data_1IMR
#
_entry.id 1IMR
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.386
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1IMR pdb_00001imr 10.2210/pdb1imr/pdb
RCSB DDF061 ? ?
WWPDB D_1000174200 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1996-04-04
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1IMR
_pdbx_database_status.recvd_initial_deposition_date 1995-10-23
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Berger, I.' 1
'Su, L.' 2
'Spitzner, J.R.' 3
'Kang, C.' 4
'Burke, T.G.' 5
'Rich, A.' 6
#
_citation.id primary
_citation.title
'Molecular structure of the halogenated anti-cancer drug iododoxorubicin complexed with d(TGTACA) and d(CGATCG).'
_citation.journal_abbrev 'Nucleic Acids Res.'
_citation.journal_volume 23
_citation.page_first 4488
_citation.page_last 4494
_citation.year 1995
_citation.journal_id_ASTM NARHAD
_citation.country UK
_citation.journal_id_ISSN 0305-1048
_citation.journal_id_CSD 0389
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 7501474
_citation.pdbx_database_id_DOI 10.1093/nar/23.21.4488
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Berger, I.' 1 ?
primary 'Su, L.' 2 ?
primary 'Spitzner, J.R.' 3 ?
primary 'Kang, C.' 4 ?
primary 'Burke, T.G.' 5 ?
primary 'Rich, A.' 6 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
;
1808.229 1 ? ? ? ?
2 non-polymer syn "4'-DEOXY-4'-IODODOXORUBICIN" 654.424 1 ? ? ? ?
3 water nat water 18.015 49 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DG)(DT)(DA)(DC)(DA)'
_entity_poly.pdbx_seq_one_letter_code_can TGTACA
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 "4'-DEOXY-4'-IODODOXORUBICIN" DM7
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DG n
1 3 DT n
1 4 DA n
1 5 DC n
1 6 DA n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DM7 non-polymer . "4'-DEOXY-4'-IODODOXORUBICIN" "4'-DEOXY-4'-IODOADRIAMYCIN" 'C27 H29 I N O10 1' 654.424
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1 1 DT T A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DT 3 3 3 DT T A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DA 6 6 6 DA A A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DM7 1 7 7 DM7 DM7 A .
C 3 HOH 1 8 8 HOH HOH A .
C 3 HOH 2 9 9 HOH HOH A .
C 3 HOH 3 10 10 HOH HOH A .
C 3 HOH 4 11 11 HOH HOH A .
C 3 HOH 5 12 12 HOH HOH A .
C 3 HOH 6 13 13 HOH HOH A .
C 3 HOH 7 14 14 HOH HOH A .
C 3 HOH 8 15 15 HOH HOH A .
C 3 HOH 9 16 16 HOH HOH A .
C 3 HOH 10 17 17 HOH HOH A .
C 3 HOH 11 18 18 HOH HOH A .
C 3 HOH 12 19 19 HOH HOH A .
C 3 HOH 13 20 20 HOH HOH A .
C 3 HOH 14 21 21 HOH HOH A .
C 3 HOH 15 22 22 HOH HOH A .
C 3 HOH 16 23 23 HOH HOH A .
C 3 HOH 17 24 24 HOH HOH A .
C 3 HOH 18 25 25 HOH HOH A .
C 3 HOH 19 26 26 HOH HOH A .
C 3 HOH 20 27 27 HOH HOH A .
C 3 HOH 21 28 28 HOH HOH A .
C 3 HOH 22 29 29 HOH HOH A .
C 3 HOH 23 30 30 HOH HOH A .
C 3 HOH 24 31 31 HOH HOH A .
C 3 HOH 25 32 32 HOH HOH A .
C 3 HOH 26 33 33 HOH HOH A .
C 3 HOH 27 34 34 HOH HOH A .
C 3 HOH 28 35 35 HOH HOH A .
C 3 HOH 29 36 36 HOH HOH A .
C 3 HOH 30 37 37 HOH HOH A .
C 3 HOH 31 38 38 HOH HOH A .
C 3 HOH 32 39 39 HOH HOH A .
C 3 HOH 33 40 40 HOH HOH A .
C 3 HOH 34 41 41 HOH HOH A .
C 3 HOH 35 42 42 HOH HOH A .
C 3 HOH 36 43 43 HOH HOH A .
C 3 HOH 37 44 44 HOH HOH A .
C 3 HOH 38 45 45 HOH HOH A .
C 3 HOH 39 46 46 HOH HOH A .
C 3 HOH 40 47 47 HOH HOH A .
C 3 HOH 41 48 48 HOH HOH A .
C 3 HOH 42 49 49 HOH HOH A .
C 3 HOH 43 50 50 HOH HOH A .
C 3 HOH 44 51 51 HOH HOH A .
C 3 HOH 45 52 52 HOH HOH A .
C 3 HOH 46 53 53 HOH HOH A .
C 3 HOH 47 54 54 HOH HOH A .
C 3 HOH 48 55 55 HOH HOH A .
C 3 HOH 49 56 56 HOH HOH A .
#
_software.name X-PLOR
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 1IMR
_cell.length_a 27.960
_cell.length_b 27.960
_cell.length_c 52.570
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1IMR
_symmetry.space_group_name_H-M 'P 41 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 92
#
_exptl.entry_id 1IMR
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.84
_exptl_crystal.density_percent_sol 56.71
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 277.00
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.50
_exptl_crystal_grow.pdbx_details 'pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 277.00K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 MPD ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 SPERMINE ? ? ?
1 5 1 KCL ? ? ?
1 6 1 'K CACODYLATE' ? ? ?
1 7 2 WATER ? ? ?
1 8 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 277.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source ?
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_refine.entry_id 1IMR
_refine.ls_number_reflns_obs 2521
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 10.000
_refine.ls_d_res_high 1.600
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.1760000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.1760000
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 133
_refine_hist.pdbx_number_atoms_ligand 39
_refine_hist.number_atoms_solvent 49
_refine_hist.number_atoms_total 221
_refine_hist.d_res_high 1.600
_refine_hist.d_res_low 10.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 1IMR
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1IMR
_struct.title
'MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1IMR
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1IMR
_struct_ref.pdbx_db_accession 1IMR
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1IMR
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 1IMR
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 27.9600000000 -1.0000000000
0.0000000000 0.0000000000 27.9600000000 0.0000000000 0.0000000000 -1.0000000000 26.2850000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 6 N1 ? ? A DT 1 A DA 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DA 6 N6 ? ? A DT 1 A DA 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 3 A DA 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 3 A DA 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 3 N3 ? ? A DA 4 A DT 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 3 O4 ? ? A DA 4 A DT 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 1 N3 ? ? A DA 6 A DT 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 1 O4 ? ? A DA 6 A DT 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A DM7 7 ? 12 'BINDING SITE FOR RESIDUE DM7 A 7'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 12 DT A 1 ? DT A 1 . ? 8_665 ?
2 AC1 12 DG A 2 ? DG A 2 . ? 8_665 ?
3 AC1 12 DT A 3 ? DT A 3 . ? 8_665 ?
4 AC1 12 DA A 4 ? DA A 4 . ? 1_555 ?
5 AC1 12 DC A 5 ? DC A 5 . ? 1_555 ?
6 AC1 12 DA A 6 ? DA A 6 . ? 1_555 ?
7 AC1 12 HOH C . ? HOH A 8 . ? 1_555 ?
8 AC1 12 HOH C . ? HOH A 9 . ? 1_555 ?
9 AC1 12 HOH C . ? HOH A 23 . ? 1_555 ?
10 AC1 12 HOH C . ? HOH A 25 . ? 1_555 ?
11 AC1 12 HOH C . ? HOH A 28 . ? 1_555 ?
12 AC1 12 HOH C . ? HOH A 45 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C5 A DT 1 ? ? C7 A DT 1 ? ? 1.555 1.496 0.059 0.006 N
2 1 C5 A DT 3 ? ? C7 A DT 3 ? ? 1.550 1.496 0.054 0.006 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.13 108.30 3.83 0.30 N
2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.25 108.30 3.95 0.30 N
3 1 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.22 122.90 -3.68 0.60 N
4 1 "C1'" A DC 5 ? ? "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? 102.29 110.10 -7.81 1.00 N
5 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 123.27 118.90 4.37 0.60 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DM7 C1 C Y N 108
DM7 C2 C Y N 109
DM7 C3 C Y N 110
DM7 C4 C Y N 111
DM7 C5 C N N 112
DM7 C6 C Y N 113
DM7 C7 C N S 114
DM7 C8 C N N 115
DM7 C9 C N S 116
DM7 C10 C N N 117
DM7 C11 C Y N 118
DM7 C12 C N N 119
DM7 C13 C N N 120
DM7 C14 C N N 121
DM7 C15 C Y N 122
DM7 C16 C Y N 123
DM7 C17 C Y N 124
DM7 C18 C Y N 125
DM7 C19 C Y N 126
DM7 C20 C Y N 127
DM7 C21 C N N 128
DM7 O4 O N N 129
DM7 O5 O N N 130
DM7 O6 O N N 131
DM7 O7 O N N 132
DM7 O9 O N N 133
DM7 O11 O N N 134
DM7 O12 O N N 135
DM7 O13 O N N 136
DM7 O14 O N N 137
DM7 "C1'" C N R 138
DM7 "C2'" C N N 139
DM7 "C3'" C N S 140
DM7 "C4'" C N S 141
DM7 "C5'" C N S 142
DM7 "C6'" C N N 143
DM7 "O5'" O N N 144
DM7 "N3'" N N N 145
DM7 "I4'" I N N 146
DM7 H1 H N N 147
DM7 H2 H N N 148
DM7 H3 H N N 149
DM7 H7 H N N 150
DM7 H81 H N N 151
DM7 H82 H N N 152
DM7 H101 H N N 153
DM7 H102 H N N 154
DM7 H141 H N N 155
DM7 H142 H N N 156
DM7 H211 H N N 157
DM7 H212 H N N 158
DM7 H213 H N N 159
DM7 HO6 H N N 160
DM7 HO9 H N N 161
DM7 HO11 H N N 162
DM7 HO14 H N N 163
DM7 "H1'" H N N 164
DM7 "H2'1" H N N 165
DM7 "H2'2" H N N 166
DM7 "H3'" H N N 167
DM7 "H4'" H N N 168
DM7 "H5'" H N N 169
DM7 "H6'1" H N N 170
DM7 "H6'2" H N N 171
DM7 "H6'3" H N N 172
DM7 "HN'1" H N N 173
DM7 "HN'2" H N N 174
DM7 "HN'3" H N N 175
DT OP3 O N N 176
DT P P N N 177
DT OP1 O N N 178
DT OP2 O N N 179
DT "O5'" O N N 180
DT "C5'" C N N 181
DT "C4'" C N R 182
DT "O4'" O N N 183
DT "C3'" C N S 184
DT "O3'" O N N 185
DT "C2'" C N N 186
DT "C1'" C N R 187
DT N1 N N N 188
DT C2 C N N 189
DT O2 O N N 190
DT N3 N N N 191
DT C4 C N N 192
DT O4 O N N 193
DT C5 C N N 194
DT C7 C N N 195
DT C6 C N N 196
DT HOP3 H N N 197
DT HOP2 H N N 198
DT "H5'" H N N 199
DT "H5''" H N N 200
DT "H4'" H N N 201
DT "H3'" H N N 202
DT "HO3'" H N N 203
DT "H2'" H N N 204
DT "H2''" H N N 205
DT "H1'" H N N 206
DT H3 H N N 207
DT H71 H N N 208
DT H72 H N N 209
DT H73 H N N 210
DT H6 H N N 211
HOH O O N N 212
HOH H1 H N N 213
HOH H2 H N N 214
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DM7 C1 C2 doub Y N 113
DM7 C1 C15 sing Y N 114
DM7 C1 H1 sing N N 115
DM7 C2 C3 sing Y N 116
DM7 C2 H2 sing N N 117
DM7 C3 C4 doub Y N 118
DM7 C3 H3 sing N N 119
DM7 C4 C16 sing Y N 120
DM7 C4 O4 sing N N 121
DM7 C5 C16 sing N N 122
DM7 C5 C17 sing N N 123
DM7 C5 O5 doub N N 124
DM7 C6 C17 doub Y N 125
DM7 C6 C19 sing Y N 126
DM7 C6 O6 sing N N 127
DM7 C7 C8 sing N N 128
DM7 C7 C19 sing N N 129
DM7 C7 O7 sing N N 130
DM7 C7 H7 sing N N 131
DM7 C8 C9 sing N N 132
DM7 C8 H81 sing N N 133
DM7 C8 H82 sing N N 134
DM7 C9 C10 sing N N 135
DM7 C9 C13 sing N N 136
DM7 C9 O9 sing N N 137
DM7 C10 C20 sing N N 138
DM7 C10 H101 sing N N 139
DM7 C10 H102 sing N N 140
DM7 C11 C18 doub Y N 141
DM7 C11 C20 sing Y N 142
DM7 C11 O11 sing N N 143
DM7 C12 C15 sing N N 144
DM7 C12 C18 sing N N 145
DM7 C12 O12 doub N N 146
DM7 C13 C14 sing N N 147
DM7 C13 O13 doub N N 148
DM7 C14 O14 sing N N 149
DM7 C14 H141 sing N N 150
DM7 C14 H142 sing N N 151
DM7 C15 C16 doub Y N 152
DM7 C17 C18 sing Y N 153
DM7 C19 C20 doub Y N 154
DM7 C21 O4 sing N N 155
DM7 C21 H211 sing N N 156
DM7 C21 H212 sing N N 157
DM7 C21 H213 sing N N 158
DM7 O6 HO6 sing N N 159
DM7 O7 "C1'" sing N N 160
DM7 O9 HO9 sing N N 161
DM7 O11 HO11 sing N N 162
DM7 O14 HO14 sing N N 163
DM7 "C1'" "C2'" sing N N 164
DM7 "C1'" "O5'" sing N N 165
DM7 "C1'" "H1'" sing N N 166
DM7 "C2'" "C3'" sing N N 167
DM7 "C2'" "H2'1" sing N N 168
DM7 "C2'" "H2'2" sing N N 169
DM7 "C3'" "C4'" sing N N 170
DM7 "C3'" "N3'" sing N N 171
DM7 "C3'" "H3'" sing N N 172
DM7 "C4'" "C5'" sing N N 173
DM7 "C4'" "I4'" sing N N 174
DM7 "C4'" "H4'" sing N N 175
DM7 "C5'" "C6'" sing N N 176
DM7 "C5'" "O5'" sing N N 177
DM7 "C5'" "H5'" sing N N 178
DM7 "C6'" "H6'1" sing N N 179
DM7 "C6'" "H6'2" sing N N 180
DM7 "C6'" "H6'3" sing N N 181
DM7 "N3'" "HN'1" sing N N 182
DM7 "N3'" "HN'2" sing N N 183
DM7 "N3'" "HN'3" sing N N 184
DT OP3 P sing N N 185
DT OP3 HOP3 sing N N 186
DT P OP1 doub N N 187
DT P OP2 sing N N 188
DT P "O5'" sing N N 189
DT OP2 HOP2 sing N N 190
DT "O5'" "C5'" sing N N 191
DT "C5'" "C4'" sing N N 192
DT "C5'" "H5'" sing N N 193
DT "C5'" "H5''" sing N N 194
DT "C4'" "O4'" sing N N 195
DT "C4'" "C3'" sing N N 196
DT "C4'" "H4'" sing N N 197
DT "O4'" "C1'" sing N N 198
DT "C3'" "O3'" sing N N 199
DT "C3'" "C2'" sing N N 200
DT "C3'" "H3'" sing N N 201
DT "O3'" "HO3'" sing N N 202
DT "C2'" "C1'" sing N N 203
DT "C2'" "H2'" sing N N 204
DT "C2'" "H2''" sing N N 205
DT "C1'" N1 sing N N 206
DT "C1'" "H1'" sing N N 207
DT N1 C2 sing N N 208
DT N1 C6 sing N N 209
DT C2 O2 doub N N 210
DT C2 N3 sing N N 211
DT N3 C4 sing N N 212
DT N3 H3 sing N N 213
DT C4 O4 doub N N 214
DT C4 C5 sing N N 215
DT C5 C7 sing N N 216
DT C5 C6 doub N N 217
DT C7 H71 sing N N 218
DT C7 H72 sing N N 219
DT C7 H73 sing N N 220
DT C6 H6 sing N N 221
HOH O H1 sing N N 222
HOH O H2 sing N N 223
#
_ndb_struct_conf_na.entry_id 1IMR
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DT 1 1_555 A DA 6 8_665 -0.164 -0.115 0.198 7.714 0.863 -0.152 1 A_DT1:DA6_A A 1 ? A 6 ? 20 1
1 A DG 2 1_555 A DC 5 8_665 -0.025 -0.051 -0.351 -16.634 4.470 0.585 2 A_DG2:DC5_A A 2 ? A 5 ? 19 1
1 A DT 3 1_555 A DA 4 8_665 -0.039 -0.160 0.113 -1.397 -5.097 2.962 3 A_DT3:DA4_A A 3 ? A 4 ? 20 1
1 A DA 4 1_555 A DT 3 8_665 0.039 -0.160 0.113 1.397 -5.097 2.962 4 A_DA4:DT3_A A 4 ? A 3 ? 20 1
1 A DC 5 1_555 A DG 2 8_665 0.025 -0.051 -0.351 16.634 4.470 0.585 5 A_DC5:DG2_A A 5 ? A 2 ? 19 1
1 A DA 6 1_555 A DT 1 8_665 0.164 -0.115 0.198 -7.714 0.863 -0.152 6 A_DA6:DT1_A A 6 ? A 1 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DT 1 1_555 A DA 6 8_665 A DG 2 1_555 A DC 5 8_665 1.239 1.181 7.017 3.547 -5.083 36.979 3.264 -0.934 6.885 -7.945 -5.545
37.477 1 AA_DT1DG2:DC5DA6_AA A 1 ? A 6 ? A 2 ? A 5 ?
1 A DG 2 1_555 A DC 5 8_665 A DT 3 1_555 A DA 4 8_665 -1.119 0.089 3.034 -3.283 0.431 28.682 0.088 1.553 3.141 0.866 6.599
28.868 2 AA_DG2DT3:DA4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ?
1 A DT 3 1_555 A DA 4 8_665 A DA 4 1_555 A DT 3 8_665 0.000 -0.086 3.372 0.000 4.423 37.936 -0.706 0.000 3.341 6.775 0.000
38.184 3 AA_DT3DA4:DT3DA4_AA A 3 ? A 4 ? A 4 ? A 3 ?
1 A DA 4 1_555 A DT 3 8_665 A DC 5 1_555 A DG 2 8_665 1.119 0.089 3.034 3.283 0.431 28.682 0.088 -1.553 3.141 0.866 -6.599
28.868 4 AA_DA4DC5:DG2DT3_AA A 4 ? A 3 ? A 5 ? A 2 ?
1 A DC 5 1_555 A DG 2 8_665 A DA 6 1_555 A DT 1 8_665 -1.239 1.181 7.017 -3.547 -5.083 36.979 3.264 0.934 6.885 -7.945 5.545
37.477 5 AA_DC5DA6:DT1DG2_AA A 5 ? A 2 ? A 6 ? A 1 ?
#
_atom_sites.entry_id 1IMR
_atom_sites.fract_transf_matrix[1][1] 0.035765
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.035765
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.019022
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
I
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DT A 1 1 ? 9.342 20.191 22.609 1.00 12.71 ? 1 DT A "O5'" 1
ATOM 2 C "C5'" . DT A 1 1 ? 9.676 21.126 23.622 1.00 10.98 ? 1 DT A "C5'" 1
ATOM 3 C "C4'" . DT A 1 1 ? 11.144 21.027 24.103 1.00 11.36 ? 1 DT A "C4'" 1
ATOM 4 O "O4'" . DT A 1 1 ? 11.367 19.874 24.932 1.00 11.17 ? 1 DT A "O4'" 1
ATOM 5 C "C3'" . DT A 1 1 ? 12.113 20.910 22.869 1.00 12.78 ? 1 DT A "C3'" 1
ATOM 6 O "O3'" . DT A 1 1 ? 13.275 21.671 23.140 1.00 13.41 ? 1 DT A "O3'" 1
ATOM 7 C "C2'" . DT A 1 1 ? 12.498 19.418 22.921 1.00 10.63 ? 1 DT A "C2'" 1
ATOM 8 C "C1'" . DT A 1 1 ? 12.392 19.024 24.406 1.00 10.14 ? 1 DT A "C1'" 1
ATOM 9 N N1 . DT A 1 1 ? 12.021 17.596 24.476 1.00 9.76 ? 1 DT A N1 1
ATOM 10 C C2 . DT A 1 1 ? 13.046 16.638 24.547 1.00 8.62 ? 1 DT A C2 1
ATOM 11 O O2 . DT A 1 1 ? 14.258 16.885 24.574 1.00 8.23 ? 1 DT A O2 1
ATOM 12 N N3 . DT A 1 1 ? 12.599 15.331 24.592 1.00 8.68 ? 1 DT A N3 1
ATOM 13 C C4 . DT A 1 1 ? 11.291 14.890 24.575 1.00 6.43 ? 1 DT A C4 1
ATOM 14 O O4 . DT A 1 1 ? 11.031 13.686 24.615 1.00 7.33 ? 1 DT A O4 1
ATOM 15 C C5 . DT A 1 1 ? 10.315 15.944 24.504 1.00 6.83 ? 1 DT A C5 1
ATOM 16 C C7 . DT A 1 1 ? 8.806 15.569 24.482 1.00 8.28 ? 1 DT A C7 1
ATOM 17 C C6 . DT A 1 1 ? 10.690 17.228 24.458 1.00 8.63 ? 1 DT A C6 1
ATOM 18 H H3 . DT A 1 1 ? 13.314 14.624 24.649 1.00 10.00 ? 1 DT A H3 1
ATOM 19 H "HO5'" . DT A 1 1 ? 9.784 20.470 21.802 1.00 10.00 ? 1 DT A "HO5'" 1
ATOM 20 P P . DG A 1 2 ? 13.841 22.809 22.166 1.00 15.68 ? 2 DG A P 1
ATOM 21 O OP1 . DG A 1 2 ? 14.881 23.560 22.905 1.00 15.03 ? 2 DG A OP1 1
ATOM 22 O OP2 . DG A 1 2 ? 12.745 23.508 21.474 1.00 15.49 ? 2 DG A OP2 1
ATOM 23 O "O5'" . DG A 1 2 ? 14.556 21.916 21.096 1.00 14.66 ? 2 DG A "O5'" 1
ATOM 24 C "C5'" . DG A 1 2 ? 15.836 21.338 21.291 1.00 16.64 ? 2 DG A "C5'" 1
ATOM 25 C "C4'" . DG A 1 2 ? 16.168 20.470 20.077 1.00 15.04 ? 2 DG A "C4'" 1
ATOM 26 O "O4'" . DG A 1 2 ? 15.291 19.351 20.012 1.00 15.23 ? 2 DG A "O4'" 1
ATOM 27 C "C3'" . DG A 1 2 ? 15.956 21.293 18.758 1.00 17.10 ? 2 DG A "C3'" 1
ATOM 28 O "O3'" . DG A 1 2 ? 16.926 20.865 17.816 1.00 17.06 ? 2 DG A "O3'" 1
ATOM 29 C "C2'" . DG A 1 2 ? 14.601 20.764 18.306 1.00 15.70 ? 2 DG A "C2'" 1
ATOM 30 C "C1'" . DG A 1 2 ? 14.820 19.292 18.682 1.00 13.91 ? 2 DG A "C1'" 1
ATOM 31 N N9 . DG A 1 2 ? 13.588 18.491 18.561 1.00 12.37 ? 2 DG A N9 1
ATOM 32 C C8 . DG A 1 2 ? 12.260 18.853 18.548 1.00 11.49 ? 2 DG A C8 1
ATOM 33 N N7 . DG A 1 2 ? 11.466 17.834 18.377 1.00 12.24 ? 2 DG A N7 1
ATOM 34 C C5 . DG A 1 2 ? 12.319 16.737 18.273 1.00 9.56 ? 2 DG A C5 1
ATOM 35 C C6 . DG A 1 2 ? 12.037 15.362 18.076 1.00 8.52 ? 2 DG A C6 1
ATOM 36 O O6 . DG A 1 2 ? 10.945 14.815 17.947 1.00 10.11 ? 2 DG A O6 1
ATOM 37 N N1 . DG A 1 2 ? 13.184 14.585 18.031 1.00 5.19 ? 2 DG A N1 1
ATOM 38 C C2 . DG A 1 2 ? 14.468 15.065 18.162 1.00 7.51 ? 2 DG A C2 1
ATOM 39 N N2 . DG A 1 2 ? 15.438 14.163 18.095 1.00 5.45 ? 2 DG A N2 1
ATOM 40 N N3 . DG A 1 2 ? 14.746 16.364 18.345 1.00 8.27 ? 2 DG A N3 1
ATOM 41 C C4 . DG A 1 2 ? 13.624 17.134 18.388 1.00 10.61 ? 2 DG A C4 1
ATOM 42 H H1 . DG A 1 2 ? 13.034 13.594 17.903 1.00 10.00 ? 2 DG A H1 1
ATOM 43 H H21 . DG A 1 2 ? 16.413 14.401 18.207 1.00 10.00 ? 2 DG A H21 1
ATOM 44 H H22 . DG A 1 2 ? 15.167 13.206 17.924 1.00 10.00 ? 2 DG A H22 1
ATOM 45 P P . DT A 1 3 ? 17.722 21.891 16.899 1.00 17.09 ? 3 DT A P 1
ATOM 46 O OP1 . DT A 1 3 ? 18.371 22.870 17.793 1.00 17.49 ? 3 DT A OP1 1
ATOM 47 O OP2 . DT A 1 3 ? 16.833 22.341 15.808 1.00 17.03 ? 3 DT A OP2 1
ATOM 48 O "O5'" . DT A 1 3 ? 18.813 20.912 16.293 1.00 17.34 ? 3 DT A "O5'" 1
ATOM 49 C "C5'" . DT A 1 3 ? 19.727 20.267 17.146 1.00 14.19 ? 3 DT A "C5'" 1
ATOM 50 C "C4'" . DT A 1 3 ? 19.966 18.844 16.688 1.00 14.43 ? 3 DT A "C4'" 1
ATOM 51 O "O4'" . DT A 1 3 ? 18.742 18.074 16.783 1.00 13.17 ? 3 DT A "O4'" 1
ATOM 52 C "C3'" . DT A 1 3 ? 20.450 18.842 15.197 1.00 14.48 ? 3 DT A "C3'" 1
ATOM 53 O "O3'" . DT A 1 3 ? 21.608 18.002 15.176 1.00 13.67 ? 3 DT A "O3'" 1
ATOM 54 C "C2'" . DT A 1 3 ? 19.216 18.210 14.485 1.00 14.07 ? 3 DT A "C2'" 1
ATOM 55 C "C1'" . DT A 1 3 ? 18.548 17.335 15.572 1.00 11.21 ? 3 DT A "C1'" 1
ATOM 56 N N1 . DT A 1 3 ? 17.101 17.169 15.351 1.00 10.61 ? 3 DT A N1 1
ATOM 57 C C2 . DT A 1 3 ? 16.621 15.874 15.232 1.00 9.60 ? 3 DT A C2 1
ATOM 58 O O2 . DT A 1 3 ? 17.338 14.873 15.297 1.00 7.65 ? 3 DT A O2 1
ATOM 59 N N3 . DT A 1 3 ? 15.257 15.764 15.030 1.00 8.16 ? 3 DT A N3 1
ATOM 60 C C4 . DT A 1 3 ? 14.361 16.799 14.939 1.00 8.57 ? 3 DT A C4 1
ATOM 61 O O4 . DT A 1 3 ? 13.180 16.555 14.770 1.00 10.47 ? 3 DT A O4 1
ATOM 62 C C5 . DT A 1 3 ? 14.940 18.100 15.067 1.00 9.04 ? 3 DT A C5 1
ATOM 63 C C7 . DT A 1 3 ? 14.047 19.362 14.957 1.00 9.37 ? 3 DT A C7 1
ATOM 64 C C6 . DT A 1 3 ? 16.258 18.246 15.266 1.00 10.26 ? 3 DT A C6 1
ATOM 65 H H3 . DT A 1 3 ? 14.900 14.822 14.936 1.00 10.00 ? 3 DT A H3 1
ATOM 66 P P . DA A 1 4 ? 22.502 17.786 13.876 1.00 12.88 ? 4 DA A P 1
ATOM 67 O OP1 . DA A 1 4 ? 23.892 17.622 14.337 1.00 13.84 ? 4 DA A OP1 1
ATOM 68 O OP2 . DA A 1 4 ? 22.135 18.786 12.856 1.00 13.34 ? 4 DA A OP2 1
ATOM 69 O "O5'" . DA A 1 4 ? 21.996 16.378 13.297 1.00 13.38 ? 4 DA A "O5'" 1
ATOM 70 C "C5'" . DA A 1 4 ? 22.228 15.163 13.978 1.00 13.14 ? 4 DA A "C5'" 1
ATOM 71 C "C4'" . DA A 1 4 ? 21.676 13.969 13.180 1.00 13.05 ? 4 DA A "C4'" 1
ATOM 72 O "O4'" . DA A 1 4 ? 20.254 14.007 13.100 1.00 12.24 ? 4 DA A "O4'" 1
ATOM 73 C "C3'" . DA A 1 4 ? 22.203 14.036 11.749 1.00 13.71 ? 4 DA A "C3'" 1
ATOM 74 O "O3'" . DA A 1 4 ? 22.630 12.718 11.404 1.00 13.22 ? 4 DA A "O3'" 1
ATOM 75 C "C2'" . DA A 1 4 ? 20.952 14.482 10.924 1.00 12.20 ? 4 DA A "C2'" 1
ATOM 76 C "C1'" . DA A 1 4 ? 19.821 13.912 11.740 1.00 10.11 ? 4 DA A "C1'" 1
ATOM 77 N N9 . DA A 1 4 ? 18.621 14.703 11.681 1.00 8.60 ? 4 DA A N9 1
ATOM 78 C C8 . DA A 1 4 ? 18.459 16.059 11.739 1.00 8.12 ? 4 DA A C8 1
ATOM 79 N N7 . DA A 1 4 ? 17.208 16.427 11.699 1.00 6.89 ? 4 DA A N7 1
ATOM 80 C C5 . DA A 1 4 ? 16.508 15.229 11.604 1.00 6.40 ? 4 DA A C5 1
ATOM 81 C C6 . DA A 1 4 ? 15.136 14.932 11.508 1.00 6.61 ? 4 DA A C6 1
ATOM 82 N N6 . DA A 1 4 ? 14.172 15.865 11.500 1.00 5.57 ? 4 DA A N6 1
ATOM 83 N N1 . DA A 1 4 ? 14.820 13.642 11.417 1.00 6.61 ? 4 DA A N1 1
ATOM 84 C C2 . DA A 1 4 ? 15.769 12.736 11.420 1.00 6.07 ? 4 DA A C2 1
ATOM 85 N N3 . DA A 1 4 ? 17.074 12.877 11.501 1.00 8.02 ? 4 DA A N3 1
ATOM 86 C C4 . DA A 1 4 ? 17.367 14.184 11.591 1.00 5.57 ? 4 DA A C4 1
ATOM 87 H H61 . DA A 1 4 ? 14.408 16.847 11.572 1.00 10.00 ? 4 DA A H61 1
ATOM 88 H H62 . DA A 1 4 ? 13.207 15.574 11.418 1.00 10.00 ? 4 DA A H62 1
ATOM 89 P P . DC A 1 5 ? 23.444 12.474 10.061 1.00 12.47 ? 5 DC A P 1
ATOM 90 O OP1 . DC A 1 5 ? 24.224 11.222 10.221 1.00 12.58 ? 5 DC A OP1 1
ATOM 91 O OP2 . DC A 1 5 ? 24.125 13.709 9.643 1.00 10.64 ? 5 DC A OP2 1
ATOM 92 O "O5'" . DC A 1 5 ? 22.302 12.214 8.991 1.00 11.81 ? 5 DC A "O5'" 1
ATOM 93 C "C5'" . DC A 1 5 ? 21.570 11.000 9.025 1.00 12.56 ? 5 DC A "C5'" 1
ATOM 94 C "C4'" . DC A 1 5 ? 20.383 11.090 8.069 1.00 13.12 ? 5 DC A "C4'" 1
ATOM 95 O "O4'" . DC A 1 5 ? 19.430 12.069 8.588 1.00 12.98 ? 5 DC A "O4'" 1
ATOM 96 C "C3'" . DC A 1 5 ? 20.879 11.556 6.660 1.00 13.44 ? 5 DC A "C3'" 1
ATOM 97 O "O3'" . DC A 1 5 ? 20.203 10.841 5.650 1.00 13.65 ? 5 DC A "O3'" 1
ATOM 98 C "C2'" . DC A 1 5 ? 20.363 12.987 6.634 1.00 12.57 ? 5 DC A "C2'" 1
ATOM 99 C "C1'" . DC A 1 5 ? 19.071 12.780 7.430 1.00 11.05 ? 5 DC A "C1'" 1
ATOM 100 N N1 . DC A 1 5 ? 18.377 14.026 7.815 1.00 10.92 ? 5 DC A N1 1
ATOM 101 C C2 . DC A 1 5 ? 17.019 13.880 8.028 1.00 8.22 ? 5 DC A C2 1
ATOM 102 O O2 . DC A 1 5 ? 16.446 12.795 8.001 1.00 9.87 ? 5 DC A O2 1
ATOM 103 N N3 . DC A 1 5 ? 16.306 14.971 8.288 1.00 8.07 ? 5 DC A N3 1
ATOM 104 C C4 . DC A 1 5 ? 16.855 16.183 8.364 1.00 8.31 ? 5 DC A C4 1
ATOM 105 N N4 . DC A 1 5 ? 15.999 17.168 8.588 1.00 8.80 ? 5 DC A N4 1
ATOM 106 C C5 . DC A 1 5 ? 18.259 16.383 8.182 1.00 9.83 ? 5 DC A C5 1
ATOM 107 C C6 . DC A 1 5 ? 18.982 15.271 7.906 1.00 9.83 ? 5 DC A C6 1
ATOM 108 H H41 . DC A 1 5 ? 16.240 18.148 8.635 1.00 10.00 ? 5 DC A H41 1
ATOM 109 H H42 . DC A 1 5 ? 15.043 16.858 8.709 1.00 10.00 ? 5 DC A H42 1
ATOM 110 P P . DA A 1 6 ? 20.992 9.709 4.836 1.00 14.78 ? 6 DA A P 1
ATOM 111 O OP1 . DA A 1 6 ? 21.525 8.711 5.796 1.00 14.22 ? 6 DA A OP1 1
ATOM 112 O OP2 . DA A 1 6 ? 21.886 10.369 3.873 1.00 14.53 ? 6 DA A OP2 1
ATOM 113 O "O5'" . DA A 1 6 ? 19.790 9.082 4.026 1.00 12.06 ? 6 DA A "O5'" 1
ATOM 114 C "C5'" . DA A 1 6 ? 18.902 8.144 4.632 1.00 11.95 ? 6 DA A "C5'" 1
ATOM 115 C "C4'" . DA A 1 6 ? 17.851 7.615 3.625 1.00 10.86 ? 6 DA A "C4'" 1
ATOM 116 O "O4'" . DA A 1 6 ? 16.965 8.697 3.231 1.00 9.90 ? 6 DA A "O4'" 1
ATOM 117 C "C3'" . DA A 1 6 ? 18.545 7.023 2.343 1.00 9.60 ? 6 DA A "C3'" 1
ATOM 118 O "O3'" . DA A 1 6 ? 17.716 6.022 1.764 1.00 11.80 ? 6 DA A "O3'" 1
ATOM 119 C "C2'" . DA A 1 6 ? 18.533 8.259 1.430 1.00 9.35 ? 6 DA A "C2'" 1
ATOM 120 C "C1'" . DA A 1 6 ? 17.205 8.986 1.836 1.00 8.57 ? 6 DA A "C1'" 1
ATOM 121 N N9 . DA A 1 6 ? 17.328 10.431 1.738 1.00 6.84 ? 6 DA A N9 1
ATOM 122 C C8 . DA A 1 6 ? 18.460 11.191 1.774 1.00 6.15 ? 6 DA A C8 1
ATOM 123 N N7 . DA A 1 6 ? 18.223 12.467 1.699 1.00 5.48 ? 6 DA A N7 1
ATOM 124 C C5 . DA A 1 6 ? 16.844 12.557 1.606 1.00 5.37 ? 6 DA A C5 1
ATOM 125 C C6 . DA A 1 6 ? 15.991 13.656 1.494 1.00 4.94 ? 6 DA A C6 1
ATOM 126 N N6 . DA A 1 6 ? 16.412 14.907 1.476 1.00 5.86 ? 6 DA A N6 1
ATOM 127 N N1 . DA A 1 6 ? 14.701 13.389 1.410 1.00 5.00 ? 6 DA A N1 1
ATOM 128 C C2 . DA A 1 6 ? 14.269 12.129 1.436 1.00 4.96 ? 6 DA A C2 1
ATOM 129 N N3 . DA A 1 6 ? 14.970 11.014 1.543 1.00 5.98 ? 6 DA A N3 1
ATOM 130 C C4 . DA A 1 6 ? 16.278 11.324 1.626 1.00 4.52 ? 6 DA A C4 1
ATOM 131 H "HO3'" . DA A 1 6 ? 16.833 6.386 1.636 1.00 10.00 ? 6 DA A "HO3'" 1
ATOM 132 H H61 . DA A 1 6 ? 17.399 15.115 1.520 1.00 10.00 ? 6 DA A H61 1
ATOM 133 H H62 . DA A 1 6 ? 15.739 15.656 1.410 1.00 10.00 ? 6 DA A H62 1
HETATM 134 C C1 . DM7 B 2 . ? 15.292 18.323 4.975 1.00 14.87 ? 7 DM7 A C1 1
HETATM 135 C C2 . DM7 B 2 . ? 16.455 19.102 4.998 1.00 14.28 ? 7 DM7 A C2 1
HETATM 136 C C3 . DM7 B 2 . ? 17.686 18.412 4.988 1.00 14.61 ? 7 DM7 A C3 1
HETATM 137 C C4 . DM7 B 2 . ? 17.785 17.026 4.944 1.00 12.52 ? 7 DM7 A C4 1
HETATM 138 C C5 . DM7 B 2 . ? 16.544 14.852 4.888 1.00 10.18 ? 7 DM7 A C5 1
HETATM 139 C C6 . DM7 B 2 . ? 15.321 12.719 4.847 1.00 10.35 ? 7 DM7 A C6 1
HETATM 140 C C7 . DM7 B 2 . ? 14.118 10.558 4.838 1.00 10.37 ? 7 DM7 A C7 1
HETATM 141 C C8 . DM7 B 2 . ? 12.875 9.796 4.620 1.00 12.40 ? 7 DM7 A C8 1
HETATM 142 C C9 . DM7 B 2 . ? 11.752 10.484 5.481 1.00 12.82 ? 7 DM7 A C9 1
HETATM 143 C C10 . DM7 B 2 . ? 11.625 11.925 4.851 1.00 12.63 ? 7 DM7 A C10 1
HETATM 144 C C11 . DM7 B 2 . ? 12.924 14.080 4.881 1.00 10.18 ? 7 DM7 A C11 1
HETATM 145 C C12 . DM7 B 2 . ? 14.169 16.204 4.925 1.00 10.61 ? 7 DM7 A C12 1
HETATM 146 C C13 . DM7 B 2 . ? 10.454 9.678 5.186 1.00 13.47 ? 7 DM7 A C13 1
HETATM 147 C C14 . DM7 B 2 . ? 10.036 8.543 6.005 1.00 14.82 ? 7 DM7 A C14 1
HETATM 148 C C15 . DM7 B 2 . ? 15.376 16.905 4.938 1.00 12.32 ? 7 DM7 A C15 1
HETATM 149 C C16 . DM7 B 2 . ? 16.598 16.242 4.919 1.00 11.91 ? 7 DM7 A C16 1
HETATM 150 C C17 . DM7 B 2 . ? 15.348 14.119 4.874 1.00 9.33 ? 7 DM7 A C17 1
HETATM 151 C C18 . DM7 B 2 . ? 14.128 14.796 4.893 1.00 9.68 ? 7 DM7 A C18 1
HETATM 152 C C19 . DM7 B 2 . ? 14.081 12.025 4.845 1.00 10.20 ? 7 DM7 A C19 1
HETATM 153 C C20 . DM7 B 2 . ? 12.871 12.695 4.863 1.00 10.69 ? 7 DM7 A C20 1
HETATM 154 C C21 . DM7 B 2 . ? 20.309 17.125 4.968 1.00 13.66 ? 7 DM7 A C21 1
HETATM 155 O O4 . DM7 B 2 . ? 19.044 16.419 4.932 1.00 12.75 ? 7 DM7 A O4 1
HETATM 156 O O5 . DM7 B 2 . ? 17.715 14.129 4.851 1.00 8.26 ? 7 DM7 A O5 1
HETATM 157 O O6 . DM7 B 2 . ? 16.489 11.936 4.829 1.00 10.42 ? 7 DM7 A O6 1
HETATM 158 O O7 . DM7 B 2 . ? 14.661 10.228 6.051 1.00 11.88 ? 7 DM7 A O7 1
HETATM 159 O O9 . DM7 B 2 . ? 11.719 10.671 6.984 1.00 13.78 ? 7 DM7 A O9 1
HETATM 160 O O11 . DM7 B 2 . ? 11.699 14.742 4.911 1.00 9.19 ? 7 DM7 A O11 1
HETATM 161 O O12 . DM7 B 2 . ? 13.032 16.918 4.926 1.00 11.91 ? 7 DM7 A O12 1
HETATM 162 O O13 . DM7 B 2 . ? 9.759 10.014 3.997 1.00 14.94 ? 7 DM7 A O13 1
HETATM 163 O O14 . DM7 B 2 . ? 8.637 8.320 5.874 1.00 13.91 ? 7 DM7 A O14 1
HETATM 164 C "C1'" . DM7 B 2 . ? 15.421 9.131 6.475 1.00 12.86 ? 7 DM7 A "C1'" 1
HETATM 165 C "C2'" . DM7 B 2 . ? 16.558 9.506 7.478 1.00 13.20 ? 7 DM7 A "C2'" 1
HETATM 166 C "C3'" . DM7 B 2 . ? 15.948 9.766 8.845 1.00 12.80 ? 7 DM7 A "C3'" 1
HETATM 167 C "C4'" . DM7 B 2 . ? 15.085 8.526 9.276 1.00 12.82 ? 7 DM7 A "C4'" 1
HETATM 168 C "C5'" . DM7 B 2 . ? 13.979 8.327 8.176 1.00 12.82 ? 7 DM7 A "C5'" 1
HETATM 169 C "C6'" . DM7 B 2 . ? 12.954 7.170 8.454 1.00 11.61 ? 7 DM7 A "C6'" 1
HETATM 170 O "O5'" . DM7 B 2 . ? 14.613 8.050 6.919 1.00 13.70 ? 7 DM7 A "O5'" 1
HETATM 171 N "N3'" . DM7 B 2 . ? 17.086 9.908 9.770 1.00 14.34 ? 7 DM7 A "N3'" 1
HETATM 172 I "I4'" . DM7 B 2 . ? 16.203 6.722 9.707 1.00 14.63 ? 7 DM7 A "I4'" 1
HETATM 173 O O . HOH C 3 . ? 15.926 5.674 6.114 1.00 28.43 ? 8 HOH A O 1
HETATM 174 O O . HOH C 3 . ? 8.683 6.088 4.050 1.00 37.88 ? 9 HOH A O 1
HETATM 175 O O . HOH C 3 . ? 17.332 21.185 13.319 1.00 24.32 ? 10 HOH A O 1
HETATM 176 O O . HOH C 3 . ? 20.239 24.665 16.749 1.00 29.56 ? 11 HOH A O 1
HETATM 177 O O . HOH C 3 . ? 8.962 23.887 20.525 1.00 32.64 ? 12 HOH A O 1
HETATM 178 O O . HOH C 3 . ? 26.118 16.125 13.365 1.00 29.81 ? 13 HOH A O 1
HETATM 179 O O . HOH C 3 . ? 20.410 19.113 10.902 1.00 23.78 ? 14 HOH A O 1
HETATM 180 O O . HOH C 3 . ? 22.504 15.436 7.760 1.00 19.77 ? 15 HOH A O 1
HETATM 181 O O . HOH C 3 . ? 18.124 4.488 12.797 1.00 40.47 ? 16 HOH A O 1
HETATM 182 O O . HOH C 3 . ? 8.840 12.139 24.883 1.00 17.29 ? 17 HOH A O 1
HETATM 183 O O . HOH C 3 . ? 13.546 8.506 1.374 1.00 17.03 ? 18 HOH A O 1
HETATM 184 O O . HOH C 3 . ? 6.098 12.725 23.643 1.00 26.28 ? 19 HOH A O 1
HETATM 185 O O . HOH C 3 . ? 9.601 20.497 15.503 1.00 36.38 ? 20 HOH A O 1
HETATM 186 O O . HOH C 3 . ? 10.580 17.604 14.532 1.00 25.53 ? 21 HOH A O 1
HETATM 187 O O . HOH C 3 . ? 8.003 14.390 17.611 1.00 38.14 ? 22 HOH A O 1
HETATM 188 O O . HOH C 3 . ? 19.398 8.636 10.425 1.00 17.23 ? 23 HOH A O 1
HETATM 189 O O . HOH C 3 . ? 18.227 7.604 13.518 1.00 23.26 ? 24 HOH A O 1
HETATM 190 O O . HOH C 3 . ? 16.565 9.576 12.694 1.00 11.06 ? 25 HOH A O 1
HETATM 191 O O . HOH C 3 . ? 23.856 8.240 9.717 1.00 29.97 ? 26 HOH A O 1
HETATM 192 O O . HOH C 3 . ? 22.925 14.556 4.825 1.00 31.80 ? 27 HOH A O 1
HETATM 193 O O . HOH C 3 . ? 19.771 14.373 2.708 1.00 18.27 ? 28 HOH A O 1
HETATM 194 O O . HOH C 3 . ? 10.640 19.289 5.631 1.00 21.77 ? 29 HOH A O 1
HETATM 195 O O . HOH C 3 . ? 18.662 5.230 6.790 1.00 19.40 ? 30 HOH A O 1
HETATM 196 O O . HOH C 3 . ? 23.721 17.291 4.410 1.00 32.28 ? 31 HOH A O 1
HETATM 197 O O . HOH C 3 . ? 16.433 19.056 11.731 1.00 17.44 ? 32 HOH A O 1
HETATM 198 O O . HOH C 3 . ? 22.027 17.949 8.426 1.00 23.00 ? 33 HOH A O 1
HETATM 199 O O . HOH C 3 . ? 18.470 18.604 -1.603 1.00 30.78 ? 34 HOH A O 1
HETATM 200 O O . HOH C 3 . ? 11.385 22.492 19.180 1.00 17.73 ? 35 HOH A O 1
HETATM 201 O O . HOH C 3 . ? 15.594 23.367 12.381 1.00 38.55 ? 36 HOH A O 1
HETATM 202 O O . HOH C 3 . ? 13.058 23.650 15.622 1.00 41.69 ? 37 HOH A O 1
HETATM 203 O O . HOH C 3 . ? 24.837 12.866 14.829 1.00 35.08 ? 38 HOH A O 1
HETATM 204 O O . HOH C 3 . ? 7.210 19.031 24.519 1.00 28.82 ? 39 HOH A O 1
HETATM 205 O O . HOH C 3 . ? 8.586 21.342 19.771 1.00 33.91 ? 40 HOH A O 1
HETATM 206 O O . HOH C 3 . ? 11.649 5.925 4.059 1.00 35.12 ? 41 HOH A O 1
HETATM 207 O O . HOH C 3 . ? 5.589 14.712 21.530 1.00 34.64 ? 42 HOH A O 1
HETATM 208 O O . HOH C 3 . ? 8.474 17.757 18.075 1.00 37.83 ? 43 HOH A O 1
HETATM 209 O O . HOH C 3 . ? 14.976 23.262 26.092 1.00 35.47 ? 44 HOH A O 1
HETATM 210 O O . HOH C 3 . ? 10.674 9.830 1.393 1.00 28.98 ? 45 HOH A O 1
HETATM 211 O O . HOH C 3 . ? 24.202 8.973 6.738 1.00 30.41 ? 46 HOH A O 1
HETATM 212 O O . HOH C 3 . ? 20.475 6.843 7.802 1.00 32.20 ? 47 HOH A O 1
HETATM 213 O O . HOH C 3 . ? 17.228 20.101 8.765 1.00 35.60 ? 48 HOH A O 1
HETATM 214 O O . HOH C 3 . ? 24.741 11.266 5.533 1.00 40.27 ? 49 HOH A O 1
HETATM 215 O O . HOH C 3 . ? 13.670 19.850 11.551 1.00 30.70 ? 50 HOH A O 1
HETATM 216 O O . HOH C 3 . ? 5.165 8.140 5.975 1.00 33.91 ? 51 HOH A O 1
HETATM 217 O O . HOH C 3 . ? 17.391 3.050 3.402 1.00 41.45 ? 52 HOH A O 1
HETATM 218 O O . HOH C 3 . ? 15.457 25.406 17.717 1.00 40.02 ? 53 HOH A O 1
HETATM 219 O O . HOH C 3 . ? 10.432 24.867 22.451 1.00 38.22 ? 54 HOH A O 1
HETATM 220 O O . HOH C 3 . ? 18.272 26.193 15.424 1.00 32.88 ? 55 HOH A O 1
HETATM 221 O O . HOH C 3 . ? 15.254 4.609 2.361 1.00 44.28 ? 56 HOH A O 1
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