data_1K9G
#
_entry.id 1K9G
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.386
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1K9G pdb_00001k9g 10.2210/pdb1k9g/pdb
NDB DD0047 ? ?
RCSB RCSB014726 ? ?
WWPDB D_1000014726 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2001-11-30
2 'Structure model' 1 1 2008-04-27
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 4 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' diffrn_source
5 4 'Structure model' software
6 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site'
4 4 'Structure model' '_software.classification'
5 4 'Structure model' '_software.name'
6 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
7 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
8 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1K9G
_pdbx_database_status.recvd_initial_deposition_date 2001-10-29
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Lisgarten, J.N.' 1
'Coll, M.' 2
'Portugal, J.' 3
'Wright, C.W.' 4
'Aymami, J.' 5
#
_citation.id primary
_citation.title
'The antimalarial and cytotoxic drug cryptolepine intercalates into DNA at cytosine-cytosine sites.'
_citation.journal_abbrev Nat.Struct.Biol.
_citation.journal_volume 9
_citation.page_first 57
_citation.page_last 60
_citation.year 2002
_citation.journal_id_ASTM NSBIEW
_citation.country US
_citation.journal_id_ISSN 1072-8368
_citation.journal_id_CSD 2024
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 11731803
_citation.pdbx_database_id_DOI 10.1038/nsb729
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Lisgarten, J.N.' 1 ?
primary 'Coll, M.' 2 ?
primary 'Portugal, J.' 3 ?
primary 'Wright, C.W.' 4 ?
primary 'Aymami, J.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*CP*CP*TP*AP*GP*G)-3'" 1809.217 1 ? ? ? ?
2 non-polymer syn '5-METHYL-5H-INDOLO[3,2-B]QUINOLINE' 232.280 2 ? ? ? ?
3 water nat water 18.015 37 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DT)(DA)(DG)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CCTAGG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 '5-METHYL-5H-INDOLO[3,2-B]QUINOLINE' DR1
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DC n
1 3 DT n
1 4 DA n
1 5 DG n
1 6 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DR1 non-polymer . '5-METHYL-5H-INDOLO[3,2-B]QUINOLINE' CRYPTOLEPINE 'C16 H12 N2' 232.280
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC CYT A . n
A 1 2 DC 2 2 2 DC CYT A . n
A 1 3 DT 3 3 3 DT THY A . n
A 1 4 DA 4 4 4 DA ADE A . n
A 1 5 DG 5 5 5 DG GUA A . n
A 1 6 DG 6 6 6 DG GUA A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DR1 1 7 7 DR1 DR1 A .
C 2 DR1 1 8 8 DR1 DR1 A .
D 3 HOH 1 3001 3001 HOH HOH A .
D 3 HOH 2 3002 3002 HOH HOH A .
D 3 HOH 3 3003 3003 HOH HOH A .
D 3 HOH 4 3004 3004 HOH HOH A .
D 3 HOH 5 3005 3005 HOH HOH A .
D 3 HOH 6 3006 3006 HOH HOH A .
D 3 HOH 7 3007 3007 HOH HOH A .
D 3 HOH 8 3008 3008 HOH HOH A .
D 3 HOH 9 3009 3009 HOH HOH A .
D 3 HOH 10 3010 3010 HOH HOH A .
D 3 HOH 11 3011 3011 HOH HOH A .
D 3 HOH 12 3012 3012 HOH HOH A .
D 3 HOH 13 3013 3013 HOH HOH A .
D 3 HOH 14 3014 3014 HOH HOH A .
D 3 HOH 15 3015 3015 HOH HOH A .
D 3 HOH 16 3016 3016 HOH HOH A .
D 3 HOH 17 3017 3017 HOH HOH A .
D 3 HOH 18 3018 3018 HOH HOH A .
D 3 HOH 19 3019 3019 HOH HOH A .
D 3 HOH 20 3020 3020 HOH HOH A .
D 3 HOH 21 3021 3021 HOH HOH A .
D 3 HOH 22 3022 3022 HOH HOH A .
D 3 HOH 23 3023 3023 HOH HOH A .
D 3 HOH 24 3026 3026 HOH HOH A .
D 3 HOH 25 3027 3027 HOH HOH A .
D 3 HOH 26 3028 3028 HOH HOH A .
D 3 HOH 27 3029 3029 HOH HOH A .
D 3 HOH 28 3030 3030 HOH HOH A .
D 3 HOH 29 3031 3031 HOH HOH A .
D 3 HOH 30 3032 3032 HOH HOH A .
D 3 HOH 31 3033 3033 HOH HOH A .
D 3 HOH 32 3034 3034 HOH HOH A .
D 3 HOH 33 3035 3035 HOH HOH A .
D 3 HOH 34 3036 3036 HOH HOH A .
D 3 HOH 35 3037 3037 HOH HOH A .
D 3 HOH 36 3038 3038 HOH HOH A .
D 3 HOH 37 3039 3039 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
AMoRE phasing . ? 1
SHELXL-97 refinement . ? 2
MAR345 'data collection' . ? 3
SCALEPACK 'data scaling' . ? 4
#
_cell.entry_id 1K9G
_cell.length_a 29.960
_cell.length_b 29.960
_cell.length_c 39.650
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1K9G
_symmetry.space_group_name_H-M 'P 64'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 172
#
_exptl.entry_id 1K9G
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.72
_exptl_crystal.density_percent_sol 54.76
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pdbx_details
'Magnesium acetate, MES, Ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 120
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type MARRESEARCH
_diffrn_detector.pdbx_collection_date 2000-05-26
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.1
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7A'
_diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG'
_diffrn_source.pdbx_synchrotron_beamline BW7A
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.1
#
_reflns.entry_id 1K9G
_reflns.observed_criterion_sigma_I 1
_reflns.observed_criterion_sigma_F 2
_reflns.d_resolution_low 20
_reflns.d_resolution_high 1.4
_reflns.number_obs 3356
_reflns.number_all 3543
_reflns.percent_possible_obs 87.3
_reflns.pdbx_Rmerge_I_obs 0.0380000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 29.1
_reflns.B_iso_Wilson_estimate 17.7
_reflns.pdbx_redundancy ?
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.4
_reflns_shell.d_res_low 1.45
_reflns_shell.percent_possible_all 73.2
_reflns_shell.Rmerge_I_obs 0.3300000
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 2.4
_reflns_shell.pdbx_redundancy ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 292
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1K9G
_refine.ls_number_reflns_obs 3356
_refine.ls_number_reflns_all 3356
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_d_res_low 10.
_refine.ls_d_res_high 1.4
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.2090000
_refine.ls_R_factor_all 0.2090000
_refine.ls_R_factor_R_work 0.2080000
_refine.ls_R_factor_R_free 0.2270000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free 167
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 120
_refine_hist.pdbx_number_atoms_ligand 36
_refine_hist.number_atoms_solvent 37
_refine_hist.number_atoms_total 193
_refine_hist.d_res_high 1.4
_refine_hist.d_res_low 10.
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
s_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ?
s_angle_d 0.023 ? ? ? 'X-RAY DIFFRACTION' ?
#
_pdbx_refine.entry_id 1K9G
_pdbx_refine.R_factor_all_no_cutoff 0.2090000
_pdbx_refine.R_factor_obs_no_cutoff 0.2080000
_pdbx_refine.free_R_factor_no_cutoff 0.2270000
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ?
_pdbx_refine.free_R_val_test_set_ct_no_cutoff 167
_pdbx_refine.R_factor_all_4sig_cutoff ?
_pdbx_refine.R_factor_obs_4sig_cutoff ?
_pdbx_refine.free_R_factor_4sig_cutoff ?
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ?
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ?
_pdbx_refine.number_reflns_obs_4sig_cutoff ?
_pdbx_refine.number_reflns_obs_no_cutoff ?
_pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine.free_R_error_no_cutoff ?
#
_database_PDB_matrix.entry_id 1K9G
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1K9G
_struct.title 'Crystal Structure of the Complex of Cryptolepine-d(CCTAGG)2'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1K9G
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA intercalator complex, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1K9G
_struct_ref.pdbx_db_accession 1K9G
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1K9G
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 1K9G
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 4_675 -x+1,-y+2,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 51.8922421948 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.details 'The double helix is generated by the operation -x,-y+2,z.'
_struct_biol.pdbx_parent_biol_id ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 1 A DG 6 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 1 A DG 6 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 1 A DG 6 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 2 A DG 5 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 2 A DG 5 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 2 A DG 5 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 3 A DA 4 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 3 A DA 4 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 3 N3 ? ? A DA 4 A DT 3 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 3 O4 ? ? A DA 4 A DT 3 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 5 A DC 2 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 5 A DC 2 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 5 A DC 2 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 6 A DC 1 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 6 A DC 1 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 6 A DC 1 4_675 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A DR1 7 ? 4 'BINDING SITE FOR RESIDUE DR1 A 7'
AC2 Software A DR1 8 ? 6 'BINDING SITE FOR RESIDUE DR1 A 8'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 4 DC A 1 ? DC A 1 . ? 1_555 ?
2 AC1 4 DC A 2 ? DC A 2 . ? 1_555 ?
3 AC1 4 DG A 5 ? DG A 5 . ? 4_675 ?
4 AC1 4 DG A 6 ? DG A 6 . ? 4_675 ?
5 AC2 6 DC A 1 ? DC A 1 . ? 1_555 ?
6 AC2 6 DC A 1 ? DC A 1 . ? 4_665 ?
7 AC2 6 DG A 6 ? DG A 6 . ? 4_675 ?
8 AC2 6 DG A 6 ? DG A 6 . ? 1_545 ?
9 AC2 6 HOH D . ? HOH A 3015 . ? 4_675 ?
10 AC2 6 HOH D . ? HOH A 3015 . ? 1_545 ?
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O A HOH 3018 ? ? O A HOH 3030 ? ? 1.99
2 1 O A HOH 3010 ? ? O A HOH 3012 ? ? 2.03
3 1 "C5'" A DT 3 ? ? O A HOH 3038 ? ? 2.13
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 3026
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 3029
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 3_564
_pdbx_validate_symm_contact.dist 2.12
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 103.36 108.00 -4.64 0.70 N
2 1 C2 A DC 2 ? ? N3 A DC 2 ? ? C4 A DC 2 ? ? 123.56 119.90 3.66 0.50 N
3 1 C5 A DC 2 ? ? C6 A DC 2 ? ? N1 A DC 2 ? ? 124.12 121.00 3.12 0.50 N
4 1 "C3'" A DT 3 ? ? "C2'" A DT 3 ? ? "C1'" A DT 3 ? ? 97.04 102.40 -5.36 0.80 N
5 1 C4 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 114.77 119.00 -4.23 0.60 N
6 1 "C3'" A DT 3 ? ? "O3'" A DT 3 ? ? P A DA 4 ? ? 127.99 119.70 8.29 1.20 Y
7 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 103.04 108.00 -4.96 0.70 N
8 1 N1 A DA 4 ? ? C2 A DA 4 ? ? N3 A DA 4 ? ? 124.69 129.30 -4.61 0.50 N
9 1 P A DG 6 ? ? "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? 131.02 120.90 10.12 1.60 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DR1 C1 C Y N 108
DR1 C2 C Y N 109
DR1 C3 C Y N 110
DR1 C4 C Y N 111
DR1 C5 C Y N 112
DR1 C6 C Y N 113
DR1 C7 C Y N 114
DR1 N8 N Y N 115
DR1 C9 C Y N 116
DR1 C10 C Y N 117
DR1 C11 C Y N 118
DR1 C12 C Y N 119
DR1 C13 C Y N 120
DR1 C14 C Y N 121
DR1 C15 C Y N 122
DR1 N16 N Y N 123
DR1 C17 C Y N 124
DR1 C18 C N N 125
DR1 HC1 H N N 126
DR1 HC2 H N N 127
DR1 HC3 H N N 128
DR1 HC4 H N N 129
DR1 HC6 H N N 130
DR1 H10 H N N 131
DR1 H11 H N N 132
DR1 H12 H N N 133
DR1 H13 H N N 134
DR1 H181 H N N 135
DR1 H182 H N N 136
DR1 H183 H N N 137
DT OP3 O N N 138
DT P P N N 139
DT OP1 O N N 140
DT OP2 O N N 141
DT "O5'" O N N 142
DT "C5'" C N N 143
DT "C4'" C N R 144
DT "O4'" O N N 145
DT "C3'" C N S 146
DT "O3'" O N N 147
DT "C2'" C N N 148
DT "C1'" C N R 149
DT N1 N N N 150
DT C2 C N N 151
DT O2 O N N 152
DT N3 N N N 153
DT C4 C N N 154
DT O4 O N N 155
DT C5 C N N 156
DT C7 C N N 157
DT C6 C N N 158
DT HOP3 H N N 159
DT HOP2 H N N 160
DT "H5'" H N N 161
DT "H5''" H N N 162
DT "H4'" H N N 163
DT "H3'" H N N 164
DT "HO3'" H N N 165
DT "H2'" H N N 166
DT "H2''" H N N 167
DT "H1'" H N N 168
DT H3 H N N 169
DT H71 H N N 170
DT H72 H N N 171
DT H73 H N N 172
DT H6 H N N 173
HOH O O N N 174
HOH H1 H N N 175
HOH H2 H N N 176
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DR1 C1 C2 doub Y N 113
DR1 C1 C17 sing Y N 114
DR1 C1 HC1 sing N N 115
DR1 C2 C3 sing Y N 116
DR1 C2 HC2 sing N N 117
DR1 C3 C4 doub Y N 118
DR1 C3 HC3 sing N N 119
DR1 C4 C5 sing Y N 120
DR1 C4 HC4 sing N N 121
DR1 C5 C6 sing Y N 122
DR1 C5 C17 doub Y N 123
DR1 C6 C7 doub Y N 124
DR1 C6 HC6 sing N N 125
DR1 C7 N8 sing Y N 126
DR1 C7 C15 sing Y N 127
DR1 N8 C9 doub Y N 128
DR1 C9 C10 sing Y N 129
DR1 C9 C14 sing Y N 130
DR1 C10 C11 doub Y N 131
DR1 C10 H10 sing N N 132
DR1 C11 C12 sing Y N 133
DR1 C11 H11 sing N N 134
DR1 C12 C13 doub Y N 135
DR1 C12 H12 sing N N 136
DR1 C13 C14 sing Y N 137
DR1 C13 H13 sing N N 138
DR1 C14 C15 doub Y N 139
DR1 C15 N16 sing Y N 140
DR1 N16 C17 sing Y N 141
DR1 N16 C18 sing N N 142
DR1 C18 H181 sing N N 143
DR1 C18 H182 sing N N 144
DR1 C18 H183 sing N N 145
DT OP3 P sing N N 146
DT OP3 HOP3 sing N N 147
DT P OP1 doub N N 148
DT P OP2 sing N N 149
DT P "O5'" sing N N 150
DT OP2 HOP2 sing N N 151
DT "O5'" "C5'" sing N N 152
DT "C5'" "C4'" sing N N 153
DT "C5'" "H5'" sing N N 154
DT "C5'" "H5''" sing N N 155
DT "C4'" "O4'" sing N N 156
DT "C4'" "C3'" sing N N 157
DT "C4'" "H4'" sing N N 158
DT "O4'" "C1'" sing N N 159
DT "C3'" "O3'" sing N N 160
DT "C3'" "C2'" sing N N 161
DT "C3'" "H3'" sing N N 162
DT "O3'" "HO3'" sing N N 163
DT "C2'" "C1'" sing N N 164
DT "C2'" "H2'" sing N N 165
DT "C2'" "H2''" sing N N 166
DT "C1'" N1 sing N N 167
DT "C1'" "H1'" sing N N 168
DT N1 C2 sing N N 169
DT N1 C6 sing N N 170
DT C2 O2 doub N N 171
DT C2 N3 sing N N 172
DT N3 C4 sing N N 173
DT N3 H3 sing N N 174
DT C4 O4 doub N N 175
DT C4 C5 sing N N 176
DT C5 C7 sing N N 177
DT C5 C6 doub N N 178
DT C7 H71 sing N N 179
DT C7 H72 sing N N 180
DT C7 H73 sing N N 181
DT C6 H6 sing N N 182
HOH O H1 sing N N 183
HOH O H2 sing N N 184
#
_ndb_struct_conf_na.entry_id 1K9G
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 A DG 6 4_675 0.186 -0.190 0.119 1.602 -10.972 -0.939 1 A_DC1:DG6_A A 1 ? A 6 ? 19 1
1 A DC 2 1_555 A DG 5 4_675 0.159 -0.140 0.409 -9.873 -1.689 -1.057 2 A_DC2:DG5_A A 2 ? A 5 ? 19 1
1 A DT 3 1_555 A DA 4 4_675 -0.050 -0.202 -0.003 3.578 -12.349 -1.593 3 A_DT3:DA4_A A 3 ? A 4 ? 20 1
1 A DA 4 1_555 A DT 3 4_675 0.050 -0.202 -0.003 -3.578 -12.349 -1.593 4 A_DA4:DT3_A A 4 ? A 3 ? 20 1
1 A DG 5 1_555 A DC 2 4_675 -0.159 -0.140 0.409 9.873 -1.689 -1.057 5 A_DG5:DC2_A A 5 ? A 2 ? 19 1
1 A DG 6 1_555 A DC 1 4_675 -0.186 -0.190 0.119 -1.602 -10.972 -0.939 6 A_DG6:DC1_A A 6 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 A DG 6 4_675 A DC 2 1_555 A DG 5 4_675 0.113 0.397 6.943 -1.938 0.619 23.982 0.529 -1.592 6.920 1.485 4.654
24.066 1 AA_DC1DC2:DG5DG6_AA A 1 ? A 6 ? A 2 ? A 5 ?
1 A DC 2 1_555 A DG 5 4_675 A DT 3 1_555 A DA 4 4_675 -0.468 0.112 2.977 3.812 3.923 26.960 -0.633 1.829 2.872 8.306 -8.072
27.500 2 AA_DC2DT3:DA4DG5_AA A 2 ? A 5 ? A 3 ? A 4 ?
1 A DT 3 1_555 A DA 4 4_675 A DA 4 1_555 A DT 3 4_675 0.000 1.853 3.357 0.000 -3.668 50.822 2.412 0.000 3.225 -4.267 0.000
50.945 3 AA_DT3DA4:DT3DA4_AA A 3 ? A 4 ? A 4 ? A 3 ?
1 A DA 4 1_555 A DT 3 4_675 A DG 5 1_555 A DC 2 4_675 0.468 0.112 2.977 -3.812 3.923 26.960 -0.633 -1.829 2.872 8.306 8.072
27.500 4 AA_DA4DG5:DC2DT3_AA A 4 ? A 3 ? A 5 ? A 2 ?
1 A DG 5 1_555 A DC 2 4_675 A DG 6 1_555 A DC 1 4_675 -0.113 0.397 6.943 1.938 0.619 23.982 0.529 1.592 6.920 1.485 -4.654
24.066 5 AA_DG5DG6:DC1DC2_AA A 5 ? A 2 ? A 6 ? A 1 ?
#
_atom_sites.entry_id 1K9G
_atom_sites.fract_transf_matrix[1][1] 0.033378
_atom_sites.fract_transf_matrix[1][2] 0.019271
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.038541
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.025221
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 5.286 15.334 -8.558 1.00 11.47 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 4.364 14.254 -8.688 1.00 11.29 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 3.497 14.146 -7.469 1.00 12.66 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 4.319 13.900 -6.295 1.00 11.71 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 2.681 15.411 -7.154 1.00 13.42 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 1.458 15.341 -7.895 1.00 12.69 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 2.537 15.354 -5.683 1.00 14.07 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 3.720 14.565 -5.166 1.00 13.72 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 4.843 15.316 -4.578 1.00 10.68 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 5.011 15.347 -3.206 1.00 12.89 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 4.185 14.728 -2.530 1.00 14.45 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 6.026 16.024 -2.672 1.00 10.15 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 6.899 16.681 -3.435 1.00 11.76 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 7.892 17.340 -2.854 1.00 9.96 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 6.772 16.682 -4.867 1.00 12.96 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 5.744 15.995 -5.377 1.00 11.84 ? 1 DC A C6 1
ATOM 17 P P . DC A 1 2 ? 0.607 16.675 -8.215 1.00 20.79 ? 2 DC A P 1
ATOM 18 O OP1 . DC A 1 2 ? -0.312 16.388 -9.355 1.00 21.07 ? 2 DC A OP1 1
ATOM 19 O OP2 . DC A 1 2 ? 1.482 17.852 -8.214 1.00 20.58 ? 2 DC A OP2 1
ATOM 20 O "O5'" . DC A 1 2 ? -0.289 16.681 -6.880 1.00 19.94 ? 2 DC A "O5'" 1
ATOM 21 C "C5'" . DC A 1 2 ? -1.161 17.803 -6.672 1.00 24.47 ? 2 DC A "C5'" 1
ATOM 22 C "C4'" . DC A 1 2 ? -1.666 17.754 -5.251 1.00 27.01 ? 2 DC A "C4'" 1
ATOM 23 O "O4'" . DC A 1 2 ? -0.663 18.210 -4.341 1.00 26.59 ? 2 DC A "O4'" 1
ATOM 24 C "C3'" . DC A 1 2 ? -2.871 18.662 -5.000 1.00 27.98 ? 2 DC A "C3'" 1
ATOM 25 O "O3'" . DC A 1 2 ? -3.739 17.974 -4.116 1.00 19.51 ? 2 DC A "O3'" 1
ATOM 26 C "C2'" . DC A 1 2 ? -2.251 19.920 -4.451 1.00 23.87 ? 2 DC A "C2'" 1
ATOM 27 C "C1'" . DC A 1 2 ? -1.026 19.443 -3.714 1.00 18.98 ? 2 DC A "C1'" 1
ATOM 28 N N1 . DC A 1 2 ? 0.208 20.263 -3.776 1.00 17.70 ? 2 DC A N1 1
ATOM 29 C C2 . DC A 1 2 ? 0.744 20.739 -2.554 1.00 14.24 ? 2 DC A C2 1
ATOM 30 O O2 . DC A 1 2 ? 0.127 20.425 -1.523 1.00 17.45 ? 2 DC A O2 1
ATOM 31 N N3 . DC A 1 2 ? 1.858 21.479 -2.605 1.00 15.67 ? 2 DC A N3 1
ATOM 32 C C4 . DC A 1 2 ? 2.482 21.789 -3.735 1.00 22.37 ? 2 DC A C4 1
ATOM 33 N N4 . DC A 1 2 ? 3.594 22.536 -3.705 1.00 16.31 ? 2 DC A N4 1
ATOM 34 C C5 . DC A 1 2 ? 1.968 21.325 -4.990 1.00 30.88 ? 2 DC A C5 1
ATOM 35 C C6 . DC A 1 2 ? 0.850 20.582 -4.930 1.00 28.89 ? 2 DC A C6 1
ATOM 36 P P . DT A 1 3 ? -5.238 18.552 -3.885 1.00 24.91 ? 3 DT A P 1
ATOM 37 O OP1 . DT A 1 3 ? -6.087 17.462 -3.352 1.00 32.22 ? 3 DT A OP1 1
ATOM 38 O OP2 . DT A 1 3 ? -5.648 19.370 -5.038 1.00 28.64 ? 3 DT A OP2 1
ATOM 39 O "O5'" . DT A 1 3 ? -4.948 19.560 -2.650 1.00 22.35 ? 3 DT A "O5'" 1
ATOM 40 C "C5'" . DT A 1 3 ? -4.642 18.982 -1.370 1.00 22.08 ? 3 DT A "C5'" 1
ATOM 41 C "C4'" . DT A 1 3 ? -4.557 20.134 -0.394 1.00 21.06 ? 3 DT A "C4'" 1
ATOM 42 O "O4'" . DT A 1 3 ? -3.355 20.900 -0.624 1.00 20.15 ? 3 DT A "O4'" 1
ATOM 43 C "C3'" . DT A 1 3 ? -5.656 21.179 -0.502 1.00 18.90 ? 3 DT A "C3'" 1
ATOM 44 O "O3'" . DT A 1 3 ? -5.937 21.721 0.752 1.00 22.00 ? 3 DT A "O3'" 1
ATOM 45 C "C2'" . DT A 1 3 ? -5.076 22.268 -1.391 1.00 23.36 ? 3 DT A "C2'" 1
ATOM 46 C "C1'" . DT A 1 3 ? -3.684 22.298 -0.766 1.00 19.79 ? 3 DT A "C1'" 1
ATOM 47 N N1 . DT A 1 3 ? -2.565 22.903 -1.511 1.00 21.23 ? 3 DT A N1 1
ATOM 48 C C2 . DT A 1 3 ? -1.496 23.351 -0.759 1.00 15.47 ? 3 DT A C2 1
ATOM 49 O O2 . DT A 1 3 ? -1.447 23.267 0.461 1.00 18.46 ? 3 DT A O2 1
ATOM 50 N N3 . DT A 1 3 ? -0.488 23.900 -1.480 1.00 13.69 ? 3 DT A N3 1
ATOM 51 C C4 . DT A 1 3 ? -0.400 24.061 -2.840 1.00 12.99 ? 3 DT A C4 1
ATOM 52 O O4 . DT A 1 3 ? 0.580 24.576 -3.331 1.00 19.86 ? 3 DT A O4 1
ATOM 53 C C5 . DT A 1 3 ? -1.550 23.571 -3.567 1.00 16.74 ? 3 DT A C5 1
ATOM 54 C C7 . DT A 1 3 ? -1.471 23.740 -5.060 1.00 26.96 ? 3 DT A C7 1
ATOM 55 C C6 . DT A 1 3 ? -2.556 23.028 -2.888 1.00 17.53 ? 3 DT A C6 1
ATOM 56 P P . DA A 1 4 ? -7.334 21.766 1.507 1.00 23.84 ? 4 DA A P 1
ATOM 57 O OP1 . DA A 1 4 ? -7.804 20.397 1.799 1.00 26.35 ? 4 DA A OP1 1
ATOM 58 O OP2 . DA A 1 4 ? -8.210 22.765 0.854 1.00 21.20 ? 4 DA A OP2 1
ATOM 59 O "O5'" . DA A 1 4 ? -6.890 22.414 2.922 1.00 23.33 ? 4 DA A "O5'" 1
ATOM 60 C "C5'" . DA A 1 4 ? -5.878 21.764 3.693 1.00 24.73 ? 4 DA A "C5'" 1
ATOM 61 C "C4'" . DA A 1 4 ? -5.235 22.845 4.536 1.00 21.11 ? 4 DA A "C4'" 1
ATOM 62 O "O4'" . DA A 1 4 ? -4.313 23.620 3.731 1.00 18.05 ? 4 DA A "O4'" 1
ATOM 63 C "C3'" . DA A 1 4 ? -6.210 23.852 5.123 1.00 18.06 ? 4 DA A "C3'" 1
ATOM 64 O "O3'" . DA A 1 4 ? -5.722 24.263 6.373 1.00 15.24 ? 4 DA A "O3'" 1
ATOM 65 C "C2'" . DA A 1 4 ? -6.218 24.972 4.104 1.00 19.69 ? 4 DA A "C2'" 1
ATOM 66 C "C1'" . DA A 1 4 ? -4.789 24.972 3.626 1.00 15.25 ? 4 DA A "C1'" 1
ATOM 67 N N9 . DA A 1 4 ? -4.561 25.296 2.204 1.00 15.36 ? 4 DA A N9 1
ATOM 68 C C8 . DA A 1 4 ? -5.463 25.059 1.187 1.00 17.12 ? 4 DA A C8 1
ATOM 69 N N7 . DA A 1 4 ? -5.003 25.443 0.028 1.00 16.28 ? 4 DA A N7 1
ATOM 70 C C5 . DA A 1 4 ? -3.748 25.954 0.263 1.00 14.82 ? 4 DA A C5 1
ATOM 71 C C6 . DA A 1 4 ? -2.764 26.515 -0.565 1.00 14.95 ? 4 DA A C6 1
ATOM 72 N N6 . DA A 1 4 ? -2.936 26.648 -1.894 1.00 16.33 ? 4 DA A N6 1
ATOM 73 N N1 . DA A 1 4 ? -1.627 26.922 0.013 1.00 11.94 ? 4 DA A N1 1
ATOM 74 C C2 . DA A 1 4 ? -1.421 26.801 1.352 1.00 10.89 ? 4 DA A C2 1
ATOM 75 N N3 . DA A 1 4 ? -2.300 26.282 2.212 1.00 11.29 ? 4 DA A N3 1
ATOM 76 C C4 . DA A 1 4 ? -3.439 25.876 1.622 1.00 11.05 ? 4 DA A C4 1
ATOM 77 P P . DG A 1 5 ? -6.472 25.286 7.345 1.00 14.97 ? 5 DG A P 1
ATOM 78 O OP1 . DG A 1 5 ? -6.156 24.921 8.745 1.00 15.25 ? 5 DG A OP1 1
ATOM 79 O OP2 . DG A 1 5 ? -7.912 25.341 6.926 1.00 20.20 ? 5 DG A OP2 1
ATOM 80 O "O5'" . DG A 1 5 ? -5.792 26.671 6.958 1.00 13.50 ? 5 DG A "O5'" 1
ATOM 81 C "C5'" . DG A 1 5 ? -4.371 26.823 7.223 1.00 14.66 ? 5 DG A "C5'" 1
ATOM 82 C "C4'" . DG A 1 5 ? -3.965 28.182 6.702 1.00 11.79 ? 5 DG A "C4'" 1
ATOM 83 O "O4'" . DG A 1 5 ? -3.944 28.165 5.259 1.00 11.83 ? 5 DG A "O4'" 1
ATOM 84 C "C3'" . DG A 1 5 ? -4.919 29.309 7.074 1.00 13.56 ? 5 DG A "C3'" 1
ATOM 85 O "O3'" . DG A 1 5 ? -4.188 30.434 7.475 1.00 14.47 ? 5 DG A "O3'" 1
ATOM 86 C "C2'" . DG A 1 5 ? -5.701 29.590 5.802 1.00 13.04 ? 5 DG A "C2'" 1
ATOM 87 C "C1'" . DG A 1 5 ? -4.592 29.379 4.796 1.00 11.35 ? 5 DG A "C1'" 1
ATOM 88 N N9 . DG A 1 5 ? -4.966 29.133 3.405 1.00 13.37 ? 5 DG A N9 1
ATOM 89 C C8 . DG A 1 5 ? -6.113 28.543 2.921 1.00 12.34 ? 5 DG A C8 1
ATOM 90 N N7 . DG A 1 5 ? -6.135 28.475 1.615 1.00 16.40 ? 5 DG A N7 1
ATOM 91 C C5 . DG A 1 5 ? -4.938 29.052 1.223 1.00 14.18 ? 5 DG A C5 1
ATOM 92 C C6 . DG A 1 5 ? -4.377 29.275 -0.071 1.00 9.92 ? 5 DG A C6 1
ATOM 93 O O6 . DG A 1 5 ? -4.891 28.973 -1.146 1.00 17.24 ? 5 DG A O6 1
ATOM 94 N N1 . DG A 1 5 ? -3.128 29.897 -0.034 1.00 13.30 ? 5 DG A N1 1
ATOM 95 C C2 . DG A 1 5 ? -2.481 30.268 1.117 1.00 13.73 ? 5 DG A C2 1
ATOM 96 N N2 . DG A 1 5 ? -1.293 30.852 0.973 1.00 13.40 ? 5 DG A N2 1
ATOM 97 N N3 . DG A 1 5 ? -2.990 30.068 2.334 1.00 12.79 ? 5 DG A N3 1
ATOM 98 C C4 . DG A 1 5 ? -4.202 29.465 2.303 1.00 12.72 ? 5 DG A C4 1
ATOM 99 P P . DG A 1 6 ? -4.837 31.620 8.368 1.00 17.10 ? 6 DG A P 1
ATOM 100 O OP1 . DG A 1 6 ? -3.917 31.859 9.499 1.00 26.22 ? 6 DG A OP1 1
ATOM 101 O OP2 . DG A 1 6 ? -6.272 31.333 8.552 1.00 20.65 ? 6 DG A OP2 1
ATOM 102 O "O5'" . DG A 1 6 ? -4.748 32.855 7.358 1.00 19.43 ? 6 DG A "O5'" 1
ATOM 103 C "C5'" . DG A 1 6 ? -3.651 33.446 6.727 1.00 22.37 ? 6 DG A "C5'" 1
ATOM 104 C "C4'" . DG A 1 6 ? -3.911 34.917 6.444 1.00 13.93 ? 6 DG A "C4'" 1
ATOM 105 O "O4'" . DG A 1 6 ? -4.552 35.067 5.138 1.00 16.12 ? 6 DG A "O4'" 1
ATOM 106 C "C3'" . DG A 1 6 ? -4.834 35.650 7.386 1.00 15.70 ? 6 DG A "C3'" 1
ATOM 107 O "O3'" . DG A 1 6 ? -4.201 36.881 7.728 1.00 25.58 ? 6 DG A "O3'" 1
ATOM 108 C "C2'" . DG A 1 6 ? -6.123 35.892 6.636 1.00 16.57 ? 6 DG A "C2'" 1
ATOM 109 C "C1'" . DG A 1 6 ? -5.627 36.004 5.216 1.00 18.26 ? 6 DG A "C1'" 1
ATOM 110 N N9 . DG A 1 6 ? -6.556 35.603 4.142 1.00 11.82 ? 6 DG A N9 1
ATOM 111 C C8 . DG A 1 6 ? -7.795 35.033 4.200 1.00 11.97 ? 6 DG A C8 1
ATOM 112 N N7 . DG A 1 6 ? -8.332 34.814 3.012 1.00 12.75 ? 6 DG A N7 1
ATOM 113 C C5 . DG A 1 6 ? -7.378 35.273 2.132 1.00 12.21 ? 6 DG A C5 1
ATOM 114 C C6 . DG A 1 6 ? -7.394 35.300 0.709 1.00 14.28 ? 6 DG A C6 1
ATOM 115 O O6 . DG A 1 6 ? -8.315 34.893 -0.005 1.00 13.18 ? 6 DG A O6 1
ATOM 116 N N1 . DG A 1 6 ? -6.233 35.846 0.172 1.00 11.55 ? 6 DG A N1 1
ATOM 117 C C2 . DG A 1 6 ? -5.175 36.314 0.934 1.00 12.88 ? 6 DG A C2 1
ATOM 118 N N2 . DG A 1 6 ? -4.123 36.814 0.246 1.00 13.91 ? 6 DG A N2 1
ATOM 119 N N3 . DG A 1 6 ? -5.162 36.289 2.253 1.00 13.12 ? 6 DG A N3 1
ATOM 120 C C4 . DG A 1 6 ? -6.268 35.768 2.791 1.00 11.91 ? 6 DG A C4 1
HETATM 121 C C1 . DR1 B 2 . ? 6.770 20.109 1.361 1.00 25.71 ? 7 DR1 A C1 1
HETATM 122 C C2 . DR1 B 2 . ? 6.535 19.971 2.713 1.00 23.90 ? 7 DR1 A C2 1
HETATM 123 C C3 . DR1 B 2 . ? 5.388 19.390 3.220 1.00 20.22 ? 7 DR1 A C3 1
HETATM 124 C C4 . DR1 B 2 . ? 4.391 18.904 2.382 1.00 25.45 ? 7 DR1 A C4 1
HETATM 125 C C5 . DR1 B 2 . ? 4.605 19.029 1.017 1.00 20.62 ? 7 DR1 A C5 1
HETATM 126 C C6 . DR1 B 2 . ? 3.615 18.549 0.206 1.00 18.57 ? 7 DR1 A C6 1
HETATM 127 C C7 . DR1 B 2 . ? 3.862 18.693 -1.122 1.00 15.83 ? 7 DR1 A C7 1
HETATM 128 N N8 . DR1 B 2 . ? 3.015 18.280 -2.109 1.00 29.58 ? 7 DR1 A N8 1
HETATM 129 C C9 . DR1 B 2 . ? 3.642 18.736 -3.369 1.00 17.01 ? 7 DR1 A C9 1
HETATM 130 C C10 . DR1 B 2 . ? 3.260 18.679 -4.749 1.00 29.51 ? 7 DR1 A C10 1
HETATM 131 C C11 . DR1 B 2 . ? 4.073 19.216 -5.743 1.00 31.59 ? 7 DR1 A C11 1
HETATM 132 C C12 . DR1 B 2 . ? 5.293 19.818 -5.418 1.00 24.69 ? 7 DR1 A C12 1
HETATM 133 C C13 . DR1 B 2 . ? 5.648 19.883 -4.062 1.00 33.06 ? 7 DR1 A C13 1
HETATM 134 C C14 . DR1 B 2 . ? 4.864 19.306 -3.065 1.00 17.92 ? 7 DR1 A C14 1
HETATM 135 C C15 . DR1 B 2 . ? 5.015 19.274 -1.650 1.00 23.16 ? 7 DR1 A C15 1
HETATM 136 N N16 . DR1 B 2 . ? 5.899 19.706 -0.865 1.00 32.15 ? 7 DR1 A N16 1
HETATM 137 C C17 . DR1 B 2 . ? 5.761 19.617 0.511 1.00 20.93 ? 7 DR1 A C17 1
HETATM 138 C C18 . DR1 B 2 . ? 7.127 20.326 -1.393 1.00 32.64 ? 7 DR1 A C18 1
HETATM 139 C C1 . DR1 C 2 . ? 6.177 12.157 -3.512 0.50 11.05 ? 8 DR1 A C1 1
HETATM 140 C C2 . DR1 C 2 . ? 6.703 12.428 -4.765 0.50 11.84 ? 8 DR1 A C2 1
HETATM 141 C C3 . DR1 C 2 . ? 7.923 13.095 -4.901 0.50 12.54 ? 8 DR1 A C3 1
HETATM 142 C C4 . DR1 C 2 . ? 8.614 13.487 -3.758 0.50 17.87 ? 8 DR1 A C4 1
HETATM 143 C C5 . DR1 C 2 . ? 8.085 13.214 -2.504 0.50 9.77 ? 8 DR1 A C5 1
HETATM 144 C C6 . DR1 C 2 . ? 8.816 13.627 -1.417 0.50 11.10 ? 8 DR1 A C6 1
HETATM 145 C C7 . DR1 C 2 . ? 8.291 13.357 -0.193 0.50 13.41 ? 8 DR1 A C7 1
HETATM 146 N N8 . DR1 C 2 . ? 8.880 13.694 0.991 0.50 16.65 ? 8 DR1 A N8 1
HETATM 147 C C9 . DR1 C 2 . ? 7.940 13.211 2.018 0.50 11.90 ? 8 DR1 A C9 1
HETATM 148 C C10 . DR1 C 2 . ? 7.956 13.246 3.460 0.50 12.78 ? 8 DR1 A C10 1
HETATM 149 C C11 . DR1 C 2 . ? 6.902 12.681 4.157 0.50 14.52 ? 8 DR1 A C11 1
HETATM 150 C C12 . DR1 C 2 . ? 5.822 12.102 3.497 0.50 22.68 ? 8 DR1 A C12 1
HETATM 151 C C13 . DR1 C 2 . ? 5.804 12.084 2.097 0.50 21.89 ? 8 DR1 A C13 1
HETATM 152 C C14 . DR1 C 2 . ? 6.858 12.639 1.380 0.50 17.92 ? 8 DR1 A C14 1
HETATM 153 C C15 . DR1 C 2 . ? 7.081 12.698 -0.029 0.50 16.57 ? 8 DR1 A C15 1
HETATM 154 N N16 . DR1 C 2 . ? 6.443 12.335 -1.056 0.50 18.82 ? 8 DR1 A N16 1
HETATM 155 C C17 . DR1 C 2 . ? 6.877 12.555 -2.359 0.50 13.41 ? 8 DR1 A C17 1
HETATM 156 C C18 . DR1 C 2 . ? 5.157 11.633 -0.898 0.50 20.52 ? 8 DR1 A C18 1
HETATM 157 O O . HOH D 3 . ? 7.794 14.316 -8.286 1.00 12.22 ? 3001 HOH A O 1
HETATM 158 O O . HOH D 3 . ? -1.938 31.905 11.038 1.00 21.82 ? 3002 HOH A O 1
HETATM 159 O O . HOH D 3 . ? -3.065 16.295 -9.846 1.00 25.25 ? 3003 HOH A O 1
HETATM 160 O O . HOH D 3 . ? -4.908 25.676 -3.596 1.00 25.87 ? 3004 HOH A O 1
HETATM 161 O O . HOH D 3 . ? -8.602 27.384 5.069 1.00 26.02 ? 3005 HOH A O 1
HETATM 162 O O . HOH D 3 . ? -3.347 26.508 -6.542 1.00 33.78 ? 3006 HOH A O 1
HETATM 163 O O . HOH D 3 . ? 1.132 25.057 -6.109 1.00 26.75 ? 3007 HOH A O 1
HETATM 164 O O . HOH D 3 . ? -11.563 34.033 2.677 1.00 37.31 ? 3008 HOH A O 1
HETATM 165 O O . HOH D 3 . ? 4.835 17.006 -10.808 1.00 26.75 ? 3009 HOH A O 1
HETATM 166 O O . HOH D 3 . ? -6.805 26.691 -2.295 1.00 36.58 ? 3010 HOH A O 1
HETATM 167 O O . HOH D 3 . ? -10.887 34.124 -0.199 1.00 32.80 ? 3011 HOH A O 1
HETATM 168 O O . HOH D 3 . ? -7.795 25.088 -1.537 1.00 31.26 ? 3012 HOH A O 1
HETATM 169 O O . HOH D 3 . ? -8.516 21.293 5.991 1.00 38.10 ? 3013 HOH A O 1
HETATM 170 O O . HOH D 3 . ? -10.364 15.623 0.057 1.00 43.93 ? 3014 HOH A O 1
HETATM 171 O O . HOH D 3 . ? -4.040 40.006 2.038 0.50 40.52 ? 3015 HOH A O 1
HETATM 172 O O . HOH D 3 . ? -0.909 18.454 -0.177 1.00 25.90 ? 3016 HOH A O 1
HETATM 173 O O . HOH D 3 . ? -2.843 18.876 -10.645 1.00 32.49 ? 3017 HOH A O 1
HETATM 174 O O . HOH D 3 . ? -4.788 16.768 -7.382 1.00 28.77 ? 3018 HOH A O 1
HETATM 175 O O . HOH D 3 . ? -14.670 20.245 1.051 1.00 46.48 ? 3019 HOH A O 1
HETATM 176 O O . HOH D 3 . ? -8.212 21.573 -3.289 1.00 46.69 ? 3020 HOH A O 1
HETATM 177 O O . HOH D 3 . ? -9.132 18.705 -0.410 1.00 32.22 ? 3021 HOH A O 1
HETATM 178 O O . HOH D 3 . ? -0.907 21.304 -7.899 1.00 25.54 ? 3022 HOH A O 1
HETATM 179 O O . HOH D 3 . ? 5.006 23.241 -6.690 1.00 24.80 ? 3023 HOH A O 1
HETATM 180 O O . HOH D 3 . ? 3.446 22.062 -8.835 1.00 25.15 ? 3026 HOH A O 1
HETATM 181 O O . HOH D 3 . ? -1.069 37.369 0.395 1.00 27.45 ? 3027 HOH A O 1
HETATM 182 O O . HOH D 3 . ? -5.319 21.568 -4.851 1.00 31.00 ? 3028 HOH A O 1
HETATM 183 O O . HOH D 3 . ? -5.304 18.090 2.346 1.00 44.10 ? 3029 HOH A O 1
HETATM 184 O O . HOH D 3 . ? -6.377 17.952 -7.531 1.00 41.61 ? 3030 HOH A O 1
HETATM 185 O O . HOH D 3 . ? -9.694 24.285 6.160 1.00 47.56 ? 3031 HOH A O 1
HETATM 186 O O . HOH D 3 . ? -7.321 33.227 10.111 1.00 34.06 ? 3032 HOH A O 1
HETATM 187 O O . HOH D 3 . ? -6.518 31.062 12.544 1.00 36.63 ? 3033 HOH A O 1
HETATM 188 O O . HOH D 3 . ? -8.576 27.509 0.576 1.00 29.75 ? 3034 HOH A O 1
HETATM 189 O O . HOH D 3 . ? -10.047 25.497 8.263 1.00 44.92 ? 3035 HOH A O 1
HETATM 190 O O . HOH D 3 . ? -6.332 26.741 10.463 1.00 33.81 ? 3036 HOH A O 1
HETATM 191 O O . HOH D 3 . ? -9.458 28.773 11.175 1.00 56.61 ? 3037 HOH A O 1
HETATM 192 O O . HOH D 3 . ? -6.605 18.617 -0.633 1.00 43.93 ? 3038 HOH A O 1
HETATM 193 O O . HOH D 3 . ? -2.253 16.235 -1.386 1.00 30.02 ? 3039 HOH A O 1
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