HEADER DNA 21-JUN-00 1F6J
TITLE CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGBR5CC
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA (5'-D(*GP*GP*CP*GP*(CBR)P*C)-3');
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS E-DNA, DOUBLE HELIX, METHYLATION, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR J.M.VARGASON,B.F.EICHMAN,P.S.HO
REVDAT 4 07-FEB-24 1F6J 1 LINK
REVDAT 3 24-FEB-09 1F6J 1 VERSN
REVDAT 2 28-SEP-00 1F6J 1 JRNL
REVDAT 1 28-AUG-00 1F6J 0
JRNL AUTH J.M.VARGASON,B.F.EICHMAN,P.S.HO
JRNL TITL THE EXTENDED AND ECCENTRIC E-DNA STRUCTURE INDUCED BY
JRNL TITL 2 CYTOSINE METHYLATION OR BROMINATION.
JRNL REF NAT.STRUCT.BIOL. V. 7 758 2000
JRNL REFN ISSN 1072-8368
JRNL PMID 10966645
JRNL DOI 10.1038/78985
REMARK 2
REMARK 2 RESOLUTION. 2.25 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.851
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 2324
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING SET) : 0.193
REMARK 3 FREE R VALUE : 0.256
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700
REMARK 3 FREE R VALUE TEST SET COUNT : 226
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 242
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 28
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 36.30
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.004
REMARK 3 BOND ANGLES (DEGREES) : 0.900
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1F6J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000011304.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 05-MAR-99
REMARK 200 TEMPERATURE (KELVIN) : 298
REMARK 200 PH : 6.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK
REMARK 200 DATA SCALING SOFTWARE : D*TREK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2393
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250
REMARK 200 RESOLUTION RANGE LOW (A) : 500.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 12.90
REMARK 200 R MERGE (I) : 0.05000
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : 39.3000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 12.00
REMARK 200 R MERGE FOR SHELL (I) : 0.34700
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: AMORE
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 58.37
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: MGCL2, SPERMINE, SODIUM CACODYLATE, PH
REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.35200
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.20000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.20000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.52800
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.20000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.20000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 6.17600
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.20000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.20000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.52800
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.20000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.20000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 6.17600
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 12.35200
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1F69 RELATED DB: PDB
REMARK 900 B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE
REMARK 900 RELATED ID: 1F6C RELATED DB: PDB
REMARK 900 B-DNA HEXAMER GGCGCC WITH SPERMINE
REMARK 900 RELATED ID: 1F6E RELATED DB: PDB
REMARK 900 A-DNA HEXAMER GGCGM5CC
REMARK 900 RELATED ID: 1F6I RELATED DB: PDB
REMARK 900 E-DNA HEXAMER GGCGM5CC
DBREF 1F6J A 1 6 PDB 1F6J 1F6J 1 6
DBREF 1F6J B 7 12 PDB 1F6J 1F6J 7 12
SEQRES 1 A 6 DG DG DC DG CBR DC
SEQRES 1 B 6 DG DG DC DG CBR DC
MODRES 1F6J CBR A 5 DC
MODRES 1F6J CBR B 11 DC
HET CBR A 5 20
HET CBR B 11 20
HETNAM CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
FORMUL 1 CBR 2(C9 H13 BR N3 O7 P)
FORMUL 3 HOH *28(H2 O)
LINK O3' DG A 4 P CBR A 5 1555 1555 1.61
LINK O3' CBR A 5 P DC A 6 1555 1555 1.60
LINK O3' DG B 10 P CBR B 11 1555 1555 1.60
LINK O3' CBR B 11 P DC B 12 1555 1555 1.60
CRYST1 60.400 60.400 24.704 90.00 90.00 90.00 P 43 21 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016556 0.000000 0.000000 0.00000
SCALE2 0.000000 0.016556 0.000000 0.00000
SCALE3 0.000000 0.000000 0.040479 0.00000
ATOM 1 O5' DG A 1 59.791 12.151 -3.764 1.00 70.93 O
ATOM 2 C5' DG A 1 60.991 12.096 -4.542 1.00 62.88 C
ATOM 3 C4' DG A 1 62.183 12.593 -3.755 1.00 59.18 C
ATOM 4 O4' DG A 1 62.795 13.700 -4.453 1.00 58.31 O
ATOM 5 C3' DG A 1 61.833 13.126 -2.370 1.00 55.39 C
ATOM 6 O3' DG A 1 61.938 12.077 -1.397 1.00 56.19 O
ATOM 7 C2' DG A 1 62.926 14.149 -2.148 1.00 56.40 C
ATOM 8 C1' DG A 1 63.076 14.750 -3.536 1.00 56.09 C
ATOM 9 N9 DG A 1 62.130 15.830 -3.790 1.00 55.89 N
ATOM 10 C8 DG A 1 61.079 15.830 -4.675 1.00 55.24 C
ATOM 11 N7 DG A 1 60.400 16.945 -4.664 1.00 53.67 N
ATOM 12 C5 DG A 1 61.044 17.729 -3.717 1.00 52.95 C
ATOM 13 C6 DG A 1 60.767 19.044 -3.269 1.00 49.31 C
ATOM 14 O6 DG A 1 59.864 19.808 -3.631 1.00 47.86 O
ATOM 15 N1 DG A 1 61.672 19.452 -2.295 1.00 47.49 N
ATOM 16 C2 DG A 1 62.712 18.694 -1.815 1.00 46.08 C
ATOM 17 N2 DG A 1 63.474 19.260 -0.871 1.00 42.13 N
ATOM 18 N3 DG A 1 62.984 17.472 -2.227 1.00 50.46 N
ATOM 19 C4 DG A 1 62.115 17.054 -3.171 1.00 54.20 C
ATOM 20 P DG A 2 60.988 12.095 -0.102 1.00 58.74 P
ATOM 21 OP1 DG A 2 61.133 10.808 0.622 1.00 61.28 O
ATOM 22 OP2 DG A 2 59.646 12.534 -0.559 1.00 61.50 O
ATOM 23 O5' DG A 2 61.609 13.236 0.819 1.00 55.39 O
ATOM 24 C5' DG A 2 62.967 13.150 1.272 1.00 51.12 C
ATOM 25 C4' DG A 2 63.344 14.403 2.029 1.00 50.64 C
ATOM 26 O4' DG A 2 63.406 15.538 1.139 1.00 50.02 O
ATOM 27 C3' DG A 2 62.341 14.790 3.106 1.00 51.74 C
ATOM 28 O3' DG A 2 62.665 14.137 4.339 1.00 52.82 O
ATOM 29 C2' DG A 2 62.584 16.280 3.229 1.00 53.70 C
ATOM 30 C1' DG A 2 62.876 16.691 1.792 1.00 50.31 C
ATOM 31 N9 DG A 2 61.689 17.127 1.061 1.00 47.01 N
ATOM 32 C8 DG A 2 60.939 16.401 0.164 1.00 44.41 C
ATOM 33 N7 DG A 2 59.932 17.072 -0.324 1.00 39.17 N
ATOM 34 C5 DG A 2 60.022 18.316 0.284 1.00 38.51 C
ATOM 35 C6 DG A 2 59.206 19.468 0.147 1.00 35.46 C
ATOM 36 O6 DG A 2 58.217 19.629 -0.576 1.00 34.43 O
ATOM 37 N1 DG A 2 59.649 20.510 0.956 1.00 35.55 N
ATOM 38 C2 DG A 2 60.746 20.457 1.782 1.00 35.59 C
ATOM 39 N2 DG A 2 61.014 21.571 2.479 1.00 32.70 N
ATOM 40 N3 DG A 2 61.521 19.392 1.914 1.00 37.80 N
ATOM 41 C4 DG A 2 61.101 18.365 1.143 1.00 40.69 C
ATOM 42 P DC A 3 61.575 14.079 5.516 1.00 54.41 P
ATOM 43 OP1 DC A 3 62.281 13.719 6.773 1.00 54.03 O
ATOM 44 OP2 DC A 3 60.431 13.258 5.047 1.00 54.95 O
ATOM 45 O5' DC A 3 61.070 15.581 5.655 1.00 56.33 O
ATOM 46 C5' DC A 3 61.895 16.564 6.290 1.00 55.06 C
ATOM 47 C4' DC A 3 61.113 17.836 6.520 1.00 55.17 C
ATOM 48 O4' DC A 3 60.835 18.503 5.275 1.00 54.06 O
ATOM 49 C3' DC A 3 59.757 17.676 7.189 1.00 54.27 C
ATOM 50 O3' DC A 3 59.907 17.629 8.614 1.00 57.70 O
ATOM 51 C2' DC A 3 59.085 18.979 6.808 1.00 53.93 C
ATOM 52 C1' DC A 3 59.685 19.326 5.448 1.00 53.67 C
ATOM 53 N1 DC A 3 58.757 19.068 4.346 1.00 50.38 N
ATOM 54 C2 DC A 3 57.878 20.080 3.987 1.00 49.27 C
ATOM 55 O2 DC A 3 57.954 21.165 4.579 1.00 48.20 O
ATOM 56 N3 DC A 3 56.972 19.860 3.008 1.00 51.40 N
ATOM 57 C4 DC A 3 56.939 18.680 2.388 1.00 51.08 C
ATOM 58 N4 DC A 3 56.019 18.501 1.436 1.00 50.82 N
ATOM 59 C5 DC A 3 57.845 17.630 2.721 1.00 52.65 C
ATOM 60 C6 DC A 3 58.732 17.867 3.697 1.00 50.59 C
ATOM 61 P DG A 4 58.619 17.826 9.558 1.00 58.84 P
ATOM 62 OP1 DG A 4 59.038 17.579 10.962 1.00 60.77 O
ATOM 63 OP2 DG A 4 57.499 17.040 8.970 1.00 60.08 O
ATOM 64 O5' DG A 4 58.251 19.372 9.421 1.00 57.41 O
ATOM 65 C5' DG A 4 56.994 19.872 9.924 1.00 50.21 C
ATOM 66 C4' DG A 4 56.817 21.329 9.561 1.00 42.05 C
ATOM 67 O4' DG A 4 57.032 21.504 8.146 1.00 36.56 O
ATOM 68 C3' DG A 4 55.405 21.837 9.827 1.00 40.74 C
ATOM 69 O3' DG A 4 55.330 22.434 11.127 1.00 46.40 O
ATOM 70 C2' DG A 4 55.227 22.889 8.752 1.00 35.13 C
ATOM 71 C1' DG A 4 55.986 22.285 7.584 1.00 31.82 C
ATOM 72 N9 DG A 4 55.198 21.415 6.719 1.00 27.42 N
ATOM 73 C8 DG A 4 55.437 20.092 6.440 1.00 25.26 C
ATOM 74 N7 DG A 4 54.576 19.582 5.602 1.00 28.43 N
ATOM 75 C5 DG A 4 53.713 20.632 5.313 1.00 25.57 C
ATOM 76 C6 DG A 4 52.574 20.685 4.462 1.00 27.05 C
ATOM 77 O6 DG A 4 52.092 19.790 3.757 1.00 26.00 O
ATOM 78 N1 DG A 4 51.989 21.945 4.469 1.00 26.01 N
ATOM 79 C2 DG A 4 52.442 23.018 5.194 1.00 25.45 C
ATOM 80 N2 DG A 4 51.750 24.153 5.058 1.00 27.56 N
ATOM 81 N3 DG A 4 53.496 22.983 5.989 1.00 27.43 N
ATOM 82 C4 DG A 4 54.080 21.767 6.001 1.00 25.07 C
HETATM 83 BR CBR A 5 51.945 20.100 8.504 1.00 47.34 BR
HETATM 84 P CBR A 5 53.925 22.469 11.903 1.00 44.00 P
HETATM 85 OP1 CBR A 5 54.118 23.167 13.197 1.00 54.62 O
HETATM 86 OP2 CBR A 5 53.402 21.083 11.888 1.00 49.89 O
HETATM 87 O5' CBR A 5 52.989 23.377 10.989 1.00 47.54 O
HETATM 88 N1 CBR A 5 50.254 23.817 8.128 1.00 38.44 N
HETATM 89 C6 CBR A 5 51.060 22.785 8.514 1.00 37.04 C
HETATM 90 C2 CBR A 5 49.206 23.597 7.244 1.00 34.14 C
HETATM 91 O2 CBR A 5 48.462 24.540 6.957 1.00 40.47 O
HETATM 92 N3 CBR A 5 49.019 22.367 6.732 1.00 35.48 N
HETATM 93 C4 CBR A 5 49.826 21.371 7.091 1.00 37.54 C
HETATM 94 N4 CBR A 5 49.619 20.176 6.541 1.00 43.30 N
HETATM 95 C5 CBR A 5 50.881 21.559 8.024 1.00 34.88 C
HETATM 96 C2' CBR A 5 49.814 25.481 9.940 1.00 46.90 C
HETATM 97 C5' CBR A 5 53.370 24.718 10.640 1.00 44.44 C
HETATM 98 C4' CBR A 5 52.150 25.515 10.239 1.00 44.82 C
HETATM 99 O4' CBR A 5 51.891 25.330 8.833 1.00 45.80 O
HETATM 100 C1' CBR A 5 50.490 25.180 8.615 1.00 41.28 C
HETATM 101 C3' CBR A 5 50.876 25.071 10.938 1.00 48.04 C
HETATM 102 O3' CBR A 5 50.685 25.796 12.152 1.00 53.25 O
ATOM 103 P DC A 6 49.541 25.323 13.172 1.00 56.79 P
ATOM 104 OP1 DC A 6 49.420 26.371 14.220 1.00 58.77 O
ATOM 105 OP2 DC A 6 49.802 23.907 13.558 1.00 52.89 O
ATOM 106 O5' DC A 6 48.214 25.324 12.292 1.00 55.27 O
ATOM 107 C5' DC A 6 47.227 24.292 12.453 1.00 48.98 C
ATOM 108 C4' DC A 6 46.061 24.545 11.527 1.00 45.18 C
ATOM 109 O4' DC A 6 46.472 24.303 10.166 1.00 43.36 O
ATOM 110 C3' DC A 6 44.881 23.614 11.767 1.00 45.72 C
ATOM 111 O3' DC A 6 43.997 24.228 12.699 1.00 53.68 O
ATOM 112 C2' DC A 6 44.252 23.539 10.391 1.00 45.05 C
ATOM 113 C1' DC A 6 45.460 23.584 9.471 1.00 40.92 C
ATOM 114 N1 DC A 6 45.996 22.259 9.130 1.00 36.05 N
ATOM 115 C2 DC A 6 45.417 21.563 8.071 1.00 33.49 C
ATOM 116 O2 DC A 6 44.453 22.074 7.483 1.00 34.64 O
ATOM 117 N3 DC A 6 45.915 20.354 7.719 1.00 31.60 N
ATOM 118 C4 DC A 6 46.941 19.835 8.398 1.00 33.31 C
ATOM 119 N4 DC A 6 47.407 18.643 8.014 1.00 31.47 N
ATOM 120 C5 DC A 6 47.539 20.518 9.500 1.00 31.52 C
ATOM 121 C6 DC A 6 47.041 21.718 9.827 1.00 32.44 C
TER 122 DC A 6
ATOM 123 O5' DG B 7 42.336 14.804 0.255 1.00 55.10 O
ATOM 124 C5' DG B 7 41.013 15.151 -0.151 1.00 46.26 C
ATOM 125 C4' DG B 7 40.553 16.443 0.484 1.00 45.46 C
ATOM 126 O4' DG B 7 40.517 16.301 1.918 1.00 45.65 O
ATOM 127 C3' DG B 7 41.463 17.633 0.237 1.00 47.52 C
ATOM 128 O3' DG B 7 41.189 18.269 -1.014 1.00 52.97 O
ATOM 129 C2' DG B 7 41.081 18.534 1.392 1.00 44.57 C
ATOM 130 C1' DG B 7 40.940 17.524 2.521 1.00 40.11 C
ATOM 131 N9 DG B 7 42.200 17.274 3.212 1.00 32.84 N
ATOM 132 C8 DG B 7 43.017 16.176 3.096 1.00 30.93 C
ATOM 133 N7 DG B 7 44.080 16.246 3.852 1.00 29.98 N
ATOM 134 C5 DG B 7 43.956 17.465 4.505 1.00 27.07 C
ATOM 135 C6 DG B 7 44.804 18.090 5.449 1.00 28.06 C
ATOM 136 O6 DG B 7 45.874 17.677 5.920 1.00 31.57 O
ATOM 137 N1 DG B 7 44.300 19.322 5.851 1.00 28.01 N
ATOM 138 C2 DG B 7 43.126 19.878 5.403 1.00 28.62 C
ATOM 139 N2 DG B 7 42.796 21.070 5.916 1.00 30.23 N
ATOM 140 N3 DG B 7 42.330 19.306 4.521 1.00 29.95 N
ATOM 141 C4 DG B 7 42.803 18.111 4.118 1.00 29.48 C
ATOM 142 P DG B 8 42.370 19.051 -1.773 1.00 51.30 P
ATOM 143 OP1 DG B 8 41.892 19.358 -3.145 1.00 54.72 O
ATOM 144 OP2 DG B 8 43.636 18.284 -1.579 1.00 46.34 O
ATOM 145 O5' DG B 8 42.477 20.422 -0.978 1.00 45.70 O
ATOM 146 C5' DG B 8 41.367 21.327 -0.941 1.00 45.51 C
ATOM 147 C4' DG B 8 41.654 22.446 0.031 1.00 48.99 C
ATOM 148 O4' DG B 8 41.844 21.891 1.349 1.00 48.16 O
ATOM 149 C3' DG B 8 42.943 23.197 -0.263 1.00 51.86 C
ATOM 150 O3' DG B 8 42.734 24.242 -1.223 1.00 55.09 O
ATOM 151 C2' DG B 8 43.263 23.773 1.101 1.00 49.23 C
ATOM 152 C1' DG B 8 42.833 22.652 2.039 1.00 42.77 C
ATOM 153 N9 DG B 8 43.928 21.761 2.398 1.00 37.22 N
ATOM 154 C8 DG B 8 44.209 20.510 1.902 1.00 34.76 C
ATOM 155 N7 DG B 8 45.279 19.980 2.435 1.00 31.74 N
ATOM 156 C5 DG B 8 45.726 20.942 3.335 1.00 32.35 C
ATOM 157 C6 DG B 8 46.845 20.944 4.210 1.00 32.55 C
ATOM 158 O6 DG B 8 47.702 20.069 4.371 1.00 34.63 O
ATOM 159 N1 DG B 8 46.918 22.122 4.945 1.00 32.02 N
ATOM 160 C2 DG B 8 46.032 23.167 4.850 1.00 34.82 C
ATOM 161 N2 DG B 8 46.264 24.226 5.644 1.00 36.34 N
ATOM 162 N3 DG B 8 44.992 23.178 4.040 1.00 34.48 N
ATOM 163 C4 DG B 8 44.901 22.043 3.320 1.00 35.01 C
ATOM 164 P DC B 9 43.883 24.570 -2.300 1.00 55.49 P
ATOM 165 OP1 DC B 9 43.272 25.377 -3.391 1.00 58.42 O
ATOM 166 OP2 DC B 9 44.623 23.318 -2.635 1.00 46.01 O
ATOM 167 O5' DC B 9 44.869 25.518 -1.492 1.00 50.66 O
ATOM 168 C5' DC B 9 46.108 25.019 -0.996 1.00 45.54 C
ATOM 169 C4' DC B 9 46.640 25.950 0.067 1.00 43.49 C
ATOM 170 O4' DC B 9 46.444 25.334 1.356 1.00 42.12 O
ATOM 171 C3' DC B 9 48.142 26.177 -0.060 1.00 44.06 C
ATOM 172 O3' DC B 9 48.376 27.396 -0.778 1.00 46.09 O
ATOM 173 C2' DC B 9 48.569 26.311 1.386 1.00 42.28 C
ATOM 174 C1' DC B 9 47.687 25.259 2.033 1.00 40.95 C
ATOM 175 N1 DC B 9 48.204 23.899 1.852 1.00 35.66 N
ATOM 176 C2 DC B 9 49.210 23.451 2.697 1.00 34.79 C
ATOM 177 O2 DC B 9 49.644 24.219 3.567 1.00 38.55 O
ATOM 178 N3 DC B 9 49.687 22.199 2.552 1.00 34.45 N
ATOM 179 C4 DC B 9 49.195 21.407 1.603 1.00 32.12 C
ATOM 180 N4 DC B 9 49.693 20.171 1.509 1.00 34.77 N
ATOM 181 C5 DC B 9 48.170 21.843 0.715 1.00 29.90 C
ATOM 182 C6 DC B 9 47.707 23.087 0.874 1.00 31.09 C
ATOM 183 P DG B 10 49.574 27.473 -1.845 1.00 47.73 P
ATOM 184 OP1 DG B 10 49.417 28.754 -2.580 1.00 50.44 O
ATOM 185 OP2 DG B 10 49.639 26.197 -2.600 1.00 40.41 O
ATOM 186 O5' DG B 10 50.878 27.556 -0.933 1.00 44.49 O
ATOM 187 C5' DG B 10 51.011 28.592 0.050 1.00 35.11 C
ATOM 188 C4' DG B 10 51.997 28.180 1.118 1.00 29.07 C
ATOM 189 O4' DG B 10 51.627 26.909 1.678 1.00 28.86 O
ATOM 190 C3' DG B 10 53.434 28.004 0.670 1.00 26.66 C
ATOM 191 O3' DG B 10 54.087 29.276 0.686 1.00 28.28 O
ATOM 192 C2' DG B 10 53.983 27.135 1.783 1.00 24.68 C
ATOM 193 C1' DG B 10 52.792 26.273 2.190 1.00 25.73 C
ATOM 194 N9 DG B 10 52.847 24.921 1.649 1.00 26.45 N
ATOM 195 C8 DG B 10 52.066 24.377 0.658 1.00 23.31 C
ATOM 196 N7 DG B 10 52.391 23.144 0.374 1.00 25.27 N
ATOM 197 C5 DG B 10 53.443 22.857 1.236 1.00 23.14 C
ATOM 198 C6 DG B 10 54.208 21.673 1.400 1.00 25.20 C
ATOM 199 O6 DG B 10 54.113 20.600 0.789 1.00 31.83 O
ATOM 200 N1 DG B 10 55.174 21.821 2.390 1.00 23.03 N
ATOM 201 C2 DG B 10 55.378 22.959 3.127 1.00 21.59 C
ATOM 202 N2 DG B 10 56.360 22.915 4.036 1.00 20.24 N
ATOM 203 N3 DG B 10 54.672 24.062 2.987 1.00 21.65 N
ATOM 204 C4 DG B 10 53.729 23.942 2.031 1.00 24.14 C
HETATM 205 BR CBR B 11 55.358 24.832 -1.283 1.00 34.93 BR
HETATM 206 P CBR B 11 55.489 29.461 -0.069 1.00 23.92 P
HETATM 207 OP1 CBR B 11 55.865 30.892 -0.008 1.00 27.45 O
HETATM 208 OP2 CBR B 11 55.391 28.778 -1.379 1.00 23.87 O
HETATM 209 O5' CBR B 11 56.521 28.648 0.820 1.00 22.32 O
HETATM 210 N1 CBR B 11 58.090 25.036 1.781 1.00 24.82 N
HETATM 211 C6 CBR B 11 57.103 25.353 0.889 1.00 26.54 C
HETATM 212 C2 CBR B 11 58.667 23.768 1.771 1.00 25.68 C
HETATM 213 O2 CBR B 11 59.559 23.514 2.592 1.00 31.03 O
HETATM 214 N3 CBR B 11 58.244 22.852 0.869 1.00 26.14 N
HETATM 215 C4 CBR B 11 57.290 23.172 -0.006 1.00 26.51 C
HETATM 216 N4 CBR B 11 56.918 22.244 -0.887 1.00 25.57 N
HETATM 217 C5 CBR B 11 56.681 24.460 -0.018 1.00 25.82 C
HETATM 218 C2' CBR B 11 59.807 26.779 2.272 1.00 23.46 C
HETATM 219 C5' CBR B 11 56.953 29.156 2.080 1.00 21.97 C
HETATM 220 C4' CBR B 11 58.060 28.287 2.629 1.00 22.42 C
HETATM 221 O4' CBR B 11 57.555 26.985 2.974 1.00 23.56 O
HETATM 222 C1' CBR B 11 58.582 26.015 2.760 1.00 24.05 C
HETATM 223 C3' CBR B 11 59.185 28.011 1.650 1.00 23.82 C
HETATM 224 O3' CBR B 11 60.125 29.082 1.625 1.00 26.34 O
ATOM 225 P DC B 12 61.132 29.200 0.391 1.00 25.53 P
ATOM 226 OP1 DC B 12 62.007 30.373 0.611 1.00 31.33 O
ATOM 227 OP2 DC B 12 60.328 29.096 -0.855 1.00 25.22 O
ATOM 228 O5' DC B 12 62.016 27.890 0.515 1.00 27.61 O
ATOM 229 C5' DC B 12 62.956 27.739 1.578 1.00 23.55 C
ATOM 230 C4' DC B 12 63.796 26.505 1.340 1.00 25.90 C
ATOM 231 O4' DC B 12 62.954 25.340 1.408 1.00 23.33 O
ATOM 232 C3' DC B 12 64.460 26.436 -0.027 1.00 25.62 C
ATOM 233 O3' DC B 12 65.718 27.120 -0.051 1.00 33.88 O
ATOM 234 C2' DC B 12 64.651 24.943 -0.197 1.00 24.67 C
ATOM 235 C1' DC B 12 63.454 24.339 0.529 1.00 23.66 C
ATOM 236 N1 DC B 12 62.359 23.921 -0.356 1.00 24.94 N
ATOM 237 C2 DC B 12 62.389 22.632 -0.874 1.00 27.65 C
ATOM 238 O2 DC B 12 63.341 21.892 -0.575 1.00 26.56 O
ATOM 239 N3 DC B 12 61.389 22.220 -1.687 1.00 26.16 N
ATOM 240 C4 DC B 12 60.391 23.047 -1.986 1.00 20.26 C
ATOM 241 N4 DC B 12 59.434 22.589 -2.791 1.00 22.78 N
ATOM 242 C5 DC B 12 60.336 24.374 -1.473 1.00 18.44 C
ATOM 243 C6 DC B 12 61.331 24.766 -0.668 1.00 21.07 C
TER 244 DC B 12
HETATM 245 O HOH A 23 62.163 22.428 8.399 1.00 66.59 O
HETATM 246 O HOH A 24 42.401 23.947 7.032 1.00 71.37 O
HETATM 247 O HOH A 26 57.177 17.292 -2.544 1.00 95.24 O
HETATM 248 O HOH A 35 60.241 22.247 5.667 1.00 72.99 O
HETATM 249 O HOH A 38 58.595 13.548 2.855 1.00 89.44 O
HETATM 250 O HOH A 40 57.960 21.435 -6.593 1.00 80.32 O
HETATM 251 O HOH B 13 51.170 22.053 -1.990 1.00 59.57 O
HETATM 252 O HOH B 14 46.018 17.364 0.846 1.00 66.20 O
HETATM 253 O HOH B 15 60.086 33.180 1.545 1.00 45.83 O
HETATM 254 O HOH B 16 45.918 14.304 3.758 1.00 73.08 O
HETATM 255 O HOH B 17 48.482 17.661 3.910 1.00 51.22 O
HETATM 256 O HOH B 18 58.009 24.745 -4.243 1.00 39.16 O
HETATM 257 O HOH B 19 58.428 27.470 -1.907 1.00 34.27 O
HETATM 258 O HOH B 20 47.938 27.496 -6.447 1.00 0.00 O
HETATM 259 O HOH B 21 62.348 24.002 4.415 1.00 49.26 O
HETATM 260 O HOH B 22 65.371 29.336 0.109 1.00 40.77 O
HETATM 261 O HOH B 25 66.298 28.969 3.250 1.00 70.29 O
HETATM 262 O HOH B 27 55.098 33.272 -2.656 1.00 90.92 O
HETATM 263 O HOH B 28 58.061 32.888 -0.224 1.00 69.29 O
HETATM 264 O HOH B 29 40.292 20.650 4.522 1.00 55.80 O
HETATM 265 O HOH B 30 64.243 34.308 -0.654 1.00 60.11 O
HETATM 266 O HOH B 31 43.624 21.973 -5.219 1.00 88.14 O
HETATM 267 O HOH B 32 61.997 32.415 -1.368 1.00 50.41 O
HETATM 268 O HOH B 33 64.717 32.156 1.731 1.00 0.00 O
HETATM 269 O HOH B 34 59.181 30.780 -2.669 1.00 47.73 O
HETATM 270 O HOH B 36 45.246 20.629 -1.212 1.00 81.74 O
HETATM 271 O HOH B 37 54.768 21.885 -3.104 1.00 75.37 O
HETATM 272 O HOH B 39 51.607 24.937 -3.030 1.00 68.63 O
CONECT 69 84
CONECT 83 95
CONECT 84 69 85 86 87
CONECT 85 84
CONECT 86 84
CONECT 87 84 97
CONECT 88 89 90 100
CONECT 89 88 95
CONECT 90 88 91 92
CONECT 91 90
CONECT 92 90 93
CONECT 93 92 94 95
CONECT 94 93
CONECT 95 83 89 93
CONECT 96 100 101
CONECT 97 87 98
CONECT 98 97 99 101
CONECT 99 98 100
CONECT 100 88 96 99
CONECT 101 96 98 102
CONECT 102 101 103
CONECT 103 102
CONECT 191 206
CONECT 205 217
CONECT 206 191 207 208 209
CONECT 207 206
CONECT 208 206
CONECT 209 206 219
CONECT 210 211 212 222
CONECT 211 210 217
CONECT 212 210 213 214
CONECT 213 212
CONECT 214 212 215
CONECT 215 214 216 217
CONECT 216 215
CONECT 217 205 211 215
CONECT 218 222 223
CONECT 219 209 220
CONECT 220 219 221 223
CONECT 221 220 222
CONECT 222 210 218 221
CONECT 223 218 220 224
CONECT 224 223 225
CONECT 225 224
MASTER 225 0 2 0 0 0 0 6 270 2 44 2
END