data_1F6I
#
_entry.id 1F6I
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1F6I pdb_00001f6i 10.2210/pdb1f6i/pdb
NDB UD0010 ? ?
RCSB RCSB011303 ? ?
WWPDB D_1000011303 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2000-08-28
2 'Structure model' 1 1 2008-04-27
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1F6I
_pdbx_database_status.recvd_initial_deposition_date 2000-06-21
_pdbx_database_status.deposit_site NDB
_pdbx_database_status.process_site NDB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 1F69 'B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE' unspecified
PDB 1F6C 'B-DNA HEXAMER GGCGCC WITH SPERMINE' unspecified
PDB 1F6E 'A-DNA HEXAMER GGCGM5CC' unspecified
PDB 1F6J 'E-DNA HEXAMER GGCGBR5CC' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Vargason, J.M.' 1
'Eichman, B.F.' 2
'Ho, P.S.' 3
#
_citation.id primary
_citation.title 'The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.'
_citation.journal_abbrev Nat.Struct.Biol.
_citation.journal_volume 7
_citation.page_first 758
_citation.page_last 761
_citation.year 2000
_citation.journal_id_ASTM NSBIEW
_citation.country US
_citation.journal_id_ISSN 1072-8368
_citation.journal_id_CSD 2024
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 10966645
_citation.pdbx_database_id_DOI 10.1038/78985
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Vargason, J.M.' 1 ?
primary 'Eichman, B.F.' 2 ?
primary 'Ho, P.S.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*GP*GP*CP*GP*(5CM)P*C)-3')
;
1824.232 2 ? ? ? ?
2 water nat water 18.015 29 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DC)(DG)(5CM)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GGCGCC
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DG n
1 3 DC n
1 4 DG n
1 5 5CM n
1 6 DC n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG G A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DC 3 3 3 DC C A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 5CM 5 5 5 5CM +C A . n
A 1 6 DC 6 6 6 DC C A . n
B 1 1 DG 1 7 7 DG G B . n
B 1 2 DG 2 8 8 DG G B . n
B 1 3 DC 3 9 9 DC C B . n
B 1 4 DG 4 10 10 DG G B . n
B 1 5 5CM 5 11 11 5CM +C B . n
B 1 6 DC 6 12 12 DC C B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HOH 1 17 17 HOH HOH A .
C 2 HOH 2 19 19 HOH HOH A .
C 2 HOH 3 21 21 HOH HOH A .
C 2 HOH 4 22 22 HOH HOH A .
C 2 HOH 5 30 30 HOH HOH A .
C 2 HOH 6 32 32 HOH HOH A .
C 2 HOH 7 37 37 HOH HOH A .
C 2 HOH 8 40 40 HOH HOH A .
D 2 HOH 1 13 13 HOH HOH B .
D 2 HOH 2 14 14 HOH HOH B .
D 2 HOH 3 15 15 HOH HOH B .
D 2 HOH 4 16 16 HOH HOH B .
D 2 HOH 5 18 18 HOH HOH B .
D 2 HOH 6 20 20 HOH HOH B .
D 2 HOH 7 23 23 HOH HOH B .
D 2 HOH 8 24 24 HOH HOH B .
D 2 HOH 9 25 25 HOH HOH B .
D 2 HOH 10 26 26 HOH HOH B .
D 2 HOH 11 27 27 HOH HOH B .
D 2 HOH 12 28 28 HOH HOH B .
D 2 HOH 13 29 29 HOH HOH B .
D 2 HOH 14 31 31 HOH HOH B .
D 2 HOH 15 33 33 HOH HOH B .
D 2 HOH 16 34 34 HOH HOH B .
D 2 HOH 17 35 35 HOH HOH B .
D 2 HOH 18 36 36 HOH HOH B .
D 2 HOH 19 38 38 HOH HOH B .
D 2 HOH 20 39 39 HOH HOH B .
D 2 HOH 21 41 41 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
AMoRE phasing . ? 1
X-PLOR refinement 3.851 ? 2
DENZO 'data reduction' . ? 3
SCALEPACK 'data scaling' . ? 4
#
_cell.entry_id 1F6I
_cell.length_a 62.058
_cell.length_b 62.058
_cell.length_c 24.336
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 16
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1F6I
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting tetragonal
_symmetry.Int_Tables_number 96
#
_exptl.entry_id 1F6I
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 66.78
_exptl_crystal.density_Matthews 3.70
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.0
_exptl_crystal_grow.pdbx_details 'MGCL2, SPERMINE, SODIUM CACODYLATE, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 'SODIUM CACODYLATE' ? ? ?
1 2 1 SPERMINE ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 2 MGCL2 ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 298
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IV'
_diffrn_detector.pdbx_collection_date 1999-12-02
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU300'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1F6I
_reflns.observed_criterion_sigma_I 0.0
_reflns.observed_criterion_sigma_F 0.0
_reflns.d_resolution_low 500
_reflns.d_resolution_high 2.2
_reflns.number_obs 2571
_reflns.number_all 2571
_reflns.percent_possible_obs 95.7
_reflns.pdbx_Rmerge_I_obs 0.049
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 28.1
_reflns.B_iso_Wilson_estimate 36.2
_reflns.pdbx_redundancy 9.0
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.20
_reflns_shell.d_res_low 2.28
_reflns_shell.percent_possible_all 91.6
_reflns_shell.Rmerge_I_obs 0.513
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy 5.0
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1F6I
_refine.ls_number_reflns_obs 2402
_refine.ls_number_reflns_all 2402
_refine.pdbx_ls_sigma_I 0.0
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.0
_refine.ls_d_res_high 2.2
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.217
_refine.ls_R_factor_all 0.217
_refine.ls_R_factor_R_work 0.21
_refine.ls_R_factor_R_free 0.273
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 10.0
_refine.ls_number_reflns_R_free 241
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'PARKINSON ET AL.'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 240
_refine_hist.pdbx_number_atoms_ligand 2
_refine_hist.number_atoms_solvent 29
_refine_hist.number_atoms_total 271
_refine_hist.d_res_high 2.2
_refine_hist.d_res_low 8.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 0.9 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 1F6I
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1F6I
_struct.title 'CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGM5CC'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1F6I
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'E-DNA, DOUBLE HELIX, METHYLATION, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1F6I
_struct_ref.pdbx_db_accession 1F6I
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1F6I A 1 ? 6 ? 1F6I 1 ? 6 ? 1 6
2 1 1F6I B 1 ? 6 ? 1F6I 7 ? 12 ? 7 12
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DG 4 "O3'" ? ? ? 1_555 A 5CM 5 P ? ? A DG 4 A 5CM 5 1_555 ? ? ? ? ? ? ? 1.604 ? ?
covale2 covale both ? A 5CM 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? A 5CM 5 A DC 6 1_555 ? ? ? ? ? ? ? 1.607 ? ?
covale3 covale both ? B DG 4 "O3'" ? ? ? 1_555 B 5CM 5 P ? ? B DG 10 B 5CM 11 1_555 ? ? ? ? ? ? ? 1.603 ? ?
covale4 covale both ? B 5CM 5 "O3'" ? ? ? 1_555 B DC 6 P ? ? B 5CM 11 B DC 12 1_555 ? ? ? ? ? ? ? 1.601 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B 5CM 5 N3 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B 5CM 5 O2 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B 5CM 5 N4 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A 5CM 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A 5CM 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A 5CM 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A 5CM 5 A 5CM 5 ? DC ?
2 B 5CM 5 B 5CM 11 ? DC ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
5CM N1 N N N 1
5CM C2 C N N 2
5CM N3 N N N 3
5CM C4 C N N 4
5CM C5 C N N 5
5CM C5A C N N 6
5CM C6 C N N 7
5CM O2 O N N 8
5CM N4 N N N 9
5CM "C1'" C N R 10
5CM "C2'" C N N 11
5CM "C3'" C N S 12
5CM "C4'" C N R 13
5CM "O4'" O N N 14
5CM "O3'" O N N 15
5CM "C5'" C N N 16
5CM "O5'" O N N 17
5CM P P N N 18
5CM OP1 O N N 19
5CM OP2 O N N 20
5CM OP3 O N N 21
5CM H5A1 H N N 22
5CM H5A2 H N N 23
5CM H5A3 H N N 24
5CM H6 H N N 25
5CM HN41 H N N 26
5CM HN42 H N N 27
5CM "H1'" H N N 28
5CM "H2'" H N N 29
5CM "H2''" H N N 30
5CM "H3'" H N N 31
5CM "H4'" H N N 32
5CM "HO3'" H N N 33
5CM "H5'" H N N 34
5CM "H5''" H N N 35
5CM HOP2 H N N 36
5CM HOP3 H N N 37
DC OP3 O N N 38
DC P P N N 39
DC OP1 O N N 40
DC OP2 O N N 41
DC "O5'" O N N 42
DC "C5'" C N N 43
DC "C4'" C N R 44
DC "O4'" O N N 45
DC "C3'" C N S 46
DC "O3'" O N N 47
DC "C2'" C N N 48
DC "C1'" C N R 49
DC N1 N N N 50
DC C2 C N N 51
DC O2 O N N 52
DC N3 N N N 53
DC C4 C N N 54
DC N4 N N N 55
DC C5 C N N 56
DC C6 C N N 57
DC HOP3 H N N 58
DC HOP2 H N N 59
DC "H5'" H N N 60
DC "H5''" H N N 61
DC "H4'" H N N 62
DC "H3'" H N N 63
DC "HO3'" H N N 64
DC "H2'" H N N 65
DC "H2''" H N N 66
DC "H1'" H N N 67
DC H41 H N N 68
DC H42 H N N 69
DC H5 H N N 70
DC H6 H N N 71
DG OP3 O N N 72
DG P P N N 73
DG OP1 O N N 74
DG OP2 O N N 75
DG "O5'" O N N 76
DG "C5'" C N N 77
DG "C4'" C N R 78
DG "O4'" O N N 79
DG "C3'" C N S 80
DG "O3'" O N N 81
DG "C2'" C N N 82
DG "C1'" C N R 83
DG N9 N Y N 84
DG C8 C Y N 85
DG N7 N Y N 86
DG C5 C Y N 87
DG C6 C N N 88
DG O6 O N N 89
DG N1 N N N 90
DG C2 C N N 91
DG N2 N N N 92
DG N3 N N N 93
DG C4 C Y N 94
DG HOP3 H N N 95
DG HOP2 H N N 96
DG "H5'" H N N 97
DG "H5''" H N N 98
DG "H4'" H N N 99
DG "H3'" H N N 100
DG "HO3'" H N N 101
DG "H2'" H N N 102
DG "H2''" H N N 103
DG "H1'" H N N 104
DG H8 H N N 105
DG H1 H N N 106
DG H21 H N N 107
DG H22 H N N 108
HOH O O N N 109
HOH H1 H N N 110
HOH H2 H N N 111
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5CM N1 C2 sing N N 1
5CM N1 C6 sing N N 2
5CM N1 "C1'" sing N N 3
5CM C2 N3 sing N N 4
5CM C2 O2 doub N N 5
5CM N3 C4 doub N N 6
5CM C4 C5 sing N N 7
5CM C4 N4 sing N N 8
5CM C5 C5A sing N N 9
5CM C5 C6 doub N N 10
5CM C5A H5A1 sing N N 11
5CM C5A H5A2 sing N N 12
5CM C5A H5A3 sing N N 13
5CM C6 H6 sing N N 14
5CM N4 HN41 sing N N 15
5CM N4 HN42 sing N N 16
5CM "C1'" "C2'" sing N N 17
5CM "C1'" "O4'" sing N N 18
5CM "C1'" "H1'" sing N N 19
5CM "C2'" "C3'" sing N N 20
5CM "C2'" "H2'" sing N N 21
5CM "C2'" "H2''" sing N N 22
5CM "C3'" "C4'" sing N N 23
5CM "C3'" "O3'" sing N N 24
5CM "C3'" "H3'" sing N N 25
5CM "C4'" "O4'" sing N N 26
5CM "C4'" "C5'" sing N N 27
5CM "C4'" "H4'" sing N N 28
5CM "O3'" "HO3'" sing N N 29
5CM "C5'" "O5'" sing N N 30
5CM "C5'" "H5'" sing N N 31
5CM "C5'" "H5''" sing N N 32
5CM "O5'" P sing N N 33
5CM P OP1 doub N N 34
5CM P OP2 sing N N 35
5CM P OP3 sing N N 36
5CM OP2 HOP2 sing N N 37
5CM OP3 HOP3 sing N N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
HOH O H1 sing N N 113
HOH O H2 sing N N 114
#
_ndb_struct_conf_na.entry_id 1F6I
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 B DC 6 1_555 -0.519 -0.052 0.051 -5.274 2.351 3.966 1 A_DG1:DC12_B A 1 ? B 12 ? 19 1
1 A DG 2 1_555 B 5CM 5 1_555 -0.683 -0.180 0.307 -2.272 -14.768 5.915 2 A_DG2:5CM11_B A 2 ? B 11 ? 19 1
1 A DC 3 1_555 B DG 4 1_555 -0.023 -0.237 0.205 -4.108 -0.267 6.065 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1
1 A DG 4 1_555 B DC 3 1_555 -0.174 -0.164 -0.068 -5.460 -7.463 3.134 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1
1 A 5CM 5 1_555 B DG 2 1_555 0.152 -0.338 0.000 -1.119 -10.959 3.656 5 A_5CM5:DG8_B A 5 ? B 8 ? 19 1
1 A DC 6 1_555 B DG 1 1_555 -0.079 -0.179 -0.332 9.487 -4.280 7.510 6 A_DC6:DG7_B A 6 ? B 7 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 B DC 6 1_555 A DG 2 1_555 B 5CM 5 1_555 0.068 -1.919 3.324 -0.754 2.576 30.623 -4.122 -0.276 3.153 4.867
1.424 30.738 1 AA_DG1DG2:5CM11DC12_BB A 1 ? B 12 ? A 2 ? B 11 ?
1 A DG 2 1_555 B 5CM 5 1_555 A DC 3 1_555 B DG 4 1_555 0.857 -2.001 3.327 1.427 4.693 32.067 -4.391 -1.289 3.045 8.433
-2.565 32.430 2 AA_DG2DC3:DG105CM11_BB A 2 ? B 11 ? A 3 ? B 10 ?
1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.557 -2.320 3.568 1.529 -3.261 25.995 -4.117 1.693 3.787 -7.206
-3.378 26.239 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ?
1 A DG 4 1_555 B DC 3 1_555 A 5CM 5 1_555 B DG 2 1_555 -0.932 -1.823 3.318 -1.750 0.732 34.117 -3.221 1.306 3.321 1.247
2.980 34.168 4 AA_DG45CM5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ?
1 A 5CM 5 1_555 B DG 2 1_555 A DC 6 1_555 B DG 1 1_555 0.967 -1.886 3.101 2.240 5.043 20.594 -6.952 -1.793 2.656 13.790
-6.126 21.312 5 AA_5CM5DC6:DG7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ?
#
_atom_sites.entry_id 1F6I
_atom_sites.fract_transf_matrix[1][1] 0.016114
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.016114
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.041091
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? -1.796 12.993 9.554 1.00 82.94 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? -2.829 13.515 10.391 1.00 75.68 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? -4.104 13.773 9.620 1.00 73.56 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? -4.855 14.808 10.298 1.00 72.81 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? -3.866 14.287 8.198 1.00 73.07 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? -4.050 13.224 7.250 1.00 74.98 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? -4.955 15.328 8.028 1.00 71.82 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? -5.026 15.913 9.426 1.00 69.57 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? -3.948 16.857 9.695 1.00 66.12 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? -2.894 16.679 10.555 1.00 67.15 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? -2.058 17.681 10.556 1.00 66.08 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? -2.604 18.582 9.654 1.00 59.14 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? -2.125 19.828 9.217 1.00 51.54 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? -1.110 20.421 9.578 1.00 43.46 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? -2.959 20.390 8.258 1.00 49.58 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? -4.114 19.817 7.787 1.00 51.67 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? -4.779 20.489 6.849 1.00 49.50 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? -4.581 18.657 8.200 1.00 57.90 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? -3.776 18.093 9.123 1.00 62.00 ? 1 DG A C4 1
ATOM 20 P P . DG A 1 2 ? -3.116 13.150 5.940 1.00 73.72 ? 2 DG A P 1
ATOM 21 O OP1 . DG A 1 2 ? -3.480 11.905 5.215 1.00 80.01 ? 2 DG A OP1 1
ATOM 22 O OP2 . DG A 1 2 ? -1.698 13.375 6.337 1.00 77.09 ? 2 DG A OP2 1
ATOM 23 O "O5'" . DG A 1 2 ? -3.597 14.385 5.049 1.00 75.33 ? 2 DG A "O5'" 1
ATOM 24 C "C5'" . DG A 1 2 ? -4.998 14.597 4.783 1.00 68.39 ? 2 DG A "C5'" 1
ATOM 25 C "C4'" . DG A 1 2 ? -5.211 15.876 4.003 1.00 64.64 ? 2 DG A "C4'" 1
ATOM 26 O "O4'" . DG A 1 2 ? -5.173 17.024 4.879 1.00 58.07 ? 2 DG A "O4'" 1
ATOM 27 C "C3'" . DG A 1 2 ? -4.194 16.172 2.907 1.00 61.60 ? 2 DG A "C3'" 1
ATOM 28 O "O3'" . DG A 1 2 ? -4.567 15.538 1.674 1.00 64.04 ? 2 DG A "O3'" 1
ATOM 29 C "C2'" . DG A 1 2 ? -4.335 17.674 2.772 1.00 58.97 ? 2 DG A "C2'" 1
ATOM 30 C "C1'" . DG A 1 2 ? -4.513 18.103 4.221 1.00 57.53 ? 2 DG A "C1'" 1
ATOM 31 N N9 . DG A 1 2 ? -3.230 18.326 4.879 1.00 55.84 ? 2 DG A N9 1
ATOM 32 C C8 . DG A 1 2 ? -2.534 17.465 5.696 1.00 51.82 ? 2 DG A C8 1
ATOM 33 N N7 . DG A 1 2 ? -1.384 17.948 6.083 1.00 45.78 ? 2 DG A N7 1
ATOM 34 C C5 . DG A 1 2 ? -1.330 19.206 5.501 1.00 42.98 ? 2 DG A C5 1
ATOM 35 C C6 . DG A 1 2 ? -0.328 20.190 5.543 1.00 38.85 ? 2 DG A C6 1
ATOM 36 O O6 . DG A 1 2 ? 0.762 20.157 6.129 1.00 35.48 ? 2 DG A O6 1
ATOM 37 N N1 . DG A 1 2 ? -0.686 21.314 4.800 1.00 39.43 ? 2 DG A N1 1
ATOM 38 C C2 . DG A 1 2 ? -1.860 21.462 4.105 1.00 40.06 ? 2 DG A C2 1
ATOM 39 N N2 . DG A 1 2 ? -2.036 22.613 3.449 1.00 45.05 ? 2 DG A N2 1
ATOM 40 N N3 . DG A 1 2 ? -2.797 20.549 4.054 1.00 45.11 ? 2 DG A N3 1
ATOM 41 C C4 . DG A 1 2 ? -2.470 19.455 4.770 1.00 48.25 ? 2 DG A C4 1
ATOM 42 P P . DC A 1 3 ? -3.439 15.219 0.571 1.00 62.11 ? 3 DC A P 1
ATOM 43 O OP1 . DC A 1 3 ? -4.131 14.854 -0.691 1.00 63.56 ? 3 DC A OP1 1
ATOM 44 O OP2 . DC A 1 3 ? -2.417 14.315 1.157 1.00 62.28 ? 3 DC A OP2 1
ATOM 45 O "O5'" . DC A 1 3 ? -2.711 16.608 0.338 1.00 63.54 ? 3 DC A "O5'" 1
ATOM 46 C "C5'" . DC A 1 3 ? -3.360 17.665 -0.376 1.00 57.51 ? 3 DC A "C5'" 1
ATOM 47 C "C4'" . DC A 1 3 ? -2.412 18.830 -0.543 1.00 57.36 ? 3 DC A "C4'" 1
ATOM 48 O "O4'" . DC A 1 3 ? -1.961 19.283 0.747 1.00 51.05 ? 3 DC A "O4'" 1
ATOM 49 C "C3'" . DC A 1 3 ? -1.138 18.509 -1.313 1.00 54.83 ? 3 DC A "C3'" 1
ATOM 50 O "O3'" . DC A 1 3 ? -1.321 18.713 -2.720 1.00 57.74 ? 3 DC A "O3'" 1
ATOM 51 C "C2'" . DC A 1 3 ? -0.178 19.562 -0.792 1.00 55.61 ? 3 DC A "C2'" 1
ATOM 52 C "C1'" . DC A 1 3 ? -0.725 19.967 0.574 1.00 50.00 ? 3 DC A "C1'" 1
ATOM 53 N N1 . DC A 1 3 ? 0.175 19.596 1.669 1.00 43.23 ? 3 DC A N1 1
ATOM 54 C C2 . DC A 1 3 ? 1.209 20.467 1.970 1.00 37.17 ? 3 DC A C2 1
ATOM 55 O O2 . DC A 1 3 ? 1.275 21.538 1.353 1.00 36.39 ? 3 DC A O2 1
ATOM 56 N N3 . DC A 1 3 ? 2.100 20.140 2.915 1.00 35.17 ? 3 DC A N3 1
ATOM 57 C C4 . DC A 1 3 ? 1.974 18.996 3.570 1.00 36.21 ? 3 DC A C4 1
ATOM 58 N N4 . DC A 1 3 ? 2.897 18.722 4.481 1.00 43.05 ? 3 DC A N4 1
ATOM 59 C C5 . DC A 1 3 ? 0.899 18.090 3.317 1.00 37.92 ? 3 DC A C5 1
ATOM 60 C C6 . DC A 1 3 ? 0.024 18.429 2.362 1.00 39.69 ? 3 DC A C6 1
ATOM 61 P P . DG A 1 4 ? -0.044 18.679 -3.698 1.00 59.39 ? 4 DG A P 1
ATOM 62 O OP1 . DG A 1 4 ? -0.550 18.491 -5.081 1.00 64.68 ? 4 DG A OP1 1
ATOM 63 O OP2 . DG A 1 4 ? 0.969 17.739 -3.142 1.00 54.75 ? 4 DG A OP2 1
ATOM 64 O "O5'" . DG A 1 4 ? 0.582 20.143 -3.608 1.00 54.25 ? 4 DG A "O5'" 1
ATOM 65 C "C5'" . DG A 1 4 ? 1.942 20.371 -4.016 1.00 45.40 ? 4 DG A "C5'" 1
ATOM 66 C "C4'" . DG A 1 4 ? 2.428 21.718 -3.533 1.00 37.26 ? 4 DG A "C4'" 1
ATOM 67 O "O4'" . DG A 1 4 ? 2.317 21.812 -2.097 1.00 31.01 ? 4 DG A "O4'" 1
ATOM 68 C "C3'" . DG A 1 4 ? 3.900 21.947 -3.834 1.00 41.01 ? 4 DG A "C3'" 1
ATOM 69 O "O3'" . DG A 1 4 ? 4.063 22.544 -5.124 1.00 51.85 ? 4 DG A "O3'" 1
ATOM 70 C "C2'" . DG A 1 4 ? 4.290 22.931 -2.752 1.00 35.24 ? 4 DG A "C2'" 1
ATOM 71 C "C1'" . DG A 1 4 ? 3.480 22.437 -1.564 1.00 32.35 ? 4 DG A "C1'" 1
ATOM 72 N N9 . DG A 1 4 ? 4.178 21.465 -0.729 1.00 29.47 ? 4 DG A N9 1
ATOM 73 C C8 . DG A 1 4 ? 3.805 20.172 -0.467 1.00 28.22 ? 4 DG A C8 1
ATOM 74 N N7 . DG A 1 4 ? 4.599 19.573 0.380 1.00 28.68 ? 4 DG A N7 1
ATOM 75 C C5 . DG A 1 4 ? 5.567 20.524 0.679 1.00 24.29 ? 4 DG A C5 1
ATOM 76 C C6 . DG A 1 4 ? 6.658 20.479 1.591 1.00 28.37 ? 4 DG A C6 1
ATOM 77 O O6 . DG A 1 4 ? 7.009 19.553 2.338 1.00 33.60 ? 4 DG A O6 1
ATOM 78 N N1 . DG A 1 4 ? 7.367 21.675 1.595 1.00 28.01 ? 4 DG A N1 1
ATOM 79 C C2 . DG A 1 4 ? 7.060 22.774 0.835 1.00 25.97 ? 4 DG A C2 1
ATOM 80 N N2 . DG A 1 4 ? 7.867 23.831 0.961 1.00 28.86 ? 4 DG A N2 1
ATOM 81 N N3 . DG A 1 4 ? 6.040 22.835 0.007 1.00 27.58 ? 4 DG A N3 1
ATOM 82 C C4 . DG A 1 4 ? 5.339 21.684 -0.021 1.00 25.66 ? 4 DG A C4 1
HETATM 83 N N1 . 5CM A 1 5 ? 9.230 23.116 -2.186 1.00 40.11 ? 5 5CM A N1 1
HETATM 84 C C2 . 5CM A 1 5 ? 10.197 22.791 -1.252 1.00 40.54 ? 5 5CM A C2 1
HETATM 85 N N3 . 5CM A 1 5 ? 10.212 21.552 -0.710 1.00 36.15 ? 5 5CM A N3 1
HETATM 86 C C4 . 5CM A 1 5 ? 9.300 20.656 -1.076 1.00 31.91 ? 5 5CM A C4 1
HETATM 87 C C5 . 5CM A 1 5 ? 8.324 20.943 -2.064 1.00 28.80 ? 5 5CM A C5 1
HETATM 88 C C5A . 5CM A 1 5 ? 7.342 19.877 -2.433 1.00 29.91 ? 5 5CM A C5A 1
HETATM 89 C C6 . 5CM A 1 5 ? 8.330 22.173 -2.607 1.00 34.46 ? 5 5CM A C6 1
HETATM 90 O O2 . 5CM A 1 5 ? 11.032 23.666 -0.941 1.00 40.79 ? 5 5CM A O2 1
HETATM 91 N N4 . 5CM A 1 5 ? 9.317 19.461 -0.469 1.00 36.10 ? 5 5CM A N4 1
HETATM 92 C "C1'" . 5CM A 1 5 ? 9.194 24.500 -2.684 1.00 50.27 ? 5 5CM A "C1'" 1
HETATM 93 C "C2'" . 5CM A 1 5 ? 9.913 24.725 -4.002 1.00 58.72 ? 5 5CM A "C2'" 1
HETATM 94 C "C3'" . 5CM A 1 5 ? 8.816 24.497 -5.022 1.00 60.57 ? 5 5CM A "C3'" 1
HETATM 95 C "C4'" . 5CM A 1 5 ? 7.584 25.047 -4.309 1.00 56.75 ? 5 5CM A "C4'" 1
HETATM 96 O "O4'" . 5CM A 1 5 ? 7.834 24.864 -2.898 1.00 53.27 ? 5 5CM A "O4'" 1
HETATM 97 O "O3'" . 5CM A 1 5 ? 9.107 25.271 -6.194 1.00 61.75 ? 5 5CM A "O3'" 1
HETATM 98 C "C5'" . 5CM A 1 5 ? 6.287 24.357 -4.667 1.00 55.93 ? 5 5CM A "C5'" 1
HETATM 99 O "O5'" . 5CM A 1 5 ? 6.540 23.041 -5.196 1.00 52.47 ? 5 5CM A "O5'" 1
HETATM 100 P P . 5CM A 1 5 ? 5.393 22.237 -5.966 1.00 56.54 ? 5 5CM A P 1
HETATM 101 O OP1 . 5CM A 1 5 ? 5.182 22.845 -7.306 1.00 61.22 ? 5 5CM A OP1 1
HETATM 102 O OP2 . 5CM A 1 5 ? 5.680 20.779 -5.845 1.00 52.85 ? 5 5CM A OP2 1
ATOM 103 P P . DC A 1 6 ? 10.188 24.724 -7.250 1.00 60.74 ? 6 DC A P 1
ATOM 104 O OP1 . DC A 1 6 ? 10.394 25.788 -8.276 1.00 62.14 ? 6 DC A OP1 1
ATOM 105 O OP2 . DC A 1 6 ? 9.809 23.324 -7.669 1.00 51.75 ? 6 DC A OP2 1
ATOM 106 O "O5'" . DC A 1 6 ? 11.525 24.614 -6.401 1.00 56.61 ? 6 DC A "O5'" 1
ATOM 107 C "C5'" . DC A 1 6 ? 12.376 23.470 -6.543 1.00 54.47 ? 6 DC A "C5'" 1
ATOM 108 C "C4'" . DC A 1 6 ? 13.437 23.476 -5.469 1.00 51.38 ? 6 DC A "C4'" 1
ATOM 109 O "O4'" . DC A 1 6 ? 12.839 23.025 -4.239 1.00 47.28 ? 6 DC A "O4'" 1
ATOM 110 C "C3'" . DC A 1 6 ? 14.578 22.506 -5.745 1.00 49.36 ? 6 DC A "C3'" 1
ATOM 111 O "O3'" . DC A 1 6 ? 15.619 23.218 -6.415 1.00 60.23 ? 6 DC A "O3'" 1
ATOM 112 C "C2'" . DC A 1 6 ? 15.020 22.107 -4.351 1.00 46.62 ? 6 DC A "C2'" 1
ATOM 113 C "C1'" . DC A 1 6 ? 13.786 22.291 -3.478 1.00 40.54 ? 6 DC A "C1'" 1
ATOM 114 N N1 . DC A 1 6 ? 13.155 21.039 -3.058 1.00 36.07 ? 6 DC A N1 1
ATOM 115 C C2 . DC A 1 6 ? 13.700 20.371 -1.974 1.00 39.75 ? 6 DC A C2 1
ATOM 116 O O2 . DC A 1 6 ? 14.697 20.885 -1.411 1.00 38.82 ? 6 DC A O2 1
ATOM 117 N N3 . DC A 1 6 ? 13.141 19.199 -1.566 1.00 36.35 ? 6 DC A N3 1
ATOM 118 C C4 . DC A 1 6 ? 12.078 18.710 -2.211 1.00 32.00 ? 6 DC A C4 1
ATOM 119 N N4 . DC A 1 6 ? 11.560 17.562 -1.779 1.00 34.13 ? 6 DC A N4 1
ATOM 120 C C5 . DC A 1 6 ? 11.499 19.381 -3.324 1.00 28.08 ? 6 DC A C5 1
ATOM 121 C C6 . DC A 1 6 ? 12.064 20.537 -3.710 1.00 29.38 ? 6 DC A C6 1
ATOM 122 O "O5'" . DG B 1 1 ? 16.161 13.615 5.432 1.00 63.64 ? 7 DG B "O5'" 1
ATOM 123 C "C5'" . DG B 1 1 ? 17.521 13.647 5.876 1.00 55.53 ? 7 DG B "C5'" 1
ATOM 124 C "C4'" . DG B 1 1 ? 18.201 14.952 5.530 1.00 56.54 ? 7 DG B "C4'" 1
ATOM 125 O "O4'" . DG B 1 1 ? 18.526 14.968 4.122 1.00 54.17 ? 7 DG B "O4'" 1
ATOM 126 C "C3'" . DG B 1 1 ? 17.318 16.175 5.757 1.00 60.90 ? 7 DG B "C3'" 1
ATOM 127 O "O3'" . DG B 1 1 ? 17.547 16.735 7.054 1.00 70.94 ? 7 DG B "O3'" 1
ATOM 128 C "C2'" . DG B 1 1 ? 17.796 17.120 4.673 1.00 54.31 ? 7 DG B "C2'" 1
ATOM 129 C "C1'" . DG B 1 1 ? 17.992 16.143 3.528 1.00 47.43 ? 7 DG B "C1'" 1
ATOM 130 N N9 . DG B 1 1 ? 16.735 15.782 2.877 1.00 37.40 ? 7 DG B N9 1
ATOM 131 C C8 . DG B 1 1 ? 15.990 14.645 3.070 1.00 33.43 ? 7 DG B C8 1
ATOM 132 N N7 . DG B 1 1 ? 14.893 14.622 2.358 1.00 36.70 ? 7 DG B N7 1
ATOM 133 C C5 . DG B 1 1 ? 14.919 15.816 1.648 1.00 33.41 ? 7 DG B C5 1
ATOM 134 C C6 . DG B 1 1 ? 13.980 16.371 0.726 1.00 34.63 ? 7 DG B C6 1
ATOM 135 O O6 . DG B 1 1 ? 12.884 15.902 0.353 1.00 36.22 ? 7 DG B O6 1
ATOM 136 N N1 . DG B 1 1 ? 14.417 17.603 0.235 1.00 28.39 ? 7 DG B N1 1
ATOM 137 C C2 . DG B 1 1 ? 15.599 18.228 0.604 1.00 33.60 ? 7 DG B C2 1
ATOM 138 N N2 . DG B 1 1 ? 15.894 19.408 0.034 1.00 35.94 ? 7 DG B N2 1
ATOM 139 N N3 . DG B 1 1 ? 16.452 17.733 1.477 1.00 38.91 ? 7 DG B N3 1
ATOM 140 C C4 . DG B 1 1 ? 16.057 16.535 1.950 1.00 35.57 ? 7 DG B C4 1
ATOM 141 P P . DG B 1 2 ? 16.354 17.517 7.790 1.00 69.54 ? 8 DG B P 1
ATOM 142 O OP1 . DG B 1 2 ? 16.775 17.770 9.192 1.00 76.97 ? 8 DG B OP1 1
ATOM 143 O OP2 . DG B 1 2 ? 15.066 16.808 7.517 1.00 63.09 ? 8 DG B OP2 1
ATOM 144 O "O5'" . DG B 1 2 ? 16.353 18.916 7.048 1.00 62.58 ? 8 DG B "O5'" 1
ATOM 145 C "C5'" . DG B 1 2 ? 17.567 19.662 6.927 1.00 55.84 ? 8 DG B "C5'" 1
ATOM 146 C "C4'" . DG B 1 2 ? 17.364 20.826 5.985 1.00 62.33 ? 8 DG B "C4'" 1
ATOM 147 O "O4'" . DG B 1 2 ? 17.117 20.332 4.652 1.00 56.67 ? 8 DG B "O4'" 1
ATOM 148 C "C3'" . DG B 1 2 ? 16.160 21.699 6.309 1.00 63.96 ? 8 DG B "C3'" 1
ATOM 149 O "O3'" . DG B 1 2 ? 16.496 22.709 7.271 1.00 68.18 ? 8 DG B "O3'" 1
ATOM 150 C "C2'" . DG B 1 2 ? 15.880 22.330 4.962 1.00 57.09 ? 8 DG B "C2'" 1
ATOM 151 C "C1'" . DG B 1 2 ? 16.190 21.194 3.996 1.00 48.22 ? 8 DG B "C1'" 1
ATOM 152 N N9 . DG B 1 2 ? 15.012 20.415 3.642 1.00 36.82 ? 8 DG B N9 1
ATOM 153 C C8 . DG B 1 2 ? 14.597 19.210 4.158 1.00 34.28 ? 8 DG B C8 1
ATOM 154 N N7 . DG B 1 2 ? 13.493 18.776 3.602 1.00 34.71 ? 8 DG B N7 1
ATOM 155 C C5 . DG B 1 2 ? 13.170 19.763 2.677 1.00 30.67 ? 8 DG B C5 1
ATOM 156 C C6 . DG B 1 2 ? 12.095 19.862 1.771 1.00 27.39 ? 8 DG B C6 1
ATOM 157 O O6 . DG B 1 2 ? 11.159 19.074 1.599 1.00 33.51 ? 8 DG B O6 1
ATOM 158 N N1 . DG B 1 2 ? 12.171 21.032 1.013 1.00 30.80 ? 8 DG B N1 1
ATOM 159 C C2 . DG B 1 2 ? 13.165 21.986 1.120 1.00 34.39 ? 8 DG B C2 1
ATOM 160 N N2 . DG B 1 2 ? 13.104 23.060 0.314 1.00 38.48 ? 8 DG B N2 1
ATOM 161 N N3 . DG B 1 2 ? 14.161 21.899 1.964 1.00 35.13 ? 8 DG B N3 1
ATOM 162 C C4 . DG B 1 2 ? 14.101 20.775 2.702 1.00 33.78 ? 8 DG B C4 1
ATOM 163 P P . DC B 1 3 ? 15.443 23.073 8.429 1.00 63.26 ? 9 DC B P 1
ATOM 164 O OP1 . DC B 1 3 ? 16.201 23.631 9.584 1.00 66.99 ? 9 DC B OP1 1
ATOM 165 O OP2 . DC B 1 3 ? 14.552 21.899 8.627 1.00 52.48 ? 9 DC B OP2 1
ATOM 166 O "O5'" . DC B 1 3 ? 14.590 24.248 7.787 1.00 56.19 ? 9 DC B "O5'" 1
ATOM 167 C "C5'" . DC B 1 3 ? 13.337 23.971 7.167 1.00 46.95 ? 9 DC B "C5'" 1
ATOM 168 C "C4'" . DC B 1 3 ? 13.030 25.029 6.135 1.00 43.45 ? 9 DC B "C4'" 1
ATOM 169 O "O4'" . DC B 1 3 ? 13.244 24.450 4.828 1.00 42.63 ? 9 DC B "O4'" 1
ATOM 170 C "C3'" . DC B 1 3 ? 11.566 25.458 6.160 1.00 46.70 ? 9 DC B "C3'" 1
ATOM 171 O "O3'" . DC B 1 3 ? 11.398 26.667 6.916 1.00 49.07 ? 9 DC B "O3'" 1
ATOM 172 C "C2'" . DC B 1 3 ? 11.276 25.704 4.693 1.00 44.35 ? 9 DC B "C2'" 1
ATOM 173 C "C1'" . DC B 1 3 ? 12.057 24.570 4.058 1.00 39.80 ? 9 DC B "C1'" 1
ATOM 174 N N1 . DC B 1 3 ? 11.335 23.292 4.132 1.00 32.73 ? 9 DC B N1 1
ATOM 175 C C2 . DC B 1 3 ? 10.307 23.057 3.229 1.00 28.95 ? 9 DC B C2 1
ATOM 176 O O2 . DC B 1 3 ? 10.058 23.915 2.366 1.00 36.89 ? 9 DC B O2 1
ATOM 177 N N3 . DC B 1 3 ? 9.605 21.914 3.307 1.00 29.38 ? 9 DC B N3 1
ATOM 178 C C4 . DC B 1 3 ? 9.903 21.012 4.234 1.00 26.16 ? 9 DC B C4 1
ATOM 179 N N4 . DC B 1 3 ? 9.156 19.902 4.273 1.00 28.76 ? 9 DC B N4 1
ATOM 180 C C5 . DC B 1 3 ? 10.969 21.208 5.159 1.00 28.28 ? 9 DC B C5 1
ATOM 181 C C6 . DC B 1 3 ? 11.656 22.355 5.072 1.00 28.10 ? 9 DC B C6 1
ATOM 182 P P . DG B 1 4 ? 10.130 26.816 7.896 1.00 51.61 ? 10 DG B P 1
ATOM 183 O OP1 . DG B 1 4 ? 10.406 27.998 8.744 1.00 52.84 ? 10 DG B OP1 1
ATOM 184 O OP2 . DG B 1 4 ? 9.830 25.500 8.525 1.00 40.93 ? 10 DG B OP2 1
ATOM 185 O "O5'" . DG B 1 4 ? 8.915 27.146 6.916 1.00 45.29 ? 10 DG B "O5'" 1
ATOM 186 C "C5'" . DG B 1 4 ? 9.115 27.995 5.777 1.00 38.81 ? 10 DG B "C5'" 1
ATOM 187 C "C4'" . DG B 1 4 ? 8.016 27.793 4.758 1.00 34.42 ? 10 DG B "C4'" 1
ATOM 188 O "O4'" . DG B 1 4 ? 8.143 26.537 4.065 1.00 28.92 ? 10 DG B "O4'" 1
ATOM 189 C "C3'" . DG B 1 4 ? 6.600 27.800 5.307 1.00 29.76 ? 10 DG B "C3'" 1
ATOM 190 O "O3'" . DG B 1 4 ? 6.145 29.149 5.452 1.00 32.60 ? 10 DG B "O3'" 1
ATOM 191 C "C2'" . DG B 1 4 ? 5.851 27.119 4.180 1.00 30.83 ? 10 DG B "C2'" 1
ATOM 192 C "C1'" . DG B 1 4 ? 6.850 26.080 3.682 1.00 27.30 ? 10 DG B "C1'" 1
ATOM 193 N N9 . DG B 1 4 ? 6.638 24.771 4.284 1.00 27.16 ? 10 DG B N9 1
ATOM 194 C C8 . DG B 1 4 ? 7.343 24.200 5.309 1.00 22.82 ? 10 DG B C8 1
ATOM 195 N N7 . DG B 1 4 ? 6.887 23.023 5.639 1.00 27.23 ? 10 DG B N7 1
ATOM 196 C C5 . DG B 1 4 ? 5.827 22.807 4.770 1.00 22.57 ? 10 DG B C5 1
ATOM 197 C C6 . DG B 1 4 ? 4.946 21.706 4.644 1.00 29.77 ? 10 DG B C6 1
ATOM 198 O O6 . DG B 1 4 ? 4.935 20.647 5.285 1.00 37.63 ? 10 DG B O6 1
ATOM 199 N N1 . DG B 1 4 ? 4.004 21.917 3.641 1.00 30.07 ? 10 DG B N1 1
ATOM 200 C C2 . DG B 1 4 ? 3.936 23.041 2.852 1.00 26.54 ? 10 DG B C2 1
ATOM 201 N N2 . DG B 1 4 ? 2.971 23.082 1.928 1.00 26.36 ? 10 DG B N2 1
ATOM 202 N N3 . DG B 1 4 ? 4.757 24.058 2.957 1.00 27.04 ? 10 DG B N3 1
ATOM 203 C C4 . DG B 1 4 ? 5.667 23.876 3.929 1.00 24.64 ? 10 DG B C4 1
HETATM 204 N N1 . 5CM B 1 5 ? 1.658 25.577 4.199 1.00 25.95 ? 11 5CM B N1 1
HETATM 205 C C2 . 5CM B 1 5 ? 0.905 24.413 4.278 1.00 21.60 ? 11 5CM B C2 1
HETATM 206 N N3 . 5CM B 1 5 ? 1.211 23.487 5.199 1.00 19.65 ? 11 5CM B N3 1
HETATM 207 C C4 . 5CM B 1 5 ? 2.226 23.691 6.032 1.00 20.86 ? 11 5CM B C4 1
HETATM 208 C C5 . 5CM B 1 5 ? 2.989 24.889 6.009 1.00 25.83 ? 11 5CM B C5 1
HETATM 209 C C5A . 5CM B 1 5 ? 4.051 25.104 7.038 1.00 18.59 ? 11 5CM B C5A 1
HETATM 210 C C6 . 5CM B 1 5 ? 2.692 25.790 5.064 1.00 28.74 ? 11 5CM B C6 1
HETATM 211 O O2 . 5CM B 1 5 ? -0.033 24.262 3.493 1.00 26.68 ? 11 5CM B O2 1
HETATM 212 N N4 . 5CM B 1 5 ? 2.526 22.722 6.892 1.00 24.19 ? 11 5CM B N4 1
HETATM 213 C "C1'" . 5CM B 1 5 ? 1.311 26.574 3.177 1.00 25.46 ? 11 5CM B "C1'" 1
HETATM 214 C "C2'" . 5CM B 1 5 ? 0.140 27.457 3.592 1.00 22.15 ? 11 5CM B "C2'" 1
HETATM 215 C "C3'" . 5CM B 1 5 ? 0.852 28.594 4.296 1.00 24.07 ? 11 5CM B "C3'" 1
HETATM 216 C "C4'" . 5CM B 1 5 ? 2.056 28.777 3.388 1.00 20.72 ? 11 5CM B "C4'" 1
HETATM 217 O "O4'" . 5CM B 1 5 ? 2.432 27.440 3.004 1.00 21.21 ? 11 5CM B "O4'" 1
HETATM 218 O "O3'" . 5CM B 1 5 ? 0.028 29.763 4.319 1.00 29.20 ? 11 5CM B "O3'" 1
HETATM 219 C "C5'" . 5CM B 1 5 ? 3.233 29.492 4.009 1.00 24.40 ? 11 5CM B "C5'" 1
HETATM 220 O "O5'" . 5CM B 1 5 ? 3.672 28.793 5.177 1.00 32.40 ? 11 5CM B "O5'" 1
HETATM 221 P P . 5CM B 1 5 ? 4.737 29.441 6.161 1.00 24.72 ? 11 5CM B P 1
HETATM 222 O OP1 . 5CM B 1 5 ? 4.581 30.900 6.156 1.00 36.55 ? 11 5CM B OP1 1
HETATM 223 O OP2 . 5CM B 1 5 ? 4.645 28.702 7.437 1.00 31.48 ? 11 5CM B OP2 1
ATOM 224 P P . DC B 1 6 ? -0.860 30.066 5.616 1.00 25.69 ? 12 DC B P 1
ATOM 225 O OP1 . DC B 1 6 ? -1.492 31.377 5.407 1.00 34.64 ? 12 DC B OP1 1
ATOM 226 O OP2 . DC B 1 6 ? -0.029 29.848 6.807 1.00 22.53 ? 12 DC B OP2 1
ATOM 227 O "O5'" . DC B 1 6 ? -1.995 28.964 5.527 1.00 22.09 ? 12 DC B "O5'" 1
ATOM 228 C "C5'" . DC B 1 6 ? -2.808 28.858 4.350 1.00 25.45 ? 12 DC B "C5'" 1
ATOM 229 C "C4'" . DC B 1 6 ? -3.874 27.801 4.531 1.00 28.14 ? 12 DC B "C4'" 1
ATOM 230 O "O4'" . DC B 1 6 ? -3.267 26.497 4.432 1.00 32.18 ? 12 DC B "O4'" 1
ATOM 231 C "C3'" . DC B 1 6 ? -4.596 27.815 5.873 1.00 26.56 ? 12 DC B "C3'" 1
ATOM 232 O "O3'" . DC B 1 6 ? -5.794 28.600 5.839 1.00 27.21 ? 12 DC B "O3'" 1
ATOM 233 C "C2'" . DC B 1 6 ? -5.003 26.365 6.036 1.00 27.52 ? 12 DC B "C2'" 1
ATOM 234 C "C1'" . DC B 1 6 ? -3.917 25.585 5.311 1.00 25.82 ? 12 DC B "C1'" 1
ATOM 235 N N1 . DC B 1 6 ? -2.905 25.020 6.209 1.00 31.08 ? 12 DC B N1 1
ATOM 236 C C2 . DC B 1 6 ? -3.093 23.745 6.688 1.00 31.53 ? 12 DC B C2 1
ATOM 237 O O2 . DC B 1 6 ? -4.112 23.143 6.349 1.00 38.97 ? 12 DC B O2 1
ATOM 238 N N3 . DC B 1 6 ? -2.172 23.200 7.510 1.00 27.03 ? 12 DC B N3 1
ATOM 239 C C4 . DC B 1 6 ? -1.094 23.900 7.851 1.00 28.61 ? 12 DC B C4 1
ATOM 240 N N4 . DC B 1 6 ? -0.212 23.333 8.661 1.00 33.82 ? 12 DC B N4 1
ATOM 241 C C5 . DC B 1 6 ? -0.874 25.218 7.378 1.00 26.36 ? 12 DC B C5 1
ATOM 242 C C6 . DC B 1 6 ? -1.799 25.738 6.566 1.00 32.08 ? 12 DC B C6 1
HETATM 243 O O . HOH C 2 . ? 2.224 18.938 8.736 1.00 60.07 ? 17 HOH A O 1
HETATM 244 O O . HOH C 2 . ? 8.364 16.863 0.389 1.00 60.73 ? 19 HOH A O 1
HETATM 245 O O . HOH C 2 . ? 0.074 16.670 7.183 1.00 90.24 ? 21 HOH A O 1
HETATM 246 O O . HOH C 2 . ? 10.242 16.171 -3.153 1.00 86.35 ? 22 HOH A O 1
HETATM 247 O O . HOH C 2 . ? 0.240 20.629 12.122 1.00 94.07 ? 30 HOH A O 1
HETATM 248 O O . HOH C 2 . ? 8.267 28.229 -7.870 1.00 47.59 ? 32 HOH A O 1
HETATM 249 O O . HOH C 2 . ? 5.211 17.240 2.460 1.00 76.09 ? 37 HOH A O 1
HETATM 250 O O . HOH C 2 . ? 11.940 20.065 -8.363 1.00 99.51 ? 40 HOH A O 1
HETATM 251 O O . HOH D 2 . ? 1.545 25.349 9.810 1.00 31.29 ? 13 HOH B O 1
HETATM 252 O O . HOH D 2 . ? 1.338 31.779 8.680 1.00 46.75 ? 14 HOH B O 1
HETATM 253 O O . HOH D 2 . ? 1.850 27.980 8.362 1.00 41.72 ? 15 HOH B O 1
HETATM 254 O O . HOH D 2 . ? 4.416 22.044 9.075 1.00 56.75 ? 16 HOH B O 1
HETATM 255 O O . HOH D 2 . ? 7.605 21.294 7.521 1.00 62.79 ? 18 HOH B O 1
HETATM 256 O O . HOH D 2 . ? -2.339 25.617 1.808 1.00 52.14 ? 20 HOH B O 1
HETATM 257 O O . HOH D 2 . ? 13.920 28.660 8.922 1.00 96.42 ? 23 HOH B O 1
HETATM 258 O O . HOH D 2 . ? 5.982 24.860 10.253 1.00 88.73 ? 24 HOH B O 1
HETATM 259 O O . HOH D 2 . ? -8.174 31.604 6.313 1.00 44.10 ? 25 HOH B O 1
HETATM 260 O O . HOH D 2 . ? 12.763 16.894 4.938 1.00 63.73 ? 26 HOH B O 1
HETATM 261 O O . HOH D 2 . ? 13.173 20.168 8.442 1.00 72.05 ? 27 HOH B O 1
HETATM 262 O O . HOH D 2 . ? 2.104 33.274 5.527 1.00 52.25 ? 28 HOH B O 1
HETATM 263 O O . HOH D 2 . ? -5.301 30.578 2.294 1.00 63.76 ? 29 HOH B O 1
HETATM 264 O O . HOH D 2 . ? -5.964 30.790 5.797 1.00 68.91 ? 31 HOH B O 1
HETATM 265 O O . HOH D 2 . ? 10.723 16.811 1.822 1.00 93.48 ? 33 HOH B O 1
HETATM 266 O O . HOH D 2 . ? 3.702 31.543 9.719 1.00 78.32 ? 34 HOH B O 1
HETATM 267 O O . HOH D 2 . ? 5.467 27.173 9.624 1.00 66.18 ? 35 HOH B O 1
HETATM 268 O O . HOH D 2 . ? 12.968 13.381 2.212 1.00 71.76 ? 36 HOH B O 1
HETATM 269 O O . HOH D 2 . ? 5.756 18.186 6.813 1.00 88.59 ? 38 HOH B O 1
HETATM 270 O O . HOH D 2 . ? -5.068 27.584 0.970 1.00 72.47 ? 39 HOH B O 1
HETATM 271 O O . HOH D 2 . ? -3.069 33.242 6.341 1.00 91.49 ? 41 HOH B O 1
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