HEADER DNA 27-FEB-91 1D33
TITLE FORMALDEHYDE CROSS-LINKS DAUNORUBICIN AND DNA EFFICIENTLY: HPLC AND X-
TITLE 2 RAY DIFFRACTION STUDIES
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 5'-D(*CP*GP*CP*(G49)P*CP*G)-3';
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR A.H.-J.WANG,Y.-G.GAO,Y.-C.LIAW,Y.-K.LI
REVDAT 4 07-FEB-24 1D33 1 REMARK LINK
REVDAT 3 24-FEB-09 1D33 1 VERSN
REVDAT 2 01-APR-03 1D33 1 JRNL
REVDAT 1 15-APR-92 1D33 0
JRNL AUTH A.H.WANG,Y.G.GAO,Y.C.LIAW,Y.K.LI
JRNL TITL FORMALDEHYDE CROSS-LINKS DAUNORUBICIN AND DNA EFFICIENTLY:
JRNL TITL 2 HPLC AND X-RAY DIFFRACTION STUDIES.
JRNL REF BIOCHEMISTRY V. 30 3812 1991
JRNL REFN ISSN 0006-2960
JRNL PMID 2018756
JRNL DOI 10.1021/BI00230A002
REMARK 2
REMARK 2 RESOLUTION. 1.50 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : NUCLSQ
REMARK 3 AUTHORS : WESTHOF,DUMAS,MORAS
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL
REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000
REMARK 3 COMPLETENESS FOR RANGE (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 2229
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING + TEST SET) : 0.185
REMARK 3 R VALUE (WORKING SET) : NULL
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3
REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA.
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 121
REMARK 3 HETEROGEN ATOMS : 39
REMARK 3 SOLVENT ATOMS : 65
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA
REMARK 3 SUGAR-BASE BOND DISTANCE (A) : NULL ; NULL
REMARK 3 SUGAR-BASE BOND ANGLE DISTANCE (A) : NULL ; NULL
REMARK 3 PHOSPHATE BONDS DISTANCE (A) : NULL ; NULL
REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A) : NULL ; NULL
REMARK 3
REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL
REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL
REMARK 3
REMARK 3 NON-BONDED CONTACT RESTRAINTS.
REMARK 3 SINGLE TORSION CONTACT (A) : NULL ; NULL
REMARK 3 MULTIPLE TORSION CONTACT (A) : NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 SUGAR-BASE BONDS (A**2) : NULL ; NULL
REMARK 3 SUGAR-BASE ANGLES (A**2) : NULL ; NULL
REMARK 3 PHOSPHATE BONDS (A**2) : NULL ; NULL
REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A**2) : NULL ; NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1D33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000172638.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : 298.00
REMARK 200 PH : 6.00
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : DIFFRACTOMETER
REMARK 200 DETECTOR MANUFACTURER : RIGAKU AFC-5R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500
REMARK 200 RESOLUTION RANGE LOW (A) : NULL
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: NULL
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 55.99
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.00, VAPOR DIFFUSION
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.12150
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 13.97150
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 13.97150
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.06075
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 13.97150
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 13.97150
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.18225
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 13.97150
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 13.97150
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 13.06075
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 13.97150
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 13.97150
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.18225
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 26.12150
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 4290 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 1690 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.1 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 27.94300
REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 27.94300
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 26.12150
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 71 O HOH A 73 1.45
REMARK 500 O HOH A 71 O HOH A 72 1.46
REMARK 500 O HOH A 23 O HOH A 67 1.96
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 42 O HOH A 56 4454 2.01
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 DC A 5 P DC A 5 O5' 0.091
REMARK 500 DC A 5 N3 DC A 5 C4 0.044
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DC A 1 C3' - O3' - P ANGL. DEV. = 11.3 DEGREES
REMARK 500 DG A 2 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES
REMARK 500 DG A 2 O4' - C1' - N9 ANGL. DEV. = 6.5 DEGREES
REMARK 500 DG A 2 C3' - O3' - P ANGL. DEV. = 12.3 DEGREES
REMARK 500 DC A 3 C2 - N3 - C4 ANGL. DEV. = 3.6 DEGREES
REMARK 500 DC A 3 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES
REMARK 500 DC A 5 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES
REMARK 500 DC A 5 O4' - C1' - N1 ANGL. DEV. = 9.9 DEGREES
REMARK 500 DG A 6 O3' - P - OP1 ANGL. DEV. = 7.7 DEGREES
REMARK 500 DG A 6 C6 - N1 - C2 ANGL. DEV. = -3.7 DEGREES
REMARK 500 DG A 6 C5 - C6 - N1 ANGL. DEV. = 4.6 DEGREES
REMARK 500 DG A 6 C5 - C6 - O6 ANGL. DEV. = -4.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 600
REMARK 600 HETEROGEN
REMARK 600
REMARK 600 A METHYLENE GROUP LINKS THE N3* ATOM OF DAUNOMYCIN
REMARK 600 AND N2 G A 4.
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DM1 A 7
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 8
DBREF 1D33 A 1 6 PDB 1D33 1D33 1 6
SEQRES 1 A 6 DC DG DC G49 DC DG
MODRES 1D33 G49 A 4 DG
HET G49 A 4 23
HET DM1 A 7 38
HET MG A 8 1
HETNAM G49 N2-METHYL-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
HETNAM DM1 DAUNOMYCIN
HETNAM MG MAGNESIUM ION
HETSYN DM1 DAUNORUBICIN
FORMUL 1 G49 C11 H16 N5 O7 P
FORMUL 2 DM1 C27 H29 N O10
FORMUL 3 MG MG 2+
FORMUL 4 HOH *65(H2 O)
LINK O3' DC A 3 P G49 A 4 1555 1555 1.61
LINK O3' G49 A 4 P DC A 5 1555 1555 1.63
LINK CM2 G49 A 4 N3' DM1 A 7 1555 1555 1.53
SITE 1 AC1 12 DC A 1 DG A 2 DC A 3 G49 A 4
SITE 2 AC1 12 DC A 5 DG A 6 MG A 8 HOH A 29
SITE 3 AC1 12 HOH A 34 HOH A 36 HOH A 60 HOH A 71
SITE 1 AC2 5 DG A 6 DM1 A 7 HOH A 9 HOH A 10
SITE 2 AC2 5 HOH A 11
CRYST1 27.943 27.943 52.243 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.035787 0.000000 0.000000 0.00000
SCALE2 0.000000 0.035787 0.000000 0.00000
SCALE3 0.000000 0.000000 0.019141 0.00000
ATOM 1 O5' DC A 1 9.425 19.817 22.485 1.00 13.66 O
ATOM 2 C5' DC A 1 9.590 20.946 23.373 1.00 12.53 C
ATOM 3 C4' DC A 1 11.040 20.946 23.807 1.00 12.19 C
ATOM 4 O4' DC A 1 11.267 19.826 24.612 1.00 11.65 O
ATOM 5 C3' DC A 1 12.060 20.840 22.679 1.00 12.06 C
ATOM 6 O3' DC A 1 13.175 21.695 22.872 1.00 12.82 O
ATOM 7 C2' DC A 1 12.479 19.359 22.694 1.00 11.76 C
ATOM 8 C1' DC A 1 12.351 19.018 24.173 1.00 10.68 C
ATOM 9 N1 DC A 1 11.968 17.618 24.298 1.00 9.59 N
ATOM 10 C2 DC A 1 12.974 16.679 24.408 1.00 9.11 C
ATOM 11 O2 DC A 1 14.139 17.062 24.424 1.00 8.99 O
ATOM 12 N3 DC A 1 12.605 15.369 24.455 1.00 8.80 N
ATOM 13 C4 DC A 1 11.306 14.980 24.434 1.00 8.73 C
ATOM 14 N4 DC A 1 11.012 13.684 24.481 1.00 8.49 N
ATOM 15 C5 DC A 1 10.266 15.961 24.345 1.00 8.85 C
ATOM 16 C6 DC A 1 10.641 17.238 24.298 1.00 9.33 C
ATOM 17 P DG A 2 13.726 22.899 21.999 1.00 17.26 P
ATOM 18 OP1 DG A 2 14.673 23.595 22.940 1.00 17.34 O
ATOM 19 OP2 DG A 2 12.605 23.671 21.420 1.00 16.65 O
ATOM 20 O5' DG A 2 14.514 22.097 20.814 1.00 13.46 O
ATOM 21 C5' DG A 2 15.718 21.365 21.090 1.00 12.60 C
ATOM 22 C4' DG A 2 16.056 20.614 19.831 1.00 12.44 C
ATOM 23 O4' DG A 2 15.288 19.418 19.763 1.00 11.71 O
ATOM 24 C3' DG A 2 15.766 21.349 18.531 1.00 12.44 C
ATOM 25 O3' DG A 2 16.811 21.027 17.606 1.00 14.05 O
ATOM 26 C2' DG A 2 14.433 20.770 18.107 1.00 11.91 C
ATOM 27 C1' DG A 2 14.754 19.314 18.447 1.00 10.94 C
ATOM 28 N9 DG A 2 13.572 18.473 18.332 1.00 9.99 N
ATOM 29 C8 DG A 2 12.253 18.800 18.301 1.00 9.67 C
ATOM 30 N7 DG A 2 11.451 17.783 18.160 1.00 9.67 N
ATOM 31 C5 DG A 2 12.309 16.679 18.066 1.00 9.15 C
ATOM 32 C6 DG A 2 12.060 15.307 17.878 1.00 8.96 C
ATOM 33 O6 DG A 2 10.965 14.729 17.789 1.00 9.23 O
ATOM 34 N1 DG A 2 13.186 14.525 17.867 1.00 8.47 N
ATOM 35 C2 DG A 2 14.435 15.059 17.977 1.00 8.30 C
ATOM 36 N2 DG A 2 15.458 14.201 17.951 1.00 7.81 N
ATOM 37 N3 DG A 2 14.709 16.350 18.118 1.00 8.65 N
ATOM 38 C4 DG A 2 13.606 17.087 18.160 1.00 9.29 C
ATOM 39 P DC A 3 17.881 21.930 16.854 1.00 21.18 P
ATOM 40 OP1 DC A 3 18.406 23.084 17.595 1.00 19.46 O
ATOM 41 OP2 DC A 3 16.861 22.360 15.741 1.00 21.64 O
ATOM 42 O5' DC A 3 18.948 20.943 16.232 1.00 15.58 O
ATOM 43 C5' DC A 3 19.946 20.228 17.016 1.00 14.87 C
ATOM 44 C4' DC A 3 19.851 18.795 16.540 1.00 14.15 C
ATOM 45 O4' DC A 3 18.512 18.325 16.665 1.00 13.89 O
ATOM 46 C3' DC A 3 20.197 18.588 15.067 1.00 13.97 C
ATOM 47 O3' DC A 3 21.544 18.261 14.936 1.00 14.04 O
ATOM 48 C2' DC A 3 19.314 17.431 14.623 1.00 13.68 C
ATOM 49 C1' DC A 3 18.375 17.202 15.725 1.00 13.22 C
ATOM 50 N1 DC A 3 16.962 17.101 15.323 1.00 12.39 N
ATOM 51 C2 DC A 3 16.503 15.791 15.203 1.00 11.83 C
ATOM 52 O2 DC A 3 17.294 14.843 15.333 1.00 12.10 O
ATOM 53 N3 DC A 3 15.198 15.626 14.915 1.00 11.53 N
ATOM 54 C4 DC A 3 14.324 16.654 14.790 1.00 11.42 C
ATOM 55 N4 DC A 3 13.049 16.405 14.534 1.00 11.20 N
ATOM 56 C5 DC A 3 14.813 17.990 14.915 1.00 11.67 C
ATOM 57 C6 DC A 3 16.106 18.146 15.203 1.00 11.94 C
HETATM 58 P G49 A 4 22.243 18.049 13.500 1.00 16.37 P
HETATM 59 O1P G49 A 4 23.671 17.878 14.017 1.00 18.21 O
HETATM 60 O2P G49 A 4 21.709 18.954 12.549 1.00 17.12 O
HETATM 61 O5' G49 A 4 21.787 16.523 13.129 1.00 13.39 O
HETATM 62 C5' G49 A 4 22.352 15.416 13.818 1.00 12.63 C
HETATM 63 C4' G49 A 4 21.891 14.150 13.134 1.00 12.34 C
HETATM 64 O4' G49 A 4 20.491 14.014 13.108 1.00 11.97 O
HETATM 65 C3' G49 A 4 22.341 14.078 11.661 1.00 12.34 C
HETATM 66 O3' G49 A 4 22.715 12.717 11.363 1.00 13.36 O
HETATM 67 C2' G49 A 4 21.131 14.603 10.919 1.00 12.03 C
HETATM 68 C1' G49 A 4 20.032 13.966 11.713 1.00 11.20 C
HETATM 69 N9 G49 A 4 18.761 14.693 11.655 1.00 10.61 N
HETATM 70 C8 G49 A 4 18.549 16.034 11.702 1.00 10.25 C
HETATM 71 N7 G49 A 4 17.294 16.366 11.676 1.00 10.29 N
HETATM 72 C5 G49 A 4 16.632 15.137 11.593 1.00 9.93 C
HETATM 73 C6 G49 A 4 15.246 14.852 11.504 1.00 9.83 C
HETATM 74 O6 G49 A 4 14.315 15.651 11.488 1.00 9.78 O
HETATM 75 N1 G49 A 4 14.986 13.516 11.415 1.00 9.75 N
HETATM 76 C2 G49 A 4 15.961 12.577 11.384 1.00 9.46 C
HETATM 77 N2 G49 A 4 15.548 11.300 11.316 1.00 9.84 N
HETATM 78 CM2 G49 A 4 16.674 10.386 11.279 1.00 9.99 C
HETATM 79 N3 G49 A 4 17.288 12.776 11.441 1.00 9.81 N
HETATM 80 C4 G49 A 4 17.520 14.109 11.551 1.00 9.88 C
ATOM 81 P DC A 5 23.542 12.432 9.984 1.00 17.12 P
ATOM 82 OP1 DC A 5 24.185 11.110 10.213 1.00 18.18 O
ATOM 83 OP2 DC A 5 24.149 13.661 9.566 1.00 15.89 O
ATOM 84 O5' DC A 5 22.240 12.239 8.934 1.00 13.08 O
ATOM 85 C5' DC A 5 21.513 11.001 9.106 1.00 12.09 C
ATOM 86 C4' DC A 5 20.385 11.040 8.092 1.00 11.88 C
ATOM 87 O4' DC A 5 19.353 11.879 8.631 1.00 11.42 O
ATOM 88 C3' DC A 5 20.745 11.602 6.718 1.00 11.66 C
ATOM 89 O3' DC A 5 20.130 10.884 5.637 1.00 12.30 O
ATOM 90 C2' DC A 5 20.253 13.047 6.818 1.00 11.24 C
ATOM 91 C1' DC A 5 18.957 12.742 7.607 1.00 10.58 C
ATOM 92 N1 DC A 5 18.286 13.977 7.972 1.00 9.66 N
ATOM 93 C2 DC A 5 16.911 13.843 8.176 1.00 8.97 C
ATOM 94 O2 DC A 5 16.397 12.725 8.186 1.00 8.91 O
ATOM 95 N3 DC A 5 16.196 14.964 8.338 1.00 8.89 N
ATOM 96 C4 DC A 5 16.780 16.213 8.375 1.00 8.90 C
ATOM 97 N4 DC A 5 15.984 17.291 8.542 1.00 8.94 N
ATOM 98 C5 DC A 5 18.166 16.344 8.166 1.00 9.09 C
ATOM 99 C6 DC A 5 18.876 15.207 7.962 1.00 9.35 C
ATOM 100 P DG A 6 20.929 9.677 4.906 1.00 14.47 P
ATOM 101 OP1 DG A 6 21.589 8.651 5.762 1.00 15.13 O
ATOM 102 OP2 DG A 6 21.868 10.448 4.075 1.00 16.46 O
ATOM 103 O5' DG A 6 19.770 8.925 4.112 1.00 10.44 O
ATOM 104 C5' DG A 6 18.803 8.039 4.665 1.00 9.30 C
ATOM 105 C4' DG A 6 17.856 7.584 3.594 1.00 9.16 C
ATOM 106 O4' DG A 6 16.987 8.620 3.150 1.00 8.92 O
ATOM 107 C3' DG A 6 18.554 7.070 2.314 1.00 8.95 C
ATOM 108 O3' DG A 6 17.814 5.985 1.802 1.00 9.32 O
ATOM 109 C2' DG A 6 18.591 8.313 1.452 1.00 8.59 C
ATOM 110 C1' DG A 6 17.255 8.936 1.776 1.00 8.09 C
ATOM 111 N9 DG A 6 17.347 10.389 1.729 1.00 7.54 N
ATOM 112 C8 DG A 6 18.431 11.205 1.776 1.00 7.18 C
ATOM 113 N7 DG A 6 18.127 12.460 1.745 1.00 7.53 N
ATOM 114 C5 DG A 6 16.735 12.488 1.661 1.00 7.03 C
ATOM 115 C6 DG A 6 15.793 13.552 1.609 1.00 6.71 C
ATOM 116 O6 DG A 6 16.090 14.740 1.599 1.00 7.24 O
ATOM 117 N1 DG A 6 14.480 13.189 1.546 1.00 6.95 N
ATOM 118 C2 DG A 6 14.100 11.870 1.567 1.00 6.67 C
ATOM 119 N2 DG A 6 12.795 11.638 1.499 1.00 6.99 N
ATOM 120 N3 DG A 6 14.941 10.836 1.609 1.00 6.91 N
ATOM 121 C4 DG A 6 16.229 11.216 1.677 1.00 7.06 C
TER 122 DG A 6
HETATM 123 C1 DM1 A 7 15.263 18.283 5.005 1.00 9.43 C
HETATM 124 C2 DM1 A 7 16.419 19.018 5.052 1.00 9.78 C
HETATM 125 C3 DM1 A 7 17.747 18.367 5.057 1.00 10.12 C
HETATM 126 C4 DM1 A 7 17.786 16.911 5.015 1.00 9.62 C
HETATM 127 O4 DM1 A 7 18.870 16.174 4.979 1.00 10.17 O
HETATM 128 C5 DM1 A 7 16.512 16.263 4.979 1.00 9.33 C
HETATM 129 C6 DM1 A 7 16.537 14.768 4.916 1.00 8.69 C
HETATM 130 O6 DM1 A 7 17.532 14.039 4.895 1.00 9.32 O
HETATM 131 C7 DM1 A 7 15.243 14.069 4.911 1.00 8.47 C
HETATM 132 C8 DM1 A 7 15.260 12.681 4.885 1.00 8.31 C
HETATM 133 O8 DM1 A 7 16.350 11.921 4.906 1.00 8.57 O
HETATM 134 C9 DM1 A 7 14.022 12.016 4.827 1.00 8.52 C
HETATM 135 C10 DM1 A 7 14.067 10.442 4.869 1.00 9.15 C
HETATM 136 O10 DM1 A 7 14.681 10.230 6.217 1.00 9.85 O
HETATM 137 C11 DM1 A 7 12.731 9.822 4.744 1.00 9.39 C
HETATM 138 C12 DM1 A 7 11.560 10.565 5.303 1.00 9.58 C
HETATM 139 O12 DM1 A 7 11.644 10.655 6.776 1.00 9.84 O
HETATM 140 C13 DM1 A 7 10.247 9.864 5.068 1.00 9.92 C
HETATM 141 O13 DM1 A 7 9.649 10.141 4.023 1.00 11.07 O
HETATM 142 C14 DM1 A 7 9.598 8.858 6.045 1.00 10.53 C
HETATM 143 C15 DM1 A 7 11.462 12.044 4.796 1.00 9.05 C
HETATM 144 C16 DM1 A 7 12.778 12.650 4.832 1.00 8.51 C
HETATM 145 C17 DM1 A 7 12.812 14.067 4.848 1.00 8.16 C
HETATM 146 O17 DM1 A 7 11.636 14.782 4.812 1.00 8.52 O
HETATM 147 C18 DM1 A 7 13.960 14.838 4.895 1.00 8.40 C
HETATM 148 C19 DM1 A 7 13.994 16.288 4.921 1.00 8.59 C
HETATM 149 O19 DM1 A 7 12.994 17.006 4.911 1.00 9.07 O
HETATM 150 C20 DM1 A 7 15.304 16.900 4.953 1.00 8.93 C
HETATM 151 C21 DM1 A 7 20.214 16.819 5.141 1.00 10.64 C
HETATM 152 C1' DM1 A 7 15.654 9.249 6.405 1.00 10.20 C
HETATM 153 C2' DM1 A 7 16.674 9.615 7.450 1.00 10.21 C
HETATM 154 C3' DM1 A 7 15.981 9.777 8.813 1.00 10.49 C
HETATM 155 N3' DM1 A 7 17.093 10.034 9.848 1.00 10.43 N
HETATM 156 C4' DM1 A 7 15.196 8.489 9.132 1.00 10.65 C
HETATM 157 O4' DM1 A 7 16.176 7.399 9.284 1.00 11.32 O
HETATM 158 C5' DM1 A 7 14.139 8.257 8.066 1.00 10.59 C
HETATM 159 O5' DM1 A 7 14.922 7.995 6.765 1.00 10.38 O
HETATM 160 C6' DM1 A 7 13.301 6.975 8.166 1.00 10.62 C
HETATM 161 MG MG A 8 19.784 14.421 2.643 1.00 23.36 MG
HETATM 162 O HOH A 9 18.146 16.459 1.285 1.00 28.11 O
HETATM 163 O HOH A 10 22.047 13.298 3.814 1.00 30.61 O
HETATM 164 O HOH A 11 21.293 15.782 0.899 1.00 31.42 O
HETATM 165 O HOH A 12 16.355 19.309 11.843 1.00 27.60 O
HETATM 166 O HOH A 13 11.091 18.076 11.222 1.00 33.85 O
HETATM 167 O HOH A 14 22.631 15.251 7.617 1.00 36.88 O
HETATM 168 O HOH A 15 9.967 5.209 7.194 1.00 25.29 O
HETATM 169 O HOH A 16 8.975 12.038 1.656 1.00 33.24 O
HETATM 170 O HOH A 17 11.588 9.397 1.113 1.00 37.78 O
HETATM 171 O HOH A 18 13.891 7.967 1.212 1.00 33.91 O
HETATM 172 O HOH A 19 17.241 19.817 9.022 1.00 25.48 O
HETATM 173 O HOH A 20 14.011 19.401 1.546 1.00 35.54 O
HETATM 174 O HOH A 21 20.270 19.474 8.375 1.00 47.77 O
HETATM 175 O HOH A 22 24.042 14.497 5.256 1.00 47.18 O
HETATM 176 O HOH A 23 21.625 10.060 1.437 1.00 32.88 O
HETATM 177 O HOH A 24 22.223 17.730 8.719 1.00 40.17 O
HETATM 178 O HOH A 25 13.647 18.507 11.467 1.00 21.09 O
HETATM 179 O HOH A 26 6.055 16.774 7.272 1.00 25.88 O
HETATM 180 O HOH A 27 10.982 3.800 9.257 1.00 33.48 O
HETATM 181 O HOH A 28 6.877 18.498 10.161 1.00 50.44 O
HETATM 182 O HOH A 29 19.085 8.453 10.292 1.00 17.51 O
HETATM 183 O HOH A 30 13.974 21.416 3.025 1.00 45.47 O
HETATM 184 O HOH A 31 21.100 7.430 8.009 1.00 31.67 O
HETATM 185 O HOH A 32 19.957 9.892 12.329 1.00 41.78 O
HETATM 186 O HOH A 33 19.289 21.287 12.162 1.00 46.81 O
HETATM 187 O HOH A 34 15.626 4.585 10.428 1.00 39.07 O
HETATM 188 O HOH A 35 9.791 18.758 6.013 1.00 54.07 O
HETATM 189 O HOH A 36 16.992 6.282 11.964 1.00 39.81 O
HETATM 190 O HOH A 37 10.330 3.513 2.001 1.00 49.45 O
HETATM 191 O HOH A 38 9.786 20.731 2.194 1.00 39.61 O
HETATM 192 O HOH A 39 9.436 20.287 11.666 1.00 50.14 O
HETATM 193 O HOH A 40 9.364 16.299 12.005 1.00 41.35 O
HETATM 194 O HOH A 41 24.329 8.701 9.143 1.00 43.50 O
HETATM 195 O HOH A 42 6.108 11.935 1.134 1.00 47.04 O
HETATM 196 O HOH A 43 28.987 16.285 12.983 1.00 55.56 O
HETATM 197 O HOH A 44 26.305 9.928 12.220 1.00 51.94 O
HETATM 198 O HOH A 45 26.739 13.516 11.561 1.00 43.35 O
HETATM 199 O HOH A 46 14.170 2.817 6.786 1.00 50.83 O
HETATM 200 O HOH A 47 24.741 9.439 6.159 1.00 41.68 O
HETATM 201 O HOH A 48 13.438 21.804 10.668 1.00 47.27 O
HETATM 202 O HOH A 49 27.255 11.823 3.924 1.00 49.24 O
HETATM 203 O HOH A 50 14.005 24.263 5.224 1.00 42.56 O
HETATM 204 O HOH A 51 28.580 13.611 14.476 1.00 53.13 O
HETATM 205 O HOH A 52 26.079 16.506 9.654 1.00 47.28 O
HETATM 206 O HOH A 53 10.208 19.513 8.641 1.00 43.37 O
HETATM 207 O HOH A 54 24.646 17.146 3.809 1.00 45.72 O
HETATM 208 O HOH A 55 24.030 6.080 10.961 1.00 46.27 O
HETATM 209 O HOH A 56 3.230 19.572 12.654 1.00 50.94 O
HETATM 210 O HOH A 57 25.823 16.009 14.085 1.00 50.38 O
HETATM 211 O HOH A 58 12.806 19.882 8.803 1.00 40.25 O
HETATM 212 O HOH A 59 12.024 23.084 8.395 1.00 47.68 O
HETATM 213 O HOH A 60 18.795 6.365 8.197 1.00 43.05 O
HETATM 214 O HOH A 61 16.950 5.510 6.478 1.00 44.29 O
HETATM 215 O HOH A 62 23.989 13.846 1.400 1.00 48.55 O
HETATM 216 O HOH A 63 19.546 21.977 19.983 1.00 36.83 O
HETATM 217 O HOH A 64 7.212 19.577 6.421 1.00 41.10 O
HETATM 218 O HOH A 65 11.337 24.143 6.118 1.00 48.26 O
HETATM 219 O HOH A 66 21.997 18.348 1.729 1.00 45.14 O
HETATM 220 O HOH A 67 21.855 11.770 0.507 1.00 44.12 O
HETATM 221 O HOH A 68 14.128 21.105 14.043 1.00 44.36 O
HETATM 222 O HOH A 69 25.433 10.898 1.980 1.00 42.46 O
HETATM 223 O HOH A 70 11.535 20.326 4.744 1.00 41.18 O
HETATM 224 O HOH A 71 13.354 6.692 4.671 1.00 52.77 O
HETATM 225 O HOH A 72 12.281 5.714 4.775 1.00 52.73 O
HETATM 226 O HOH A 73 14.598 6.326 4.017 1.00 52.72 O
CONECT 47 58
CONECT 58 47 59 60 61
CONECT 59 58
CONECT 60 58
CONECT 61 58 62
CONECT 62 61 63
CONECT 63 62 64 65
CONECT 64 63 68
CONECT 65 63 66 67
CONECT 66 65 81
CONECT 67 65 68
CONECT 68 64 67 69
CONECT 69 68 70 80
CONECT 70 69 71
CONECT 71 70 72
CONECT 72 71 73 80
CONECT 73 72 74 75
CONECT 74 73
CONECT 75 73 76
CONECT 76 75 77 79
CONECT 77 76 78
CONECT 78 77 155
CONECT 79 76 80
CONECT 80 69 72 79
CONECT 81 66
CONECT 123 124 150
CONECT 124 123 125
CONECT 125 124 126
CONECT 126 125 127 128
CONECT 127 126 151
CONECT 128 126 129 150
CONECT 129 128 130 131
CONECT 130 129
CONECT 131 129 132 147
CONECT 132 131 133 134
CONECT 133 132
CONECT 134 132 135 144
CONECT 135 134 136 137
CONECT 136 135 152
CONECT 137 135 138
CONECT 138 137 139 140 143
CONECT 139 138
CONECT 140 138 141 142
CONECT 141 140
CONECT 142 140
CONECT 143 138 144
CONECT 144 134 143 145
CONECT 145 144 146 147
CONECT 146 145
CONECT 147 131 145 148
CONECT 148 147 149 150
CONECT 149 148
CONECT 150 123 128 148
CONECT 151 127
CONECT 152 136 153 159
CONECT 153 152 154
CONECT 154 153 155 156
CONECT 155 78 154
CONECT 156 154 157 158
CONECT 157 156
CONECT 158 156 159 160
CONECT 159 152 158
CONECT 160 158
MASTER 304 0 3 0 0 0 5 6 225 1 63 1
END