? P B DC 12 ? ? OP2 B DC 12 ? ? 99.36 105.70 -6.33 0.90 N
44 1 C6 B DC 12 ? ? N1 B DC 12 ? ? C2 B DC 12 ? ? 124.92 120.30 4.62 0.40 N
45 1 C2 B DC 12 ? ? N3 B DC 12 ? ? C4 B DC 12 ? ? 116.42 119.90 -3.48 0.50 N
46 1 N3 B DC 12 ? ? C4 B DC 12 ? ? C5 B DC 12 ? ? 126.27 121.90 4.37 0.40 N
47 1 N3 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 126.17 121.90 4.27 0.70 N
48 1 C5 B DC 12 ? ? C4 B DC 12 ? ? N4 B DC 12 ? ? 112.78 120.20 -7.42 0.70 N
49 1 OP1 B DG 13 ? ? P B DG 13 ? ? OP2 B DG 13 ? ? 130.90 119.60 11.30 1.50 N
50 1 C2 B DG 13 ? ? N3 B DG 13 ? ? C4 B DG 13 ? ? 108.62 111.90 -3.28 0.50 N
51 1 N1 B DG 13 ? ? C6 B DG 13 ? ? O6 B DG 13 ? ? 123.72 119.90 3.82 0.60 N
52 1 C5 B DG 13 ? ? C6 B DG 13 ? ? O6 B DG 13 ? ? 124.45 128.60 -4.15 0.60 N
53 1 OP1 B DG 14 ? ? P B DG 14 ? ? OP2 B DG 14 ? ? 130.26 119.60 10.66 1.50 N
54 1 "O5'" B DG 14 ? ? P B DG 14 ? ? OP1 B DG 14 ? ? 98.89 105.70 -6.81 0.90 N
55 1 "O5'" B DG 14 ? ? P B DG 14 ? ? OP2 B DG 14 ? ? 118.54 110.70 7.84 1.20 N
56 1 "C5'" B DG 14 ? ? "C4'" B DG 14 ? ? "O4'" B DG 14 ? ? 118.43 109.80 8.63 1.10 N
57 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 110.19 108.30 1.89 0.30 N
58 1 N1 B DG 14 ? ? C2 B DG 14 ? ? N3 B DG 14 ? ? 119.33 123.90 -4.57 0.60 N
59 1 C2 B DG 14 ? ? N3 B DG 14 ? ? C4 B DG 14 ? ? 115.34 111.90 3.44 0.50 N
60 1 C8 B DG 14 ? ? N9 B DG 14 ? ? C4 B DG 14 ? ? 103.78 106.40 -2.62 0.40 N
61 1 "C3'" B DG 14 ? ? "O3'" B DG 14 ? ? P B DT 15 ? ? 127.62 119.70 7.92 1.20 Y
62 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 110.79 108.30 2.49 0.30 N
63 1 N3 B DT 15 ? ? C2 B DT 15 ? ? O2 B DT 15 ? ? 117.13 122.30 -5.17 0.60 N
64 1 C4 B DT 15 ? ? C5 B DT 15 ? ? C7 B DT 15 ? ? 123.47 119.00 4.47 0.60 N
65 1 C6 B DT 15 ? ? C5 B DT 15 ? ? C7 B DT 15 ? ? 116.29 122.90 -6.61 0.60 N
66 1 "O4'" B DA 16 ? ? "C1'" B DA 16 ? ? N9 B DA 16 ? ? 113.27 108.30 4.97 0.30 N
67 1 OP1 B DC 17 ? ? P B DC 17 ? ? OP2 B DC 17 ? ? 130.55 119.60 10.95 1.50 N
68 1 C2 B DC 17 ? ? N3 B DC 17 ? ? C4 B DC 17 ? ? 124.50 119.90 4.60 0.50 N
69 1 N1 B DC 17 ? ? C2 B DC 17 ? ? O2 B DC 17 ? ? 124.64 118.90 5.74 0.60 N
70 1 N3 B DC 17 ? ? C4 B DC 17 ? ? N4 B DC 17 ? ? 113.43 118.00 -4.57 0.70 N
71 1 C5 B DC 17 ? ? C4 B DC 17 ? ? N4 B DC 17 ? ? 125.09 120.20 4.89 0.70 N
72 1 "O5'" B DG 19 ? ? P B DG 19 ? ? OP1 B DG 19 ? ? 97.54 105.70 -8.16 0.90 N
73 1 "O5'" B DG 19 ? ? P B DG 19 ? ? OP2 B DG 19 ? ? 118.49 110.70 7.79 1.20 N
74 1 C4 B DG 19 ? ? C5 B DG 19 ? ? N7 B DG 19 ? ? 113.72 110.80 2.92 0.40 N
75 1 N3 B DG 19 ? ? C4 B DG 19 ? ? N9 B DG 19 ? ? 129.82 126.00 3.82 0.60 N
76 1 C6 B DG 19 ? ? C5 B DG 19 ? ? N7 B DG 19 ? ? 125.02 130.40 -5.38 0.60 N
77 1 N1 B DG 19 ? ? C6 B DG 19 ? ? O6 B DG 19 ? ? 127.46 119.90 7.56 0.60 N
78 1 C5 B DG 19 ? ? C6 B DG 19 ? ? O6 B DG 19 ? ? 118.77 128.60 -9.83 0.60 N
79 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 111.22 108.30 2.92 0.30 N
80 1 C2 B DG 20 ? ? N3 B DG 20 ? ? C4 B DG 20 ? ? 115.94 111.90 4.04 0.50 N
81 1 C4 B DG 20 ? ? C5 B DG 20 ? ? N7 B DG 20 ? ? 105.76 110.80 -5.04 0.40 N
82 1 C8 B DG 20 ? ? N9 B DG 20 ? ? C4 B DG 20 ? ? 101.60 106.40 -4.80 0.40 N
83 1 N9 B DG 20 ? ? C4 B DG 20 ? ? C5 B DG 20 ? ? 112.05 105.40 6.65 0.40 N
84 1 N3 B DG 20 ? ? C4 B DG 20 ? ? N9 B DG 20 ? ? 120.66 126.00 -5.34 0.60 N
85 1 C6 B DG 20 ? ? C5 B DG 20 ? ? N7 B DG 20 ? ? 135.88 130.40 5.48 0.60 N
86 1 N1 B DG 20 ? ? C2 B DG 20 ? ? N2 B DG 20 ? ? 123.94 116.20 7.74 0.90 N
87 1 N3 B DG 20 ? ? C2 B DG 20 ? ? N2 B DG 20 ? ? 112.25 119.90 -7.65 0.70 N
88 1 C8 B DG 20 ? ? N9 B DG 20 ? ? "C1'" B DG 20 ? ? 136.13 127.00 9.13 1.30 N
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 110
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id E
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
CA CA CA N N 1
DA OP3 O N N 2
DA P P N N 3
DA OP1 O N N 4
DA OP2 O N N 5
DA "O5'" O N N 6
DA "C5'" C N N 7
DA "C4'" C N R 8
DA "O4'" O N N 9
DA "C3'" C N S 10
DA "O3'" O N N 11
DA "C2'" C N N 12
DA "C1'" C N R 13
DA N9 N Y N 14
DA C8 C Y N 15
DA N7 N Y N 16
DA C5 C Y N 17
DA C6 C Y N 18
DA N6 N N N 19
DA N1 N Y N 20
DA C2 C Y N 21
DA N3 N Y N 22
DA C4 C Y N 23
DA HOP3 H N N 24
DA HOP2 H N N 25
DA "H5'" H N N 26
DA "H5''" H N N 27
DA "H4'" H N N 28
DA "H3'" H N N 29
DA "HO3'" H N N 30
DA "H2'" H N N 31
DA "H2''" H N N 32
DA "H1'" H N N 33
DA H8 H N N 34
DA H61 H N N 35
DA H62 H N N 36
DA H2 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
DT OP3 O N N 109
DT P P N N 110
DT OP1 O N N 111
DT OP2 O N N 112
DT "O5'" O N N 113
DT "C5'" C N N 114
DT "C4'" C N R 115
DT "O4'" O N N 116
DT "C3'" C N S 117
DT "O3'" O N N 118
DT "C2'" C N N 119
DT "C1'" C N R 120
DT N1 N N N 121
DT C2 C N N 122
DT O2 O N N 123
DT N3 N N N 124
DT C4 C N N 125
DT O4 O N N 126
DT C5 C N N 127
DT C7 C N N 128
DT C6 C N N 129
DT HOP3 H N N 130
DT HOP2 H N N 131
DT "H5'" H N N 132
DT "H5''" H N N 133
DT "H4'" H N N 134
DT "H3'" H N N 135
DT "HO3'" H N N 136
DT "H2'" H N N 137
DT "H2''" H N N 138
DT "H1'" H N N 139
DT H3 H N N 140
DT H71 H N N 141
DT H72 H N N 142
DT H73 H N N 143
DT H6 H N N 144
HOH O O N N 145
HOH H1 H N N 146
HOH H2 H N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
_ndb_struct_conf_na.entry_id 1NT8
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 B DG 10 1_555 0.234 -0.259 0.355 -6.419 -12.651 -2.443 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1
1 A DC 2 1_555 B DG 9 1_555 -0.166 -0.122 0.244 0.629 -5.970 -8.176 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1
1 A DG 3 1_555 B DC 8 1_555 -0.334 -0.160 0.328 7.214 7.598 -0.987 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1
1 A DG 4 1_555 B DC 7 1_555 -0.409 -0.098 0.249 1.689 -19.638 0.022 4 A_DG4:DC17_B A 4 ? B 17 ? 19 1
1 A DT 5 1_555 B DA 6 1_555 -0.585 0.314 0.136 -13.410 -11.556 -3.981 5 A_DT5:DA16_B A 5 ? B 16 ? 20 1
1 A DA 6 1_555 B DT 5 1_555 0.013 -0.040 0.252 7.637 -13.589 -2.690 6 A_DA6:DT15_B A 6 ? B 15 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 -0.225 2.294 3.379 5.848 3.403 34.018 3.296 1.332 3.500 5.747 -9.874
34.665 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ?
1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 0.246 2.542 3.241 -2.732 -3.319 39.410 4.121 -0.669 3.002 -4.904 4.037
39.635 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ?
1 A DG 3 1_555 B DC 8 1_555 A DG 4 1_555 B DC 7 1_555 -1.257 1.449 3.583 -3.839 6.998 37.737 1.196 1.356 3.885 10.673 5.855
38.542 3 AA_DG3DG4:DC17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ?
1 A DG 4 1_555 B DC 7 1_555 A DT 5 1_555 B DA 6 1_555 0.503 0.682 3.674 1.717 -5.208 37.650 1.783 -0.529 3.570 -8.018 -2.643
38.033 4 AA_DG4DT5:DA16DC17_BB A 4 ? B 17 ? A 5 ? B 16 ?
1 A DT 5 1_555 B DA 6 1_555 A DA 6 1_555 B DT 5 1_555 0.022 1.301 2.927 -1.664 6.850 34.569 1.200 -0.266 3.116 11.381 2.764
35.259 5 AA_DT5DA6:DT15DA16_BB A 5 ? B 16 ? A 6 ? B 15 ?
#
_atom_sites.entry_id 1NT8
_atom_sites.fract_transf_matrix[1][1] 0.015163
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.005511
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.042095
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.028599
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CA
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? -17.119 -3.768 15.773 1.00 37.55 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? -18.318 -4.392 16.249 1.00 42.41 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? -18.556 -5.594 15.327 1.00 39.19 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? -19.182 -5.048 14.173 1.00 37.84 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? -17.324 -6.299 14.751 1.00 38.29 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? -17.574 -7.694 14.616 1.00 37.24 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? -17.011 -5.620 13.416 1.00 40.60 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? -18.445 -5.273 12.971 1.00 35.82 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? -18.680 -4.118 11.957 1.00 34.79 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? -18.570 -4.366 10.581 1.00 28.93 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? -18.164 -5.480 10.196 1.00 26.94 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? -18.837 -3.372 9.674 1.00 28.32 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? -19.217 -2.186 10.092 1.00 33.85 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? -19.437 -1.253 9.160 1.00 29.73 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? -19.355 -1.909 11.514 1.00 33.59 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? -19.129 -2.902 12.372 1.00 34.70 ? 1 DC A C6 1
ATOM 17 P P . DC A 1 2 ? -16.695 -8.762 15.387 1.00 37.63 ? 2 DC A P 1
ATOM 18 O OP1 . DC A 1 2 ? -17.420 -10.021 15.112 1.00 32.88 ? 2 DC A OP1 1
ATOM 19 O OP2 . DC A 1 2 ? -16.319 -8.316 16.780 1.00 41.91 ? 2 DC A OP2 1
ATOM 20 O "O5'" . DC A 1 2 ? -15.287 -8.573 14.644 1.00 47.02 ? 2 DC A "O5'" 1
ATOM 21 C "C5'" . DC A 1 2 ? -14.846 -9.366 13.542 1.00 44.99 ? 2 DC A "C5'" 1
ATOM 22 C "C4'" . DC A 1 2 ? -13.650 -8.652 12.970 1.00 44.62 ? 2 DC A "C4'" 1
ATOM 23 O "O4'" . DC A 1 2 ? -13.999 -7.257 12.702 1.00 44.87 ? 2 DC A "O4'" 1
ATOM 24 C "C3'" . DC A 1 2 ? -12.451 -8.493 13.887 1.00 45.70 ? 2 DC A "C3'" 1
ATOM 25 O "O3'" . DC A 1 2 ? -11.348 -8.947 13.124 1.00 48.59 ? 2 DC A "O3'" 1
ATOM 26 C "C2'" . DC A 1 2 ? -12.415 -7.003 14.216 1.00 43.89 ? 2 DC A "C2'" 1
ATOM 27 C "C1'" . DC A 1 2 ? -12.851 -6.497 12.863 1.00 38.78 ? 2 DC A "C1'" 1
ATOM 28 N N1 . DC A 1 2 ? -13.493 -5.158 12.727 1.00 34.60 ? 2 DC A N1 1
ATOM 29 C C2 . DC A 1 2 ? -13.871 -4.826 11.419 1.00 34.77 ? 2 DC A C2 1
ATOM 30 O O2 . DC A 1 2 ? -13.617 -5.562 10.450 1.00 31.92 ? 2 DC A O2 1
ATOM 31 N N3 . DC A 1 2 ? -14.412 -3.652 11.251 1.00 29.31 ? 2 DC A N3 1
ATOM 32 C C4 . DC A 1 2 ? -14.720 -2.812 12.215 1.00 33.99 ? 2 DC A C4 1
ATOM 33 N N4 . DC A 1 2 ? -15.314 -1.679 11.829 1.00 35.44 ? 2 DC A N4 1
ATOM 34 C C5 . DC A 1 2 ? -14.364 -3.100 13.578 1.00 32.64 ? 2 DC A C5 1
ATOM 35 C C6 . DC A 1 2 ? -13.741 -4.301 13.762 1.00 29.32 ? 2 DC A C6 1
ATOM 36 P P . DG A 1 3 ? -10.782 -10.409 13.429 1.00 51.12 ? 3 DG A P 1
ATOM 37 O OP1 . DG A 1 3 ? -11.864 -11.413 13.375 1.00 51.08 ? 3 DG A OP1 1
ATOM 38 O OP2 . DG A 1 3 ? -9.947 -10.087 14.628 1.00 47.02 ? 3 DG A OP2 1
ATOM 39 O "O5'" . DG A 1 3 ? -9.855 -10.789 12.197 1.00 52.21 ? 3 DG A "O5'" 1
ATOM 40 C "C5'" . DG A 1 3 ? -10.402 -10.839 10.899 1.00 52.49 ? 3 DG A "C5'" 1
ATOM 41 C "C4'" . DG A 1 3 ? -9.596 -9.985 9.918 1.00 52.32 ? 3 DG A "C4'" 1
ATOM 42 O "O4'" . DG A 1 3 ? -9.875 -8.541 9.982 1.00 49.98 ? 3 DG A "O4'" 1
ATOM 43 C "C3'" . DG A 1 3 ? -8.074 -10.010 10.007 1.00 52.32 ? 3 DG A "C3'" 1
ATOM 44 O "O3'" . DG A 1 3 ? -7.654 -9.751 8.672 1.00 55.20 ? 3 DG A "O3'" 1
ATOM 45 C "C2'" . DG A 1 3 ? -7.758 -8.807 10.884 1.00 49.61 ? 3 DG A "C2'" 1
ATOM 46 C "C1'" . DG A 1 3 ? -8.679 -7.788 10.211 1.00 44.84 ? 3 DG A "C1'" 1
ATOM 47 N N9 . DG A 1 3 ? -9.133 -6.665 10.991 1.00 41.90 ? 3 DG A N9 1
ATOM 48 C C8 . DG A 1 3 ? -9.087 -6.562 12.353 1.00 34.57 ? 3 DG A C8 1
ATOM 49 N N7 . DG A 1 3 ? -9.645 -5.480 12.798 1.00 35.40 ? 3 DG A N7 1
ATOM 50 C C5 . DG A 1 3 ? -10.082 -4.851 11.632 1.00 35.82 ? 3 DG A C5 1
ATOM 51 C C6 . DG A 1 3 ? -10.779 -3.646 11.513 1.00 30.35 ? 3 DG A C6 1
ATOM 52 O O6 . DG A 1 3 ? -11.069 -2.873 12.427 1.00 39.36 ? 3 DG A O6 1
ATOM 53 N N1 . DG A 1 3 ? -11.027 -3.271 10.229 1.00 31.73 ? 3 DG A N1 1
ATOM 54 C C2 . DG A 1 3 ? -10.738 -4.075 9.151 1.00 32.97 ? 3 DG A C2 1
ATOM 55 N N2 . DG A 1 3 ? -11.106 -3.522 8.000 1.00 40.28 ? 3 DG A N2 1
ATOM 56 N N3 . DG A 1 3 ? -10.082 -5.242 9.241 1.00 37.72 ? 3 DG A N3 1
ATOM 57 C C4 . DG A 1 3 ? -9.810 -5.566 10.519 1.00 32.89 ? 3 DG A C4 1
ATOM 58 P P . DG A 1 4 ? -6.966 -10.905 7.799 1.00 57.30 ? 4 DG A P 1
ATOM 59 O OP1 . DG A 1 4 ? -7.922 -12.053 8.007 1.00 56.10 ? 4 DG A OP1 1
ATOM 60 O OP2 . DG A 1 4 ? -5.582 -10.771 8.349 1.00 53.41 ? 4 DG A OP2 1
ATOM 61 O "O5'" . DG A 1 4 ? -7.059 -10.490 6.253 1.00 54.26 ? 4 DG A "O5'" 1
ATOM 62 C "C5'" . DG A 1 4 ? -8.209 -9.779 5.714 1.00 54.51 ? 4 DG A "C5'" 1
ATOM 63 C "C4'" . DG A 1 4 ? -7.864 -8.652 4.720 1.00 52.41 ? 4 DG A "C4'" 1
ATOM 64 O "O4'" . DG A 1 4 ? -7.825 -7.292 5.274 1.00 51.72 ? 4 DG A "O4'" 1
ATOM 65 C "C3'" . DG A 1 4 ? -6.493 -8.741 4.062 1.00 50.83 ? 4 DG A "C3'" 1
ATOM 66 O "O3'" . DG A 1 4 ? -6.700 -8.202 2.787 1.00 50.66 ? 4 DG A "O3'" 1
ATOM 67 C "C2'" . DG A 1 4 ? -5.563 -7.925 4.983 1.00 49.82 ? 4 DG A "C2'" 1
ATOM 68 C "C1'" . DG A 1 4 ? -6.491 -6.775 5.324 1.00 48.88 ? 4 DG A "C1'" 1
ATOM 69 N N9 . DG A 1 4 ? -6.417 -6.255 6.661 1.00 44.87 ? 4 DG A N9 1
ATOM 70 C C8 . DG A 1 4 ? -5.961 -6.936 7.808 1.00 39.49 ? 4 DG A C8 1
ATOM 71 N N7 . DG A 1 4 ? -6.068 -6.194 8.859 1.00 37.73 ? 4 DG A N7 1
ATOM 72 C C5 . DG A 1 4 ? -6.680 -5.045 8.387 1.00 34.92 ? 4 DG A C5 1
ATOM 73 C C6 . DG A 1 4 ? -7.044 -3.970 9.177 1.00 32.64 ? 4 DG A C6 1
ATOM 74 O O6 . DG A 1 4 ? -6.869 -3.814 10.380 1.00 34.54 ? 4 DG A O6 1
ATOM 75 N N1 . DG A 1 4 ? -7.597 -2.999 8.408 1.00 35.12 ? 4 DG A N1 1
ATOM 76 C C2 . DG A 1 4 ? -7.791 -3.002 7.064 1.00 32.49 ? 4 DG A C2 1
ATOM 77 N N2 . DG A 1 4 ? -8.386 -1.841 6.757 1.00 30.23 ? 4 DG A N2 1
ATOM 78 N N3 . DG A 1 4 ? -7.507 -4.059 6.249 1.00 35.04 ? 4 DG A N3 1
ATOM 79 C C4 . DG A 1 4 ? -6.913 -5.027 7.025 1.00 36.04 ? 4 DG A C4 1
ATOM 80 P P . DT A 1 5 ? -5.494 -7.865 1.762 1.00 50.97 ? 5 DT A P 1
ATOM 81 O OP1 . DT A 1 5 ? -6.161 -7.918 0.437 1.00 48.59 ? 5 DT A OP1 1
ATOM 82 O OP2 . DT A 1 5 ? -4.376 -8.731 2.183 1.00 48.98 ? 5 DT A OP2 1
ATOM 83 O "O5'" . DT A 1 5 ? -5.274 -6.282 1.927 1.00 46.99 ? 5 DT A "O5'" 1
ATOM 84 C "C5'" . DT A 1 5 ? -6.244 -5.511 1.167 1.00 46.35 ? 5 DT A "C5'" 1
ATOM 85 C "C4'" . DT A 1 5 ? -5.880 -4.113 1.457 1.00 44.81 ? 5 DT A "C4'" 1
ATOM 86 O "O4'" . DT A 1 5 ? -5.773 -4.114 2.873 1.00 46.20 ? 5 DT A "O4'" 1
ATOM 87 C "C3'" . DT A 1 5 ? -4.463 -3.798 0.910 1.00 45.93 ? 5 DT A "C3'" 1
ATOM 88 O "O3'" . DT A 1 5 ? -4.554 -2.695 0.125 1.00 40.74 ? 5 DT A "O3'" 1
ATOM 89 C "C2'" . DT A 1 5 ? -3.563 -3.579 2.134 1.00 42.03 ? 5 DT A "C2'" 1
ATOM 90 C "C1'" . DT A 1 5 ? -4.598 -3.425 3.276 1.00 45.43 ? 5 DT A "C1'" 1
ATOM 91 N N1 . DT A 1 5 ? -4.143 -3.741 4.735 1.00 42.38 ? 5 DT A N1 1
ATOM 92 C C2 . DT A 1 5 ? -4.355 -2.770 5.737 1.00 41.38 ? 5 DT A C2 1
ATOM 93 O O2 . DT A 1 5 ? -4.937 -1.689 5.584 1.00 44.97 ? 5 DT A O2 1
ATOM 94 N N3 . DT A 1 5 ? -3.924 -3.109 6.972 1.00 39.56 ? 5 DT A N3 1
ATOM 95 C C4 . DT A 1 5 ? -3.282 -4.303 7.330 1.00 42.27 ? 5 DT A C4 1
ATOM 96 O O4 . DT A 1 5 ? -2.970 -4.469 8.498 1.00 44.38 ? 5 DT A O4 1
ATOM 97 C C5 . DT A 1 5 ? -3.038 -5.265 6.246 1.00 42.11 ? 5 DT A C5 1
ATOM 98 C C7 . DT A 1 5 ? -2.355 -6.609 6.445 1.00 42.99 ? 5 DT A C7 1
ATOM 99 C C6 . DT A 1 5 ? -3.490 -4.935 5.023 1.00 43.14 ? 5 DT A C6 1
ATOM 100 P P . DA A 1 6 ? -3.323 -2.292 -0.814 1.00 41.17 ? 6 DA A P 1
ATOM 101 O OP1 . DA A 1 6 ? -3.786 -1.975 -2.151 1.00 42.76 ? 6 DA A OP1 1
ATOM 102 O OP2 . DA A 1 6 ? -2.237 -3.323 -0.684 1.00 39.68 ? 6 DA A OP2 1
ATOM 103 O "O5'" . DA A 1 6 ? -3.128 -0.995 0.049 1.00 35.43 ? 6 DA A "O5'" 1
ATOM 104 C "C5'" . DA A 1 6 ? -4.245 -0.184 0.236 1.00 33.20 ? 6 DA A "C5'" 1
ATOM 105 C "C4'" . DA A 1 6 ? -3.718 1.069 0.979 1.00 33.48 ? 6 DA A "C4'" 1
ATOM 106 O "O4'" . DA A 1 6 ? -3.363 0.655 2.304 1.00 34.69 ? 6 DA A "O4'" 1
ATOM 107 C "C3'" . DA A 1 6 ? -2.444 1.638 0.391 1.00 37.97 ? 6 DA A "C3'" 1
ATOM 108 O "O3'" . DA A 1 6 ? -2.410 3.024 0.523 1.00 44.07 ? 6 DA A "O3'" 1
ATOM 109 C "C2'" . DA A 1 6 ? -1.321 0.965 1.197 1.00 34.69 ? 6 DA A "C2'" 1
ATOM 110 C "C1'" . DA A 1 6 ? -1.954 0.815 2.568 1.00 38.77 ? 6 DA A "C1'" 1
ATOM 111 N N9 . DA A 1 6 ? -1.443 -0.269 3.444 1.00 34.94 ? 6 DA A N9 1
ATOM 112 C C8 . DA A 1 6 ? -0.913 -1.450 3.113 1.00 31.34 ? 6 DA A C8 1
ATOM 113 N N7 . DA A 1 6 ? -0.561 -2.233 4.099 1.00 27.60 ? 6 DA A N7 1
ATOM 114 C C5 . DA A 1 6 ? -0.959 -1.443 5.198 1.00 35.72 ? 6 DA A C5 1
ATOM 115 C C6 . DA A 1 6 ? -0.903 -1.708 6.576 1.00 30.30 ? 6 DA A C6 1
ATOM 116 N N6 . DA A 1 6 ? -0.356 -2.824 7.021 1.00 29.26 ? 6 DA A N6 1
ATOM 117 N N1 . DA A 1 6 ? -1.321 -0.760 7.390 1.00 32.70 ? 6 DA A N1 1
ATOM 118 C C2 . DA A 1 6 ? -1.850 0.384 6.953 1.00 34.20 ? 6 DA A C2 1
ATOM 119 N N3 . DA A 1 6 ? -1.984 0.779 5.690 1.00 36.45 ? 6 DA A N3 1
ATOM 120 C C4 . DA A 1 6 ? -1.517 -0.236 4.852 1.00 36.62 ? 6 DA A C4 1
ATOM 121 P P . DC A 1 7 ? -3.086 4.008 -0.560 1.00 46.35 ? 7 DC A P 1
ATOM 122 O OP1 . DC A 1 7 ? -3.139 5.355 0.096 1.00 43.73 ? 7 DC A OP1 1
ATOM 123 O OP2 . DC A 1 7 ? -4.279 3.268 -1.085 1.00 44.72 ? 7 DC A OP2 1
ATOM 124 O "O5'" . DC A 1 7 ? -1.991 4.011 -1.728 1.00 41.59 ? 7 DC A "O5'" 1
ATOM 125 C "C5'" . DC A 1 7 ? -1.077 5.049 -1.780 1.00 43.54 ? 7 DC A "C5'" 1
ATOM 126 C "C4'" . DC A 1 7 ? -0.151 4.917 -2.980 1.00 41.90 ? 7 DC A "C4'" 1
ATOM 127 O "O4'" . DC A 1 7 ? 0.091 3.529 -3.414 1.00 35.81 ? 7 DC A "O4'" 1
ATOM 128 C "C3'" . DC A 1 7 ? -0.766 5.642 -4.175 1.00 39.03 ? 7 DC A "C3'" 1
ATOM 129 O "O3'" . DC A 1 7 ? 0.310 6.315 -4.881 1.00 42.12 ? 7 DC A "O3'" 1
ATOM 130 C "C2'" . DC A 1 7 ? -1.488 4.503 -4.887 1.00 37.03 ? 7 DC A "C2'" 1
ATOM 131 C "C1'" . DC A 1 7 ? -0.506 3.358 -4.706 1.00 34.09 ? 7 DC A "C1'" 1
ATOM 132 N N1 . DC A 1 7 ? -1.113 2.048 -4.900 1.00 32.45 ? 7 DC A N1 1
ATOM 133 C C2 . DC A 1 7 ? -1.217 1.628 -6.207 1.00 36.20 ? 7 DC A C2 1
ATOM 134 O O2 . DC A 1 7 ? -0.833 2.361 -7.105 1.00 32.91 ? 7 DC A O2 1
ATOM 135 N N3 . DC A 1 7 ? -1.733 0.454 -6.462 1.00 37.09 ? 7 DC A N3 1
ATOM 136 C C4 . DC A 1 7 ? -2.181 -0.302 -5.456 1.00 37.55 ? 7 DC A C4 1
ATOM 137 N N4 . DC A 1 7 ? -2.686 -1.455 -5.825 1.00 30.71 ? 7 DC A N4 1
ATOM 138 C C5 . DC A 1 7 ? -2.095 0.097 -4.091 1.00 30.84 ? 7 DC A C5 1
ATOM 139 C C6 . DC A 1 7 ? -1.560 1.281 -3.862 1.00 32.83 ? 7 DC A C6 1
ATOM 140 P P . DC A 1 8 ? 0.179 7.925 -4.683 1.00 44.97 ? 8 DC A P 1
ATOM 141 O OP1 . DC A 1 8 ? 1.408 8.602 -5.155 1.00 44.91 ? 8 DC A OP1 1
ATOM 142 O OP2 . DC A 1 8 ? -0.531 8.290 -3.432 1.00 44.91 ? 8 DC A OP2 1
ATOM 143 O "O5'" . DC A 1 8 ? -0.906 8.309 -5.795 1.00 45.45 ? 8 DC A "O5'" 1
ATOM 144 C "C5'" . DC A 1 8 ? -0.719 8.228 -7.207 1.00 44.41 ? 8 DC A "C5'" 1
ATOM 145 C "C4'" . DC A 1 8 ? -2.053 8.144 -7.898 1.00 41.57 ? 8 DC A "C4'" 1
ATOM 146 O "O4'" . DC A 1 8 ? -2.752 6.918 -7.550 1.00 37.77 ? 8 DC A "O4'" 1
ATOM 147 C "C3'" . DC A 1 8 ? -2.972 9.249 -7.440 1.00 44.30 ? 8 DC A "C3'" 1
ATOM 148 O "O3'" . DC A 1 8 ? -3.724 9.726 -8.549 1.00 47.35 ? 8 DC A "O3'" 1
ATOM 149 C "C2'" . DC A 1 8 ? -3.765 8.544 -6.346 1.00 40.81 ? 8 DC A "C2'" 1
ATOM 150 C "C1'" . DC A 1 8 ? -4.063 7.258 -7.070 1.00 36.80 ? 8 DC A "C1'" 1
ATOM 151 N N1 . DC A 1 8 ? -4.486 6.083 -6.267 1.00 34.25 ? 8 DC A N1 1
ATOM 152 C C2 . DC A 1 8 ? -4.691 4.934 -6.972 1.00 33.20 ? 8 DC A C2 1
ATOM 153 O O2 . DC A 1 8 ? -4.640 5.033 -8.187 1.00 35.06 ? 8 DC A O2 1
ATOM 154 N N3 . DC A 1 8 ? -5.047 3.800 -6.342 1.00 37.58 ? 8 DC A N3 1
ATOM 155 C C4 . DC A 1 8 ? -5.128 3.775 -4.998 1.00 36.75 ? 8 DC A C4 1
ATOM 156 N N4 . DC A 1 8 ? -5.443 2.615 -4.378 1.00 35.50 ? 8 DC A N4 1
ATOM 157 C C5 . DC A 1 8 ? -4.921 4.950 -4.262 1.00 34.91 ? 8 DC A C5 1
ATOM 158 C C6 . DC A 1 8 ? -4.599 6.093 -4.900 1.00 30.09 ? 8 DC A C6 1
ATOM 159 P P . DG A 1 9 ? -3.368 11.089 -9.293 1.00 48.27 ? 9 DG A P 1
ATOM 160 O OP1 . DG A 1 9 ? -1.910 11.063 -9.526 1.00 53.48 ? 9 DG A OP1 1
ATOM 161 O OP2 . DG A 1 9 ? -4.064 12.037 -8.321 1.00 42.53 ? 9 DG A OP2 1
ATOM 162 O "O5'" . DG A 1 9 ? -4.102 11.059 -10.699 1.00 48.02 ? 9 DG A "O5'" 1
ATOM 163 C "C5'" . DG A 1 9 ? -3.938 9.989 -11.637 1.00 47.78 ? 9 DG A "C5'" 1
ATOM 164 C "C4'" . DG A 1 9 ? -5.247 9.518 -12.237 1.00 48.95 ? 9 DG A "C4'" 1
ATOM 165 O "O4'" . DG A 1 9 ? -5.909 8.548 -11.398 1.00 44.49 ? 9 DG A "O4'" 1
ATOM 166 C "C3'" . DG A 1 9 ? -6.272 10.655 -12.434 1.00 48.99 ? 9 DG A "C3'" 1
ATOM 167 O "O3'" . DG A 1 9 ? -7.214 10.412 -13.478 1.00 52.37 ? 9 DG A "O3'" 1
ATOM 168 C "C2'" . DG A 1 9 ? -7.000 10.644 -11.103 1.00 46.17 ? 9 DG A "C2'" 1
ATOM 169 C "C1'" . DG A 1 9 ? -7.112 9.131 -10.894 1.00 44.63 ? 9 DG A "C1'" 1
ATOM 170 N N9 . DG A 1 9 ? -7.240 8.782 -9.508 1.00 37.91 ? 9 DG A N9 1
ATOM 171 C C8 . DG A 1 9 ? -7.070 9.594 -8.437 1.00 37.74 ? 9 DG A C8 1
ATOM 172 N N7 . DG A 1 9 ? -7.228 8.965 -7.293 1.00 38.20 ? 9 DG A N7 1
ATOM 173 C C5 . DG A 1 9 ? -7.530 7.659 -7.662 1.00 37.44 ? 9 DG A C5 1
ATOM 174 C C6 . DG A 1 9 ? -7.777 6.496 -6.897 1.00 37.67 ? 9 DG A C6 1
ATOM 175 O O6 . DG A 1 9 ? -7.825 6.256 -5.679 1.00 40.05 ? 9 DG A O6 1
ATOM 176 N N1 . DG A 1 9 ? -8.033 5.417 -7.706 1.00 33.84 ? 9 DG A N1 1
ATOM 177 C C2 . DG A 1 9 ? -8.018 5.369 -9.047 1.00 32.49 ? 9 DG A C2 1
ATOM 178 N N2 . DG A 1 9 ? -8.289 4.165 -9.495 1.00 32.63 ? 9 DG A N2 1
ATOM 179 N N3 . DG A 1 9 ? -7.768 6.428 -9.822 1.00 34.09 ? 9 DG A N3 1
ATOM 180 C C4 . DG A 1 9 ? -7.538 7.534 -9.040 1.00 37.86 ? 9 DG A C4 1
ATOM 181 P P . DG A 1 10 ? -7.146 10.786 -15.028 1.00 48.16 ? 10 DG A P 1
ATOM 182 O OP1 . DG A 1 10 ? -5.959 10.188 -15.663 1.00 47.61 ? 10 DG A OP1 1
ATOM 183 O OP2 . DG A 1 10 ? -7.471 12.193 -14.811 1.00 45.95 ? 10 DG A OP2 1
ATOM 184 O "O5'" . DG A 1 10 ? -8.324 9.829 -15.446 1.00 39.77 ? 10 DG A "O5'" 1
ATOM 185 C "C5'" . DG A 1 10 ? -8.032 8.702 -16.177 1.00 43.80 ? 10 DG A "C5'" 1
ATOM 186 C "C4'" . DG A 1 10 ? -9.154 7.718 -16.046 1.00 43.54 ? 10 DG A "C4'" 1
ATOM 187 O "O4'" . DG A 1 10 ? -9.411 7.481 -14.650 1.00 40.62 ? 10 DG A "O4'" 1
ATOM 188 C "C3'" . DG A 1 10 ? -10.435 8.302 -16.657 1.00 46.84 ? 10 DG A "C3'" 1
ATOM 189 O "O3'" . DG A 1 10 ? -11.260 7.265 -17.248 1.00 50.27 ? 10 DG A "O3'" 1
ATOM 190 C "C2'" . DG A 1 10 ? -11.080 8.996 -15.466 1.00 45.43 ? 10 DG A "C2'" 1
ATOM 191 C "C1'" . DG A 1 10 ? -10.703 8.020 -14.344 1.00 46.40 ? 10 DG A "C1'" 1
ATOM 192 N N9 . DG A 1 10 ? -10.673 8.571 -13.007 1.00 42.05 ? 10 DG A N9 1
ATOM 193 C C8 . DG A 1 10 ? -10.429 9.848 -12.644 1.00 42.71 ? 10 DG A C8 1
ATOM 194 N N7 . DG A 1 10 ? -10.437 10.024 -11.361 1.00 43.01 ? 10 DG A N7 1
ATOM 195 C C5 . DG A 1 10 ? -10.673 8.744 -10.849 1.00 38.93 ? 10 DG A C5 1
ATOM 196 C C6 . DG A 1 10 ? -10.777 8.336 -9.509 1.00 39.97 ? 10 DG A C6 1
ATOM 197 O O6 . DG A 1 10 ? -10.663 9.038 -8.511 1.00 41.63 ? 10 DG A O6 1
ATOM 198 N N1 . DG A 1 10 ? -11.039 6.986 -9.371 1.00 39.05 ? 10 DG A N1 1
ATOM 199 C C2 . DG A 1 10 ? -11.193 6.114 -10.404 1.00 39.97 ? 10 DG A C2 1
ATOM 200 N N2 . DG A 1 10 ? -11.458 4.878 -10.033 1.00 40.50 ? 10 DG A N2 1
ATOM 201 N N3 . DG A 1 10 ? -11.101 6.458 -11.693 1.00 42.81 ? 10 DG A N3 1
ATOM 202 C C4 . DG A 1 10 ? -10.840 7.819 -11.834 1.00 42.82 ? 10 DG A C4 1
ATOM 203 O "O5'" . DC B 1 1 ? 11.305 1.674 1.940 1.00 53.31 ? 11 DC B "O5'" 1
ATOM 204 C "C5'" . DC B 1 1 ? 12.707 1.427 1.996 1.00 49.11 ? 11 DC B "C5'" 1
ATOM 205 C "C4'" . DC B 1 1 ? 13.246 1.908 3.324 1.00 48.70 ? 11 DC B "C4'" 1
ATOM 206 O "O4'" . DC B 1 1 ? 12.848 3.307 3.598 1.00 39.91 ? 11 DC B "O4'" 1
ATOM 207 C "C3'" . DC B 1 1 ? 12.691 1.057 4.470 1.00 45.31 ? 11 DC B "C3'" 1
ATOM 208 O "O3'" . DC B 1 1 ? 13.730 0.539 5.172 1.00 43.57 ? 11 DC B "O3'" 1
ATOM 209 C "C2'" . DC B 1 1 ? 11.911 2.031 5.328 1.00 44.82 ? 11 DC B "C2'" 1
ATOM 210 C "C1'" . DC B 1 1 ? 12.682 3.308 4.967 1.00 42.96 ? 11 DC B "C1'" 1
ATOM 211 N N1 . DC B 1 1 ? 12.001 4.551 5.164 1.00 38.90 ? 11 DC B N1 1
ATOM 212 C C2 . DC B 1 1 ? 11.855 5.062 6.468 1.00 34.48 ? 11 DC B C2 1
ATOM 213 O O2 . DC B 1 1 ? 12.250 4.486 7.484 1.00 36.33 ? 11 DC B O2 1
ATOM 214 N N3 . DC B 1 1 ? 11.281 6.242 6.570 1.00 30.72 ? 11 DC B N3 1
ATOM 215 C C4 . DC B 1 1 ? 10.833 6.839 5.462 1.00 29.68 ? 11 DC B C4 1
ATOM 216 N N4 . DC B 1 1 ? 10.224 7.983 5.683 1.00 33.47 ? 11 DC B N4 1
ATOM 217 C C5 . DC B 1 1 ? 10.949 6.336 4.140 1.00 36.66 ? 11 DC B C5 1
ATOM 218 C C6 . DC B 1 1 ? 11.572 5.185 4.009 1.00 36.47 ? 11 DC B C6 1
ATOM 219 P P . DC B 1 2 ? 13.834 -0.979 5.273 1.00 49.50 ? 12 DC B P 1
ATOM 220 O OP1 . DC B 1 2 ? 14.841 -1.416 6.237 1.00 50.64 ? 12 DC B OP1 1
ATOM 221 O OP2 . DC B 1 2 ? 13.680 -1.537 3.922 1.00 55.34 ? 12 DC B OP2 1
ATOM 222 O "O5'" . DC B 1 2 ? 12.380 -1.386 5.896 1.00 44.18 ? 12 DC B "O5'" 1
ATOM 223 C "C5'" . DC B 1 2 ? 12.438 -1.745 7.306 1.00 44.56 ? 12 DC B "C5'" 1
ATOM 224 C "C4'" . DC B 1 2 ? 11.112 -1.568 7.991 1.00 38.34 ? 12 DC B "C4'" 1
ATOM 225 O "O4'" . DC B 1 2 ? 10.515 -0.305 7.643 1.00 36.05 ? 12 DC B "O4'" 1
ATOM 226 C "C3'" . DC B 1 2 ? 10.167 -2.609 7.442 1.00 35.15 ? 12 DC B "C3'" 1
ATOM 227 O "O3'" . DC B 1 2 ? 9.358 -3.172 8.519 1.00 43.17 ? 12 DC B "O3'" 1
ATOM 228 C "C2'" . DC B 1 2 ? 9.393 -1.845 6.388 1.00 37.62 ? 12 DC B "C2'" 1
ATOM 229 C "C1'" . DC B 1 2 ? 9.193 -0.560 7.092 1.00 36.59 ? 12 DC B "C1'" 1
ATOM 230 N N1 . DC B 1 2 ? 8.788 0.667 6.337 1.00 37.38 ? 12 DC B N1 1
ATOM 231 C C2 . DC B 1 2 ? 8.505 1.749 7.110 1.00 35.95 ? 12 DC B C2 1
ATOM 232 O O2 . DC B 1 2 ? 8.559 1.580 8.358 1.00 35.29 ? 12 DC B O2 1
ATOM 233 N N3 . DC B 1 2 ? 8.190 2.918 6.464 1.00 36.41 ? 12 DC B N3 1
ATOM 234 C C4 . DC B 1 2 ? 8.138 2.864 5.107 1.00 35.12 ? 12 DC B C4 1
ATOM 235 N N4 . DC B 1 2 ? 7.875 3.895 4.427 1.00 31.61 ? 12 DC B N4 1
ATOM 236 C C5 . DC B 1 2 ? 8.422 1.734 4.302 1.00 36.79 ? 12 DC B C5 1
ATOM 237 C C6 . DC B 1 2 ? 8.726 0.643 4.967 1.00 38.51 ? 12 DC B C6 1
ATOM 238 P P . DG B 1 3 ? 9.813 -4.604 9.093 1.00 44.23 ? 13 DG B P 1
ATOM 239 O OP1 . DG B 1 3 ? 11.266 -4.462 9.357 1.00 41.32 ? 13 DG B OP1 1
ATOM 240 O OP2 . DG B 1 3 ? 9.100 -5.476 8.202 1.00 36.24 ? 13 DG B OP2 1
ATOM 241 O "O5'" . DG B 1 3 ? 9.109 -4.737 10.567 1.00 43.28 ? 13 DG B "O5'" 1
ATOM 242 C "C5'" . DG B 1 3 ? 9.413 -3.702 11.513 1.00 40.57 ? 13 DG B "C5'" 1
ATOM 243 C "C4'" . DG B 1 3 ? 8.156 -3.043 11.996 1.00 40.52 ? 13 DG B "C4'" 1
ATOM 244 O "O4'" . DG B 1 3 ? 7.514 -2.105 11.059 1.00 33.05 ? 13 DG B "O4'" 1
ATOM 245 C "C3'" . DG B 1 3 ? 7.040 -4.054 12.324 1.00 37.70 ? 13 DG B "C3'" 1
ATOM 246 O "O3'" . DG B 1 3 ? 6.305 -3.525 13.402 1.00 43.74 ? 13 DG B "O3'" 1
ATOM 247 C "C2'" . DG B 1 3 ? 6.241 -4.099 11.054 1.00 39.12 ? 13 DG B "C2'" 1
ATOM 248 C "C1'" . DG B 1 3 ? 6.206 -2.618 10.686 1.00 37.51 ? 13 DG B "C1'" 1
ATOM 249 N N9 . DG B 1 3 ? 5.983 -2.340 9.260 1.00 31.90 ? 13 DG B N9 1
ATOM 250 C C8 . DG B 1 3 ? 5.999 -3.165 8.136 1.00 27.93 ? 13 DG B C8 1
ATOM 251 N N7 . DG B 1 3 ? 5.778 -2.493 7.012 1.00 30.40 ? 13 DG B N7 1
ATOM 252 C C5 . DG B 1 3 ? 5.618 -1.156 7.453 1.00 29.52 ? 13 DG B C5 1
ATOM 253 C C6 . DG B 1 3 ? 5.314 0.000 6.685 1.00 32.89 ? 13 DG B C6 1
ATOM 254 O O6 . DG B 1 3 ? 5.206 0.014 5.419 1.00 25.92 ? 13 DG B O6 1
ATOM 255 N N1 . DG B 1 3 ? 5.123 1.127 7.494 1.00 33.08 ? 13 DG B N1 1
ATOM 256 C C2 . DG B 1 3 ? 5.270 1.079 8.907 1.00 32.51 ? 13 DG B C2 1
ATOM 257 N N2 . DG B 1 3 ? 5.127 2.216 9.545 1.00 30.58 ? 13 DG B N2 1
ATOM 258 N N3 . DG B 1 3 ? 5.540 0.012 9.654 1.00 30.70 ? 13 DG B N3 1
ATOM 259 C C4 . DG B 1 3 ? 5.653 -1.073 8.838 1.00 32.67 ? 13 DG B C4 1
ATOM 260 P P . DG B 1 4 ? 6.180 -4.263 14.799 1.00 42.44 ? 14 DG B P 1
ATOM 261 O OP1 . DG B 1 4 ? 7.421 -4.037 15.573 1.00 43.96 ? 14 DG B OP1 1
ATOM 262 O OP2 . DG B 1 4 ? 5.551 -5.536 14.332 1.00 40.98 ? 14 DG B OP2 1
ATOM 263 O "O5'" . DG B 1 4 ? 5.254 -3.165 15.492 1.00 37.91 ? 14 DG B "O5'" 1
ATOM 264 C "C5'" . DG B 1 4 ? 5.702 -1.886 15.742 1.00 32.36 ? 14 DG B "C5'" 1
ATOM 265 C "C4'" . DG B 1 4 ? 4.581 -0.894 15.641 1.00 36.74 ? 14 DG B "C4'" 1
ATOM 266 O "O4'" . DG B 1 4 ? 4.040 -0.562 14.279 1.00 38.15 ? 14 DG B "O4'" 1
ATOM 267 C "C3'" . DG B 1 4 ? 3.383 -1.509 16.406 1.00 35.01 ? 14 DG B "C3'" 1
ATOM 268 O "O3'" . DG B 1 4 ? 2.829 -0.433 16.916 1.00 39.29 ? 14 DG B "O3'" 1
ATOM 269 C "C2'" . DG B 1 4 ? 2.619 -2.230 15.288 1.00 38.10 ? 14 DG B "C2'" 1
ATOM 270 C "C1'" . DG B 1 4 ? 2.744 -1.235 14.083 1.00 37.64 ? 14 DG B "C1'" 1
ATOM 271 N N9 . DG B 1 4 ? 2.681 -1.846 12.721 1.00 32.31 ? 14 DG B N9 1
ATOM 272 C C8 . DG B 1 4 ? 2.931 -3.198 12.386 1.00 31.22 ? 14 DG B C8 1
ATOM 273 N N7 . DG B 1 4 ? 2.871 -3.461 11.065 1.00 31.39 ? 14 DG B N7 1
ATOM 274 C C5 . DG B 1 4 ? 2.609 -2.209 10.518 1.00 27.56 ? 14 DG B C5 1
ATOM 275 C C6 . DG B 1 4 ? 2.409 -1.851 9.186 1.00 30.93 ? 14 DG B C6 1
ATOM 276 O O6 . DG B 1 4 ? 2.484 -2.619 8.218 1.00 29.91 ? 14 DG B O6 1
ATOM 277 N N1 . DG B 1 4 ? 2.067 -0.499 9.041 1.00 24.03 ? 14 DG B N1 1
ATOM 278 C C2 . DG B 1 4 ? 1.998 0.457 10.032 1.00 28.85 ? 14 DG B C2 1
ATOM 279 N N2 . DG B 1 4 ? 1.686 1.762 9.728 1.00 22.38 ? 14 DG B N2 1
ATOM 280 N N3 . DG B 1 4 ? 2.156 0.100 11.276 1.00 32.29 ? 14 DG B N3 1
ATOM 281 C C4 . DG B 1 4 ? 2.486 -1.221 11.472 1.00 27.61 ? 14 DG B C4 1
ATOM 282 P P . DT B 1 5 ? 1.433 -0.327 17.693 1.00 43.23 ? 15 DT B P 1
ATOM 283 O OP1 . DT B 1 5 ? 1.741 0.800 18.621 1.00 36.23 ? 15 DT B OP1 1
ATOM 284 O OP2 . DT B 1 5 ? 0.995 -1.677 18.077 1.00 28.46 ? 15 DT B OP2 1
ATOM 285 O "O5'" . DT B 1 5 ? 0.404 0.395 16.628 1.00 32.99 ? 15 DT B "O5'" 1
ATOM 286 C "C5'" . DT B 1 5 ? 0.609 1.825 16.423 1.00 34.10 ? 15 DT B "C5'" 1
ATOM 287 C "C4'" . DT B 1 5 ? -0.271 2.285 15.253 1.00 38.75 ? 15 DT B "C4'" 1
ATOM 288 O "O4'" . DT B 1 5 ? -0.042 1.486 14.074 1.00 39.14 ? 15 DT B "O4'" 1
ATOM 289 C "C3'" . DT B 1 5 ? -1.782 2.100 15.582 1.00 38.32 ? 15 DT B "C3'" 1
ATOM 290 O "O3'" . DT B 1 5 ? -2.343 3.456 15.795 1.00 42.31 ? 15 DT B "O3'" 1
ATOM 291 C "C2'" . DT B 1 5 ? -2.409 1.226 14.455 1.00 38.25 ? 15 DT B "C2'" 1
ATOM 292 C "C1'" . DT B 1 5 ? -1.257 1.153 13.405 1.00 36.16 ? 15 DT B "C1'" 1
ATOM 293 N N1 . DT B 1 5 ? -1.067 -0.129 12.503 1.00 35.82 ? 15 DT B N1 1
ATOM 294 C C2 . DT B 1 5 ? -1.246 0.013 11.067 1.00 38.99 ? 15 DT B C2 1
ATOM 295 O O2 . DT B 1 5 ? -1.448 1.072 10.477 1.00 32.20 ? 15 DT B O2 1
ATOM 296 N N3 . DT B 1 5 ? -1.170 -1.126 10.302 1.00 32.85 ? 15 DT B N3 1
ATOM 297 C C4 . DT B 1 5 ? -0.802 -2.357 10.795 1.00 41.14 ? 15 DT B C4 1
ATOM 298 O O4 . DT B 1 5 ? -0.672 -3.301 10.006 1.00 39.22 ? 15 DT B O4 1
ATOM 299 C C5 . DT B 1 5 ? -0.671 -2.447 12.273 1.00 39.24 ? 15 DT B C5 1
ATOM 300 C C7 . DT B 1 5 ? -0.380 -3.723 13.000 1.00 40.28 ? 15 DT B C7 1
ATOM 301 C C6 . DT B 1 5 ? -0.799 -1.359 13.023 1.00 32.11 ? 15 DT B C6 1
ATOM 302 P P . DA B 1 6 ? -3.717 3.605 16.653 1.00 47.76 ? 16 DA B P 1
ATOM 303 O OP1 . DA B 1 6 ? -3.764 5.020 17.153 1.00 45.25 ? 16 DA B OP1 1
ATOM 304 O OP2 . DA B 1 6 ? -4.002 2.468 17.562 1.00 40.57 ? 16 DA B OP2 1
ATOM 305 O "O5'" . DA B 1 6 ? -4.725 3.648 15.427 1.00 44.99 ? 16 DA B "O5'" 1
ATOM 306 C "C5'" . DA B 1 6 ? -4.659 4.680 14.400 1.00 46.48 ? 16 DA B "C5'" 1
ATOM 307 C "C4'" . DA B 1 6 ? -5.632 4.391 13.271 1.00 46.65 ? 16 DA B "C4'" 1
ATOM 308 O "O4'" . DA B 1 6 ? -5.258 3.225 12.460 1.00 45.28 ? 16 DA B "O4'" 1
ATOM 309 C "C3'" . DA B 1 6 ? -7.035 4.056 13.794 1.00 45.51 ? 16 DA B "C3'" 1
ATOM 310 O "O3'" . DA B 1 6 ? -8.040 4.356 12.895 1.00 45.85 ? 16 DA B "O3'" 1
ATOM 311 C "C2'" . DA B 1 6 ? -6.952 2.553 13.964 1.00 42.34 ? 16 DA B "C2'" 1
ATOM 312 C "C1'" . DA B 1 6 ? -6.246 2.194 12.658 1.00 43.18 ? 16 DA B "C1'" 1
ATOM 313 N N9 . DA B 1 6 ? -5.681 0.853 12.680 1.00 36.11 ? 16 DA B N9 1
ATOM 314 C C8 . DA B 1 6 ? -5.471 0.001 13.733 1.00 38.51 ? 16 DA B C8 1
ATOM 315 N N7 . DA B 1 6 ? -4.914 -1.139 13.410 1.00 38.27 ? 16 DA B N7 1
ATOM 316 C C5 . DA B 1 6 ? -4.801 -1.030 12.016 1.00 37.25 ? 16 DA B C5 1
ATOM 317 C C6 . DA B 1 6 ? -4.322 -1.856 11.016 1.00 35.70 ? 16 DA B C6 1
ATOM 318 N N6 . DA B 1 6 ? -3.821 -3.066 11.226 1.00 38.11 ? 16 DA B N6 1
ATOM 319 N N1 . DA B 1 6 ? -4.378 -1.393 9.765 1.00 35.31 ? 16 DA B N1 1
ATOM 320 C C2 . DA B 1 6 ? -4.886 -0.191 9.494 1.00 34.91 ? 16 DA B C2 1
ATOM 321 N N3 . DA B 1 6 ? -5.366 0.670 10.327 1.00 29.37 ? 16 DA B N3 1
ATOM 322 C C4 . DA B 1 6 ? -5.287 0.196 11.560 1.00 38.08 ? 16 DA B C4 1
ATOM 323 P P . DC B 1 7 ? -8.758 5.768 12.918 1.00 50.44 ? 17 DC B P 1
ATOM 324 O OP1 . DC B 1 7 ? -7.772 6.836 13.207 1.00 45.70 ? 17 DC B OP1 1
ATOM 325 O OP2 . DC B 1 7 ? -9.896 5.271 13.716 1.00 44.34 ? 17 DC B OP2 1
ATOM 326 O "O5'" . DC B 1 7 ? -9.180 5.985 11.398 1.00 49.22 ? 17 DC B "O5'" 1
ATOM 327 C "C5'" . DC B 1 7 ? -8.223 6.032 10.390 1.00 51.88 ? 17 DC B "C5'" 1
ATOM 328 C "C4'" . DC B 1 7 ? -8.663 5.164 9.209 1.00 51.01 ? 17 DC B "C4'" 1
ATOM 329 O "O4'" . DC B 1 7 ? -8.294 3.774 9.410 1.00 46.55 ? 17 DC B "O4'" 1
ATOM 330 C "C3'" . DC B 1 7 ? -10.168 5.124 8.847 1.00 51.41 ? 17 DC B "C3'" 1
ATOM 331 O "O3'" . DC B 1 7 ? -10.317 5.232 7.421 1.00 55.19 ? 17 DC B "O3'" 1
ATOM 332 C "C2'" . DC B 1 7 ? -10.625 3.737 9.269 1.00 49.35 ? 17 DC B "C2'" 1
ATOM 333 C "C1'" . DC B 1 7 ? -9.349 2.930 8.997 1.00 44.73 ? 17 DC B "C1'" 1
ATOM 334 N N1 . DC B 1 7 ? -9.166 1.699 9.775 1.00 42.42 ? 17 DC B N1 1
ATOM 335 C C2 . DC B 1 7 ? -8.731 0.523 9.164 1.00 40.41 ? 17 DC B C2 1
ATOM 336 O O2 . DC B 1 7 ? -8.463 0.412 7.954 1.00 40.54 ? 17 DC B O2 1
ATOM 337 N N3 . DC B 1 7 ? -8.574 -0.524 9.970 1.00 38.63 ? 17 DC B N3 1
ATOM 338 C C4 . DC B 1 7 ? -8.778 -0.500 11.289 1.00 31.06 ? 17 DC B C4 1
ATOM 339 N N4 . DC B 1 7 ? -8.549 -1.667 11.880 1.00 28.92 ? 17 DC B N4 1
ATOM 340 C C5 . DC B 1 7 ? -9.245 0.631 11.923 1.00 30.02 ? 17 DC B C5 1
ATOM 341 C C6 . DC B 1 7 ? -9.426 1.709 11.137 1.00 40.86 ? 17 DC B C6 1
ATOM 342 P P . DC B 1 8 ? -11.579 5.870 6.713 1.00 54.65 ? 18 DC B P 1
ATOM 343 O OP1 . DC B 1 8 ? -11.019 6.871 5.784 1.00 58.88 ? 18 DC B OP1 1
ATOM 344 O OP2 . DC B 1 8 ? -12.560 6.346 7.716 1.00 55.18 ? 18 DC B OP2 1
ATOM 345 O "O5'" . DC B 1 8 ? -12.197 4.672 5.851 1.00 50.39 ? 18 DC B "O5'" 1
ATOM 346 C "C5'" . DC B 1 8 ? -11.471 3.470 5.490 1.00 50.66 ? 18 DC B "C5'" 1
ATOM 347 C "C4'" . DC B 1 8 ? -12.438 2.337 5.202 1.00 45.57 ? 18 DC B "C4'" 1
ATOM 348 O "O4'" . DC B 1 8 ? -12.339 1.250 6.180 1.00 44.07 ? 18 DC B "O4'" 1
ATOM 349 C "C3'" . DC B 1 8 ? -13.951 2.702 5.211 1.00 47.37 ? 18 DC B "C3'" 1
ATOM 350 O "O3'" . DC B 1 8 ? -14.687 1.925 4.216 1.00 50.09 ? 18 DC B "O3'" 1
ATOM 351 C "C2'" . DC B 1 8 ? -14.413 2.378 6.636 1.00 41.98 ? 18 DC B "C2'" 1
ATOM 352 C "C1'" . DC B 1 8 ? -13.624 1.101 6.892 1.00 40.01 ? 18 DC B "C1'" 1
ATOM 353 N N1 . DC B 1 8 ? -13.317 0.779 8.340 1.00 33.68 ? 18 DC B N1 1
ATOM 354 C C2 . DC B 1 8 ? -12.862 -0.468 8.612 1.00 29.08 ? 18 DC B C2 1
ATOM 355 O O2 . DC B 1 8 ? -12.741 -1.244 7.671 1.00 28.12 ? 18 DC B O2 1
ATOM 356 N N3 . DC B 1 8 ? -12.549 -0.780 9.910 1.00 29.37 ? 18 DC B N3 1
ATOM 357 C C4 . DC B 1 8 ? -12.668 0.136 10.866 1.00 27.84 ? 18 DC B C4 1
ATOM 358 N N4 . DC B 1 8 ? -12.362 -0.168 12.101 1.00 26.12 ? 18 DC B N4 1
ATOM 359 C C5 . DC B 1 8 ? -13.176 1.404 10.610 1.00 28.82 ? 18 DC B C5 1
ATOM 360 C C6 . DC B 1 8 ? -13.496 1.662 9.343 1.00 31.19 ? 18 DC B C6 1
ATOM 361 P P . DG B 1 9 ? -14.972 2.535 2.731 1.00 55.23 ? 19 DG B P 1
ATOM 362 O OP1 . DG B 1 9 ? -13.640 2.876 2.150 1.00 53.70 ? 19 DG B OP1 1
ATOM 363 O OP2 . DG B 1 9 ? -16.105 3.486 3.050 1.00 48.56 ? 19 DG B OP2 1
ATOM 364 O "O5'" . DG B 1 9 ? -15.276 1.279 1.828 1.00 50.08 ? 19 DG B "O5'" 1
ATOM 365 C "C5'" . DG B 1 9 ? -14.305 0.276 1.865 1.00 49.62 ? 19 DG B "C5'" 1
ATOM 366 C "C4'" . DG B 1 9 ? -14.967 -1.082 1.920 1.00 52.86 ? 19 DG B "C4'" 1
ATOM 367 O "O4'" . DG B 1 9 ? -15.116 -1.679 3.271 1.00 49.95 ? 19 DG B "O4'" 1
ATOM 368 C "C3'" . DG B 1 9 ? -16.358 -1.162 1.355 1.00 52.95 ? 19 DG B "C3'" 1
ATOM 369 O "O3'" . DG B 1 9 ? -16.373 -2.538 0.910 1.00 61.92 ? 19 DG B "O3'" 1
ATOM 370 C "C2'" . DG B 1 9 ? -17.250 -0.876 2.569 1.00 50.01 ? 19 DG B "C2'" 1
ATOM 371 C "C1'" . DG B 1 9 ? -16.499 -1.677 3.669 1.00 45.90 ? 19 DG B "C1'" 1
ATOM 372 N N9 . DG B 1 9 ? -16.610 -1.232 5.069 1.00 33.77 ? 19 DG B N9 1
ATOM 373 C C8 . DG B 1 9 ? -17.282 -0.108 5.537 1.00 30.82 ? 19 DG B C8 1
ATOM 374 N N7 . DG B 1 9 ? -17.223 0.010 6.862 1.00 27.34 ? 19 DG B N7 1
ATOM 375 C C5 . DG B 1 9 ? -16.569 -1.180 7.239 1.00 29.01 ? 19 DG B C5 1
ATOM 376 C C6 . DG B 1 9 ? -16.229 -1.524 8.539 1.00 28.84 ? 19 DG B C6 1
ATOM 377 O O6 . DG B 1 9 ? -16.554 -0.716 9.506 1.00 30.43 ? 19 DG B O6 1
ATOM 378 N N1 . DG B 1 9 ? -15.447 -2.652 8.619 1.00 27.19 ? 19 DG B N1 1
ATOM 379 C C2 . DG B 1 9 ? -15.144 -3.453 7.529 1.00 30.02 ? 19 DG B C2 1
ATOM 380 N N2 . DG B 1 9 ? -14.462 -4.585 7.753 1.00 25.52 ? 19 DG B N2 1
ATOM 381 N N3 . DG B 1 9 ? -15.490 -3.132 6.270 1.00 27.96 ? 19 DG B N3 1
ATOM 382 C C4 . DG B 1 9 ? -16.135 -1.920 6.189 1.00 32.15 ? 19 DG B C4 1
ATOM 383 P P . DG B 1 10 ? -16.981 -2.976 -0.518 1.00 62.41 ? 20 DG B P 1
ATOM 384 O OP1 . DG B 1 10 ? -15.885 -2.568 -1.450 1.00 64.42 ? 20 DG B OP1 1
ATOM 385 O OP2 . DG B 1 10 ? -18.314 -2.282 -0.566 1.00 61.39 ? 20 DG B OP2 1
ATOM 386 O "O5'" . DG B 1 10 ? -17.160 -4.557 -0.266 1.00 55.30 ? 20 DG B "O5'" 1
ATOM 387 C "C5'" . DG B 1 10 ? -16.098 -5.472 -0.218 1.00 52.96 ? 20 DG B "C5'" 1
ATOM 388 C "C4'" . DG B 1 10 ? -16.371 -6.547 0.818 1.00 51.80 ? 20 DG B "C4'" 1
ATOM 389 O "O4'" . DG B 1 10 ? -16.714 -5.930 2.097 1.00 49.82 ? 20 DG B "O4'" 1
ATOM 390 C "C3'" . DG B 1 10 ? -17.504 -7.514 0.546 1.00 49.73 ? 20 DG B "C3'" 1
ATOM 391 O "O3'" . DG B 1 10 ? -17.097 -8.868 1.030 1.00 45.96 ? 20 DG B "O3'" 1
ATOM 392 C "C2'" . DG B 1 10 ? -18.684 -6.809 1.222 1.00 49.51 ? 20 DG B "C2'" 1
ATOM 393 C "C1'" . DG B 1 10 ? -18.043 -6.140 2.465 1.00 47.34 ? 20 DG B "C1'" 1
ATOM 394 N N9 . DG B 1 10 ? -18.628 -4.924 3.081 1.00 41.11 ? 20 DG B N9 1
ATOM 395 C C8 . DG B 1 10 ? -19.298 -3.822 2.637 1.00 42.08 ? 20 DG B C8 1
ATOM 396 N N7 . DG B 1 10 ? -19.677 -2.990 3.589 1.00 43.84 ? 20 DG B N7 1
ATOM 397 C C5 . DG B 1 10 ? -19.242 -3.554 4.789 1.00 40.33 ? 20 DG B C5 1
ATOM 398 C C6 . DG B 1 10 ? -19.315 -3.195 6.206 1.00 37.15 ? 20 DG B C6 1
ATOM 399 O O6 . DG B 1 10 ? -19.831 -2.225 6.783 1.00 33.63 ? 20 DG B O6 1
ATOM 400 N N1 . DG B 1 10 ? -18.689 -4.170 7.026 1.00 33.99 ? 20 DG B N1 1
ATOM 401 C C2 . DG B 1 10 ? -18.115 -5.300 6.529 1.00 35.08 ? 20 DG B C2 1
ATOM 402 N N2 . DG B 1 10 ? -17.510 -6.222 7.282 1.00 34.63 ? 20 DG B N2 1
ATOM 403 N N3 . DG B 1 10 ? -18.046 -5.578 5.259 1.00 41.41 ? 20 DG B N3 1
ATOM 404 C C4 . DG B 1 10 ? -18.598 -4.700 4.446 1.00 35.76 ? 20 DG B C4 1
HETATM 405 CA CA . CA C 2 . ? -12.120 -8.466 6.608 1.00 55.09 ? 102 CA A CA 1
HETATM 406 CA CA . CA D 2 . ? 10.387 1.408 12.182 1.00 44.69 ? 101 CA B CA 1
HETATM 407 O O . HOH E 3 . ? -12.712 -7.638 9.448 1.00 31.03 ? 103 HOH A O 1
HETATM 408 O O . HOH E 3 . ? -18.023 -1.354 15.351 1.00 36.54 ? 104 HOH A O 1
HETATM 409 O O . HOH E 3 . ? -18.225 -8.097 10.468 1.00 32.79 ? 105 HOH A O 1
HETATM 410 O O . HOH E 3 . ? -18.646 -10.100 12.865 1.00 42.50 ? 106 HOH A O 1
HETATM 411 O O . HOH E 3 . ? -6.292 -5.017 12.591 1.00 39.10 ? 107 HOH A O 1
HETATM 412 O O . HOH E 3 . ? -4.171 -11.022 2.637 1.00 55.79 ? 108 HOH A O 1
HETATM 413 O O . HOH E 3 . ? -6.153 -0.839 -2.969 1.00 39.52 ? 109 HOH A O 1
HETATM 414 O O . HOH E 3 . ? -0.059 -1.713 -0.073 0.50 33.26 ? 110 HOH A O 1
HETATM 415 O O . HOH E 3 . ? -6.508 1.759 -0.570 1.00 47.08 ? 111 HOH A O 1
HETATM 416 O O . HOH E 3 . ? -11.663 -3.782 4.735 1.00 38.30 ? 112 HOH A O 1
HETATM 417 O O . HOH E 3 . ? 0.358 4.509 -8.164 1.00 31.13 ? 113 HOH A O 1
HETATM 418 O O . HOH E 3 . ? -14.188 -9.390 7.893 1.00 38.12 ? 114 HOH A O 1
HETATM 419 O O . HOH E 3 . ? -11.316 -10.523 7.724 1.00 50.98 ? 115 HOH A O 1
HETATM 420 O O . HOH E 3 . ? -10.117 -7.172 6.944 1.00 43.81 ? 116 HOH A O 1
HETATM 421 O O . HOH E 3 . ? -8.903 -4.482 4.083 1.00 34.06 ? 117 HOH A O 1
HETATM 422 O O . HOH E 3 . ? -9.838 -6.765 2.758 1.00 38.95 ? 118 HOH A O 1
HETATM 423 O O . HOH F 3 . ? 8.543 0.302 13.280 1.00 19.73 ? 102 HOH B O 1
HETATM 424 O O . HOH F 3 . ? -12.790 -6.101 5.161 1.00 45.68 ? 103 HOH B O 1
HETATM 425 O O . HOH F 3 . ? 11.486 1.077 9.700 1.00 25.93 ? 104 HOH B O 1
HETATM 426 O O . HOH F 3 . ? 10.843 4.363 13.435 1.00 46.64 ? 105 HOH B O 1
HETATM 427 O O . HOH F 3 . ? 3.977 3.459 12.372 1.00 49.01 ? 106 HOH B O 1
HETATM 428 O O . HOH F 3 . ? 3.399 0.106 20.696 1.00 41.86 ? 107 HOH B O 1
HETATM 429 O O . HOH F 3 . ? 1.839 -3.896 17.899 1.00 41.79 ? 108 HOH B O 1
HETATM 430 O O . HOH F 3 . ? -17.382 1.652 10.289 1.00 45.07 ? 109 HOH B O 1
HETATM 431 O O . HOH F 3 . ? 11.100 1.782 14.686 1.00 42.03 ? 110 HOH B O 1
HETATM 432 O O . HOH F 3 . ? 13.594 2.363 8.862 1.00 31.04 ? 111 HOH B O 1
HETATM 433 O O . HOH F 3 . ? 4.377 6.130 10.534 1.00 37.15 ? 112 HOH B O 1
HETATM 434 O O . HOH F 3 . ? -18.874 4.300 10.574 1.00 43.23 ? 113 HOH B O 1
HETATM 435 O O . HOH F 3 . ? -12.524 -1.670 4.884 1.00 38.55 ? 114 HOH B O 1
HETATM 436 O O . HOH F 3 . ? 1.652 6.958 11.043 1.00 41.69 ? 115 HOH B O 1
HETATM 437 O O . HOH F 3 . ? -17.691 6.382 9.922 1.00 45.82 ? 116 HOH B O 1
HETATM 438 O O . HOH F 3 . ? 15.656 0.242 8.043 1.00 41.75 ? 117 HOH B O 1
HETATM 439 O O . HOH F 3 . ? 8.273 2.465 12.799 1.00 31.55 ? 118 HOH B O 1
HETATM 440 O O . HOH F 3 . ? 8.540 0.207 10.862 1.00 25.00 ? 119 HOH B O 1
HETATM 441 O O . HOH F 3 . ? 8.626 -7.114 14.562 1.00 38.91 ? 120 HOH B O 1
HETATM 442 O O . HOH F 3 . ? -2.162 2.037 20.254 1.00 52.79 ? 121 HOH B O 1
HETATM 443 O O . HOH F 3 . ? -13.086 6.247 2.829 1.00 50.89 ? 122 HOH B O 1
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