data_1E9W
#
_entry.id 1E9W
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.391
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1E9W pdb_00001e9w 10.2210/pdb1e9w/pdb
PDBE EBI-5497 ? ?
WWPDB D_1290005497 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2001-03-23
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2012-11-30
4 'Structure model' 2 0 2019-04-24
5 'Structure model' 2 1 2019-05-22
6 'Structure model' 2 2 2024-05-01
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Atomic model'
2 2 'Structure model' 'Database references'
3 2 'Structure model' 'Derived calculations'
4 2 'Structure model' 'Structure summary'
5 2 'Structure model' 'Version format compliance'
6 3 'Structure model' Other
7 4 'Structure model' 'Data collection'
8 4 'Structure model' 'Derived calculations'
9 4 'Structure model' Other
10 4 'Structure model' 'Polymer sequence'
11 5 'Structure model' 'Data collection'
12 5 'Structure model' 'Refinement description'
13 6 'Structure model' 'Data collection'
14 6 'Structure model' 'Database references'
15 6 'Structure model' 'Derived calculations'
16 6 'Structure model' Other
17 6 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' database_PDB_rev
2 4 'Structure model' database_PDB_rev_record
3 4 'Structure model' entity_poly
4 4 'Structure model' pdbx_database_proc
5 4 'Structure model' pdbx_database_status
6 4 'Structure model' pdbx_seq_map_depositor_info
7 4 'Structure model' struct_conn
8 5 'Structure model' refine
9 6 'Structure model' chem_comp_atom
10 6 'Structure model' chem_comp_bond
11 6 'Structure model' database_2
12 6 'Structure model' pdbx_database_status
13 6 'Structure model' pdbx_initial_refinement_model
14 6 'Structure model' struct_conn
15 6 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'
2 4 'Structure model' '_pdbx_database_status.recvd_author_approval'
3 4 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code'
4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
5 5 'Structure model' '_refine.pdbx_ls_cross_valid_method'
6 6 'Structure model' '_database_2.pdbx_DOI'
7 6 'Structure model' '_database_2.pdbx_database_accession'
8 6 'Structure model' '_pdbx_database_status.status_code_sf'
9 6 'Structure model' '_struct_conn.pdbx_dist_value'
10 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
11 6 'Structure model' '_struct_conn.ptnr1_label_atom_id'
12 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
13 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
14 6 'Structure model' '_struct_conn.ptnr2_label_atom_id'
15 6 'Structure model' '_struct_conn.ptnr2_label_comp_id'
16 6 'Structure model' '_struct_conn.ptnr2_label_seq_id'
17 6 'Structure model' '_struct_site.pdbx_auth_asym_id'
18 6 'Structure model' '_struct_site.pdbx_auth_comp_id'
19 6 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1E9W
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.SG_entry .
_pdbx_database_status.recvd_initial_deposition_date 2000-10-27
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.content_type
_pdbx_database_related.details
PDB 1D8T unspecified 'CRYSTAL STRUCTURE OF THE ELONGATION FACTOR EF-TU-MGGDP COMPLEXED WITH THE THIOPEPTIDE GE2270A.'
PDB 1OLN unspecified 'SOLUTION STRUCTURE OF THIOPEPTIDE THIOSTREPTON BINDING TO L11 SUBSTRATE FROM 50S RIBOSOMAL RNA'
PDB 2C77 unspecified 'CRYSTAL STRUCTURE OF THE ELONGATION FACTOR EF-TU-GNP COMPLEXED WITH THIOPEPTIDE GE2270A.'
PDB 2JQ7 unspecified 'SOLUTION STRUCTURE OF THE COMPLEX OF THE THIOPEPTIDE THIOSTREPTON AND RIBOSOMAL L11-RNA'
PDB 2ZJP unspecified 'CRYSTAL STRUCTURE OF NOSIHEPTIDE COMPLEXED WITH THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS'
PDB 3CF5 unspecified 'CRYSTAL STRUCTURE OF RIBOSOMAL L11-RNA COMPLEXED WITH THE THIOPEPTIDE THIOSTREPTON'
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bond, C.S.' 1
'Shaw, M.P.' 2
'Alphey, M.S.' 3
'Hunter, W.N.' 4
#
_citation.id primary
_citation.title
'Structure of the Macrocycle Thiostrepton Solved Using the Anomalous Dispersive Contribution from Sulfur'
_citation.journal_abbrev 'Acta Crystallogr.,Sect.D'
_citation.journal_volume 57
_citation.page_first 755
_citation.page_last ?
_citation.year 2001
_citation.journal_id_ASTM ABCRE6
_citation.country DK
_citation.journal_id_ISSN 0907-4449
_citation.journal_id_CSD 0766
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 11320328
_citation.pdbx_database_id_DOI 10.1107/S0907444901003134
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Bond, C.S.' 1 ?
primary 'Shaw, M.P.' 2 ?
primary 'Alphey, M.S.' 3 ?
primary 'Hunter, W.N.' 4 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat THIOSTREPTON 1805.985 1 ? ? ? ?
2 water nat water 18.015 4 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'ALANINAMIDE, BRYAMYCIN, THIACTIN'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(QUA)IA(DHA)AS(BB9)T(DBU)(DCY)(TS9)(BB9)T(BB9)(MH6)(BB9)(DHA)(DHA)(NH2)'
_entity_poly.pdbx_seq_one_letter_code_can XIASASCTTCICTCSCSSX
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 QUA n
1 2 ILE n
1 3 ALA n
1 4 DHA n
1 5 ALA n
1 6 SER n
1 7 BB9 n
1 8 THR n
1 9 DBU n
1 10 DCY n
1 11 TS9 n
1 12 BB9 n
1 13 THR n
1 14 BB9 n
1 15 MH6 n
1 16 BB9 n
1 17 DHA n
1 18 DHA n
1 19 NH2 n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'STREPTOMYCES AZUREUS'
_entity_src_nat.pdbx_ncbi_taxonomy_id 146537
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details CALBIOCHEM
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
BB9 'peptide linking' n '(2Z)-2-amino-3-sulfanylprop-2-enoic acid' ? 'C3 H5 N O2 S' 119.142
DBU 'peptide linking' n '(2Z)-2-AMINOBUT-2-ENOIC ACID' Z-DEHYDROBUTYRINE 'C4 H7 N O2' 101.104
DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158
DHA 'peptide linking' n '2-AMINO-ACRYLIC ACID' 2,3-DIDEHYDROALANINE 'C3 H5 N O2' 87.077
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
MH6 'peptide linking' n '3-hydroxy-2-iminopropanoic acid' ? 'C3 H5 N O3' 103.077
NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023
QUA non-polymer . '8-HYDROXY-4-(1-HYDROXYETHYL)QUINOLINE-2-CARBOXYLIC ACID' ? 'C12 H13 N O4' 235.236
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TS9 'L-peptide linking' n '(2S,3S,4R)-2-amino-3,4-dihydroxy-3-methylpentanoic acid' ? 'C6 H13 N O4' 163.172
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 QUA 1 0 0 QUA QUA A . n
A 1 2 ILE 2 1 1 ILE ILE A . n
A 1 3 ALA 3 2 2 ALA ALA A . n
A 1 4 DHA 4 3 3 DHA DHA A . n
A 1 5 ALA 5 4 4 ALA ALA A . n
A 1 6 SER 6 5 5 SER SER A . n
A 1 7 BB9 7 6 6 BB9 BB9 A . n
A 1 8 THR 8 7 7 THR THR A . n
A 1 9 DBU 9 8 8 DBU DBU A . n
A 1 10 DCY 10 9 9 DCY DCY A . n
A 1 11 TS9 11 10 10 TS9 TS9 A . n
A 1 12 BB9 12 11 11 BB9 BB9 A . n
A 1 13 THR 13 12 12 THR THR A . n
A 1 14 BB9 14 13 13 BB9 BB9 A . n
A 1 15 MH6 15 14 14 MH6 MH6 A . n
A 1 16 BB9 16 15 15 BB9 BB9 A . n
A 1 17 DHA 17 16 16 DHA DHA A . n
A 1 18 DHA 18 17 17 DHA DHA A . n
A 1 19 NH2 19 18 18 NH2 NH2 A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 2001 2001 HOH HOH A .
B 2 HOH 2 2002 2002 HOH HOH A .
B 2 HOH 3 2003 2003 HOH HOH A .
B 2 HOH 4 2004 2004 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
SHELXL-97 refinement . ? 1
DENZO 'data reduction' . ? 2
SCALEPACK 'data scaling' . ? 3
SHELX phasing . ? 4
#
_cell.entry_id 1E9W
_cell.length_a 26.577
_cell.length_b 26.577
_cell.length_c 27.436
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1E9W
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
#
_exptl.entry_id 1E9W
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 1.46
_exptl_crystal.density_percent_sol 14.8
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.00
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details
'1ML 15.38MG/ML THIOSTREPTON IN CHLOROFORM_ISOAMYL ALCOHOL + 100 MICROL GLYCEROL + 200 MICROL ETHANOL. BATCH METHOD, pH 7.00'
#
_diffrn.id 1
_diffrn.ambient_temp 100.0
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type MARRESEARCH
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.73
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE BM14'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline BM14
_diffrn_source.pdbx_wavelength 0.73
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.entry_id 1E9W
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 50.000
_reflns.d_resolution_high 1.020
_reflns.number_obs 5232
_reflns.number_all ?
_reflns.percent_possible_obs 96.7
_reflns.pdbx_Rmerge_I_obs 0.03300
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 33.8000
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 4.300
#
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_ordinal 1
_reflns_shell.d_res_high 1.02
_reflns_shell.d_res_low 1.04
_reflns_shell.percent_possible_all 74.6
_reflns_shell.Rmerge_I_obs 0.15200
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 5.400
_reflns_shell.pdbx_redundancy ?
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 1E9W
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs ?
_refine.ls_number_reflns_all 8391
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 50.00
_refine.ls_d_res_high 1.02
_refine.ls_percent_reflns_obs 96.7
_refine.ls_R_factor_obs 0.1124
_refine.ls_R_factor_all 0.1122
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free 0.1423
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 9.8
_refine.ls_number_reflns_R_free 825
_refine.ls_number_parameters 1057
_refine.ls_number_restraints 1023
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-2'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.details ?
_refine.pdbx_starting_model 'SEE REFERENCE'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER'
_refine.pdbx_stereochem_target_val_spec_case 'RESIDUE 16 RESTRAINED USING GEOMETRY DERIVED FROM CSD (SEE REFERENCE)'
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_analyze.entry_id 1E9W
_refine_analyze.Luzzati_coordinate_error_obs ?
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues 0
_refine_analyze.occupancy_sum_hydrogen 0.00
_refine_analyze.occupancy_sum_non_hydrogen 115.33
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 114
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 4
_refine_hist.number_atoms_total 118
_refine_hist.d_res_high 1.02
_refine_hist.d_res_low 50.00
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
s_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ?
s_angle_d 0.047 ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ?
s_from_restr_planes 0.0001 ? ? ? 'X-RAY DIFFRACTION' ?
s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ?
s_non_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ?
s_anti_bump_dis_restr 0.051 ? ? ? 'X-RAY DIFFRACTION' ?
s_rigid_bond_adp_cmpnt 0.007 ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_adp_cmpnt 0.037 ? ? ? 'X-RAY DIFFRACTION' ?
s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ?
#
_pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine.entry_id 1E9W
_pdbx_refine.R_factor_all_no_cutoff 0.1122
_pdbx_refine.R_factor_obs_no_cutoff 0.1124
_pdbx_refine.free_R_factor_no_cutoff 0.1423
_pdbx_refine.free_R_error_no_cutoff ?
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 9.8
_pdbx_refine.free_R_val_test_set_ct_no_cutoff 825
_pdbx_refine.R_factor_all_4sig_cutoff 0.1069
_pdbx_refine.R_factor_obs_4sig_cutoff 0.1071
_pdbx_refine.free_R_factor_4sig_cutoff 0.1362
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 9.8
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 755
_pdbx_refine.number_reflns_obs_4sig_cutoff 7729
#
_database_PDB_matrix.entry_id 1E9W
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1E9W
_struct.title
'Structure of the macrocycle thiostrepton solved using the anomalous dispersive contribution from sulfur'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1E9W
_struct_keywords.pdbx_keywords ANTIBIOTIC
_struct_keywords.text
'ANTIBIOTIC, THIOPEPTIDE, ANTIBACTERIAL, THIAZOLE, THIAZOLINE, OXAZOLE, RIBOSOME, TRANSLATION INHIBITION'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code THCL_STRAJ
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_db_accession P0C8P8
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1E9W
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 2
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 18
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P0C8P8
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 17
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 17
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A QUA 1 C7 ? ? ? 1_555 A ILE 2 N ? ? A QUA 0 A ILE 1 1_555 ? ? ? ? ? ? ? 1.499 ? ?
covale2 covale one ? A QUA 1 C11 ? ? ? 1_555 A THR 13 OG1 ? ? A QUA 0 A THR 12 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale3 covale both ? A ALA 3 C ? ? ? 1_555 A DHA 4 N ? ? A ALA 2 A DHA 3 1_555 ? ? ? ? ? ? ? 1.383 ? ?
covale4 covale both ? A DHA 4 C ? ? ? 1_555 A ALA 5 N ? ? A DHA 3 A ALA 4 1_555 ? ? ? ? ? ? ? 1.348 ? ?
covale5 covale one ? A SER 6 C ? ? ? 1_555 A BB9 7 SG ? ? A SER 5 A BB9 6 1_555 ? ? ? ? ? ? ? 1.752 ? ?
covale6 covale both ? A SER 6 C ? ? ? 1_555 A BB9 7 N ? ? A SER 5 A BB9 6 1_555 ? ? ? ? ? ? ? 1.305 ? ?
covale7 covale one ? A SER 6 CA ? ? ? 1_555 A BB9 14 C ? ? A SER 5 A BB9 13 1_555 ? ? ? ? ? ? ? 1.575 ? ?
covale8 covale one ? A SER 6 CB ? ? ? 1_555 A MH6 15 CB ? ? A SER 5 A MH6 14 1_555 ? ? ? ? ? ? ? 1.523 ? ?
covale9 covale both ? A BB9 7 C ? ? ? 1_555 A THR 8 N ? ? A BB9 6 A THR 7 1_555 ? ? ? ? ? ? ? 1.322 ? ?
covale10 covale both ? A THR 8 C ? ? ? 1_555 A DBU 9 N ? ? A THR 7 A DBU 8 1_555 ? ? ? ? ? ? ? 1.353 ? ?
covale11 covale one ? A DBU 9 C ? ? ? 1_555 A DCY 10 SG ? ? A DBU 8 A DCY 9 1_555 ? ? ? ? ? ? ? 1.750 ? ?
covale12 covale both ? A DBU 9 C ? ? ? 1_555 A DCY 10 N ? ? A DBU 8 A DCY 9 1_555 ? ? ? ? ? ? ? 1.293 ? ?
covale13 covale both ? A DCY 10 C ? ? ? 1_555 A TS9 11 N ? ? A DCY 9 A TS9 10 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale14 covale one ? A TS9 11 C ? ? ? 1_555 A BB9 12 SG ? ? A TS9 10 A BB9 11 1_555 ? ? ? ? ? ? ? 1.750 ? ?
covale15 covale both ? A TS9 11 C ? ? ? 1_555 A BB9 12 N ? ? A TS9 10 A BB9 11 1_555 ? ? ? ? ? ? ? 1.279 ? ?
covale16 covale both ? A BB9 12 C ? ? ? 1_555 A THR 13 N ? ? A BB9 11 A THR 12 1_555 ? ? ? ? ? ? ? 1.359 ? ?
covale17 covale one ? A THR 13 C ? ? ? 1_555 A BB9 14 SG ? ? A THR 12 A BB9 13 1_555 ? ? ? ? ? ? ? 1.709 ? ?
covale18 covale both ? A THR 13 C ? ? ? 1_555 A BB9 14 N ? ? A THR 12 A BB9 13 1_555 ? ? ? ? ? ? ? 1.292 ? ?
covale19 covale both ? A BB9 14 C ? ? ? 1_555 A MH6 15 N ? ? A BB9 13 A MH6 14 1_555 ? ? ? ? ? ? ? 1.475 ? ?
covale20 covale one ? A MH6 15 C ? ? ? 1_555 A BB9 16 SG ? ? A MH6 14 A BB9 15 1_555 ? ? ? ? ? ? ? 1.650 ? ?
covale21 covale both ? A MH6 15 C ? ? ? 1_555 A BB9 16 N ? ? A MH6 14 A BB9 15 1_555 ? ? ? ? ? ? ? 1.300 ? ?
covale22 covale both ? A BB9 16 C ? ? ? 1_555 A DHA 17 N ? ? A BB9 15 A DHA 16 1_555 ? ? ? ? ? ? ? 1.380 ? ?
covale23 covale both ? A DHA 17 C ? ? ? 1_555 A DHA 18 N ? ? A DHA 16 A DHA 17 1_555 ? ? ? ? ? ? ? 1.229 ? ?
covale24 covale both ? A DHA 18 C ? ? ? 1_555 A NH2 19 N ? ? A DHA 17 A NH2 18 1_555 ? ? ? ? ? ? ? 1.350 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A QUA 0 ? 15 'BINDING SITE FOR RESIDUE QUA A 0'
AC2 Software A NH2 18 ? 3 'BINDING SITE FOR RESIDUE NH2 A 18'
AC3 Software ? ? ? ? 11 'BINDING SITE FOR CHAIN A OF THIOSTREPTON'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 15 ILE A 2 ? ILE A 1 . ? 1_555 ?
2 AC1 15 ALA A 3 ? ALA A 2 . ? 1_555 ?
3 AC1 15 DHA A 4 ? DHA A 3 . ? 1_555 ?
4 AC1 15 DHA A 4 ? DHA A 3 . ? 3_554 ?
5 AC1 15 ALA A 5 ? ALA A 4 . ? 3_554 ?
6 AC1 15 ALA A 5 ? ALA A 4 . ? 1_555 ?
7 AC1 15 SER A 6 ? SER A 5 . ? 1_555 ?
8 AC1 15 BB9 A 7 ? BB9 A 6 . ? 1_555 ?
9 AC1 15 THR A 8 ? THR A 7 . ? 1_555 ?
10 AC1 15 TS9 A 11 ? TS9 A 10 . ? 1_555 ?
11 AC1 15 BB9 A 12 ? BB9 A 11 . ? 6_465 ?
12 AC1 15 THR A 13 ? THR A 12 . ? 1_555 ?
13 AC1 15 BB9 A 14 ? BB9 A 13 . ? 1_555 ?
14 AC1 15 NH2 A 19 ? NH2 A 18 . ? 6_455 ?
15 AC1 15 HOH B . ? HOH A 2004 . ? 1_555 ?
16 AC2 3 QUA A 1 ? QUA A 0 . ? 6_555 ?
17 AC2 3 BB9 A 7 ? BB9 A 6 . ? 7_555 ?
18 AC2 3 DHA A 18 ? DHA A 17 . ? 1_555 ?
19 AC3 11 QUA A 1 ? QUA A 0 . ? 1_555 ?
20 AC3 11 QUA A 1 ? QUA A 0 . ? 4_455 ?
21 AC3 11 QUA A 1 ? QUA A 0 . ? 6_565 ?
22 AC3 11 NH2 A 19 ? NH2 A 18 . ? 1_555 ?
23 AC3 11 NH2 A 19 ? NH2 A 18 . ? 7_555 ?
24 AC3 11 HOH B . ? HOH A 2001 . ? 8_665 ?
25 AC3 11 HOH B . ? HOH A 2001 . ? 1_555 ?
26 AC3 11 HOH B . ? HOH A 2002 . ? 8_665 ?
27 AC3 11 HOH B . ? HOH A 2002 . ? 1_555 ?
28 AC3 11 HOH B . ? HOH A 2003 . ? 1_555 ?
29 AC3 11 HOH B . ? HOH A 2004 . ? 1_555 ?
#
_pdbx_validate_rmsd_bond.id 1
_pdbx_validate_rmsd_bond.PDB_model_num 1
_pdbx_validate_rmsd_bond.auth_atom_id_1 C
_pdbx_validate_rmsd_bond.auth_asym_id_1 A
_pdbx_validate_rmsd_bond.auth_comp_id_1 BB9
_pdbx_validate_rmsd_bond.auth_seq_id_1 13
_pdbx_validate_rmsd_bond.PDB_ins_code_1 ?
_pdbx_validate_rmsd_bond.label_alt_id_1 ?
_pdbx_validate_rmsd_bond.auth_atom_id_2 N
_pdbx_validate_rmsd_bond.auth_asym_id_2 A
_pdbx_validate_rmsd_bond.auth_comp_id_2 MH6
_pdbx_validate_rmsd_bond.auth_seq_id_2 14
_pdbx_validate_rmsd_bond.PDB_ins_code_2 ?
_pdbx_validate_rmsd_bond.label_alt_id_2 ?
_pdbx_validate_rmsd_bond.bond_value 1.475
_pdbx_validate_rmsd_bond.bond_target_value 1.336
_pdbx_validate_rmsd_bond.bond_deviation 0.139
_pdbx_validate_rmsd_bond.bond_standard_deviation 0.023
_pdbx_validate_rmsd_bond.linker_flag Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 SER A 5 ? ? 71.84 80.87
2 1 DCY A 9 ? ? -147.29 -14.74
3 1 TS9 A 10 ? ? -107.46 -65.52
#
_pdbx_molecule_features.prd_id PRD_000223
_pdbx_molecule_features.name THIOSTREPTON
_pdbx_molecule_features.type Thiopeptide
_pdbx_molecule_features.class Antibiotic
_pdbx_molecule_features.details
;Thiostrepton is a hetrocyclic thiopeptide belonging to the
thiocillin family, consisting of four thiazole, one thiozoline and one
piperideine rings. A modified quinoline linked to main-chain residue 1
and side-chain of residue 12. Post translational maturation of
thiazole and oxazole containing antibiotics involves the enzymic
condensation of a Cys or Ser with the alpha-carbonyl of the preceding
amino acid to form a thioether or ether bond, then dehydration to form
a double bond with the alpha-amino nitrogen. Thiazoline or oxazoline
ring are dehydrogenated to form thiazole or oxazole rings. the
pyridinyl involves the cross-linking of a Ser and a Cys-Ser pair
usually separated by 7 or 8 residues along the peptide chain. The Ser
residues are dehydrated to didehydroalanines, then bonded between
their beta carbons. The alpha carbonyl of the Cys condenses with alpha
carbon of the first Ser to form a pyridinyl ring. The ring may be
mutiply dehydrogenated to form a pyridine ring with loss of the amino
nitrogen of the first Ser. The amidation of Ser-17 probably does not
occur by the same mechanism, oxidative cleavage of glycine, as in
eukaryotes.
;
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_000223
_pdbx_molecule.asym_id A
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A DHA 4 A DHA 3 ? SER '2-AMINO-ACRYLIC ACID'
2 A BB9 7 A BB9 6 ? CYS ?
3 A DBU 9 A DBU 8 ? THR '(2Z)-2-AMINOBUT-2-ENOIC ACID'
4 A TS9 11 A TS9 10 ? ILE ?
5 A BB9 12 A BB9 11 ? CYS ?
6 A BB9 14 A BB9 13 ? CYS ?
7 A MH6 15 A MH6 14 ? SER '3-HYDROXY-2-IMINOPROPANOIC ACID'
8 A BB9 16 A BB9 15 ? CYS ?
9 A DHA 17 A DHA 16 ? SER '2-AMINO-ACRYLIC ACID'
10 A DHA 18 A DHA 17 ? SER '2-AMINO-ACRYLIC ACID'
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A HOH 2001 ? B HOH .
2 1 A HOH 2002 ? B HOH .
#
_pdbx_entry_details.entry_id 1E9W
_pdbx_entry_details.compound_details
;THIOSTREPTON IS A MEMBER OF A SULPHUR-RICH HETEROCYCLIC PEPTIDES
CLASS. ALL SHARE A MACROCYLIC CORE, CONSISTING OF A
NITROGEN CONTAINING, SIX-MEMBERED RING CENTRAL TO DEHYDROAMINO
ACIDS AND A SUBSET OF FIVE MEMBER RING STRUCTURES INCLUDING
THIAZOLES, THIAZOLINES AND OXAZOLES.
HERE, THIOSTREPTON IS REPRESENTED BY THE SEQUENCE (SEQRES)

GROUP: 1
NAME: THIOSTREPTON
CHAIN: A
COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 0 TO 18
DESCRIPTION: THIOSTREPTON IS A HETROCYCLIC THIOPEPTIDE,
CONSISTING OF FOUR THIAZOLES ONE THIOZOLINE
ONE PIPERIDEINE RINGS.
A MODIFIED QUINOLINE LINKED TO MAIN-CHAIN
RESIDUE 1 AND SIDE-CHAIN OF RESIDUE 12.
THE OBSERVED C-TERMINAL AMINO GROUP NH2(18) IS
LIKELY TO BE A POST-TRANSLATIONAL DECARBOXYLATED
REMNANT OF A SER C-TERMINAL RESIDUE
;
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
BB9 N N N N 14
BB9 CA C N N 15
BB9 C C N N 16
BB9 O O N N 17
BB9 CB C N N 18
BB9 SG S N N 19
BB9 OXT O N N 20
BB9 H H N N 21
BB9 H2 H N N 22
BB9 HB H N N 23
BB9 HXT H N N 24
BB9 HG H N N 25
DBU N N N N 26
DBU CA C N N 27
DBU CB C N N 28
DBU CG C N N 29
DBU C C N N 30
DBU O O N N 31
DBU OXT O N N 32
DBU H H N N 33
DBU H2 H N N 34
DBU HB H N N 35
DBU HG1 H N N 36
DBU HG2 H N N 37
DBU HG3 H N N 38
DBU HXT H N N 39
DCY N N N N 40
DCY CA C N S 41
DCY C C N N 42
DCY O O N N 43
DCY CB C N N 44
DCY SG S N N 45
DCY OXT O N N 46
DCY H H N N 47
DCY H2 H N N 48
DCY HA H N N 49
DCY HB2 H N N 50
DCY HB3 H N N 51
DCY HG H N N 52
DCY HXT H N N 53
DHA N N N N 54
DHA CA C N N 55
DHA CB C N N 56
DHA C C N N 57
DHA O O N N 58
DHA OXT O N N 59
DHA H H N N 60
DHA H2 H N N 61
DHA HB1 H N N 62
DHA HB2 H N N 63
DHA HXT H N N 64
HOH O O N N 65
HOH H1 H N N 66
HOH H2 H N N 67
ILE N N N N 68
ILE CA C N S 69
ILE C C N N 70
ILE O O N N 71
ILE CB C N S 72
ILE CG1 C N N 73
ILE CG2 C N N 74
ILE CD1 C N N 75
ILE OXT O N N 76
ILE H H N N 77
ILE H2 H N N 78
ILE HA H N N 79
ILE HB H N N 80
ILE HG12 H N N 81
ILE HG13 H N N 82
ILE HG21 H N N 83
ILE HG22 H N N 84
ILE HG23 H N N 85
ILE HD11 H N N 86
ILE HD12 H N N 87
ILE HD13 H N N 88
ILE HXT H N N 89
MH6 N N N N 90
MH6 CA C N N 91
MH6 C C N N 92
MH6 CB C N N 93
MH6 OG O N N 94
MH6 O O N N 95
MH6 OXT O N N 96
MH6 H H N N 97
MH6 HB2 H N N 98
MH6 HB3 H N N 99
MH6 HXT H N N 100
MH6 HG H N N 101
NH2 N N N N 102
NH2 HN1 H N N 103
NH2 HN2 H N N 104
QUA O12 O N N 105
QUA C11 C N N 106
QUA C2 C Y N 107
QUA N1 N Y N 108
QUA C3 C Y N 109
QUA C9 C Y N 110
QUA C4 C Y N 111
QUA C8 C N S 112
QUA C10 C Y N 113
QUA O16 O N N 114
QUA C7 C N N 115
QUA C13 C N S 116
QUA O15 O N N 117
QUA C5 C N N 118
QUA C14 C N N 119
QUA C6 C N N 120
QUA "O1'" O N N 121
QUA HC3 H N N 122
QUA HC8 H N N 123
QUA H16 H N N 124
QUA HC71 H N N 125
QUA HC72 H N N 126
QUA H13 H N N 127
QUA H15 H N N 128
QUA HC5 H N N 129
QUA H141 H N N 130
QUA H142 H N N 131
QUA H143 H N N 132
QUA HC6 H N N 133
QUA "H1'" H N N 134
SER N N N N 135
SER CA C N S 136
SER C C N N 137
SER O O N N 138
SER CB C N N 139
SER OG O N N 140
SER OXT O N N 141
SER H H N N 142
SER H2 H N N 143
SER HA H N N 144
SER HB2 H N N 145
SER HB3 H N N 146
SER HG H N N 147
SER HXT H N N 148
THR N N N N 149
THR CA C N S 150
THR C C N N 151
THR O O N N 152
THR CB C N R 153
THR OG1 O N N 154
THR CG2 C N N 155
THR OXT O N N 156
THR H H N N 157
THR H2 H N N 158
THR HA H N N 159
THR HB H N N 160
THR HG1 H N N 161
THR HG21 H N N 162
THR HG22 H N N 163
THR HG23 H N N 164
THR HXT H N N 165
TS9 N N N N 166
TS9 CA C N S 167
TS9 C C N N 168
TS9 CB C N S 169
TS9 OG3 O N N 170
TS9 CG2 C N N 171
TS9 CG1 C N R 172
TS9 OD2 O N N 173
TS9 CD1 C N N 174
TS9 OXT O N N 175
TS9 O O N N 176
TS9 H H N N 177
TS9 H2 H N N 178
TS9 HA H N N 179
TS9 HXT H N N 180
TS9 HG3 H N N 181
TS9 HG21 H N N 182
TS9 HG22 H N N 183
TS9 HG23 H N N 184
TS9 HG1 H N N 185
TS9 HD2 H N N 186
TS9 HD11 H N N 187
TS9 HD12 H N N 188
TS9 HD13 H N N 189
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
BB9 N CA sing N N 13
BB9 CA C sing N N 14
BB9 CA CB doub N N 15
BB9 C O doub N N 16
BB9 C OXT sing N Z 17
BB9 CB SG sing N N 18
BB9 N H sing N N 19
BB9 N H2 sing N N 20
BB9 CB HB sing N N 21
BB9 OXT HXT sing N N 22
BB9 SG HG sing N N 23
DBU N CA sing N N 24
DBU N H sing N N 25
DBU N H2 sing N N 26
DBU CA CB doub N Z 27
DBU CA C sing N N 28
DBU CB CG sing N N 29
DBU CB HB sing N N 30
DBU CG HG1 sing N N 31
DBU CG HG2 sing N N 32
DBU CG HG3 sing N N 33
DBU C O doub N N 34
DBU C OXT sing N N 35
DBU OXT HXT sing N N 36
DCY N CA sing N N 37
DCY N H sing N N 38
DCY N H2 sing N N 39
DCY CA C sing N N 40
DCY CA CB sing N N 41
DCY CA HA sing N N 42
DCY C O doub N N 43
DCY C OXT sing N N 44
DCY CB SG sing N N 45
DCY CB HB2 sing N N 46
DCY CB HB3 sing N N 47
DCY SG HG sing N N 48
DCY OXT HXT sing N N 49
DHA N CA sing N N 50
DHA N H sing N N 51
DHA N H2 sing N N 52
DHA CA CB doub N N 53
DHA CA C sing N N 54
DHA CB HB1 sing N N 55
DHA CB HB2 sing N N 56
DHA C O doub N N 57
DHA C OXT sing N N 58
DHA OXT HXT sing N N 59
HOH O H1 sing N N 60
HOH O H2 sing N N 61
ILE N CA sing N N 62
ILE N H sing N N 63
ILE N H2 sing N N 64
ILE CA C sing N N 65
ILE CA CB sing N N 66
ILE CA HA sing N N 67
ILE C O doub N N 68
ILE C OXT sing N N 69
ILE CB CG1 sing N N 70
ILE CB CG2 sing N N 71
ILE CB HB sing N N 72
ILE CG1 CD1 sing N N 73
ILE CG1 HG12 sing N N 74
ILE CG1 HG13 sing N N 75
ILE CG2 HG21 sing N N 76
ILE CG2 HG22 sing N N 77
ILE CG2 HG23 sing N N 78
ILE CD1 HD11 sing N N 79
ILE CD1 HD12 sing N N 80
ILE CD1 HD13 sing N N 81
ILE OXT HXT sing N N 82
MH6 N CA doub N N 83
MH6 CA C sing N N 84
MH6 CA CB sing N N 85
MH6 C O doub N N 86
MH6 C OXT sing N N 87
MH6 CB OG sing N N 88
MH6 N H sing N N 89
MH6 CB HB2 sing N N 90
MH6 CB HB3 sing N N 91
MH6 OXT HXT sing N N 92
MH6 OG HG sing N N 93
NH2 N HN1 sing N N 94
NH2 N HN2 sing N N 95
QUA O12 C11 doub N N 96
QUA C11 C2 sing N N 97
QUA C11 "O1'" sing N N 98
QUA C2 N1 doub Y N 99
QUA C2 C3 sing Y N 100
QUA N1 C9 sing Y N 101
QUA C3 C4 doub Y N 102
QUA C3 HC3 sing N N 103
QUA C9 C8 sing N N 104
QUA C9 C10 doub Y N 105
QUA C4 C10 sing Y N 106
QUA C4 C13 sing N N 107
QUA C8 O16 sing N N 108
QUA C8 C7 sing N N 109
QUA C8 HC8 sing N N 110
QUA C10 C5 sing N N 111
QUA O16 H16 sing N N 112
QUA C7 C6 sing N N 113
QUA C7 HC71 sing N N 114
QUA C7 HC72 sing N N 115
QUA C13 O15 sing N N 116
QUA C13 C14 sing N N 117
QUA C13 H13 sing N N 118
QUA O15 H15 sing N N 119
QUA C5 C6 doub N N 120
QUA C5 HC5 sing N N 121
QUA C14 H141 sing N N 122
QUA C14 H142 sing N N 123
QUA C14 H143 sing N N 124
QUA C6 HC6 sing N N 125
QUA "O1'" "H1'" sing N N 126
SER N CA sing N N 127
SER N H sing N N 128
SER N H2 sing N N 129
SER CA C sing N N 130
SER CA CB sing N N 131
SER CA HA sing N N 132
SER C O doub N N 133
SER C OXT sing N N 134
SER CB OG sing N N 135
SER CB HB2 sing N N 136
SER CB HB3 sing N N 137
SER OG HG sing N N 138
SER OXT HXT sing N N 139
THR N CA sing N N 140
THR N H sing N N 141
THR N H2 sing N N 142
THR CA C sing N N 143
THR CA CB sing N N 144
THR CA HA sing N N 145
THR C O doub N N 146
THR C OXT sing N N 147
THR CB OG1 sing N N 148
THR CB CG2 sing N N 149
THR CB HB sing N N 150
THR OG1 HG1 sing N N 151
THR CG2 HG21 sing N N 152
THR CG2 HG22 sing N N 153
THR CG2 HG23 sing N N 154
THR OXT HXT sing N N 155
TS9 N CA sing N N 156
TS9 CA C sing N N 157
TS9 CA CB sing N N 158
TS9 C OXT sing N N 159
TS9 C O doub N N 160
TS9 CB OG3 sing N N 161
TS9 CB CG2 sing N N 162
TS9 CB CG1 sing N N 163
TS9 CG1 OD2 sing N N 164
TS9 CG1 CD1 sing N N 165
TS9 N H sing N N 166
TS9 N H2 sing N N 167
TS9 CA HA sing N N 168
TS9 OXT HXT sing N N 169
TS9 OG3 HG3 sing N N 170
TS9 CG2 HG21 sing N N 171
TS9 CG2 HG22 sing N N 172
TS9 CG2 HG23 sing N N 173
TS9 CG1 HG1 sing N N 174
TS9 OD2 HD2 sing N N 175
TS9 CD1 HD11 sing N N 176
TS9 CD1 HD12 sing N N 177
TS9 CD1 HD13 sing N N 178
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type other
_pdbx_initial_refinement_model.source_name ?
_pdbx_initial_refinement_model.details 'SEE REFERENCE'
#
_atom_sites.entry_id 1E9W
_atom_sites.fract_transf_matrix[1][1] 0.037627
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.037627
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.036448
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 . QUA A 1 1 ? 5.986 15.455 3.268 1.00 5.69 ? 0 QUA A O12 1
HETATM 2 C C11 . QUA A 1 1 ? 5.489 16.562 3.304 1.00 4.96 ? 0 QUA A C11 1
HETATM 3 C C2 . QUA A 1 1 ? 4.026 16.812 3.116 1.00 5.41 ? 0 QUA A C2 1
HETATM 4 N N1 . QUA A 1 1 ? 3.556 18.058 3.277 1.00 5.15 ? 0 QUA A N1 1
HETATM 5 C C3 . QUA A 1 1 ? 3.231 15.694 2.762 1.00 5.48 ? 0 QUA A C3 1
HETATM 6 C C9 . QUA A 1 1 ? 2.214 18.239 3.063 1.00 5.35 ? 0 QUA A C9 1
HETATM 7 C C4 . QUA A 1 1 ? 1.913 15.885 2.561 1.00 6.30 ? 0 QUA A C4 1
HETATM 8 C C8 . QUA A 1 1 ? 1.776 19.658 3.083 1.00 5.60 ? 0 QUA A C8 1
HETATM 9 C C10 . QUA A 1 1 ? 1.347 17.197 2.689 1.00 5.70 ? 0 QUA A C10 1
HETATM 10 O O16 . QUA A 1 1 ? 1.918 20.224 1.792 1.00 5.73 ? 0 QUA A O16 1
HETATM 11 C C7 . QUA A 1 1 ? 0.246 19.806 3.460 1.00 6.78 ? 0 QUA A C7 1
HETATM 12 C C13 . QUA A 1 1 ? 1.008 14.660 2.217 1.00 7.60 ? 0 QUA A C13 1
HETATM 13 O O15 . QUA A 1 1 ? 1.706 13.660 1.672 1.00 12.39 ? 0 QUA A O15 1
HETATM 14 C C5 . QUA A 1 1 ? -0.050 17.569 2.444 1.00 7.11 ? 0 QUA A C5 1
HETATM 15 C C14 . QUA A 1 1 ? 0.236 14.225 3.454 1.00 12.59 ? 0 QUA A C14 1
HETATM 16 C C6 . QUA A 1 1 ? -0.559 18.707 2.781 1.00 6.74 ? 0 QUA A C6 1
ATOM 17 N N . ILE A 1 2 ? 0.045 19.626 4.935 1.00 6.15 ? 1 ILE A N 1
ATOM 18 C CA . ILE A 1 2 ? 0.719 20.679 5.730 1.00 6.35 ? 1 ILE A CA 1
ATOM 19 C C . ILE A 1 2 ? 1.938 20.138 6.434 1.00 5.87 ? 1 ILE A C 1
ATOM 20 O O . ILE A 1 2 ? 2.768 20.870 6.961 1.00 7.23 ? 1 ILE A O 1
ATOM 21 C CB . ILE A 1 2 ? -0.196 21.406 6.740 1.00 7.69 ? 1 ILE A CB 1
ATOM 22 C CG1 . ILE A 1 2 ? -0.861 20.395 7.643 1.00 10.72 ? 1 ILE A CG1 1
ATOM 23 C CG2 . ILE A 1 2 ? -1.194 22.309 6.006 1.00 8.64 ? 1 ILE A CG2 1
ATOM 24 C CD1 . ILE A 1 2 ? -1.499 21.046 8.972 1.00 20.14 ? 1 ILE A CD1 1
ATOM 25 N N . ALA A 1 3 ? 2.085 18.779 6.401 1.00 6.28 ? 2 ALA A N 1
ATOM 26 C CA . ALA A 1 3 ? 3.240 18.131 6.939 1.00 7.24 ? 2 ALA A CA 1
ATOM 27 C C . ALA A 1 3 ? 3.107 16.623 6.451 1.00 6.13 ? 2 ALA A C 1
ATOM 28 O O . ALA A 1 3 ? 2.088 16.161 6.076 1.00 7.06 ? 2 ALA A O 1
ATOM 29 C CB . ALA A 1 3 ? 3.200 18.048 8.489 1.00 10.02 ? 2 ALA A CB 1
HETATM 30 N N . DHA A 1 4 ? 4.320 15.965 6.540 1.00 6.10 ? 3 DHA A N 1
HETATM 31 C CA . DHA A 1 4 ? 4.571 14.641 6.101 1.00 6.09 ? 3 DHA A CA 1
HETATM 32 C CB . DHA A 1 4 ? 3.649 13.727 5.845 1.00 6.68 ? 3 DHA A CB 1
HETATM 33 C C . DHA A 1 4 ? 6.042 14.493 5.995 1.00 5.59 ? 3 DHA A C 1
HETATM 34 O O . DHA A 1 4 ? 6.808 15.445 6.291 1.00 6.40 ? 3 DHA A O 1
ATOM 35 N N . ALA A 1 5 ? 6.513 13.340 5.479 1.00 6.08 ? 4 ALA A N 1
ATOM 36 C CA . ALA A 1 5 ? 7.883 13.229 4.974 1.00 6.24 ? 4 ALA A CA 1
ATOM 37 C C . ALA A 1 5 ? 7.760 12.622 3.557 1.00 6.70 ? 4 ALA A C 1
ATOM 38 O O . ALA A 1 5 ? 7.219 11.560 3.383 1.00 8.22 ? 4 ALA A O 1
ATOM 39 C CB . ALA A 1 5 ? 8.698 12.296 5.799 1.00 7.24 ? 4 ALA A CB 1
ATOM 40 N N . SER A 1 6 ? 8.278 13.422 2.559 1.00 6.28 ? 5 SER A N 1
ATOM 41 C CA . SER A 1 6 ? 8.193 13.000 1.123 1.00 6.18 ? 5 SER A CA 1
ATOM 42 C C . SER A 1 6 ? 6.836 13.094 0.622 1.00 7.01 ? 5 SER A C 1
ATOM 43 C CB . SER A 1 6 ? 8.785 11.586 0.940 1.00 7.09 ? 5 SER A CB 1
HETATM 44 N N . BB9 A 1 7 ? 6.205 14.155 0.198 1.00 6.05 ? 6 BB9 A N 1
HETATM 45 C CA . BB9 A 1 7 ? 4.901 13.936 -0.109 1.00 6.84 ? 6 BB9 A CA 1
HETATM 46 C C . BB9 A 1 7 ? 4.061 14.990 -0.577 1.00 6.56 ? 6 BB9 A C 1
HETATM 47 O O . BB9 A 1 7 ? 2.783 14.877 -0.613 1.00 7.90 ? 6 BB9 A O 1
HETATM 48 C CB . BB9 A 1 7 ? 4.484 12.601 0.180 1.00 10.84 ? 6 BB9 A CB 1
HETATM 49 S SG . BB9 A 1 7 ? 5.775 11.701 0.688 1.00 11.34 ? 6 BB9 A SG 1
ATOM 50 N N . THR A 1 8 ? 4.653 16.079 -1.038 1.00 6.01 ? 7 THR A N 1
ATOM 51 C CA . THR A 1 8 ? 3.936 17.243 -1.470 1.00 6.05 ? 7 THR A CA 1
ATOM 52 C C . THR A 1 8 ? 4.770 17.969 -2.493 1.00 5.82 ? 7 THR A C 1
ATOM 53 O O . THR A 1 8 ? 5.900 17.598 -2.771 1.00 7.98 ? 7 THR A O 1
ATOM 54 C CB . THR A 1 8 ? 3.608 18.094 -0.244 1.00 5.51 ? 7 THR A CB 1
ATOM 55 O OG1 . THR A 1 8 ? 2.539 19.005 -0.627 1.00 6.05 ? 7 THR A OG1 1
ATOM 56 C CG2 . THR A 1 8 ? 4.842 18.933 0.288 1.00 6.32 ? 7 THR A CG2 1
HETATM 57 N N . DBU A 1 9 ? 4.148 19.046 -3.025 1.00 6.75 ? 8 DBU A N 1
HETATM 58 C CA . DBU A 1 9 ? 4.786 19.889 -4.050 1.00 7.31 ? 8 DBU A CA 1
HETATM 59 C CB . DBU A 1 9 ? 5.190 19.455 -5.236 1.00 9.94 ? 8 DBU A CB 1
HETATM 60 C CG . DBU A 1 9 ? 5.119 17.992 -5.699 1.00 11.58 ? 8 DBU A CG 1
HETATM 61 C C . DBU A 1 9 ? 4.884 21.281 -3.727 1.00 7.55 ? 8 DBU A C 1
HETATM 62 N N . DCY A 1 10 ? 4.551 21.770 -2.577 1.00 7.33 ? 9 DCY A N 1
HETATM 63 C CA . DCY A 1 10 ? 4.548 23.238 -2.615 1.00 9.04 ? 9 DCY A CA 1
HETATM 64 C C . DCY A 1 10 ? 4.945 23.889 -1.309 1.00 9.07 ? 9 DCY A C 1
HETATM 65 O O . DCY A 1 10 ? 5.100 25.079 -1.296 1.00 17.74 ? 9 DCY A O 1
HETATM 66 C CB . DCY A 1 10 ? 5.446 23.716 -3.764 1.00 12.84 ? 9 DCY A CB 1
HETATM 67 S SG . DCY A 1 10 ? 5.325 22.401 -4.997 1.00 10.02 ? 9 DCY A SG 1
HETATM 68 N N . TS9 A 1 11 ? 4.955 23.127 -0.222 1.00 7.00 ? 10 TS9 A N 1
HETATM 69 C CA . TS9 A 1 11 ? 5.327 23.688 1.090 1.00 6.73 ? 10 TS9 A CA 1
HETATM 70 C C . TS9 A 1 11 ? 6.705 23.165 1.468 1.00 6.19 ? 10 TS9 A C 1
HETATM 71 C CB . TS9 A 1 11 ? 4.269 23.337 2.173 1.00 6.56 ? 10 TS9 A CB 1
HETATM 72 O OG3 . TS9 A 1 11 ? 3.991 21.946 2.127 1.00 6.17 ? 10 TS9 A OG3 1
HETATM 73 C CG2 . TS9 A 1 11 ? 4.766 23.744 3.523 1.00 7.92 ? 10 TS9 A CG2 1
HETATM 74 C CG1 . TS9 A 1 11 ? 2.931 24.042 1.809 1.00 9.05 ? 10 TS9 A CG1 1
HETATM 75 O OD2 . TS9 A 1 11 ? 3.225 25.458 1.751 1.00 14.73 ? 10 TS9 A OD2 1
HETATM 76 C CD1 . TS9 A 1 11 ? 1.767 23.757 2.766 1.00 10.37 ? 10 TS9 A CD1 1
HETATM 77 N N . BB9 A 1 12 ? 7.007 21.947 1.717 1.00 5.11 ? 11 BB9 A N 1
HETATM 78 C CA . BB9 A 1 12 ? 8.322 21.813 1.893 1.00 5.68 ? 11 BB9 A CA 1
HETATM 79 C C . BB9 A 1 12 ? 8.927 20.515 2.249 1.00 5.58 ? 11 BB9 A C 1
HETATM 80 O O . BB9 A 1 12 ? 10.162 20.353 2.304 1.00 6.68 ? 11 BB9 A O 1
HETATM 81 C CB . BB9 A 1 12 ? 9.106 22.991 1.786 1.00 7.26 ? 11 BB9 A CB 1
HETATM 82 S SG . BB9 A 1 12 ? 8.068 24.261 1.407 1.00 8.72 ? 11 BB9 A SG 1
ATOM 83 N N . THR A 1 13 ? 8.010 19.538 2.476 1.00 5.64 ? 12 THR A N 1
ATOM 84 C CA . THR A 1 13 ? 8.438 18.213 2.841 1.00 5.28 ? 12 THR A CA 1
ATOM 85 C C . THR A 1 13 ? 8.534 17.277 1.631 1.00 5.27 ? 12 THR A C 1
ATOM 86 C CB . THR A 1 13 ? 7.569 17.611 3.936 1.00 5.56 ? 12 THR A CB 1
ATOM 87 O OG1 . THR A 1 13 ? 6.149 17.695 3.521 1.00 5.14 ? 12 THR A OG1 1
ATOM 88 C CG2 . THR A 1 13 ? 7.663 18.414 5.254 1.00 6.10 ? 12 THR A CG2 1
HETATM 89 N N . BB9 A 1 14 ? 8.786 16.014 1.733 1.00 5.60 ? 13 BB9 A N 1
HETATM 90 C CA . BB9 A 1 14 ? 8.854 15.432 0.475 1.00 5.71 ? 13 BB9 A CA 1
HETATM 91 C C . BB9 A 1 14 ? 9.172 13.971 0.361 1.00 6.38 ? 13 BB9 A C 1
HETATM 92 C CB . BB9 A 1 14 ? 8.661 16.299 -0.544 1.00 5.90 ? 13 BB9 A CB 1
HETATM 93 S SG . BB9 A 1 14 ? 8.342 17.870 0.040 1.00 6.06 ? 13 BB9 A SG 1
HETATM 94 N N . MH6 A 1 15 ? 10.571 13.840 0.808 1.00 7.14 ? 14 MH6 A N 1
HETATM 95 C CA . MH6 A 1 15 ? 10.960 12.736 1.335 1.00 7.50 ? 14 MH6 A CA 1
HETATM 96 C C . MH6 A 1 15 ? 12.412 12.708 1.798 1.00 9.62 ? 14 MH6 A C 1
HETATM 97 C CB . MH6 A 1 15 ? 10.166 11.525 1.580 1.00 8.56 ? 14 MH6 A CB 1
HETATM 98 N N . BB9 A 1 16 ? 12.953 11.629 2.281 1.00 10.82 ? 15 BB9 A N 1
HETATM 99 C CA . BB9 A 1 16 ? 14.227 11.801 2.611 1.00 12.61 ? 15 BB9 A CA 1
HETATM 100 C C . BB9 A 1 16 ? 15.102 10.825 3.216 1.00 12.71 ? 15 BB9 A C 1
HETATM 101 O O . BB9 A 1 16 ? 16.104 10.920 3.583 1.00 15.83 ? 15 BB9 A O 1
HETATM 102 C CB . BB9 A 1 16 ? 14.747 13.175 2.250 1.00 14.30 ? 15 BB9 A CB 1
HETATM 103 S SG . BB9 A 1 16 ? 13.401 14.022 1.667 1.00 15.73 ? 15 BB9 A SG 1
HETATM 104 N N . DHA A 1 17 ? 14.395 9.649 3.363 1.00 12.87 ? 16 DHA A N 1
HETATM 105 C CA . DHA A 1 17 ? 14.879 8.253 3.824 1.00 14.69 ? 16 DHA A CA 1
HETATM 106 C CB . DHA A 1 17 ? 15.926 7.972 4.573 1.00 27.84 ? 16 DHA A CB 1
HETATM 107 C C . DHA A 1 17 ? 14.138 7.122 3.456 1.00 14.66 ? 16 DHA A C 1
HETATM 108 O O . DHA A 1 17 ? 13.306 7.397 2.630 1.00 13.98 ? 16 DHA A O 1
HETATM 109 N N . DHA A 1 18 ? 14.309 6.037 4.008 1.00 20.50 ? 17 DHA A N 1
HETATM 110 C CA . DHA A 1 18 ? 13.661 4.777 3.868 1.00 16.41 ? 17 DHA A CA 1
HETATM 111 C CB . DHA A 1 18 ? 12.553 4.655 3.163 1.00 16.54 ? 17 DHA A CB 1
HETATM 112 C C . DHA A 1 18 ? 14.479 3.622 4.272 0.50 11.76 ? 17 DHA A C 1
HETATM 113 O O . DHA A 1 18 ? 15.518 3.798 4.837 0.33 20.74 ? 17 DHA A O 1
HETATM 114 N N . NH2 A 1 19 ? 14.038 2.376 3.997 0.50 14.93 ? 18 NH2 A N 1
HETATM 115 O O . HOH B 2 . ? 5.469 21.108 6.859 0.50 8.65 ? 2001 HOH A O 1
HETATM 116 O O . HOH B 2 . ? 2.787 23.790 6.859 0.50 9.40 ? 2002 HOH A O 1
HETATM 117 O O . HOH B 2 . ? 8.885 15.358 8.419 1.00 23.36 ? 2003 HOH A O 1
HETATM 118 O O . HOH B 2 . ? 5.162 20.395 3.991 1.00 6.44 ? 2004 HOH A O 1
#
loop_
_atom_site_anisotrop.id
_atom_site_anisotrop.type_symbol
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_alt_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.pdbx_PDB_ins_code
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
1 O O12 . QUA A 1 ? 0.0992 0.0584 0.0587 0.0015 -0.0080 0.0018 0 QUA A O12
2 C C11 . QUA A 1 ? 0.0778 0.0640 0.0465 -0.0118 0.0000 0.0064 0 QUA A C11
3 C C2 . QUA A 1 ? 0.0783 0.0805 0.0468 -0.0079 0.0002 0.0030 0 QUA A C2
4 N N1 . QUA A 1 ? 0.0728 0.0689 0.0541 -0.0058 -0.0048 0.0017 0 QUA A N1
5 C C3 . QUA A 1 ? 0.0690 0.0859 0.0532 -0.0193 0.0036 -0.0001 0 QUA A C3
6 C C9 . QUA A 1 ? 0.0668 0.0949 0.0415 -0.0098 -0.0019 0.0006 0 QUA A C9
7 C C4 . QUA A 1 ? 0.0821 0.0929 0.0644 -0.0271 0.0031 -0.0072 0 QUA A C4
8 C C8 . QUA A 1 ? 0.0579 0.0960 0.0588 0.0011 0.0061 -0.0006 0 QUA A C8
9 C C10 . QUA A 1 ? 0.0686 0.0998 0.0480 -0.0210 0.0096 -0.0040 0 QUA A C10
10 O O16 . QUA A 1 ? 0.0744 0.0911 0.0521 0.0073 0.0006 -0.0024 0 QUA A O16
11 C C7 . QUA A 1 ? 0.0621 0.1375 0.0582 -0.0003 -0.0002 -0.0240 0 QUA A C7
12 C C13 . QUA A 1 ? 0.1004 0.1039 0.0846 -0.0480 0.0107 -0.0195 0 QUA A C13
13 O O15 . QUA A 1 ? 0.1607 0.1031 0.2069 -0.0534 0.0246 -0.0629 0 QUA A O15
14 C C5 . QUA A 1 ? 0.0666 0.1480 0.0554 -0.0131 0.0126 -0.0214 0 QUA A C5
15 C C14 . QUA A 1 ? 0.1523 0.2067 0.1193 -0.1019 0.0169 0.0186 0 QUA A C14
16 C C6 . QUA A 1 ? 0.0653 0.1414 0.0493 -0.0192 0.0022 -0.0054 0 QUA A C6
17 N N . ILE A 2 ? 0.0700 0.1007 0.0628 0.0057 0.0003 -0.0048 1 ILE A N
18 C CA . ILE A 2 ? 0.0726 0.1045 0.0642 0.0162 -0.0092 -0.0227 1 ILE A CA
19 C C . ILE A 2 ? 0.0700 0.0837 0.0692 0.0108 -0.0096 -0.0157 1 ILE A C
20 O O . ILE A 2 ? 0.0902 0.0834 0.1012 0.0209 -0.0283 -0.0241 1 ILE A O
21 C CB . ILE A 2 ? 0.0885 0.1034 0.1002 0.0178 0.0059 -0.0175 1 ILE A CB
22 C CG1 . ILE A 2 ? 0.1517 0.1315 0.1241 0.0015 0.0421 -0.0016 1 ILE A CG1
23 C CG2 . ILE A 2 ? 0.0618 0.1139 0.1524 0.0149 -0.0225 -0.0136 1 ILE A CG2
24 C CD1 . ILE A 2 ? 0.2837 0.3477 0.1339 -0.0097 0.0800 -0.0510 1 ILE A CD1
25 N N . ALA A 3 ? 0.0858 0.0913 0.0617 0.0175 -0.0091 -0.0161 2 ALA A N
26 C CA . ALA A 3 ? 0.1070 0.0794 0.0888 0.0351 -0.0303 -0.0289 2 ALA A CA
27 C C . ALA A 3 ? 0.0910 0.0778 0.0640 0.0002 0.0006 -0.0131 2 ALA A C
28 O O . ALA A 3 ? 0.0946 0.0917 0.0821 -0.0073 0.0007 -0.0230 2 ALA A O
29 C CB . ALA A 3 ? 0.1782 0.1138 0.0887 0.0706 -0.0528 -0.0370 2 ALA A CB
30 N N . DHA A 4 ? 0.1041 0.0633 0.0643 0.0200 -0.0012 -0.0123 3 DHA A N
31 C CA . DHA A 4 ? 0.1093 0.0630 0.0590 0.0088 0.0001 0.0083 3 DHA A CA
32 C CB . DHA A 4 ? 0.1266 0.0642 0.0629 -0.0112 -0.0123 0.0110 3 DHA A CB
33 C C . DHA A 4 ? 0.1032 0.0584 0.0507 0.0159 -0.0060 0.0041 3 DHA A C
34 O O . DHA A 4 ? 0.1037 0.0655 0.0740 0.0084 -0.0138 -0.0017 3 DHA A O
35 N N . ALA A 5 ? 0.1055 0.0620 0.0633 0.0064 0.0095 0.0032 4 ALA A N
36 C CA . ALA A 5 ? 0.1040 0.0768 0.0562 0.0171 0.0154 0.0049 4 ALA A CA
37 C C . ALA A 5 ? 0.1105 0.0692 0.0750 0.0080 0.0170 -0.0018 4 ALA A C
38 O O . ALA A 5 ? 0.1756 0.0632 0.0736 -0.0086 0.0242 -0.0067 4 ALA A O
39 C CB . ALA A 5 ? 0.1194 0.0804 0.0751 0.0205 0.0177 0.0069 4 ALA A CB
40 N N . SER A 6 ? 0.1125 0.0735 0.0524 0.0077 0.0073 -0.0050 5 SER A N
41 C CA . SER A 6 ? 0.1039 0.0740 0.0568 0.0059 0.0003 -0.0054 5 SER A CA
42 C C . SER A 6 ? 0.1048 0.0800 0.0816 -0.0151 -0.0087 0.0058 5 SER A C
43 C CB . SER A 6 ? 0.1291 0.0743 0.0661 0.0134 0.0052 -0.0177 5 SER A CB
44 N N . BB9 A 7 ? 0.0943 0.0811 0.0546 -0.0072 0.0077 -0.0094 6 BB9 A N
45 C CA . BB9 A 7 ? 0.0945 0.0947 0.0708 -0.0133 -0.0019 0.0034 6 BB9 A CA
46 C C . BB9 A 7 ? 0.0765 0.1115 0.0611 -0.0183 0.0102 0.0026 6 BB9 A C
47 O O . BB9 A 7 ? 0.0814 0.1218 0.0969 -0.0215 -0.0013 -0.0126 6 BB9 A O
48 C CB . BB9 A 7 ? 0.1308 0.0944 0.1865 -0.0297 -0.0398 0.0042 6 BB9 A CB
49 S SG . BB9 A 7 ? 0.1360 0.0881 0.2067 -0.0322 -0.0208 0.0320 6 BB9 A SG
50 N N . THR A 8 ? 0.0844 0.0853 0.0588 -0.0020 0.0014 -0.0100 7 THR A N
51 C CA . THR A 8 ? 0.0766 0.0942 0.0592 -0.0023 0.0039 0.0006 7 THR A CA
52 C C . THR A 8 ? 0.0666 0.1072 0.0473 0.0034 -0.0053 -0.0037 7 THR A C
53 O O . THR A 8 ? 0.0986 0.1258 0.0788 0.0230 0.0115 0.0181 7 THR A O
54 C CB . THR A 8 ? 0.0560 0.0995 0.0538 0.0072 -0.0084 -0.0003 7 THR A CB
55 O OG1 . THR A 8 ? 0.0642 0.0988 0.0670 0.0015 -0.0088 -0.0006 7 THR A OG1
56 C CG2 . THR A 8 ? 0.0634 0.1066 0.0702 -0.0045 -0.0041 -0.0071 7 THR A CG2
57 N N . DBU A 9 ? 0.0712 0.1274 0.0578 -0.0002 -0.0107 0.0103 8 DBU A N
58 C CA . DBU A 9 ? 0.0755 0.1345 0.0679 0.0080 0.0003 0.0173 8 DBU A CA
59 C CB . DBU A 9 ? 0.1245 0.1787 0.0745 0.0431 0.0243 0.0269 8 DBU A CB
60 C CG . DBU A 9 ? 0.1828 0.1936 0.0637 0.0430 0.0222 -0.0102 8 DBU A CG
61 C C . DBU A 9 ? 0.0725 0.1418 0.0726 0.0085 -0.0159 0.0306 8 DBU A C
62 N N . DCY A 10 ? 0.0818 0.1235 0.0732 -0.0129 -0.0160 0.0221 9 DCY A N
63 C CA . DCY A 10 ? 0.1145 0.1272 0.1017 -0.0138 -0.0297 0.0244 9 DCY A CA
64 C C . DCY A 10 ? 0.1483 0.0897 0.1067 0.0051 -0.0058 0.0217 9 DCY A C
65 O O . DCY A 10 ? 0.4223 0.1258 0.1258 -0.0856 -0.0667 0.0487 9 DCY A O
66 C CB . DCY A 10 ? 0.2284 0.1642 0.0951 -0.0437 -0.0141 0.0620 9 DCY A CB
67 S SG . DCY A 10 ? 0.1127 0.1744 0.0938 -0.0118 -0.0006 0.0539 9 DCY A SG
68 N N . TS9 A 11 ? 0.0915 0.0914 0.0833 -0.0147 -0.0217 0.0101 10 TS9 A N
69 C CA . TS9 A 11 ? 0.0808 0.0773 0.0975 -0.0022 -0.0215 0.0042 10 TS9 A CA
70 C C . TS9 A 11 ? 0.0795 0.0749 0.0809 -0.0022 -0.0173 -0.0005 10 TS9 A C
71 C CB . TS9 A 11 ? 0.0770 0.0743 0.0978 0.0076 -0.0198 -0.0150 10 TS9 A CB
72 O OG3 . TS9 A 11 ? 0.0688 0.0780 0.0878 0.0026 -0.0141 -0.0063 10 TS9 A OG3
73 C CG2 . TS9 A 11 ? 0.0974 0.0951 0.1082 0.0058 -0.0200 -0.0213 10 TS9 A CG2
74 C CG1 . TS9 A 11 ? 0.0774 0.0953 0.1712 0.0157 -0.0256 -0.0107 10 TS9 A CG1
75 O OD2 . TS9 A 11 ? 0.1323 0.0863 0.3411 0.0327 -0.0035 0.0415 10 TS9 A OD2
76 C CD1 . TS9 A 11 ? 0.0764 0.1475 0.1702 0.0013 -0.0214 -0.0284 10 TS9 A CD1
77 N N . BB9 A 12 ? 0.0631 0.0594 0.0716 -0.0131 -0.0092 0.0049 11 BB9 A N
78 C CA . BB9 A 12 ? 0.0614 0.0804 0.0740 -0.0037 -0.0074 -0.0012 11 BB9 A CA
79 C C . BB9 A 12 ? 0.0651 0.0763 0.0706 -0.0068 -0.0090 0.0058 11 BB9 A C
80 O O . BB9 A 12 ? 0.0632 0.0825 0.1081 -0.0055 -0.0181 0.0053 11 BB9 A O
81 C CB . BB9 A 12 ? 0.0886 0.0820 0.1052 -0.0275 -0.0168 0.0135 11 BB9 A CB
82 S SG . BB9 A 12 ? 0.0977 0.0783 0.1554 -0.0244 -0.0310 0.0222 11 BB9 A SG
83 N N . THR A 13 ? 0.0733 0.0700 0.0710 -0.0063 -0.0051 0.0032 12 THR A N
84 C CA . THR A 13 ? 0.0546 0.0696 0.0763 0.0044 -0.0091 0.0058 12 THR A CA
85 C C . THR A 13 ? 0.0518 0.0745 0.0740 -0.0053 -0.0069 0.0047 12 THR A C
86 C CB . THR A 13 ? 0.0733 0.0718 0.0663 -0.0129 -0.0164 -0.0007 12 THR A CB
87 O OG1 . THR A 13 ? 0.0679 0.0649 0.0625 -0.0017 -0.0130 0.0009 12 THR A OG1
88 C CG2 . THR A 13 ? 0.0832 0.0817 0.0671 -0.0064 -0.0140 -0.0061 12 THR A CG2
89 N N . BB9 A 14 ? 0.0712 0.0745 0.0672 -0.0066 -0.0056 0.0037 13 BB9 A N
90 C CA . BB9 A 14 ? 0.0707 0.0830 0.0634 -0.0058 -0.0018 0.0005 13 BB9 A CA
91 C C . BB9 A 14 ? 0.0933 0.0921 0.0569 0.0003 0.0050 -0.0002 13 BB9 A C
92 C CB . BB9 A 14 ? 0.0679 0.0916 0.0646 -0.0076 0.0031 0.0051 13 BB9 A CB
93 S SG . BB9 A 14 ? 0.0649 0.0890 0.0763 -0.0058 -0.0046 0.0149 13 BB9 A SG
94 N N . MH6 A 15 ? 0.0950 0.1049 0.0714 0.0116 0.0029 -0.0164 14 MH6 A N
95 C CA . MH6 A 15 ? 0.1093 0.1033 0.0724 0.0293 -0.0016 -0.0299 14 MH6 A CA
96 C C . MH6 A 15 ? 0.1205 0.1236 0.1216 0.0582 -0.0100 -0.0469 14 MH6 A C
97 C CB . MH6 A 15 ? 0.1475 0.0835 0.0942 0.0328 -0.0055 -0.0210 14 MH6 A CB
98 N N . BB9 A 16 ? 0.1425 0.1638 0.1049 0.0872 -0.0208 -0.0569 15 BB9 A N
99 C CA . BB9 A 16 ? 0.1480 0.1882 0.1428 0.0723 -0.0459 -0.0545 15 BB9 A CA
100 C C . BB9 A 16 ? 0.1433 0.1787 0.1607 0.0787 -0.0641 -0.0838 15 BB9 A C
101 O O . BB9 A 16 ? 0.1750 0.2027 0.2237 0.0739 -0.0990 -0.0463 15 BB9 A O
102 C CB . BB9 A 16 ? 0.1408 0.1738 0.2289 0.0698 -0.0535 -0.0821 15 BB9 A CB
103 S SG . BB9 A 16 ? 0.1381 0.1347 0.3248 0.0420 -0.0954 -0.0939 15 BB9 A SG
104 N N . DHA A 17 ? 0.1710 0.1787 0.1393 0.0868 -0.0192 -0.0524 16 DHA A N
105 C CA . DHA A 17 ? 0.2303 0.1928 0.1349 0.1047 -0.0162 -0.0356 16 DHA A CA
106 C CB . DHA A 17 ? 0.5048 0.2518 0.3013 0.2254 -0.2723 -0.1557 16 DHA A CB
107 C C . DHA A 17 ? 0.1976 0.1720 0.1874 0.1059 0.0349 -0.0096 16 DHA A C
108 O O . DHA A 17 ? 0.1815 0.1928 0.1568 0.0492 0.0379 -0.0086 16 DHA A O
109 N N . DHA A 18 ? 0.2618 0.1889 0.3283 0.0818 -0.0472 0.0362 17 DHA A N
110 C CA . DHA A 18 ? 0.2484 0.2044 0.1708 0.0558 0.0048 0.0246 17 DHA A CA
111 C CB . DHA A 18 ? 0.1873 0.2354 0.2059 0.0745 0.0378 0.0342 17 DHA A CB
112 C C . DHA A 18 ? 0.1489 0.1582 0.1395 -0.0378 0.0032 0.0506 17 DHA A C
113 O O . DHA A 18 ? 0.3530 0.0713 0.3638 -0.0453 -0.2207 0.0398 17 DHA A O
114 N N . NH2 A 19 ? 0.1540 0.1735 0.2396 -0.0197 -0.0706 -0.0012 18 NH2 A N
115 O O . HOH B . ? 0.0973 0.0973 0.1340 0.0427 -0.0498 -0.0498 2001 HOH A O
116 O O . HOH B . ? 0.0960 0.0960 0.1650 0.0186 -0.0323 -0.0323 2002 HOH A O
117 O O . HOH B . ? 0.3236 0.1353 0.4288 -0.0632 -0.0207 -0.0648 2003 HOH A O
118 O O . HOH B . ? 0.0741 0.0770 0.0936 0.0097 -0.0155 0.0058 2004 HOH A O
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