data_1DNZ
#
_entry.id 1DNZ
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1DNZ pdb_00001dnz 10.2210/pdb1dnz/pdb
NDB AD0006 ? ?
RCSB RCSB010235 ? ?
WWPDB D_1000010235 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2000-04-10
2 'Structure model' 1 1 2008-04-27
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2017-10-04
5 'Structure model' 1 4 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Refinement description'
4 5 'Structure model' 'Data collection'
5 5 'Structure model' 'Database references'
6 5 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' software
2 5 'Structure model' chem_comp_atom
3 5 'Structure model' chem_comp_bond
4 5 'Structure model' database_2
5 5 'Structure model' pdbx_struct_conn_angle
6 5 'Structure model' struct_conn
7 5 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_database_2.pdbx_DOI'
2 5 'Structure model' '_database_2.pdbx_database_accession'
3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'
5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'
7 5 'Structure model' '_pdbx_struct_conn_angle.value'
8 5 'Structure model' '_struct_conn.pdbx_dist_value'
9 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
10 5 'Structure model' '_struct_conn.ptnr2_symmetry'
11 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
12 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
13 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1DNZ
_pdbx_database_status.recvd_initial_deposition_date 1999-12-17
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 1D1B . unspecified
PDB 212D . unspecified
PDB 221D . unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Robinson, H.' 1
'Gao, Y.-G.' 2
'Sanishvili, R.' 3
'Joachimiak, A.' 4
'Wang, A.H.-J.' 5
#
_citation.id primary
_citation.title
'Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.'
_citation.journal_abbrev 'Nucleic Acids Res.'
_citation.journal_volume 28
_citation.page_first 1760
_citation.page_last 1766
_citation.year 2000
_citation.journal_id_ASTM NARHAD
_citation.country UK
_citation.journal_id_ISSN 0305-1048
_citation.journal_id_CSD 0389
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 10734195
_citation.pdbx_database_id_DOI 10.1093/nar/28.8.1760
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Robinson, H.' 1 ?
primary 'Gao, Y.G.' 2 ?
primary 'Sanishvili, R.' 3 ?
primary 'Joachimiak, A.' 4 ?
primary 'Wang, A.H.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')
;
3045.992 1 ? ? ? ?
2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ?
3 water nat water 18.015 36 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DA)(DC)(DC)(DG)(DG)(DC)(DC)(DG)(DG)(DT)'
_entity_poly.pdbx_seq_one_letter_code_can ACCGGCCGGT
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'MAGNESIUM ION' MG
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DA n
1 2 DC n
1 3 DC n
1 4 DG n
1 5 DG n
1 6 DC n
1 7 DC n
1 8 DG n
1 9 DG n
1 10 DT n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DA 1 1 1 DA A A . n
A 1 2 DC 2 2 2 DC C A . n
A 1 3 DC 3 3 3 DC C A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DG 5 5 5 DG G A . n
A 1 6 DC 6 6 6 DC C A . n
A 1 7 DC 7 7 7 DC C A . n
A 1 8 DG 8 8 8 DG G A . n
A 1 9 DG 9 9 9 DG G A . n
A 1 10 DT 10 10 10 DT T A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG 1 21 21 MG MO6 A .
C 2 MG 1 22 22 MG MO6 A .
D 3 HOH 1 101 101 HOH HOH A .
D 3 HOH 2 102 102 HOH HOH A .
D 3 HOH 3 103 103 HOH HOH A .
D 3 HOH 4 104 104 HOH HOH A .
D 3 HOH 5 105 105 HOH HOH A .
D 3 HOH 6 106 106 HOH HOH A .
D 3 HOH 7 107 107 HOH HOH A .
D 3 HOH 8 108 108 HOH HOH A .
D 3 HOH 9 109 109 HOH HOH A .
D 3 HOH 10 110 110 HOH HOH A .
D 3 HOH 11 111 111 HOH HOH A .
D 3 HOH 12 112 112 HOH HOH A .
D 3 HOH 13 113 113 HOH HOH A .
D 3 HOH 14 114 114 HOH HOH A .
D 3 HOH 15 115 115 HOH HOH A .
D 3 HOH 16 116 116 HOH HOH A .
D 3 HOH 17 117 117 HOH HOH A .
D 3 HOH 18 118 118 HOH HOH A .
D 3 HOH 19 119 119 HOH HOH A .
D 3 HOH 20 120 120 HOH HOH A .
D 3 HOH 21 121 121 HOH HOH A .
D 3 HOH 22 122 122 HOH HOH A .
D 3 HOH 23 123 123 HOH HOH A .
D 3 HOH 24 124 124 HOH HOH A .
D 3 HOH 25 125 21 HOH MO6 A .
D 3 HOH 26 126 21 HOH MO6 A .
D 3 HOH 27 127 21 HOH MO6 A .
D 3 HOH 28 128 21 HOH MO6 A .
D 3 HOH 29 129 21 HOH MO6 A .
D 3 HOH 30 130 21 HOH MO6 A .
D 3 HOH 31 131 22 HOH MO6 A .
D 3 HOH 32 132 22 HOH MO6 A .
D 3 HOH 33 133 22 HOH MO6 A .
D 3 HOH 34 134 22 HOH MO6 A .
D 3 HOH 35 135 22 HOH MO6 A .
D 3 HOH 36 136 22 HOH MO6 A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
X-PLOR 'model building' . ? 1
SHELXL-97 refinement . ? 2
d*TREK 'data scaling' . ? 3
X-PLOR phasing . ? 4
#
_cell.entry_id 1DNZ
_cell.length_a 38.502
_cell.length_b 38.502
_cell.length_c 77.631
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1DNZ
_symmetry.space_group_name_H-M 'P 61 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting hexagonal
_symmetry.Int_Tables_number 178
#
_exptl.entry_id 1DNZ
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.44
_exptl_crystal.density_percent_sol 50.0
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pdbx_details 'MPD, CACODYLATE, MGCL2, SPERMINE, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 CACODYLATE ? ? ?
1 2 1 SPERMINE ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 MPD ? ? ?
1 5 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 123
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date 1999-05-05
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1DNZ
_reflns.observed_criterion_sigma_I 0.0
_reflns.observed_criterion_sigma_F 0.0
_reflns.d_resolution_low 20.0
_reflns.d_resolution_high 1.6
_reflns.number_obs 4901
_reflns.number_all 4901
_reflns.percent_possible_obs 99.6
_reflns.pdbx_Rmerge_I_obs 0.0420000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 47.8
_reflns.B_iso_Wilson_estimate 29.2
_reflns.pdbx_redundancy 15.2
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.60
_reflns_shell.d_res_low 1.65
_reflns_shell.percent_possible_all 96.8
_reflns_shell.Rmerge_I_obs 0.4890000
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 9.2
_reflns_shell.pdbx_redundancy 8.4
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1DNZ
_refine.ls_number_reflns_obs 4874
_refine.ls_number_reflns_all 4874
_refine.pdbx_ls_sigma_I 0.0
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 20.0
_refine.ls_d_res_high 1.6
_refine.ls_percent_reflns_obs 99.6
_refine.ls_R_factor_obs 0.2270000
_refine.ls_R_factor_all 0.2290000
_refine.ls_R_factor_R_work 0.2270000
_refine.ls_R_factor_R_free 0.2790000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5
_refine.ls_number_reflns_R_free 245
_refine.ls_number_parameters 963
_refine.ls_number_restraints 907
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details 'SHELXL SWAT OPTION'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method 'A POSTERIORI'
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'G.PARKINSON ET AL.'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 1DNZ
_refine_analyze.Luzzati_coordinate_error_obs ?
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues 0
_refine_analyze.occupancy_sum_hydrogen 0
_refine_analyze.occupancy_sum_non_hydrogen 235.5
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 202
_refine_hist.pdbx_number_atoms_ligand 14
_refine_hist.number_atoms_solvent 24
_refine_hist.number_atoms_total 240
_refine_hist.d_res_high 1.6
_refine_hist.d_res_low 20.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
s_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ?
s_angle_d 0.025 ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ?
s_from_restr_planes 0.071 ? ? ? 'X-RAY DIFFRACTION' ?
s_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ?
s_non_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ?
s_anti_bump_dis_restr 0.003 ? ? ? 'X-RAY DIFFRACTION' ?
s_rigid_bond_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_adp_cmpnt 0.060 ? ? ? 'X-RAY DIFFRACTION' ?
s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_pdbx_refine.entry_id 1DNZ
_pdbx_refine.R_factor_all_no_cutoff ?
_pdbx_refine.R_factor_obs_no_cutoff ?
_pdbx_refine.free_R_factor_no_cutoff ?
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ?
_pdbx_refine.free_R_val_test_set_ct_no_cutoff ?
_pdbx_refine.R_factor_all_4sig_cutoff 0.2290000
_pdbx_refine.R_factor_obs_4sig_cutoff 0.2270000
_pdbx_refine.free_R_factor_4sig_cutoff 0.2780000
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 242
_pdbx_refine.number_reflns_obs_4sig_cutoff 4656
_pdbx_refine.number_reflns_obs_no_cutoff ?
_pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine.free_R_error_no_cutoff ?
#
_database_PDB_matrix.entry_id 1DNZ
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1DNZ
_struct.title 'A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITES'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1DNZ
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA CONFORMATION, METAL IONS, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1DNZ
_struct_ref.pdbx_db_accession 1DNZ
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1DNZ
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 10
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 1DNZ
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 10
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 38.8155000000
#
_struct_biol.id 1
_struct_biol.pdbx_parent_biol_id ?
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 21 A HOH 125 1_555 ? ? ? ? ? ? ? 2.064 ? ?
metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 21 A HOH 126 1_555 ? ? ? ? ? ? ? 2.070 ? ?
metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 21 A HOH 127 1_555 ? ? ? ? ? ? ? 2.070 ? ?
metalc4 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 21 A HOH 128 1_555 ? ? ? ? ? ? ? 2.061 ? ?
metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 21 A HOH 129 1_555 ? ? ? ? ? ? ? 2.058 ? ?
metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 21 A HOH 130 1_555 ? ? ? ? ? ? ? 2.050 ? ?
metalc7 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 101 1_555 ? ? ? ? ? ? ? 2.399 ? ?
metalc8 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 102 11_555 ? ? ? ? ? ? ? 2.477 ? ?
metalc9 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 131 1_555 ? ? ? ? ? ? ? 2.055 ? ?
metalc10 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 132 1_555 ? ? ? ? ? ? ? 2.059 ? ?
metalc11 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 132 11_555 ? ? ? ? ? ? ? 1.548 ? ?
metalc12 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 133 1_555 ? ? ? ? ? ? ? 2.062 ? ?
metalc13 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 133 11_555 ? ? ? ? ? ? ? 1.516 ? ?
metalc14 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 134 1_555 ? ? ? ? ? ? ? 2.052 ? ?
metalc15 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 134 11_555 ? ? ? ? ? ? ? 2.871 ? ?
metalc16 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 135 1_555 ? ? ? ? ? ? ? 2.060 ? ?
metalc17 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 136 1_555 ? ? ? ? ? ? ? 2.067 ? ?
metalc18 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 22 A HOH 136 11_555 ? ? ? ? ? ? ? 2.736 ? ?
hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 A DT 10 N3 ? ? A DA 1 A DT 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 A DT 10 O4 ? ? A DA 1 A DT 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 8 N1 ? ? A DC 3 A DG 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 8 O6 ? ? A DC 3 A DG 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 8 N2 ? ? A DC 3 A DG 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 8 A DC 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 8 A DC 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 8 A DC 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog27 hydrog ? ? A DT 10 N3 ? ? ? 1_555 A DA 1 N1 ? ? A DT 10 A DA 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog28 hydrog ? ? A DT 10 O4 ? ? ? 1_555 A DA 1 N6 ? ? A DT 10 A DA 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? D HOH . ? A HOH 125 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 126 ? 1_555 178.4 ?
2 O ? D HOH . ? A HOH 125 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 127 ? 1_555 90.5 ?
3 O ? D HOH . ? A HOH 126 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 127 ? 1_555 88.3 ?
4 O ? D HOH . ? A HOH 125 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 128 ? 1_555 90.3 ?
5 O ? D HOH . ? A HOH 126 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 128 ? 1_555 90.7 ?
6 O ? D HOH . ? A HOH 127 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 128 ? 1_555 87.6 ?
7 O ? D HOH . ? A HOH 125 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 129 ? 1_555 91.1 ?
8 O ? D HOH . ? A HOH 126 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 129 ? 1_555 90.2 ?
9 O ? D HOH . ? A HOH 127 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 129 ? 1_555 177.1 ?
10 O ? D HOH . ? A HOH 128 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 129 ? 1_555 90.0 ?
11 O ? D HOH . ? A HOH 125 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 130 ? 1_555 88.8 ?
12 O ? D HOH . ? A HOH 126 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 130 ? 1_555 90.2 ?
13 O ? D HOH . ? A HOH 127 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 130 ? 1_555 91.7 ?
14 O ? D HOH . ? A HOH 128 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 130 ? 1_555 178.9 ?
15 O ? D HOH . ? A HOH 129 ? 1_555 MG ? B MG . ? A MG 21 ? 1_555 O ? D HOH . ? A HOH 130 ? 1_555 90.7 ?
16 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 102 ? 11_555 75.6 ?
17 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 131 ? 1_555 73.2 ?
18 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 131 ? 1_555 12.3 ?
19 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 1_555 106.0 ?
20 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 1_555 167.3 ?
21 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 1_555 179.2 ?
22 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 11_555 89.1 ?
23 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 11_555 78.0 ?
24 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 11_555 90.1 ?
25 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 132 ? 11_555 89.5 ?
26 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 1_555 152.4 ?
27 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 1_555 83.7 ?
28 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 1_555 90.2 ?
29 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 1_555 90.3 ?
30 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 1_555 68.5 ?
31 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 11_555 122.8 ?
32 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 11_555 121.0 ?
33 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 11_555 111.7 ?
34 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 11_555 69.1 ?
35 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 11_555 144.8 ?
36 O ? D HOH . ? A HOH 133 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 133 ? 11_555 83.6 ?
37 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 111.1 ?
38 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 101.1 ?
39 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 90.6 ?
40 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 90.1 ?
41 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 159.1 ?
42 O ? D HOH . ? A HOH 133 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 90.6 ?
43 O ? D HOH . ? A HOH 133 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 1_555 22.3 ?
44 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 157.8 ?
45 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 85.2 ?
46 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 90.3 ?
47 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 90.3 ?
48 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 75.8 ?
49 O ? D HOH . ? A HOH 133 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 7.3 ?
50 O ? D HOH . ? A HOH 133 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 76.8 ?
51 O ? D HOH . ? A HOH 134 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 134 ? 11_555 83.3 ?
52 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 26.9 ?
53 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 96.2 ?
54 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 89.9 ?
55 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 89.6 ?
56 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 110.5 ?
57 O ? D HOH . ? A HOH 133 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 179.0 ?
58 O ? D HOH . ? A HOH 133 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 97.3 ?
59 O ? D HOH . ? A HOH 134 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 90.4 ?
60 O ? D HOH . ? A HOH 134 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 135 ? 1_555 173.7 ?
61 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 69.2 ?
62 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 79.3 ?
63 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 89.8 ?
64 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 89.5 ?
65 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 20.7 ?
66 O ? D HOH . ? A HOH 133 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 89.2 ?
67 O ? D HOH . ? A HOH 133 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 157.2 ?
68 O ? D HOH . ? A HOH 134 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 179.5 ?
69 O ? D HOH . ? A HOH 134 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 96.5 ?
70 O ? D HOH . ? A HOH 135 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 1_555 89.8 ?
71 O ? D HOH . ? A HOH 101 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 98.9 ?
72 O ? D HOH . ? A HOH 102 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 157.5 ?
73 O ? D HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 167.7 ?
74 O ? D HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 11.5 ?
75 O ? D HOH . ? A HOH 132 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 80.2 ?
76 O ? D HOH . ? A HOH 133 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 93.1 ?
77 O ? D HOH . ? A HOH 133 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 80.5 ?
78 O ? D HOH . ? A HOH 134 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 101.2 ?
79 O ? D HOH . ? A HOH 134 ? 11_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 94.5 ?
80 O ? D HOH . ? A HOH 135 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 86.6 ?
81 O ? D HOH . ? A HOH 136 ? 1_555 MG ? C MG . ? A MG 22 ? 1_555 O ? D HOH . ? A HOH 136 ? 11_555 78.4 ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A MG 21 ? 6 'BINDING SITE FOR RESIDUE MG A 21'
AC2 Software A MG 22 ? 12 'BINDING SITE FOR RESIDUE MG A 22'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 6 HOH D . ? HOH A 125 . ? 1_555 ?
2 AC1 6 HOH D . ? HOH A 126 . ? 1_555 ?
3 AC1 6 HOH D . ? HOH A 127 . ? 1_555 ?
4 AC1 6 HOH D . ? HOH A 128 . ? 1_555 ?
5 AC1 6 HOH D . ? HOH A 129 . ? 1_555 ?
6 AC1 6 HOH D . ? HOH A 130 . ? 1_555 ?
7 AC2 12 HOH D . ? HOH A 101 . ? 1_555 ?
8 AC2 12 HOH D . ? HOH A 102 . ? 11_555 ?
9 AC2 12 HOH D . ? HOH A 131 . ? 1_555 ?
10 AC2 12 HOH D . ? HOH A 132 . ? 11_555 ?
11 AC2 12 HOH D . ? HOH A 132 . ? 1_555 ?
12 AC2 12 HOH D . ? HOH A 133 . ? 1_555 ?
13 AC2 12 HOH D . ? HOH A 133 . ? 11_555 ?
14 AC2 12 HOH D . ? HOH A 134 . ? 11_555 ?
15 AC2 12 HOH D . ? HOH A 134 . ? 1_555 ?
16 AC2 12 HOH D . ? HOH A 135 . ? 1_555 ?
17 AC2 12 HOH D . ? HOH A 136 . ? 11_555 ?
18 AC2 12 HOH D . ? HOH A 136 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? N9 A DA 1 ? ? 103.37 108.00 -4.63 0.70 N
2 1 "O4'" A DC 3 ? ? "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? 102.04 104.50 -2.46 0.40 N
3 1 "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? "C2'" A DC 3 ? ? 97.56 102.20 -4.64 0.70 N
4 1 N3 A DC 3 ? ? C4 A DC 3 ? ? C5 A DC 3 ? ? 119.34 121.90 -2.56 0.40 N
5 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.76 102.20 -4.44 0.70 N
6 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.05 108.30 2.75 0.30 N
7 1 C6 A DC 6 ? ? N1 A DC 6 ? ? C2 A DC 6 ? ? 122.95 120.30 2.65 0.40 N
8 1 N3 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 112.93 118.00 -5.07 0.70 N
9 1 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 101.61 104.50 -2.89 0.40 N
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 1 DG A 4 ? ? 0.080 'SIDE CHAIN'
2 1 DG A 8 ? ? 0.051 'SIDE CHAIN'
3 1 DG A 9 ? ? 0.060 'SIDE CHAIN'
4 1 DT A 10 ? ? 0.059 'SIDE CHAIN'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DT OP3 O N N 108
DT P P N N 109
DT OP1 O N N 110
DT OP2 O N N 111
DT "O5'" O N N 112
DT "C5'" C N N 113
DT "C4'" C N R 114
DT "O4'" O N N 115
DT "C3'" C N S 116
DT "O3'" O N N 117
DT "C2'" C N N 118
DT "C1'" C N R 119
DT N1 N N N 120
DT C2 C N N 121
DT O2 O N N 122
DT N3 N N N 123
DT C4 C N N 124
DT O4 O N N 125
DT C5 C N N 126
DT C7 C N N 127
DT C6 C N N 128
DT HOP3 H N N 129
DT HOP2 H N N 130
DT "H5'" H N N 131
DT "H5''" H N N 132
DT "H4'" H N N 133
DT "H3'" H N N 134
DT "HO3'" H N N 135
DT "H2'" H N N 136
DT "H2''" H N N 137
DT "H1'" H N N 138
DT H3 H N N 139
DT H71 H N N 140
DT H72 H N N 141
DT H73 H N N 142
DT H6 H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
MG MG MG N N 147
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DT OP3 P sing N N 113
DT OP3 HOP3 sing N N 114
DT P OP1 doub N N 115
DT P OP2 sing N N 116
DT P "O5'" sing N N 117
DT OP2 HOP2 sing N N 118
DT "O5'" "C5'" sing N N 119
DT "C5'" "C4'" sing N N 120
DT "C5'" "H5'" sing N N 121
DT "C5'" "H5''" sing N N 122
DT "C4'" "O4'" sing N N 123
DT "C4'" "C3'" sing N N 124
DT "C4'" "H4'" sing N N 125
DT "O4'" "C1'" sing N N 126
DT "C3'" "O3'" sing N N 127
DT "C3'" "C2'" sing N N 128
DT "C3'" "H3'" sing N N 129
DT "O3'" "HO3'" sing N N 130
DT "C2'" "C1'" sing N N 131
DT "C2'" "H2'" sing N N 132
DT "C2'" "H2''" sing N N 133
DT "C1'" N1 sing N N 134
DT "C1'" "H1'" sing N N 135
DT N1 C2 sing N N 136
DT N1 C6 sing N N 137
DT C2 O2 doub N N 138
DT C2 N3 sing N N 139
DT N3 C4 sing N N 140
DT N3 H3 sing N N 141
DT C4 O4 doub N N 142
DT C4 C5 sing N N 143
DT C5 C7 sing N N 144
DT C5 C6 doub N N 145
DT C7 H71 sing N N 146
DT C7 H72 sing N N 147
DT C7 H73 sing N N 148
DT C6 H6 sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
#
_ndb_struct_conf_na.entry_id 1DNZ
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DA 1 1_555 A DT 10 11_555 -0.732 -0.613 -0.026 -5.470 -14.267 -7.138 1 A_DA1:DT10_A A 1 ? A 10 ? 20 1
1 A DC 2 1_555 A DG 9 11_555 0.211 -0.141 0.145 7.488 -12.995 2.159 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1
1 A DC 3 1_555 A DG 8 11_555 0.143 -0.083 -0.038 7.265 -12.771 0.221 3 A_DC3:DG8_A A 3 ? A 8 ? 19 1
1 A DG 4 1_555 A DC 7 11_555 -0.214 -0.118 0.380 11.275 -9.851 2.010 4 A_DG4:DC7_A A 4 ? A 7 ? 19 1
1 A DG 5 1_555 A DC 6 11_555 -0.340 -0.096 0.154 2.426 -19.532 0.338 5 A_DG5:DC6_A A 5 ? A 6 ? 19 1
1 A DC 6 1_555 A DG 5 11_555 0.340 -0.096 0.154 -2.426 -19.532 0.338 6 A_DC6:DG5_A A 6 ? A 5 ? 19 1
1 A DC 7 1_555 A DG 4 11_555 0.214 -0.118 0.380 -11.275 -9.851 2.010 7 A_DC7:DG4_A A 7 ? A 4 ? 19 1
1 A DG 8 1_555 A DC 3 11_555 -0.143 -0.083 -0.038 -7.265 -12.771 0.221 8 A_DG8:DC3_A A 8 ? A 3 ? 19 1
1 A DG 9 1_555 A DC 2 11_555 -0.211 -0.141 0.145 -7.488 -12.995 2.159 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1
1 A DT 10 1_555 A DA 1 11_555 0.732 -0.613 -0.026 5.470 -14.267 -7.138 10 A_DT10:DA1_A A 10 ? A 1 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DA 1 1_555 A DT 10 11_555 A DC 2 1_555 A DG 9 11_555 0.874 -1.211 2.902 -2.057 7.898 37.239 -2.700 -1.559 2.551 12.188
3.174 38.092 1 AA_DA1DC2:DG9DT10_AA A 1 ? A 10 ? A 2 ? A 9 ?
1 A DC 2 1_555 A DG 9 11_555 A DC 3 1_555 A DG 8 11_555 -0.200 -1.406 3.268 -0.478 5.589 34.374 -3.172 0.265 3.012 9.380
0.802 34.815 2 AA_DC2DC3:DG8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DC 3 1_555 A DG 8 11_555 A DG 4 1_555 A DC 7 11_555 -0.278 -1.719 3.097 -5.181 11.244 24.896 -5.879 -0.479 2.149 24.260
11.179 27.761 3 AA_DC3DG4:DC7DG8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DG 4 1_555 A DC 7 11_555 A DG 5 1_555 A DC 6 11_555 -0.568 -1.379 3.289 -2.333 8.034 34.794 -3.365 0.600 2.939 13.201
3.834 35.755 4 AA_DG4DG5:DC6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ?
1 A DG 5 1_555 A DC 6 11_555 A DC 6 1_555 A DG 5 11_555 0.000 -1.262 3.328 0.000 4.777 35.883 -2.699 0.000 3.140 7.711
0.000 36.189 5 AA_DG5DC6:DG5DC6_AA A 5 ? A 6 ? A 6 ? A 5 ?
1 A DC 6 1_555 A DG 5 11_555 A DC 7 1_555 A DG 4 11_555 0.568 -1.379 3.289 2.333 8.034 34.794 -3.365 -0.600 2.939 13.201
-3.834 35.755 6 AA_DC6DC7:DG4DG5_AA A 6 ? A 5 ? A 7 ? A 4 ?
1 A DC 7 1_555 A DG 4 11_555 A DG 8 1_555 A DC 3 11_555 0.278 -1.719 3.097 5.181 11.244 24.896 -5.879 0.479 2.149 24.260
-11.179 27.761 7 AA_DC7DG8:DC3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ?
1 A DG 8 1_555 A DC 3 11_555 A DG 9 1_555 A DC 2 11_555 0.200 -1.406 3.268 0.478 5.589 34.374 -3.172 -0.265 3.012 9.380
-0.802 34.815 8 AA_DG8DG9:DC2DC3_AA A 8 ? A 3 ? A 9 ? A 2 ?
1 A DG 9 1_555 A DC 2 11_555 A DT 10 1_555 A DA 1 11_555 -0.874 -1.211 2.902 2.057 7.898 37.239 -2.700 1.559 2.551 12.188
-3.174 38.092 9 AA_DG9DT10:DA1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ?
#
_atom_sites.entry_id 1DNZ
_atom_sites.fract_transf_matrix[1][1] 0.025973
_atom_sites.fract_transf_matrix[1][2] 0.014995
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.029991
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.012881
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
MG
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DA A 1 1 ? -9.742 21.098 15.940 1.00 35.01 ? 1 DA A "O5'" 1
ATOM 2 C "C5'" . DA A 1 1 ? -9.688 19.702 16.275 1.00 36.66 ? 1 DA A "C5'" 1
ATOM 3 C "C4'" . DA A 1 1 ? -9.004 18.883 15.208 1.00 23.72 ? 1 DA A "C4'" 1
ATOM 4 O "O4'" . DA A 1 1 ? -9.539 19.169 13.897 1.00 22.84 ? 1 DA A "O4'" 1
ATOM 5 C "C3'" . DA A 1 1 ? -7.510 19.158 15.075 1.00 21.34 ? 1 DA A "C3'" 1
ATOM 6 O "O3'" . DA A 1 1 ? -6.746 18.479 16.058 1.00 28.12 ? 1 DA A "O3'" 1
ATOM 7 C "C2'" . DA A 1 1 ? -7.244 18.638 13.656 1.00 16.55 ? 1 DA A "C2'" 1
ATOM 8 C "C1'" . DA A 1 1 ? -8.485 19.163 12.934 1.00 23.49 ? 1 DA A "C1'" 1
ATOM 9 N N9 . DA A 1 1 ? -8.315 20.590 12.606 1.00 27.22 ? 1 DA A N9 1
ATOM 10 C C8 . DA A 1 1 ? -8.936 21.648 13.229 1.00 26.21 ? 1 DA A C8 1
ATOM 11 N N7 . DA A 1 1 ? -8.657 22.785 12.643 1.00 30.30 ? 1 DA A N7 1
ATOM 12 C C5 . DA A 1 1 ? -8.007 22.418 11.479 1.00 24.24 ? 1 DA A C5 1
ATOM 13 C C6 . DA A 1 1 ? -7.350 23.176 10.493 1.00 25.06 ? 1 DA A C6 1
ATOM 14 N N6 . DA A 1 1 ? -7.432 24.509 10.444 1.00 46.52 ? 1 DA A N6 1
ATOM 15 N N1 . DA A 1 1 ? -6.623 22.513 9.579 1.00 24.89 ? 1 DA A N1 1
ATOM 16 C C2 . DA A 1 1 ? -6.498 21.183 9.650 1.00 29.06 ? 1 DA A C2 1
ATOM 17 N N3 . DA A 1 1 ? -7.007 20.372 10.575 1.00 24.69 ? 1 DA A N3 1
ATOM 18 C C4 . DA A 1 1 ? -7.689 21.068 11.497 1.00 20.49 ? 1 DA A C4 1
ATOM 19 P P . DC A 1 2 ? -5.518 19.166 16.829 1.00 25.25 ? 2 DC A P 1
ATOM 20 O OP1 . DC A 1 2 ? -4.893 18.154 17.712 1.00 26.96 ? 2 DC A OP1 1
ATOM 21 O OP2 . DC A 1 2 ? -5.888 20.501 17.332 1.00 30.08 ? 2 DC A OP2 1
ATOM 22 O "O5'" . DC A 1 2 ? -4.423 19.425 15.681 1.00 25.29 ? 2 DC A "O5'" 1
ATOM 23 C "C5'" . DC A 1 2 ? -3.801 18.301 15.052 1.00 21.62 ? 2 DC A "C5'" 1
ATOM 24 C "C4'" . DC A 1 2 ? -3.105 18.676 13.777 1.00 21.66 ? 2 DC A "C4'" 1
ATOM 25 O "O4'" . DC A 1 2 ? -4.011 19.253 12.817 1.00 21.02 ? 2 DC A "O4'" 1
ATOM 26 C "C3'" . DC A 1 2 ? -2.030 19.759 13.980 1.00 19.42 ? 2 DC A "C3'" 1
ATOM 27 O "O3'" . DC A 1 2 ? -0.787 19.126 14.290 1.00 23.67 ? 2 DC A "O3'" 1
ATOM 28 C "C2'" . DC A 1 2 ? -1.963 20.374 12.600 1.00 16.65 ? 2 DC A "C2'" 1
ATOM 29 C "C1'" . DC A 1 2 ? -3.407 20.345 12.152 1.00 20.90 ? 2 DC A "C1'" 1
ATOM 30 N N1 . DC A 1 2 ? -4.112 21.575 12.546 1.00 22.86 ? 2 DC A N1 1
ATOM 31 C C2 . DC A 1 2 ? -3.965 22.642 11.661 1.00 16.52 ? 2 DC A C2 1
ATOM 32 O O2 . DC A 1 2 ? -3.235 22.459 10.683 1.00 20.48 ? 2 DC A O2 1
ATOM 33 N N3 . DC A 1 2 ? -4.624 23.782 11.907 1.00 19.45 ? 2 DC A N3 1
ATOM 34 C C4 . DC A 1 2 ? -5.362 23.891 13.019 1.00 23.92 ? 2 DC A C4 1
ATOM 35 N N4 . DC A 1 2 ? -6.019 25.049 13.186 1.00 21.61 ? 2 DC A N4 1
ATOM 36 C C5 . DC A 1 2 ? -5.551 22.819 13.936 1.00 19.65 ? 2 DC A C5 1
ATOM 37 C C6 . DC A 1 2 ? -4.860 21.690 13.681 1.00 23.88 ? 2 DC A C6 1
ATOM 38 P P . DC A 1 3 ? 0.365 19.894 15.110 1.00 28.66 ? 3 DC A P 1
ATOM 39 O OP1 . DC A 1 3 ? 1.464 18.943 15.335 1.00 30.88 ? 3 DC A OP1 1
ATOM 40 O OP2 . DC A 1 3 ? -0.195 20.749 16.168 1.00 25.63 ? 3 DC A OP2 1
ATOM 41 O "O5'" . DC A 1 3 ? 0.926 20.920 14.012 1.00 22.60 ? 3 DC A "O5'" 1
ATOM 42 C "C5'" . DC A 1 3 ? 1.802 20.497 12.972 1.00 22.94 ? 3 DC A "C5'" 1
ATOM 43 C "C4'" . DC A 1 3 ? 1.953 21.622 11.994 1.00 20.21 ? 3 DC A "C4'" 1
ATOM 44 O "O4'" . DC A 1 3 ? 0.702 22.112 11.449 1.00 26.10 ? 3 DC A "O4'" 1
ATOM 45 C "C3'" . DC A 1 3 ? 2.523 22.889 12.686 1.00 27.34 ? 3 DC A "C3'" 1
ATOM 46 O "O3'" . DC A 1 3 ? 3.907 22.689 12.970 1.00 40.87 ? 3 DC A "O3'" 1
ATOM 47 C "C2'" . DC A 1 3 ? 2.295 23.861 11.542 1.00 16.69 ? 3 DC A "C2'" 1
ATOM 48 C "C1'" . DC A 1 3 ? 0.828 23.525 11.216 1.00 22.87 ? 3 DC A "C1'" 1
ATOM 49 N N1 . DC A 1 3 ? -0.148 24.215 12.091 1.00 19.03 ? 3 DC A N1 1
ATOM 50 C C2 . DC A 1 3 ? -0.583 25.490 11.746 1.00 21.25 ? 3 DC A C2 1
ATOM 51 O O2 . DC A 1 3 ? -0.070 26.043 10.773 1.00 21.35 ? 3 DC A O2 1
ATOM 52 N N3 . DC A 1 3 ? -1.554 26.097 12.462 1.00 13.69 ? 3 DC A N3 1
ATOM 53 C C4 . DC A 1 3 ? -2.156 25.468 13.481 1.00 18.03 ? 3 DC A C4 1
ATOM 54 N N4 . DC A 1 3 ? -3.037 26.164 14.228 1.00 19.86 ? 3 DC A N4 1
ATOM 55 C C5 . DC A 1 3 ? -1.639 24.214 13.934 1.00 21.35 ? 3 DC A C5 1
ATOM 56 C C6 . DC A 1 3 ? -0.742 23.594 13.145 1.00 15.80 ? 3 DC A C6 1
ATOM 57 P P . DG A 1 4 ? 4.590 23.353 14.269 1.00 31.61 ? 4 DG A P 1
ATOM 58 O OP1 . DG A 1 4 ? 5.935 22.733 14.388 1.00 38.68 ? 4 DG A OP1 1
ATOM 59 O OP2 . DG A 1 4 ? 3.645 23.396 15.418 1.00 26.56 ? 4 DG A OP2 1
ATOM 60 O "O5'" . DG A 1 4 ? 4.844 24.871 13.839 1.00 26.12 ? 4 DG A "O5'" 1
ATOM 61 C "C5'" . DG A 1 4 ? 5.405 25.220 12.568 1.00 28.32 ? 4 DG A "C5'" 1
ATOM 62 C "C4'" . DG A 1 4 ? 5.181 26.668 12.250 1.00 26.25 ? 4 DG A "C4'" 1
ATOM 63 O "O4'" . DG A 1 4 ? 3.835 26.893 11.744 1.00 23.63 ? 4 DG A "O4'" 1
ATOM 64 C "C3'" . DG A 1 4 ? 5.311 27.650 13.423 1.00 25.89 ? 4 DG A "C3'" 1
ATOM 65 O "O3'" . DG A 1 4 ? 6.693 28.003 13.550 1.00 42.68 ? 4 DG A "O3'" 1
ATOM 66 C "C2'" . DG A 1 4 ? 4.636 28.861 12.756 1.00 25.21 ? 4 DG A "C2'" 1
ATOM 67 C "C1'" . DG A 1 4 ? 3.392 28.175 12.187 1.00 26.91 ? 4 DG A "C1'" 1
ATOM 68 N N9 . DG A 1 4 ? 2.341 28.048 13.194 1.00 20.81 ? 4 DG A N9 1
ATOM 69 C C8 . DG A 1 4 ? 1.937 26.991 13.968 1.00 25.90 ? 4 DG A C8 1
ATOM 70 N N7 . DG A 1 4 ? 0.838 27.225 14.653 1.00 23.31 ? 4 DG A N7 1
ATOM 71 C C5 . DG A 1 4 ? 0.518 28.538 14.323 1.00 14.42 ? 4 DG A C5 1
ATOM 72 C C6 . DG A 1 4 ? -0.553 29.382 14.727 1.00 21.97 ? 4 DG A C6 1
ATOM 73 O O6 . DG A 1 4 ? -1.572 29.038 15.341 1.00 17.97 ? 4 DG A O6 1
ATOM 74 N N1 . DG A 1 4 ? -0.468 30.663 14.173 1.00 18.82 ? 4 DG A N1 1
ATOM 75 C C2 . DG A 1 4 ? 0.535 31.110 13.351 1.00 18.30 ? 4 DG A C2 1
ATOM 76 N N2 . DG A 1 4 ? 0.487 32.385 12.919 1.00 18.65 ? 4 DG A N2 1
ATOM 77 N N3 . DG A 1 4 ? 1.535 30.320 12.949 1.00 19.29 ? 4 DG A N3 1
ATOM 78 C C4 . DG A 1 4 ? 1.424 29.057 13.426 1.00 18.11 ? 4 DG A C4 1
ATOM 79 P P . DG A 1 5 ? 7.355 28.609 14.859 1.00 34.07 ? 5 DG A P 1
ATOM 80 O OP1 . DG A 1 5 ? 8.834 28.550 14.643 1.00 35.81 ? 5 DG A OP1 1
ATOM 81 O OP2 . DG A 1 5 ? 6.756 28.045 16.088 1.00 28.81 ? 5 DG A OP2 1
ATOM 82 O "O5'" . DG A 1 5 ? 7.009 30.168 14.874 1.00 33.87 ? 5 DG A "O5'" 1
ATOM 83 C "C5'" . DG A 1 5 ? 7.382 30.984 13.759 1.00 21.58 ? 5 DG A "C5'" 1
ATOM 84 C "C4'" . DG A 1 5 ? 6.677 32.313 13.857 1.00 24.28 ? 5 DG A "C4'" 1
ATOM 85 O "O4'" . DG A 1 5 ? 5.292 32.197 13.452 1.00 26.08 ? 5 DG A "O4'" 1
ATOM 86 C "C3'" . DG A 1 5 ? 6.620 32.938 15.264 1.00 23.19 ? 5 DG A "C3'" 1
ATOM 87 O "O3'" . DG A 1 5 ? 7.796 33.736 15.468 1.00 23.02 ? 5 DG A "O3'" 1
ATOM 88 C "C2'" . DG A 1 5 ? 5.456 33.903 15.066 1.00 21.17 ? 5 DG A "C2'" 1
ATOM 89 C "C1'" . DG A 1 5 ? 4.485 33.032 14.279 1.00 22.76 ? 5 DG A "C1'" 1
ATOM 90 N N9 . DG A 1 5 ? 3.639 32.208 15.106 1.00 18.38 ? 5 DG A N9 1
ATOM 91 C C8 . DG A 1 5 ? 3.794 30.871 15.397 1.00 16.38 ? 5 DG A C8 1
ATOM 92 N N7 . DG A 1 5 ? 2.884 30.399 16.191 1.00 19.99 ? 5 DG A N7 1
ATOM 93 C C5 . DG A 1 5 ? 2.002 31.454 16.352 1.00 19.53 ? 5 DG A C5 1
ATOM 94 C C6 . DG A 1 5 ? 0.822 31.515 17.127 1.00 20.14 ? 5 DG A C6 1
ATOM 95 O O6 . DG A 1 5 ? 0.288 30.616 17.792 1.00 22.20 ? 5 DG A O6 1
ATOM 96 N N1 . DG A 1 5 ? 0.371 32.835 17.191 1.00 20.68 ? 5 DG A N1 1
ATOM 97 C C2 . DG A 1 5 ? 0.928 33.913 16.561 1.00 22.29 ? 5 DG A C2 1
ATOM 98 N N2 . DG A 1 5 ? 0.303 35.095 16.703 1.00 25.50 ? 5 DG A N2 1
ATOM 99 N N3 . DG A 1 5 ? 2.009 33.850 15.792 1.00 22.05 ? 5 DG A N3 1
ATOM 100 C C4 . DG A 1 5 ? 2.500 32.591 15.780 1.00 19.98 ? 5 DG A C4 1
ATOM 101 P P . DC A 1 6 ? 8.460 33.869 16.891 1.00 26.16 ? 6 DC A P 1
ATOM 102 O OP1 . DC A 1 6 ? 9.779 34.550 16.731 1.00 31.76 ? 6 DC A OP1 1
ATOM 103 O OP2 . DC A 1 6 ? 8.407 32.587 17.676 1.00 25.86 ? 6 DC A OP2 1
ATOM 104 O "O5'" . DC A 1 6 ? 7.548 34.845 17.755 1.00 26.31 ? 6 DC A "O5'" 1
ATOM 105 C "C5'" . DC A 1 6 ? 7.246 36.178 17.331 1.00 24.10 ? 6 DC A "C5'" 1
ATOM 106 C "C4'" . DC A 1 6 ? 6.019 36.715 17.998 1.00 18.22 ? 6 DC A "C4'" 1
ATOM 107 O "O4'" . DC A 1 6 ? 4.825 36.031 17.547 1.00 18.83 ? 6 DC A "O4'" 1
ATOM 108 C "C3'" . DC A 1 6 ? 5.982 36.537 19.522 1.00 24.90 ? 6 DC A "C3'" 1
ATOM 109 O "O3'" . DC A 1 6 ? 6.726 37.530 20.219 1.00 28.15 ? 6 DC A "O3'" 1
ATOM 110 C "C2'" . DC A 1 6 ? 4.504 36.784 19.779 1.00 19.33 ? 6 DC A "C2'" 1
ATOM 111 C "C1'" . DC A 1 6 ? 3.879 36.026 18.614 1.00 20.10 ? 6 DC A "C1'" 1
ATOM 112 N N1 . DC A 1 6 ? 3.604 34.619 18.972 1.00 21.36 ? 6 DC A N1 1
ATOM 113 C C2 . DC A 1 6 ? 2.413 34.391 19.667 1.00 21.82 ? 6 DC A C2 1
ATOM 114 O O2 . DC A 1 6 ? 1.660 35.325 19.979 1.00 26.36 ? 6 DC A O2 1
ATOM 115 N N3 . DC A 1 6 ? 2.130 33.124 20.068 1.00 20.82 ? 6 DC A N3 1
ATOM 116 C C4 . DC A 1 6 ? 2.969 32.135 19.703 1.00 21.27 ? 6 DC A C4 1
ATOM 117 N N4 . DC A 1 6 ? 2.471 30.904 19.951 1.00 21.98 ? 6 DC A N4 1
ATOM 118 C C5 . DC A 1 6 ? 4.167 32.338 18.960 1.00 20.31 ? 6 DC A C5 1
ATOM 119 C C6 . DC A 1 6 ? 4.474 33.622 18.645 1.00 20.15 ? 6 DC A C6 1
ATOM 120 P P . DC A 1 7 ? 7.367 37.198 21.671 1.00 24.68 ? 7 DC A P 1
ATOM 121 O OP1 . DC A 1 7 ? 8.268 38.333 21.962 1.00 34.06 ? 7 DC A OP1 1
ATOM 122 O OP2 . DC A 1 7 ? 7.855 35.791 21.681 1.00 25.78 ? 7 DC A OP2 1
ATOM 123 O "O5'" . DC A 1 7 ? 6.092 37.281 22.614 1.00 24.10 ? 7 DC A "O5'" 1
ATOM 124 C "C5'" . DC A 1 7 ? 5.204 38.408 22.646 1.00 21.75 ? 7 DC A "C5'" 1
ATOM 125 C "C4'" . DC A 1 7 ? 4.010 38.118 23.526 1.00 22.83 ? 7 DC A "C4'" 1
ATOM 126 O "O4'" . DC A 1 7 ? 3.182 37.097 22.878 1.00 19.11 ? 7 DC A "O4'" 1
ATOM 127 C "C3'" . DC A 1 7 ? 4.378 37.500 24.883 1.00 30.30 ? 7 DC A "C3'" 1
ATOM 128 O "O3'" . DC A 1 7 ? 4.680 38.535 25.833 1.00 24.51 ? 7 DC A "O3'" 1
ATOM 129 C "C2'" . DC A 1 7 ? 3.083 36.793 25.221 1.00 18.36 ? 7 DC A "C2'" 1
ATOM 130 C "C1'" . DC A 1 7 ? 2.620 36.258 23.875 1.00 19.81 ? 7 DC A "C1'" 1
ATOM 131 N N1 . DC A 1 7 ? 3.002 34.857 23.586 1.00 22.09 ? 7 DC A N1 1
ATOM 132 C C2 . DC A 1 7 ? 2.177 33.854 24.108 1.00 24.95 ? 7 DC A C2 1
ATOM 133 O O2 . DC A 1 7 ? 1.189 34.174 24.812 1.00 19.83 ? 7 DC A O2 1
ATOM 134 N N3 . DC A 1 7 ? 2.438 32.566 23.780 1.00 23.37 ? 7 DC A N3 1
ATOM 135 C C4 . DC A 1 7 ? 3.545 32.271 23.093 1.00 18.38 ? 7 DC A C4 1
ATOM 136 N N4 . DC A 1 7 ? 3.811 30.989 22.837 1.00 18.07 ? 7 DC A N4 1
ATOM 137 C C5 . DC A 1 7 ? 4.402 33.275 22.545 1.00 18.10 ? 7 DC A C5 1
ATOM 138 C C6 . DC A 1 7 ? 4.084 34.550 22.814 1.00 18.21 ? 7 DC A C6 1
ATOM 139 P P . DG A 1 8 ? 5.484 38.202 27.193 1.00 24.98 ? 8 DG A P 1
ATOM 140 O OP1 . DG A 1 8 ? 5.626 39.462 27.957 1.00 28.09 ? 8 DG A OP1 1
ATOM 141 O OP2 . DG A 1 8 ? 6.683 37.399 26.898 1.00 25.78 ? 8 DG A OP2 1
ATOM 142 O "O5'" . DG A 1 8 ? 4.381 37.368 27.982 1.00 21.24 ? 8 DG A "O5'" 1
ATOM 143 C "C5'" . DG A 1 8 ? 4.647 36.389 28.991 1.00 23.93 ? 8 DG A "C5'" 1
ATOM 144 C "C4'" . DG A 1 8 ? 3.413 35.550 29.217 1.00 22.82 ? 8 DG A "C4'" 1
ATOM 145 O "O4'" . DG A 1 8 ? 2.886 34.956 28.004 1.00 20.99 ? 8 DG A "O4'" 1
ATOM 146 C "C3'" . DG A 1 8 ? 3.579 34.344 30.149 1.00 23.32 ? 8 DG A "C3'" 1
ATOM 147 O "O3'" . DG A 1 8 ? 3.573 34.841 31.500 1.00 27.45 ? 8 DG A "O3'" 1
ATOM 148 C "C2'" . DG A 1 8 ? 2.242 33.652 29.875 1.00 25.51 ? 8 DG A "C2'" 1
ATOM 149 C "C1'" . DG A 1 8 ? 2.223 33.735 28.351 1.00 18.73 ? 8 DG A "C1'" 1
ATOM 150 N N9 . DG A 1 8 ? 3.001 32.691 27.670 1.00 18.08 ? 8 DG A N9 1
ATOM 151 C C8 . DG A 1 8 ? 4.140 32.818 26.932 1.00 16.60 ? 8 DG A C8 1
ATOM 152 N N7 . DG A 1 8 ? 4.438 31.736 26.254 1.00 21.14 ? 8 DG A N7 1
ATOM 153 C C5 . DG A 1 8 ? 3.508 30.797 26.668 1.00 19.84 ? 8 DG A C5 1
ATOM 154 C C6 . DG A 1 8 ? 3.340 29.434 26.338 1.00 19.55 ? 8 DG A C6 1
ATOM 155 O O6 . DG A 1 8 ? 4.014 28.671 25.623 1.00 16.47 ? 8 DG A O6 1
ATOM 156 N N1 . DG A 1 8 ? 2.259 28.889 27.021 1.00 21.72 ? 8 DG A N1 1
ATOM 157 C C2 . DG A 1 8 ? 1.430 29.559 27.879 1.00 19.60 ? 8 DG A C2 1
ATOM 158 N N2 . DG A 1 8 ? 0.433 28.834 28.413 1.00 27.85 ? 8 DG A N2 1
ATOM 159 N N3 . DG A 1 8 ? 1.546 30.841 28.157 1.00 16.67 ? 8 DG A N3 1
ATOM 160 C C4 . DG A 1 8 ? 2.616 31.379 27.545 1.00 19.21 ? 8 DG A C4 1
ATOM 161 P P . DG A 1 9 ? 4.533 34.062 32.542 1.00 31.56 ? 9 DG A P 1
ATOM 162 O OP1 . DG A 1 9 ? 4.468 34.880 33.769 1.00 29.68 ? 9 DG A OP1 1
ATOM 163 O OP2 . DG A 1 9 ? 5.832 33.787 31.914 1.00 28.72 ? 9 DG A OP2 1
ATOM 164 O "O5'" . DG A 1 9 ? 3.794 32.690 32.787 1.00 29.61 ? 9 DG A "O5'" 1
ATOM 165 C "C5'" . DG A 1 9 ? 2.530 32.543 33.434 1.00 26.49 ? 9 DG A "C5'" 1
ATOM 166 C "C4'" . DG A 1 9 ? 2.048 31.118 33.309 1.00 27.87 ? 9 DG A "C4'" 1
ATOM 167 O "O4'" . DG A 1 9 ? 1.981 30.761 31.905 1.00 23.97 ? 9 DG A "O4'" 1
ATOM 168 C "C3'" . DG A 1 9 ? 3.014 30.047 33.856 1.00 29.22 ? 9 DG A "C3'" 1
ATOM 169 O "O3'" . DG A 1 9 ? 2.763 29.900 35.267 1.00 42.31 ? 9 DG A "O3'" 1
ATOM 170 C "C2'" . DG A 1 9 ? 2.386 28.816 33.215 1.00 23.00 ? 9 DG A "C2'" 1
ATOM 171 C "C1'" . DG A 1 9 ? 2.078 29.336 31.817 1.00 26.62 ? 9 DG A "C1'" 1
ATOM 172 N N9 . DG A 1 9 ? 3.206 29.063 30.927 1.00 26.25 ? 9 DG A N9 1
ATOM 173 C C8 . DG A 1 9 ? 4.212 29.904 30.553 1.00 24.12 ? 9 DG A C8 1
ATOM 174 N N7 . DG A 1 9 ? 4.990 29.394 29.647 1.00 20.59 ? 9 DG A N7 1
ATOM 175 C C5 . DG A 1 9 ? 4.464 28.135 29.418 1.00 19.37 ? 9 DG A C5 1
ATOM 176 C C6 . DG A 1 9 ? 4.940 27.089 28.585 1.00 15.88 ? 9 DG A C6 1
ATOM 177 O O6 . DG A 1 9 ? 5.851 27.138 27.774 1.00 19.90 ? 9 DG A O6 1
ATOM 178 N N1 . DG A 1 9 ? 4.190 25.935 28.747 1.00 23.86 ? 9 DG A N1 1
ATOM 179 C C2 . DG A 1 9 ? 3.141 25.801 29.613 1.00 24.05 ? 9 DG A C2 1
ATOM 180 N N2 . DG A 1 9 ? 2.530 24.600 29.620 1.00 27.05 ? 9 DG A N2 1
ATOM 181 N N3 . DG A 1 9 ? 2.728 26.738 30.460 1.00 25.12 ? 9 DG A N3 1
ATOM 182 C C4 . DG A 1 9 ? 3.393 27.889 30.239 1.00 30.69 ? 9 DG A C4 1
ATOM 183 P P . DT A 1 10 ? 3.835 29.021 36.101 1.00 41.73 ? 10 DT A P 1
ATOM 184 O OP1 . DT A 1 10 ? 3.372 29.027 37.520 1.00 30.81 ? 10 DT A OP1 1
ATOM 185 O OP2 . DT A 1 10 ? 5.173 29.500 35.696 1.00 45.47 ? 10 DT A OP2 1
ATOM 186 O "O5'" . DT A 1 10 ? 3.678 27.552 35.509 1.00 33.83 ? 10 DT A "O5'" 1
ATOM 187 C "C5'" . DT A 1 10 ? 2.618 26.693 35.966 1.00 43.12 ? 10 DT A "C5'" 1
ATOM 188 C "C4'" . DT A 1 10 ? 2.851 25.277 35.506 1.00 45.29 ? 10 DT A "C4'" 1
ATOM 189 O "O4'" . DT A 1 10 ? 2.898 25.207 34.055 1.00 37.55 ? 10 DT A "O4'" 1
ATOM 190 C "C3'" . DT A 1 10 ? 4.210 24.688 35.931 1.00 38.14 ? 10 DT A "C3'" 1
ATOM 191 O "O3'" . DT A 1 10 ? 4.159 24.220 37.285 1.00 37.18 ? 10 DT A "O3'" 1
ATOM 192 C "C2'" . DT A 1 10 ? 4.272 23.494 34.990 1.00 30.29 ? 10 DT A "C2'" 1
ATOM 193 C "C1'" . DT A 1 10 ? 3.747 24.114 33.691 1.00 36.83 ? 10 DT A "C1'" 1
ATOM 194 N N1 . DT A 1 10 ? 4.859 24.627 32.869 1.00 35.09 ? 10 DT A N1 1
ATOM 195 C C2 . DT A 1 10 ? 5.232 23.893 31.774 1.00 38.69 ? 10 DT A C2 1
ATOM 196 O O2 . DT A 1 10 ? 4.824 22.766 31.540 1.00 35.67 ? 10 DT A O2 1
ATOM 197 N N3 . DT A 1 10 ? 6.128 24.531 30.960 1.00 32.66 ? 10 DT A N3 1
ATOM 198 C C4 . DT A 1 10 ? 6.653 25.803 31.094 1.00 31.44 ? 10 DT A C4 1
ATOM 199 O O4 . DT A 1 10 ? 7.428 26.190 30.219 1.00 33.65 ? 10 DT A O4 1
ATOM 200 C C5 . DT A 1 10 ? 6.211 26.513 32.266 1.00 29.92 ? 10 DT A C5 1
ATOM 201 C C7 . DT A 1 10 ? 6.695 27.889 32.600 1.00 28.35 ? 10 DT A C7 1
ATOM 202 C C6 . DT A 1 10 ? 5.366 25.886 33.087 1.00 30.05 ? 10 DT A C6 1
HETATM 203 MG MG . MG B 2 . ? 7.881 29.452 24.687 1.00 36.07 ? 21 MG A MG 1
HETATM 204 MG MG . MG C 2 . ? -0.296 26.814 18.499 0.50 17.81 ? 22 MG A MG 1
HETATM 205 O O . HOH D 3 . ? -0.716 25.428 16.587 0.50 13.08 ? 101 HOH A O 1
HETATM 206 O O . HOH D 3 . ? 2.494 27.582 21.161 0.50 18.61 ? 102 HOH A O 1
HETATM 207 O O . HOH D 3 . ? -3.802 24.879 16.856 1.00 28.95 ? 103 HOH A O 1
HETATM 208 O O . HOH D 3 . ? 3.946 27.874 17.164 1.00 23.68 ? 104 HOH A O 1
HETATM 209 O O . HOH D 3 . ? -2.745 21.069 8.673 1.00 32.87 ? 105 HOH A O 1
HETATM 210 O O . HOH D 3 . ? 4.183 28.641 19.857 1.00 28.61 ? 106 HOH A O 1
HETATM 211 O O . HOH D 3 . ? 6.527 30.750 21.543 1.00 27.21 ? 107 HOH A O 1
HETATM 212 O O . HOH D 3 . ? -0.664 32.010 29.648 1.00 23.24 ? 108 HOH A O 1
HETATM 213 O O . HOH D 3 . ? 2.936 31.330 10.986 1.00 34.77 ? 109 HOH A O 1
HETATM 214 O O . HOH D 3 . ? 6.634 34.761 26.150 1.00 29.67 ? 110 HOH A O 1
HETATM 215 O O . HOH D 3 . ? 1.820 25.888 8.863 1.00 27.45 ? 111 HOH A O 1
HETATM 216 O O . HOH D 3 . ? 7.614 33.160 20.856 1.00 32.99 ? 112 HOH A O 1
HETATM 217 O O . HOH D 3 . ? 8.056 33.845 23.832 1.00 39.27 ? 113 HOH A O 1
HETATM 218 O O . HOH D 3 . ? 1.076 37.881 19.813 1.00 39.68 ? 114 HOH A O 1
HETATM 219 O O . HOH D 3 . ? 6.746 30.089 17.989 1.00 35.34 ? 115 HOH A O 1
HETATM 220 O O . HOH D 3 . ? 0.917 23.095 16.521 1.00 30.43 ? 116 HOH A O 1
HETATM 221 O O . HOH D 3 . ? 7.220 30.641 28.745 1.00 36.25 ? 117 HOH A O 1
HETATM 222 O O . HOH D 3 . ? 3.488 25.547 17.431 1.00 31.34 ? 118 HOH A O 1
HETATM 223 O O . HOH D 3 . ? 3.966 19.664 17.518 1.00 44.89 ? 119 HOH A O 1
HETATM 224 O O . HOH D 3 . ? 5.886 26.013 38.500 1.00 35.37 ? 120 HOH A O 1
HETATM 225 O O . HOH D 3 . ? 7.575 33.772 28.409 1.00 43.79 ? 121 HOH A O 1
HETATM 226 O O . HOH D 3 . ? 1.621 28.693 8.208 1.00 39.92 ? 122 HOH A O 1
HETATM 227 O O . HOH D 3 . ? 8.175 40.679 23.552 1.00 34.49 ? 123 HOH A O 1
HETATM 228 O O . HOH D 3 . ? -7.276 17.690 19.697 1.00 45.02 ? 124 HOH A O 1
HETATM 229 O O . HOH D 3 . ? 6.198 28.454 24.029 1.00 31.60 ? 125 HOH A O 1
HETATM 230 O O . HOH D 3 . ? 9.535 30.482 25.386 1.00 39.76 ? 126 HOH A O 1
HETATM 231 O O . HOH D 3 . ? 6.806 31.216 24.815 1.00 26.25 ? 127 HOH A O 1
HETATM 232 O O . HOH D 3 . ? 8.342 29.977 22.748 1.00 35.82 ? 128 HOH A O 1
HETATM 233 O O . HOH D 3 . ? 9.016 27.746 24.496 1.00 43.97 ? 129 HOH A O 1
HETATM 234 O O . HOH D 3 . ? 7.383 28.937 26.608 1.00 33.25 ? 130 HOH A O 1
HETATM 235 O O . HOH D 3 . ? -1.877 27.657 17.492 0.50 34.56 ? 131 HOH A O 1
HETATM 236 O O . HOH D 3 . ? 1.279 25.942 19.498 0.50 23.53 ? 132 HOH A O 1
HETATM 237 O O . HOH D 3 . ? -0.884 27.762 20.233 0.50 15.69 ? 133 HOH A O 1
HETATM 238 O O . HOH D 3 . ? 0.897 28.409 18.006 0.50 21.36 ? 134 HOH A O 1
HETATM 239 O O . HOH D 3 . ? 0.274 25.838 16.777 0.50 12.92 ? 135 HOH A O 1
HETATM 240 O O . HOH D 3 . ? -1.487 25.203 19.009 0.50 16.12 ? 136 HOH A O 1
#