HEADER DNA 17-OCT-92 1D93
TITLE STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR PROTEIN-DNA
TITLE 2 INTERACTIONS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA (5'-D(*CP*TP*CP*TP*AP*GP*AP*G)-3');
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS A-DNA, DOUBLE HELIX, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR W.N.HUNTER,B.LANGLOIS D'ESTAINTOT,O.KENNARD
REVDAT 4 07-FEB-24 1D93 1 REMARK
REVDAT 3 24-FEB-09 1D93 1 VERSN
REVDAT 2 01-APR-03 1D93 1 JRNL
REVDAT 1 15-JUL-93 1D93 0
JRNL AUTH W.N.HUNTER,B.L.D'ESTAINTOT,O.KENNARD
JRNL TITL STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR
JRNL TITL 2 PROTEIN-DNA INTERACTIONS.
JRNL REF BIOCHEMISTRY V. 28 2444 1989
JRNL REFN ISSN 0006-2960
JRNL PMID 2730875
JRNL DOI 10.1021/BI00432A015
REMARK 2
REMARK 2 RESOLUTION. 2.15 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NUCLSQ
REMARK 3 AUTHORS : WESTHOF,DUMAS,MORAS
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 931
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING + TEST SET) : 0.147
REMARK 3 R VALUE (WORKING SET) : NULL
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3
REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA.
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 161
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 35
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA
REMARK 3 SUGAR-BASE BOND DISTANCE (A) : NULL ; NULL
REMARK 3 SUGAR-BASE BOND ANGLE DISTANCE (A) : NULL ; NULL
REMARK 3 PHOSPHATE BONDS DISTANCE (A) : NULL ; NULL
REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A) : NULL ; NULL
REMARK 3
REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL
REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL
REMARK 3
REMARK 3 NON-BONDED CONTACT RESTRAINTS.
REMARK 3 SINGLE TORSION CONTACT (A) : NULL ; NULL
REMARK 3 MULTIPLE TORSION CONTACT (A) : NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 SUGAR-BASE BONDS (A**2) : NULL ; NULL
REMARK 3 SUGAR-BASE ANGLES (A**2) : NULL ; NULL
REMARK 3 PHOSPHATE BONDS (A**2) : NULL ; NULL
REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A**2) : NULL ; NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1D93 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000172690.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 6.80
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : NULL
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : DIFFRACTOMETER
REMARK 200 DETECTOR MANUFACTURER : SYNTEX P21
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1378
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150
REMARK 200 RESOLUTION RANGE LOW (A) : NULL
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: NULL
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 45.72
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.80, VAPOR DIFFUSION, SITTING
REMARK 280 DROP, TEMPERATURE 291.00K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.16500
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.26000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.26000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.24750
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.26000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.26000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 6.08250
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.26000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.26000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.24750
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.26000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.26000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 6.08250
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 12.16500
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 DC A 1 O3' DC A 1 C3' -0.056
REMARK 500 DT A 2 P DT A 2 O5' 0.116
REMARK 500 DT A 2 O5' DT A 2 C5' 0.152
REMARK 500 DT A 2 C5' DT A 2 C4' 0.061
REMARK 500 DT A 2 C3' DT A 2 C2' 0.077
REMARK 500 DT A 2 C2' DT A 2 C1' -0.068
REMARK 500 DT A 2 O3' DT A 2 C3' -0.046
REMARK 500 DT A 2 N3 DT A 2 C4 -0.050
REMARK 500 DT A 2 C4 DT A 2 O4 0.059
REMARK 500 DT A 2 O3' DC A 3 P 0.083
REMARK 500 DC A 3 P DC A 3 OP1 0.122
REMARK 500 DC A 3 P DC A 3 OP2 -0.120
REMARK 500 DC A 3 C2 DC A 3 O2 -0.067
REMARK 500 DT A 4 O4' DT A 4 C4' -0.104
REMARK 500 DT A 4 C4 DT A 4 O4 0.061
REMARK 500 DT A 4 O3' DA A 5 P -0.118
REMARK 500 DA A 5 P DA A 5 OP2 0.132
REMARK 500 DA A 5 P DA A 5 O5' 0.127
REMARK 500 DA A 5 O4' DA A 5 C1' 0.085
REMARK 500 DA A 5 C5 DA A 5 N7 0.051
REMARK 500 DA A 5 C8 DA A 5 N9 0.091
REMARK 500 DG A 6 O4' DG A 6 C4' -0.074
REMARK 500 DG A 6 N1 DG A 6 C2 -0.051
REMARK 500 DG A 6 C2 DG A 6 N3 -0.071
REMARK 500 DG A 6 C8 DG A 6 N9 -0.046
REMARK 500 DG A 6 O3' DA A 7 P -0.086
REMARK 500 DA A 7 P DA A 7 O5' 0.065
REMARK 500 DA A 7 O4' DA A 7 C4' -0.066
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DC A 1 O5' - C5' - C4' ANGL. DEV. = -9.1 DEGREES
REMARK 500 DC A 1 O4' - C4' - C3' ANGL. DEV. = -4.0 DEGREES
REMARK 500 DC A 1 C5' - C4' - C3' ANGL. DEV. = 10.7 DEGREES
REMARK 500 DC A 1 C1' - O4' - C4' ANGL. DEV. = -9.1 DEGREES
REMARK 500 DC A 1 C4' - C3' - C2' ANGL. DEV. = -8.3 DEGREES
REMARK 500 DC A 1 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES
REMARK 500 DC A 1 C4 - C5 - C6 ANGL. DEV. = 4.2 DEGREES
REMARK 500 DC A 1 C5 - C4 - N4 ANGL. DEV. = 5.7 DEGREES
REMARK 500 DC A 1 C3' - O3' - P ANGL. DEV. = 19.1 DEGREES
REMARK 500 DT A 2 O5' - P - OP2 ANGL. DEV. = -7.7 DEGREES
REMARK 500 DT A 2 O5' - C5' - C4' ANGL. DEV. = -8.9 DEGREES
REMARK 500 DT A 2 P - O5' - C5' ANGL. DEV. = -10.1 DEGREES
REMARK 500 DT A 2 O4' - C4' - C3' ANGL. DEV. = -8.7 DEGREES
REMARK 500 DT A 2 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES
REMARK 500 DT A 2 N1 - C2 - O2 ANGL. DEV. = -5.3 DEGREES
REMARK 500 DC A 3 O3' - P - OP1 ANGL. DEV. = -14.2 DEGREES
REMARK 500 DC A 3 O5' - P - OP1 ANGL. DEV. = -5.7 DEGREES
REMARK 500 DC A 3 O5' - P - OP2 ANGL. DEV. = 15.1 DEGREES
REMARK 500 DC A 3 C3' - C2' - C1' ANGL. DEV. = -5.3 DEGREES
REMARK 500 DC A 3 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES
REMARK 500 DT A 4 O3' - P - O5' ANGL. DEV. = 19.9 DEGREES
REMARK 500 DT A 4 O5' - P - OP1 ANGL. DEV. = -9.4 DEGREES
REMARK 500 DT A 4 O5' - P - OP2 ANGL. DEV. = 8.8 DEGREES
REMARK 500 DT A 4 C5' - C4' - O4' ANGL. DEV. = 7.5 DEGREES
REMARK 500 DT A 4 O4' - C1' - N1 ANGL. DEV. = -14.9 DEGREES
REMARK 500 DT A 4 N3 - C4 - C5 ANGL. DEV. = 3.7 DEGREES
REMARK 500 DA A 5 O3' - P - OP1 ANGL. DEV. = 8.5 DEGREES
REMARK 500 DA A 5 P - O5' - C5' ANGL. DEV. = -13.9 DEGREES
REMARK 500 DA A 5 O4' - C4' - C3' ANGL. DEV. = -4.9 DEGREES
REMARK 500 DA A 5 C5' - C4' - C3' ANGL. DEV. = 10.1 DEGREES
REMARK 500 DA A 5 O4' - C1' - N9 ANGL. DEV. = -11.8 DEGREES
REMARK 500 DA A 5 N1 - C2 - N3 ANGL. DEV. = -4.2 DEGREES
REMARK 500 DA A 5 N7 - C8 - N9 ANGL. DEV. = -3.4 DEGREES
REMARK 500 DG A 6 O4' - C4' - C3' ANGL. DEV. = -3.2 DEGREES
REMARK 500 DG A 6 C3' - C2' - C1' ANGL. DEV. = -8.2 DEGREES
REMARK 500 DG A 6 O4' - C1' - N9 ANGL. DEV. = -4.9 DEGREES
REMARK 500 DA A 7 OP1 - P - OP2 ANGL. DEV. = -15.7 DEGREES
REMARK 500 DA A 7 O5' - P - OP1 ANGL. DEV. = 8.4 DEGREES
REMARK 500 DA A 7 O4' - C1' - N9 ANGL. DEV. = -7.5 DEGREES
REMARK 500 DA A 7 C6 - N1 - C2 ANGL. DEV. = 4.2 DEGREES
REMARK 500 DA A 7 N1 - C2 - N3 ANGL. DEV. = -6.6 DEGREES
REMARK 500 DA A 7 C2 - N3 - C4 ANGL. DEV. = 5.4 DEGREES
REMARK 500 DA A 7 N1 - C6 - N6 ANGL. DEV. = 4.9 DEGREES
REMARK 500 DA A 7 C3' - O3' - P ANGL. DEV. = -7.5 DEGREES
REMARK 500 DG A 8 OP1 - P - OP2 ANGL. DEV. = -9.1 DEGREES
REMARK 500 DG A 8 O5' - P - OP2 ANGL. DEV. = 15.7 DEGREES
REMARK 500 DG A 8 P - O5' - C5' ANGL. DEV. = -12.7 DEGREES
REMARK 500 DG A 8 C5' - C4' - O4' ANGL. DEV. = 10.1 DEGREES
REMARK 500 DG A 8 C6 - N1 - C2 ANGL. DEV. = -4.6 DEGREES
REMARK 500 DG A 8 C2 - N3 - C4 ANGL. DEV. = 5.6 DEGREES
REMARK 500
REMARK 500 THIS ENTRY HAS 53 ANGLE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
DBREF 1D93 A 1 8 PDB 1D93 1D93 1 8
SEQRES 1 A 8 DC DT DC DT DA DG DA DG
FORMUL 2 HOH *35(H2 O)
CRYST1 42.520 42.520 24.330 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.023518 0.000000 0.000000 0.00000
SCALE2 0.000000 0.023518 0.000000 0.00000
SCALE3 0.000000 0.000000 0.041102 0.00000
ATOM 1 O5' DC A 1 7.224 -5.783 -5.508 1.00 10.00 O
ATOM 2 C5' DC A 1 6.867 -4.409 -5.051 1.00 10.00 C
ATOM 3 C4' DC A 1 8.151 -3.993 -4.428 1.00 10.00 C
ATOM 4 O4' DC A 1 8.972 -3.363 -5.435 1.00 10.00 O
ATOM 5 C3' DC A 1 8.317 -3.023 -3.292 1.00 10.00 C
ATOM 6 O3' DC A 1 7.671 -3.138 -2.097 1.00 10.00 O
ATOM 7 C2' DC A 1 9.886 -3.197 -3.231 1.00 10.00 C
ATOM 8 C1' DC A 1 10.205 -3.159 -4.698 1.00 10.00 C
ATOM 9 N1 DC A 1 10.707 -1.884 -5.160 1.00 10.00 N
ATOM 10 C2 DC A 1 12.050 -1.633 -4.898 1.00 10.00 C
ATOM 11 O2 DC A 1 12.739 -2.432 -4.287 1.00 10.00 O
ATOM 12 N3 DC A 1 12.599 -0.425 -5.340 1.00 10.00 N
ATOM 13 C4 DC A 1 11.872 0.451 -6.048 1.00 10.00 C
ATOM 14 N4 DC A 1 12.535 1.573 -6.447 1.00 10.00 N
ATOM 15 C5 DC A 1 10.515 0.149 -6.316 1.00 10.00 C
ATOM 16 C6 DC A 1 9.950 -1.003 -5.898 1.00 10.00 C
ATOM 17 P DT A 2 7.437 -2.271 -0.752 1.00 10.00 P
ATOM 18 OP1 DT A 2 6.565 -3.129 0.105 1.00 10.00 O
ATOM 19 OP2 DT A 2 7.097 -0.846 -1.197 1.00 10.00 O
ATOM 20 O5' DT A 2 8.967 -1.947 -0.063 1.00 10.00 O
ATOM 21 C5' DT A 2 9.524 -3.227 0.703 1.00 10.00 C
ATOM 22 C4' DT A 2 11.004 -2.772 0.980 1.00 10.00 C
ATOM 23 O4' DT A 2 11.366 -2.203 -0.311 1.00 10.00 O
ATOM 24 C3' DT A 2 11.089 -1.458 1.757 1.00 10.00 C
ATOM 25 O3' DT A 2 11.051 -1.441 3.129 1.00 10.00 O
ATOM 26 C2' DT A 2 12.514 -0.931 1.272 1.00 10.00 C
ATOM 27 C1' DT A 2 12.352 -1.178 -0.148 1.00 10.00 C
ATOM 28 N1 DT A 2 12.097 -0.081 -1.073 1.00 10.00 N
ATOM 29 C2 DT A 2 13.224 0.719 -1.411 1.00 10.00 C
ATOM 30 O2 DT A 2 14.282 0.468 -0.864 1.00 10.00 O
ATOM 31 N3 DT A 2 13.007 1.722 -2.292 1.00 10.00 N
ATOM 32 C4 DT A 2 11.838 1.986 -2.873 1.00 10.00 C
ATOM 33 O4 DT A 2 11.770 2.947 -3.727 1.00 10.00 O
ATOM 34 C5 DT A 2 10.711 1.174 -2.528 1.00 10.00 C
ATOM 35 C7 DT A 2 9.367 1.463 -3.187 1.00 10.00 C
ATOM 36 C6 DT A 2 10.902 0.191 -1.681 1.00 10.00 C
ATOM 37 P DC A 3 10.519 -0.115 4.031 1.00 10.00 P
ATOM 38 OP1 DC A 3 10.821 -0.893 5.404 1.00 10.00 O
ATOM 39 OP2 DC A 3 9.223 0.174 3.715 1.00 10.00 O
ATOM 40 O5' DC A 3 11.748 0.931 4.024 1.00 10.00 O
ATOM 41 C5' DC A 3 12.960 0.391 4.555 1.00 10.00 C
ATOM 42 C4' DC A 3 14.036 1.450 4.465 1.00 10.00 C
ATOM 43 O4' DC A 3 14.372 1.633 3.117 1.00 10.00 O
ATOM 44 C3' DC A 3 13.483 2.789 4.864 1.00 10.00 C
ATOM 45 O3' DC A 3 13.453 3.023 6.241 1.00 10.00 O
ATOM 46 C2' DC A 3 14.521 3.759 4.175 1.00 10.00 C
ATOM 47 C1' DC A 3 14.584 3.061 2.871 1.00 10.00 C
ATOM 48 N1 DC A 3 13.759 3.559 1.793 1.00 10.00 N
ATOM 49 C2 DC A 3 14.270 4.567 1.017 1.00 10.00 C
ATOM 50 O2 DC A 3 15.307 5.068 1.238 1.00 10.00 O
ATOM 51 N3 DC A 3 13.530 5.056 -0.044 1.00 10.00 N
ATOM 52 C4 DC A 3 12.314 4.528 -0.282 1.00 10.00 C
ATOM 53 N4 DC A 3 11.672 5.030 -1.331 1.00 10.00 N
ATOM 54 C5 DC A 3 11.740 3.495 0.516 1.00 10.00 C
ATOM 55 C6 DC A 3 12.501 3.036 1.523 1.00 10.00 C
ATOM 56 P DT A 4 13.432 4.465 6.966 1.00 10.00 P
ATOM 57 OP1 DT A 4 14.529 4.197 8.046 1.00 10.00 O
ATOM 58 OP2 DT A 4 12.003 4.448 7.226 1.00 10.00 O
ATOM 59 O5' DT A 4 14.108 5.787 6.353 1.00 10.00 O
ATOM 60 C5' DT A 4 15.575 5.761 6.246 1.00 10.00 C
ATOM 61 C4' DT A 4 16.107 7.080 5.747 1.00 10.00 C
ATOM 62 O4' DT A 4 16.175 7.254 4.418 1.00 10.00 O
ATOM 63 C3' DT A 4 15.316 8.338 6.228 1.00 10.00 C
ATOM 64 O3' DT A 4 15.545 8.342 7.679 1.00 10.00 O
ATOM 65 C2' DT A 4 15.898 9.397 5.360 1.00 10.00 C
ATOM 66 C1' DT A 4 16.030 8.674 4.036 1.00 10.00 C
ATOM 67 N1 DT A 4 14.742 8.440 3.343 1.00 10.00 N
ATOM 68 C2 DT A 4 14.453 9.138 2.238 1.00 10.00 C
ATOM 69 O2 DT A 4 15.197 10.047 1.842 1.00 10.00 O
ATOM 70 N3 DT A 4 13.304 8.853 1.637 1.00 10.00 N
ATOM 71 C4 DT A 4 12.407 7.883 2.070 1.00 10.00 C
ATOM 72 O4 DT A 4 11.349 7.705 1.355 1.00 10.00 O
ATOM 73 C5 DT A 4 12.739 7.105 3.182 1.00 10.00 C
ATOM 74 C7 DT A 4 11.787 6.021 3.625 1.00 10.00 C
ATOM 75 C6 DT A 4 13.925 7.394 3.798 1.00 10.00 C
ATOM 76 P DA A 5 15.146 9.597 8.374 1.00 10.00 P
ATOM 77 OP1 DA A 5 15.720 9.894 9.686 1.00 10.00 O
ATOM 78 OP2 DA A 5 13.530 9.631 8.316 1.00 10.00 O
ATOM 79 O5' DA A 5 15.707 10.860 7.350 1.00 10.00 O
ATOM 80 C5' DA A 5 14.861 12.071 7.640 1.00 10.00 C
ATOM 81 C4' DA A 5 14.776 12.909 6.447 1.00 10.00 C
ATOM 82 O4' DA A 5 14.444 12.084 5.333 1.00 10.00 O
ATOM 83 C3' DA A 5 13.806 14.023 6.231 1.00 10.00 C
ATOM 84 O3' DA A 5 14.027 15.069 7.114 1.00 10.00 O
ATOM 85 C2' DA A 5 14.180 14.385 4.732 1.00 10.00 C
ATOM 86 C1' DA A 5 14.312 13.028 4.168 1.00 10.00 C
ATOM 87 N9 DA A 5 13.083 12.458 3.642 1.00 10.00 N
ATOM 88 C8 DA A 5 12.395 11.332 4.275 1.00 10.00 C
ATOM 89 N7 DA A 5 11.323 11.030 3.615 1.00 10.00 N
ATOM 90 C5 DA A 5 11.272 11.940 2.501 1.00 10.00 C
ATOM 91 C6 DA A 5 10.383 12.097 1.431 1.00 10.00 C
ATOM 92 N6 DA A 5 9.257 11.387 1.199 1.00 10.00 N
ATOM 93 N1 DA A 5 10.689 13.105 0.564 1.00 10.00 N
ATOM 94 C2 DA A 5 11.808 13.908 0.752 1.00 10.00 C
ATOM 95 N3 DA A 5 12.667 13.789 1.740 1.00 10.00 N
ATOM 96 C4 DA A 5 12.361 12.816 2.560 1.00 10.00 C
ATOM 97 P DG A 6 12.918 16.294 7.379 1.00 10.00 P
ATOM 98 OP1 DG A 6 13.687 17.140 8.241 1.00 10.00 O
ATOM 99 OP2 DG A 6 11.761 15.392 7.771 1.00 10.00 O
ATOM 100 O5' DG A 6 12.531 16.893 5.915 1.00 10.00 O
ATOM 101 C5' DG A 6 13.266 18.054 5.411 1.00 10.00 C
ATOM 102 C4' DG A 6 12.505 18.543 4.194 1.00 10.00 C
ATOM 103 O4' DG A 6 12.424 17.539 3.263 1.00 10.00 O
ATOM 104 C3' DG A 6 11.013 18.879 4.406 1.00 10.00 C
ATOM 105 O3' DG A 6 10.945 20.218 4.927 1.00 10.00 O
ATOM 106 C2' DG A 6 10.524 18.951 2.922 1.00 10.00 C
ATOM 107 C1' DG A 6 11.178 17.663 2.528 1.00 10.00 C
ATOM 108 N9 DG A 6 10.417 16.442 2.941 1.00 10.00 N
ATOM 109 C8 DG A 6 10.677 15.558 3.898 1.00 10.00 C
ATOM 110 N7 DG A 6 9.835 14.550 3.905 1.00 10.00 N
ATOM 111 C5 DG A 6 8.963 14.848 2.854 1.00 10.00 C
ATOM 112 C6 DG A 6 7.802 14.185 2.350 1.00 10.00 C
ATOM 113 O6 DG A 6 7.271 13.109 2.803 1.00 10.00 O
ATOM 114 N1 DG A 6 7.233 14.844 1.304 1.00 10.00 N
ATOM 115 C2 DG A 6 7.713 15.979 0.825 1.00 10.00 C
ATOM 116 N2 DG A 6 7.092 16.438 -0.265 1.00 10.00 N
ATOM 117 N3 DG A 6 8.721 16.596 1.238 1.00 10.00 N
ATOM 118 C4 DG A 6 9.325 16.000 2.258 1.00 10.00 C
ATOM 119 P DA A 7 9.767 20.720 5.747 1.00 10.00 P
ATOM 120 OP1 DA A 7 10.026 22.076 6.267 1.00 10.00 O
ATOM 121 OP2 DA A 7 9.703 19.848 7.005 1.00 10.00 O
ATOM 122 O5' DA A 7 8.504 20.486 4.698 1.00 10.00 O
ATOM 123 C5' DA A 7 8.610 21.298 3.486 1.00 10.00 C
ATOM 124 C4' DA A 7 7.313 21.196 2.764 1.00 10.00 C
ATOM 125 O4' DA A 7 7.275 20.091 1.939 1.00 10.00 O
ATOM 126 C3' DA A 7 6.038 21.200 3.516 1.00 10.00 C
ATOM 127 O3' DA A 7 5.596 22.604 3.654 1.00 10.00 O
ATOM 128 C2' DA A 7 5.051 20.643 2.448 1.00 10.00 C
ATOM 129 C1' DA A 7 5.936 19.619 1.827 1.00 10.00 C
ATOM 130 N9 DA A 7 5.987 18.466 2.708 1.00 10.00 N
ATOM 131 C8 DA A 7 6.837 18.211 3.783 1.00 10.00 C
ATOM 132 N7 DA A 7 6.599 16.995 4.321 1.00 10.00 N
ATOM 133 C5 DA A 7 5.519 16.481 3.601 1.00 10.00 C
ATOM 134 C6 DA A 7 4.779 15.290 3.671 1.00 10.00 C
ATOM 135 N6 DA A 7 5.060 14.419 4.579 1.00 10.00 N
ATOM 136 N1 DA A 7 3.754 15.150 2.786 1.00 10.00 N
ATOM 137 C2 DA A 7 3.444 16.098 1.859 1.00 10.00 C
ATOM 138 N3 DA A 7 4.103 17.238 1.757 1.00 10.00 N
ATOM 139 C4 DA A 7 5.119 17.395 2.586 1.00 10.00 C
ATOM 140 P DG A 8 4.192 22.723 4.392 1.00 10.00 P
ATOM 141 OP1 DG A 8 3.606 24.113 4.192 1.00 10.00 O
ATOM 142 OP2 DG A 8 4.524 22.510 5.776 1.00 10.00 O
ATOM 143 O5' DG A 8 3.287 21.762 3.465 1.00 10.00 O
ATOM 144 C5' DG A 8 2.551 22.608 2.504 1.00 10.00 C
ATOM 145 C4' DG A 8 1.284 21.940 2.143 1.00 10.00 C
ATOM 146 O4' DG A 8 1.293 20.605 1.735 1.00 10.00 O
ATOM 147 C3' DG A 8 0.115 22.144 3.117 1.00 10.00 C
ATOM 148 O3' DG A 8 -0.714 23.173 2.455 1.00 10.00 O
ATOM 149 C2' DG A 8 -0.629 20.826 3.185 1.00 10.00 C
ATOM 150 C1' DG A 8 0.281 19.853 2.513 1.00 10.00 C
ATOM 151 N9 DG A 8 0.944 18.972 3.479 1.00 10.00 N
ATOM 152 C8 DG A 8 2.079 19.245 4.170 1.00 10.00 C
ATOM 153 N7 DG A 8 2.479 18.258 4.924 1.00 10.00 N
ATOM 154 C5 DG A 8 1.526 17.259 4.708 1.00 10.00 C
ATOM 155 C6 DG A 8 1.361 15.970 5.265 1.00 10.00 C
ATOM 156 O6 DG A 8 2.071 15.396 6.112 1.00 10.00 O
ATOM 157 N1 DG A 8 0.264 15.260 4.810 1.00 10.00 N
ATOM 158 C2 DG A 8 -0.604 15.822 3.920 1.00 10.00 C
ATOM 159 N2 DG A 8 -1.607 15.044 3.542 1.00 10.00 N
ATOM 160 N3 DG A 8 -0.468 17.004 3.445 1.00 10.00 N
ATOM 161 C4 DG A 8 0.591 17.697 3.825 1.00 10.00 C
TER 162 DG A 8
HETATM 163 O HOH A 9 15.209 16.060 2.392 1.00 10.00 O
HETATM 164 O HOH A 10 7.955 18.096 7.258 1.00 10.00 O
HETATM 165 O HOH A 11 4.601 25.418 1.856 1.00 10.00 O
HETATM 166 O HOH A 12 8.300 4.269 -0.333 1.00 10.00 O
HETATM 167 O HOH A 13 4.346 -3.538 -1.032 1.00 10.00 O
HETATM 168 O HOH A 14 8.989 5.549 -2.297 1.00 10.00 O
HETATM 169 O HOH A 15 11.778 18.628 9.978 1.00 10.00 O
HETATM 170 O HOH A 16 8.602 11.710 5.423 1.00 10.00 O
HETATM 171 O HOH A 17 7.488 2.466 -6.044 1.00 10.00 O
HETATM 172 O HOH A 18 14.763 5.506 11.430 1.00 10.00 O
HETATM 173 O HOH A 19 9.644 3.959 -7.258 1.00 10.00 O
HETATM 174 O HOH A 20 2.373 -4.278 -3.097 1.00 10.00 O
HETATM 175 O HOH A 21 11.969 6.841 7.688 1.00 10.00 O
HETATM 176 O HOH A 22 11.119 4.545 10.931 1.00 10.00 O
HETATM 177 O HOH A 23 -3.372 18.033 2.586 1.00 10.00 O
HETATM 178 O HOH A 24 14.168 2.203 9.496 1.00 10.00 O
HETATM 179 O HOH A 25 14.036 8.364 11.452 1.00 10.00 O
HETATM 180 O HOH A 26 18.539 4.584 1.285 1.00 10.00 O
HETATM 181 O HOH A 27 6.429 0.804 -3.294 1.00 10.00 O
HETATM 182 O HOH A 28 12.284 23.348 10.476 1.00 10.00 O
HETATM 183 O HOH A 29 5.353 -4.303 4.044 1.00 10.00 O
HETATM 184 O HOH A 30 5.175 -1.922 2.197 1.00 10.00 O
HETATM 185 O HOH A 31 12.322 5.825 12.510 1.00 10.00 O
HETATM 186 O HOH A 32 6.909 1.284 0.277 1.00 10.00 O
HETATM 187 O HOH A 33 -0.897 22.200 -0.195 1.00 10.00 O
HETATM 188 O HOH A 34 14.453 5.153 14.394 1.00 10.00 O
HETATM 189 O HOH A 35 13.385 3.555 11.374 1.00 10.00 O
HETATM 190 O HOH A 36 -0.204 17.918 -1.475 1.00 10.00 O
HETATM 191 O HOH A 37 4.962 9.248 9.664 1.00 10.00 O
HETATM 192 O HOH A 38 7.080 1.879 -9.155 1.00 10.00 O
HETATM 193 O HOH A 39 -2.322 18.075 -0.270 1.00 10.00 O
HETATM 194 O HOH A 40 11.650 23.726 7.817 1.00 10.00 O
HETATM 195 O HOH A 41 2.045 19.206 0.054 1.00 10.00 O
HETATM 196 O HOH A 42 -3.631 21.362 0.869 1.00 10.00 O
HETATM 197 O HOH A 43 11.914 21.124 9.759 1.00 10.00 O
MASTER 321 0 0 0 0 0 0 6 196 1 0 1
END