data_1D22
#
_entry.id 1D22
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1D22 pdb_00001d22 10.2210/pdb1d22/pdb
RCSB DDFA15 ? ?
WWPDB D_1000172627 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1991-07-15
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_conn
5 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
4 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
5 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
6 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1D22
_pdbx_database_status.recvd_initial_deposition_date 1990-08-08
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site BNL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Gao, Y.-G.' 1
'Liaw, Y.-C.' 2
'Robinson, H.' 3
'Wang, A.H.-J.' 4
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural comparison.'
Biochemistry 29 10307 10316 1990 BICHAW US 0006-2960 0033 ? 2261474 10.1021/bi00497a004
1 'NMR Studies on the Binding of Antitumor Drug Nogalamycin to DNA Hexamer d(CGTACG)'
'Nucleic Acids Res.' 18 4851 4858 1990 NARHAD UK 0305-1048 0389 ? ? ?
2 'Antitumor Drug Nogalamycin Binds DNA in Both Grooves Simultaneously: Molecular Structure of Nogalamycin-DNA Complex'
Biochemistry 28 9913 9918 1989 BICHAW US 0006-2960 0033 ? ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Gao, Y.G.' 1 ?
primary 'Liaw, Y.C.' 2 ?
primary 'Robinson, H.' 3 ?
primary 'Wang, A.H.' 4 ?
1 'Robinson, H.' 5 ?
1 'Liaw, Y.-C.' 6 ?
1 'Van Der Marel, G.A.' 7 ?
1 'Van Boom, J.H.' 8 ?
1 'Wang, A.H.-J.' 9 ?
2 'Liaw, Y.-C.' 10 ?
2 'Gao, Y.-G.' 11 ?
2 'Robinson, H.' 12 ?
2 'Van Der Marel, G.A.' 13 ?
2 'Van Boom, J.H.' 14 ?
2 'Wang, A.H.-J.' 15 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*(5CM)P*GP*TP*(AS)P*(5CM)P*G)-3')
;
1853.336 2 ? ? ? ?
2 non-polymer syn 'U-58872, HYDROXY DERIVATIVE OF NOGALAMYCIN' 803.803 2 ? ? ? ?
3 water nat water 18.015 75 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(5CM)(DG)(DT)(AS)(5CM)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGTACG
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'U-58872, HYDROXY DERIVATIVE OF NOGALAMYCIN' NGU
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 5CM n
1 2 DG n
1 3 DT n
1 4 AS n
1 5 5CM n
1 6 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224
AS 'DNA linking' n
;2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE
;
? 'C10 H14 N5 O5 P S' 347.287
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
NGU non-polymer . 'U-58872, HYDROXY DERIVATIVE OF NOGALAMYCIN' ? 'C39 H49 N O17' 803.803
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 5CM 1 1 1 5CM +C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DT 3 3 3 DT T A . n
A 1 4 AS 4 4 4 AS +A A . n
A 1 5 5CM 5 5 5 5CM +C A . n
A 1 6 DG 6 6 6 DG G A . n
B 1 1 5CM 1 7 7 5CM +C B . n
B 1 2 DG 2 8 8 DG G B . n
B 1 3 DT 3 9 9 DT T B . n
B 1 4 AS 4 10 10 AS +A B . n
B 1 5 5CM 5 11 11 5CM +C B . n
B 1 6 DG 6 12 12 DG G B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NGU 1 13 13 NGU NGU B .
D 2 NGU 1 14 14 NGU NGU B .
E 3 HOH 1 15 15 HOH HOH A .
E 3 HOH 2 27 27 HOH HOH A .
E 3 HOH 3 31 31 HOH HOH A .
E 3 HOH 4 33 33 HOH HOH A .
E 3 HOH 5 35 35 HOH HOH A .
E 3 HOH 6 36 36 HOH HOH A .
E 3 HOH 7 37 37 HOH HOH A .
E 3 HOH 8 38 38 HOH HOH A .
E 3 HOH 9 39 39 HOH HOH A .
E 3 HOH 10 45 45 HOH HOH A .
E 3 HOH 11 46 46 HOH HOH A .
E 3 HOH 12 47 47 HOH HOH A .
E 3 HOH 13 55 55 HOH HOH A .
E 3 HOH 14 56 56 HOH HOH A .
E 3 HOH 15 57 57 HOH HOH A .
E 3 HOH 16 58 58 HOH HOH A .
E 3 HOH 17 59 59 HOH HOH A .
E 3 HOH 18 63 63 HOH HOH A .
E 3 HOH 19 68 68 HOH HOH A .
E 3 HOH 20 69 69 HOH HOH A .
E 3 HOH 21 70 70 HOH HOH A .
E 3 HOH 22 71 71 HOH HOH A .
E 3 HOH 23 72 72 HOH HOH A .
E 3 HOH 24 73 73 HOH HOH A .
E 3 HOH 25 75 75 HOH HOH A .
E 3 HOH 26 76 76 HOH HOH A .
E 3 HOH 27 88 88 HOH HOH A .
F 3 HOH 1 16 16 HOH HOH B .
F 3 HOH 2 17 17 HOH HOH B .
F 3 HOH 3 18 18 HOH HOH B .
F 3 HOH 4 19 19 HOH HOH B .
F 3 HOH 5 20 20 HOH HOH B .
F 3 HOH 6 21 21 HOH HOH B .
F 3 HOH 7 22 22 HOH HOH B .
F 3 HOH 8 23 23 HOH HOH B .
F 3 HOH 9 24 24 HOH HOH B .
F 3 HOH 10 25 25 HOH HOH B .
F 3 HOH 11 26 26 HOH HOH B .
F 3 HOH 12 28 28 HOH HOH B .
F 3 HOH 13 29 29 HOH HOH B .
F 3 HOH 14 30 30 HOH HOH B .
F 3 HOH 15 32 32 HOH HOH B .
F 3 HOH 16 34 34 HOH HOH B .
F 3 HOH 17 40 40 HOH HOH B .
F 3 HOH 18 41 41 HOH HOH B .
F 3 HOH 19 42 42 HOH HOH B .
F 3 HOH 20 43 43 HOH HOH B .
F 3 HOH 21 44 44 HOH HOH B .
F 3 HOH 22 48 48 HOH HOH B .
F 3 HOH 23 49 49 HOH HOH B .
F 3 HOH 24 50 50 HOH HOH B .
F 3 HOH 25 51 51 HOH HOH B .
F 3 HOH 26 52 52 HOH HOH B .
F 3 HOH 27 53 53 HOH HOH B .
F 3 HOH 28 54 54 HOH HOH B .
F 3 HOH 29 60 60 HOH HOH B .
F 3 HOH 30 61 61 HOH HOH B .
F 3 HOH 31 62 62 HOH HOH B .
F 3 HOH 32 64 64 HOH HOH B .
F 3 HOH 33 65 65 HOH HOH B .
F 3 HOH 34 66 66 HOH HOH B .
F 3 HOH 35 67 67 HOH HOH B .
F 3 HOH 36 74 74 HOH HOH B .
F 3 HOH 37 77 77 HOH HOH B .
F 3 HOH 38 78 78 HOH HOH B .
F 3 HOH 39 79 79 HOH HOH B .
F 3 HOH 40 80 80 HOH HOH B .
F 3 HOH 41 81 81 HOH HOH B .
F 3 HOH 42 82 82 HOH HOH B .
F 3 HOH 43 83 83 HOH HOH B .
F 3 HOH 44 84 84 HOH HOH B .
F 3 HOH 45 85 85 HOH HOH B .
F 3 HOH 46 86 86 HOH HOH B .
F 3 HOH 47 87 87 HOH HOH B .
F 3 HOH 48 89 89 HOH HOH B .
#
_software.name NUCLSQ
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 1D22
_cell.length_a 26.270
_cell.length_b 26.270
_cell.length_c 100.230
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1D22
_symmetry.space_group_name_H-M 'P 61'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 169
#
_exptl.entry_id 1D22
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.69
_exptl_crystal.density_percent_sol 54.33
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION'
_exptl_crystal_grow.temp 298.00
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 5.00
_exptl_crystal_grow.pdbx_details 'pH 5.00, VAPOR DIFFUSION, temperature 298.00K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 'PEG 400' ? ? ?
1 3 1 MGCL2 ? ? ?
1 4 1 'NA CACODYLATE' ? ? ?
1 5 2 WATER ? ? ?
1 6 2 'PEG 400' ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 298.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector DIFFRACTOMETER
_diffrn_detector.type 'RIGAKU AFC-5R'
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type RIGAKU
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1D22
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F 2.000
_reflns.d_resolution_low ?
_reflns.d_resolution_high 1.800
_reflns.number_obs 2143
_reflns.number_all 4210
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 1D22
_refine.ls_number_reflns_obs 2143
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 2.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low ?
_refine.ls_d_res_high 1.800
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.196
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 238
_refine_hist.pdbx_number_atoms_ligand 120
_refine_hist.number_atoms_solvent 75
_refine_hist.number_atoms_total 433
_refine_hist.d_res_high 1.800
_refine_hist.d_res_low .
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
n_bond_d 0.025 ? ? ? 'X-RAY DIFFRACTION' ?
n_angle_d 0.040 ? ? ? 'X-RAY DIFFRACTION' ?
n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 1D22
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1D22
_struct.title 'BINDING OF THE ANTITUMOR DRUG NOGALAMYCIN AND ITS DERIVATIVES TO DNA: STRUCTURAL COMPARISON'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1D22
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
F N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1D22
_struct_ref.pdbx_db_accession 1D22
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1D22 A 1 ? 6 ? 1D22 1 ? 6 ? 1 6
2 1 1D22 B 1 ? 6 ? 1D22 7 ? 12 ? 7 12
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A 5CM 1 "O3'" ? ? ? 1_555 A DG 2 P ? ? A 5CM 1 A DG 2 1_555 ? ? ? ? ? ? ? 1.669 ? ?
covale2 covale both ? A DT 3 "O3'" ? ? ? 1_555 A AS 4 P ? ? A DT 3 A AS 4 1_555 ? ? ? ? ? ? ? 1.661 ? ?
covale3 covale both ? A AS 4 "O3'" ? ? ? 1_555 A 5CM 5 P ? ? A AS 4 A 5CM 5 1_555 ? ? ? ? ? ? ? 1.622 ? ?
covale4 covale both ? A 5CM 5 "O3'" ? ? ? 1_555 A DG 6 P ? ? A 5CM 5 A DG 6 1_555 ? ? ? ? ? ? ? 1.613 ? ?
covale5 covale both ? B 5CM 1 "O3'" ? ? ? 1_555 B DG 2 P ? ? B 5CM 7 B DG 8 1_555 ? ? ? ? ? ? ? 1.530 ? ?
covale6 covale both ? B DT 3 "O3'" ? ? ? 1_555 B AS 4 P ? ? B DT 9 B AS 10 1_555 ? ? ? ? ? ? ? 1.605 ? ?
covale7 covale both ? B AS 4 "O3'" ? ? ? 1_555 B 5CM 5 P ? ? B AS 10 B 5CM 11 1_555 ? ? ? ? ? ? ? 1.577 ? ?
covale8 covale both ? B 5CM 5 "O3'" ? ? ? 1_555 B DG 6 P ? ? B 5CM 11 B DG 12 1_555 ? ? ? ? ? ? ? 1.671 ? ?
hydrog1 hydrog ? ? A 5CM 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A 5CM 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A 5CM 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A 5CM 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A 5CM 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A 5CM 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B 5CM 5 N3 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B 5CM 5 O2 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B 5CM 5 N4 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B AS 4 N1 ? ? A DT 3 B AS 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B AS 4 N6 ? ? A DT 3 B AS 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A AS 4 N1 ? ? ? 1_555 B DT 3 N3 ? ? A AS 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A AS 4 N6 ? ? ? 1_555 B DT 3 O4 ? ? A AS 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A 5CM 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A 5CM 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A 5CM 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B 5CM 1 N3 ? ? A DG 6 B 5CM 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B 5CM 1 O2 ? ? A DG 6 B 5CM 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B 5CM 1 N4 ? ? A DG 6 B 5CM 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software B NGU 13 ? 18 'BINDING SITE FOR RESIDUE NGU B 13'
AC2 Software B NGU 14 ? 17 'BINDING SITE FOR RESIDUE NGU B 14'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 18 AS A 4 ? AS A 4 . ? 1_555 ?
2 AC1 18 5CM A 5 ? 5CM A 5 . ? 1_555 ?
3 AC1 18 DG A 6 ? DG A 6 . ? 1_555 ?
4 AC1 18 HOH E . ? HOH A 45 . ? 1_445 ?
5 AC1 18 HOH E . ? HOH A 47 . ? 1_555 ?
6 AC1 18 HOH E . ? HOH A 70 . ? 1_445 ?
7 AC1 18 5CM B 1 ? 5CM B 7 . ? 1_555 ?
8 AC1 18 DG B 2 ? DG B 8 . ? 1_555 ?
9 AC1 18 DT B 3 ? DT B 9 . ? 6_555 ?
10 AC1 18 DT B 3 ? DT B 9 . ? 1_555 ?
11 AC1 18 AS B 4 ? AS B 10 . ? 1_555 ?
12 AC1 18 NGU D . ? NGU B 14 . ? 5_564 ?
13 AC1 18 HOH F . ? HOH B 25 . ? 1_455 ?
14 AC1 18 HOH F . ? HOH B 28 . ? 6_555 ?
15 AC1 18 HOH F . ? HOH B 41 . ? 1_555 ?
16 AC1 18 HOH F . ? HOH B 60 . ? 1_445 ?
17 AC1 18 HOH F . ? HOH B 61 . ? 1_555 ?
18 AC1 18 HOH F . ? HOH B 74 . ? 1_555 ?
19 AC2 17 5CM A 1 ? 5CM A 1 . ? 1_555 ?
20 AC2 17 DG A 2 ? DG A 2 . ? 1_555 ?
21 AC2 17 DT A 3 ? DT A 3 . ? 1_555 ?
22 AC2 17 DT A 3 ? DT A 3 . ? 5_554 ?
23 AC2 17 AS A 4 ? AS A 4 . ? 1_555 ?
24 AC2 17 AS A 4 ? AS A 4 . ? 5_554 ?
25 AC2 17 HOH E . ? HOH A 57 . ? 1_545 ?
26 AC2 17 HOH E . ? HOH A 58 . ? 1_555 ?
27 AC2 17 DG B 2 ? DG B 8 . ? 6_665 ?
28 AC2 17 AS B 4 ? AS B 10 . ? 1_555 ?
29 AC2 17 5CM B 5 ? 5CM B 11 . ? 1_555 ?
30 AC2 17 DG B 6 ? DG B 12 . ? 1_555 ?
31 AC2 17 NGU C . ? NGU B 13 . ? 6_655 ?
32 AC2 17 HOH F . ? HOH B 21 . ? 1_555 ?
33 AC2 17 HOH F . ? HOH B 41 . ? 6_655 ?
34 AC2 17 HOH F . ? HOH B 78 . ? 1_545 ?
35 AC2 17 HOH F . ? HOH B 87 . ? 6_555 ?
#
loop_
_pdbx_validate_symm_contact.id
_pdbx_validate_symm_contact.PDB_model_num
_pdbx_validate_symm_contact.auth_atom_id_1
_pdbx_validate_symm_contact.auth_asym_id_1
_pdbx_validate_symm_contact.auth_comp_id_1
_pdbx_validate_symm_contact.auth_seq_id_1
_pdbx_validate_symm_contact.PDB_ins_code_1
_pdbx_validate_symm_contact.label_alt_id_1
_pdbx_validate_symm_contact.site_symmetry_1
_pdbx_validate_symm_contact.auth_atom_id_2
_pdbx_validate_symm_contact.auth_asym_id_2
_pdbx_validate_symm_contact.auth_comp_id_2
_pdbx_validate_symm_contact.auth_seq_id_2
_pdbx_validate_symm_contact.PDB_ins_code_2
_pdbx_validate_symm_contact.label_alt_id_2
_pdbx_validate_symm_contact.site_symmetry_2
_pdbx_validate_symm_contact.dist
1 1 C26 B NGU 14 ? ? 1_555 O B HOH 87 ? ? 6_555 1.61
2 1 N3 A DG 6 ? ? 1_555 O B HOH 62 ? ? 1_455 1.62
3 1 "C1'" A DG 6 ? ? 1_555 O B HOH 62 ? ? 1_455 1.75
4 1 C4 A DG 6 ? ? 1_555 O B HOH 62 ? ? 1_455 1.87
5 1 N2 A DG 6 ? ? 1_555 O B HOH 25 ? ? 1_455 1.89
6 1 N9 A DG 6 ? ? 1_555 O B HOH 62 ? ? 1_455 1.89
7 1 O B HOH 53 ? ? 1_555 O B HOH 67 ? ? 5_554 2.00
8 1 OP2 B DT 9 ? ? 1_555 O B HOH 53 ? ? 1_455 2.10
9 1 OP2 B DG 8 ? ? 1_555 O B HOH 81 ? ? 1_445 2.14
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? 1.499 1.420 0.079 0.011 N
2 1 P A DT 3 ? ? OP2 A DT 3 ? ? 1.595 1.485 0.110 0.017 N
3 1 P A DT 3 ? ? "O5'" A DT 3 ? ? 1.529 1.593 -0.064 0.010 N
4 1 "C2'" A DT 3 ? ? "C1'" A DT 3 ? ? 1.454 1.518 -0.064 0.010 N
5 1 C4 A DT 3 ? ? O4 A DT 3 ? ? 1.304 1.228 0.076 0.009 N
6 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? 1.486 1.420 0.066 0.011 N
7 1 "O3'" B 5CM 7 ? ? P B DG 8 ? ? 1.530 1.607 -0.077 0.012 Y
8 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? 1.497 1.420 0.077 0.011 N
9 1 "C2'" B DT 9 ? ? "C1'" B DT 9 ? ? 1.455 1.518 -0.063 0.010 N
10 1 C4 B DT 9 ? ? O4 B DT 9 ? ? 1.295 1.228 0.067 0.009 N
11 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? 1.500 1.420 0.080 0.011 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O5'" A DG 2 ? ? P A DG 2 ? ? OP2 A DG 2 ? ? 120.12 110.70 9.42 1.20 N
2 1 "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 99.71 109.40 -9.69 0.80 N
3 1 C6 A DG 2 ? ? N1 A DG 2 ? ? C2 A DG 2 ? ? 120.50 125.10 -4.60 0.60 N
4 1 C5 A DG 2 ? ? C6 A DG 2 ? ? N1 A DG 2 ? ? 115.78 111.50 4.28 0.50 N
5 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DT 3 ? ? 151.01 119.70 31.31 1.20 Y
6 1 "O3'" A DG 2 ? ? P A DT 3 ? ? "O5'" A DT 3 ? ? 117.34 104.00 13.34 1.90 Y
7 1 "O3'" A DG 2 ? ? P A DT 3 ? ? OP2 A DT 3 ? ? 90.30 105.20 -14.90 2.20 Y
8 1 OP1 A DT 3 ? ? P A DT 3 ? ? OP2 A DT 3 ? ? 109.58 119.60 -10.02 1.50 N
9 1 "O5'" A DT 3 ? ? P A DT 3 ? ? OP1 A DT 3 ? ? 118.14 110.70 7.44 1.20 N
10 1 P A DT 3 ? ? "O5'" A DT 3 ? ? "C5'" A DT 3 ? ? 159.08 120.90 38.18 1.60 N
11 1 "O4'" A DT 3 ? ? "C4'" A DT 3 ? ? "C3'" A DT 3 ? ? 96.00 104.50 -8.50 0.40 N
12 1 "C5'" A DT 3 ? ? "C4'" A DT 3 ? ? "O4'" A DT 3 ? ? 119.61 109.80 9.81 1.10 N
13 1 "C4'" A DT 3 ? ? "C3'" A DT 3 ? ? "C2'" A DT 3 ? ? 98.00 102.20 -4.20 0.70 N
14 1 N1 A DT 3 ? ? "C1'" A DT 3 ? ? "C2'" A DT 3 ? ? 124.92 114.30 10.62 1.40 N
15 1 C6 A DT 3 ? ? N1 A DT 3 ? ? C2 A DT 3 ? ? 116.70 121.30 -4.60 0.50 N
16 1 N1 A DT 3 ? ? C2 A DT 3 ? ? N3 A DT 3 ? ? 119.03 114.60 4.43 0.60 N
17 1 N1 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 116.50 123.10 -6.60 0.80 N
18 1 "C3'" A DT 3 ? ? "O3'" A DT 3 ? ? P A AS 4 ? ? 136.09 119.70 16.39 1.20 Y
19 1 "C3'" A AS 4 ? ? "O3'" A AS 4 ? ? P A 5CM 5 ? ? 140.34 119.70 20.64 1.20 Y
20 1 "O3'" A 5CM 5 ? ? P A DG 6 ? ? "O5'" A DG 6 ? ? 89.75 104.00 -14.25 1.90 Y
21 1 "O5'" A DG 6 ? ? P A DG 6 ? ? OP2 A DG 6 ? ? 124.19 110.70 13.49 1.20 N
22 1 "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 103.47 109.40 -5.93 0.80 N
23 1 C6 A DG 6 ? ? N1 A DG 6 ? ? C2 A DG 6 ? ? 120.78 125.10 -4.32 0.60 N
24 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N3 A DG 6 ? ? 127.71 123.90 3.81 0.60 N
25 1 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 114.81 111.50 3.31 0.50 N
26 1 "C3'" B 5CM 7 ? ? "O3'" B 5CM 7 ? ? P B DG 8 ? ? 131.74 119.70 12.04 1.20 Y
27 1 OP1 B DG 8 ? ? P B DG 8 ? ? OP2 B DG 8 ? ? 110.15 119.60 -9.45 1.50 N
28 1 "O5'" B DG 8 ? ? "C5'" B DG 8 ? ? "C4'" B DG 8 ? ? 104.50 109.40 -4.90 0.80 N
29 1 P B DG 8 ? ? "O5'" B DG 8 ? ? "C5'" B DG 8 ? ? 107.94 120.90 -12.96 1.60 N
30 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? "C2'" B DG 8 ? ? 98.50 105.90 -7.40 0.80 N
31 1 "C3'" B DG 8 ? ? "O3'" B DG 8 ? ? P B DT 9 ? ? 133.34 119.70 13.64 1.20 Y
32 1 "O5'" B DT 9 ? ? P B DT 9 ? ? OP2 B DT 9 ? ? 122.32 110.70 11.62 1.20 N
33 1 "O4'" B DT 9 ? ? "C4'" B DT 9 ? ? "C3'" B DT 9 ? ? 99.35 104.50 -5.15 0.40 N
34 1 "C1'" B DT 9 ? ? "O4'" B DT 9 ? ? "C4'" B DT 9 ? ? 104.09 110.10 -6.01 1.00 N
35 1 C2 B DT 9 ? ? N3 B DT 9 ? ? C4 B DT 9 ? ? 122.45 127.20 -4.75 0.60 N
36 1 N3 B DT 9 ? ? C4 B DT 9 ? ? C5 B DT 9 ? ? 120.68 115.20 5.48 0.60 N
37 1 "C3'" B DT 9 ? ? "O3'" B DT 9 ? ? P B AS 10 ? ? 134.02 119.70 14.32 1.20 Y
38 1 "C3'" B AS 10 ? ? "O3'" B AS 10 ? ? P B 5CM 11 ? ? 130.10 119.70 10.40 1.20 Y
39 1 "C3'" B 5CM 11 ? ? "O3'" B 5CM 11 ? ? P B DG 12 ? ? 138.21 119.70 18.51 1.20 Y
40 1 "O5'" B DG 12 ? ? P B DG 12 ? ? OP1 B DG 12 ? ? 121.43 110.70 10.73 1.20 N
41 1 "O5'" B DG 12 ? ? P B DG 12 ? ? OP2 B DG 12 ? ? 121.96 110.70 11.26 1.20 N
42 1 C4 B DG 12 ? ? C5 B DG 12 ? ? N7 B DG 12 ? ? 108.24 110.80 -2.56 0.40 N
43 1 N9 B DG 12 ? ? C4 B DG 12 ? ? C5 B DG 12 ? ? 108.17 105.40 2.77 0.40 N
44 1 N1 B DG 12 ? ? C6 B DG 12 ? ? O6 B DG 12 ? ? 114.05 119.90 -5.85 0.60 N
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A 5CM 1 A 5CM 1 ? DC ?
2 A AS 4 A AS 4 ? DA ?
3 A 5CM 5 A 5CM 5 ? DC ?
4 B 5CM 1 B 5CM 7 ? DC ?
5 B AS 4 B AS 10 ? DA ?
6 B 5CM 5 B 5CM 11 ? DC ?
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
loop_
_refine_B_iso.class
_refine_B_iso.details
_refine_B_iso.treatment
_refine_B_iso.pdbx_refine_id
'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION'
'ALL DRUGS' TR isotropic 'X-RAY DIFFRACTION'
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION'
#
loop_
_refine_occupancy.class
_refine_occupancy.treatment
_refine_occupancy.pdbx_refine_id
'ALL ATOMS' fix 'X-RAY DIFFRACTION'
'ALL DRUGS' fix 'X-RAY DIFFRACTION'
'ALL WATERS' fix 'X-RAY DIFFRACTION'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
5CM N1 N N N 1
5CM C2 C N N 2
5CM N3 N N N 3
5CM C4 C N N 4
5CM C5 C N N 5
5CM C5A C N N 6
5CM C6 C N N 7
5CM O2 O N N 8
5CM N4 N N N 9
5CM "C1'" C N R 10
5CM "C2'" C N N 11
5CM "C3'" C N S 12
5CM "C4'" C N R 13
5CM "O4'" O N N 14
5CM "O3'" O N N 15
5CM "C5'" C N N 16
5CM "O5'" O N N 17
5CM P P N N 18
5CM OP1 O N N 19
5CM OP2 O N N 20
5CM OP3 O N N 21
5CM H5A1 H N N 22
5CM H5A2 H N N 23
5CM H5A3 H N N 24
5CM H6 H N N 25
5CM HN41 H N N 26
5CM HN42 H N N 27
5CM "H1'" H N N 28
5CM "H2'" H N N 29
5CM "H2''" H N N 30
5CM "H3'" H N N 31
5CM "H4'" H N N 32
5CM "HO3'" H N N 33
5CM "H5'" H N N 34
5CM "H5''" H N N 35
5CM HOP2 H N N 36
5CM HOP3 H N N 37
AS P P N N 38
AS OP1 O N N 39
AS S2P S N N 40
AS OP3 O N N 41
AS "O5'" O N N 42
AS "C5'" C N N 43
AS "C4'" C N R 44
AS "O4'" O N N 45
AS "C3'" C N S 46
AS "O3'" O N N 47
AS "C2'" C N N 48
AS "C1'" C N R 49
AS N9 N Y N 50
AS C8 C Y N 51
AS N7 N Y N 52
AS C5 C Y N 53
AS C6 C Y N 54
AS N6 N N N 55
AS N1 N Y N 56
AS C2 C Y N 57
AS N3 N Y N 58
AS C4 C Y N 59
AS HOP1 H N N 60
AS HOP3 H N N 61
AS "H5'" H N N 62
AS "H5''" H N N 63
AS "H4'" H N N 64
AS "H3'" H N N 65
AS "HO3'" H N N 66
AS "H2'" H N N 67
AS "H2''" H N N 68
AS "H1'" H N N 69
AS H8 H N N 70
AS HN61 H N N 71
AS HN62 H N N 72
AS H2 H N N 73
DG OP3 O N N 74
DG P P N N 75
DG OP1 O N N 76
DG OP2 O N N 77
DG "O5'" O N N 78
DG "C5'" C N N 79
DG "C4'" C N R 80
DG "O4'" O N N 81
DG "C3'" C N S 82
DG "O3'" O N N 83
DG "C2'" C N N 84
DG "C1'" C N R 85
DG N9 N Y N 86
DG C8 C Y N 87
DG N7 N Y N 88
DG C5 C Y N 89
DG C6 C N N 90
DG O6 O N N 91
DG N1 N N N 92
DG C2 C N N 93
DG N2 N N N 94
DG N3 N N N 95
DG C4 C Y N 96
DG HOP3 H N N 97
DG HOP2 H N N 98
DG "H5'" H N N 99
DG "H5''" H N N 100
DG "H4'" H N N 101
DG "H3'" H N N 102
DG "HO3'" H N N 103
DG "H2'" H N N 104
DG "H2''" H N N 105
DG "H1'" H N N 106
DG H8 H N N 107
DG H1 H N N 108
DG H21 H N N 109
DG H22 H N N 110
DT OP3 O N N 111
DT P P N N 112
DT OP1 O N N 113
DT OP2 O N N 114
DT "O5'" O N N 115
DT "C5'" C N N 116
DT "C4'" C N R 117
DT "O4'" O N N 118
DT "C3'" C N S 119
DT "O3'" O N N 120
DT "C2'" C N N 121
DT "C1'" C N R 122
DT N1 N N N 123
DT C2 C N N 124
DT O2 O N N 125
DT N3 N N N 126
DT C4 C N N 127
DT O4 O N N 128
DT C5 C N N 129
DT C7 C N N 130
DT C6 C N N 131
DT HOP3 H N N 132
DT HOP2 H N N 133
DT "H5'" H N N 134
DT "H5''" H N N 135
DT "H4'" H N N 136
DT "H3'" H N N 137
DT "HO3'" H N N 138
DT "H2'" H N N 139
DT "H2''" H N N 140
DT "H1'" H N N 141
DT H3 H N N 142
DT H71 H N N 143
DT H72 H N N 144
DT H73 H N N 145
DT H6 H N N 146
HOH O O N N 147
HOH H1 H N N 148
HOH H2 H N N 149
NGU C1 C Y N 150
NGU C2 C Y N 151
NGU C3 C Y N 152
NGU C4 C Y N 153
NGU C5 C N N 154
NGU C6 C Y N 155
NGU C7 C N S 156
NGU C8 C N N 157
NGU C9 C N S 158
NGU C10 C N R 159
NGU C11 C Y N 160
NGU C12 C N N 161
NGU C13 C N N 162
NGU C14 C N N 163
NGU C15 C N N 164
NGU C16 C Y N 165
NGU C17 C Y N 166
NGU C18 C Y N 167
NGU C19 C Y N 168
NGU C20 C Y N 169
NGU C21 C Y N 170
NGU O1 O N N 171
NGU O4 O N N 172
NGU O5 O N N 173
NGU O6 O N N 174
NGU O7 O N N 175
NGU O9 O N N 176
NGU O10 O N N 177
NGU O14 O N N 178
NGU O12 O N N 179
NGU "C1'" C N R 180
NGU "C2'" C N R 181
NGU "C3'" C N R 182
NGU "C4'" C N S 183
NGU "C5'" C N S 184
NGU C25 C N N 185
NGU C26 C N N 186
NGU C27 C N N 187
NGU C28 C N N 188
NGU C29 C N N 189
NGU "O1'" O N N 190
NGU "O2'" O N N 191
NGU "O3'" O N N 192
NGU "O4'" O N N 193
NGU C30 C N S 194
NGU C31 C N S 195
NGU C32 C N R 196
NGU C33 C N R 197
NGU C34 C N R 198
NGU C22 C N N 199
NGU C23 C N N 200
NGU C24 C N N 201
NGU N1 N N N 202
NGU O2 O N N 203
NGU O15 O N N 204
NGU O16 O N N 205
NGU O23 O N N 206
NGU H3 H N N 207
NGU H7 H N N 208
NGU H81 H N N 209
NGU H82 H N N 210
NGU H10 H N N 211
NGU H11 H N N 212
NGU H131 H N N 213
NGU H132 H N N 214
NGU H133 H N N 215
NGU H151 H N N 216
NGU H152 H N N 217
NGU H153 H N N 218
NGU HO4 H N N 219
NGU HO6 H N N 220
NGU HO9 H N N 221
NGU "H1'" H N N 222
NGU "H2'" H N N 223
NGU "H4'" H N N 224
NGU "H5'" H N N 225
NGU H251 H N N 226
NGU H252 H N N 227
NGU H253 H N N 228
NGU H261 H N N 229
NGU H262 H N N 230
NGU H263 H N N 231
NGU H271 H N N 232
NGU H272 H N N 233
NGU H273 H N N 234
NGU H281 H N N 235
NGU H282 H N N 236
NGU H283 H N N 237
NGU H291 H N N 238
NGU H292 H N N 239
NGU H293 H N N 240
NGU H30 H N N 241
NGU H31 H N N 242
NGU H32 H N N 243
NGU H33 H N N 244
NGU H221 H N N 245
NGU H222 H N N 246
NGU H223 H N N 247
NGU H231 H N N 248
NGU H232 H N N 249
NGU H241 H N N 250
NGU H242 H N N 251
NGU H243 H N N 252
NGU H15 H N N 253
NGU H16 H N N 254
NGU H23 H N N 255
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5CM N1 C2 sing N N 1
5CM N1 C6 sing N N 2
5CM N1 "C1'" sing N N 3
5CM C2 N3 sing N N 4
5CM C2 O2 doub N N 5
5CM N3 C4 doub N N 6
5CM C4 C5 sing N N 7
5CM C4 N4 sing N N 8
5CM C5 C5A sing N N 9
5CM C5 C6 doub N N 10
5CM C5A H5A1 sing N N 11
5CM C5A H5A2 sing N N 12
5CM C5A H5A3 sing N N 13
5CM C6 H6 sing N N 14
5CM N4 HN41 sing N N 15
5CM N4 HN42 sing N N 16
5CM "C1'" "C2'" sing N N 17
5CM "C1'" "O4'" sing N N 18
5CM "C1'" "H1'" sing N N 19
5CM "C2'" "C3'" sing N N 20
5CM "C2'" "H2'" sing N N 21
5CM "C2'" "H2''" sing N N 22
5CM "C3'" "C4'" sing N N 23
5CM "C3'" "O3'" sing N N 24
5CM "C3'" "H3'" sing N N 25
5CM "C4'" "O4'" sing N N 26
5CM "C4'" "C5'" sing N N 27
5CM "C4'" "H4'" sing N N 28
5CM "O3'" "HO3'" sing N N 29
5CM "C5'" "O5'" sing N N 30
5CM "C5'" "H5'" sing N N 31
5CM "C5'" "H5''" sing N N 32
5CM "O5'" P sing N N 33
5CM P OP1 doub N N 34
5CM P OP2 sing N N 35
5CM P OP3 sing N N 36
5CM OP2 HOP2 sing N N 37
5CM OP3 HOP3 sing N N 38
AS P OP1 sing N N 39
AS P S2P doub N N 40
AS P OP3 sing N N 41
AS P "O5'" sing N N 42
AS OP1 HOP1 sing N N 43
AS OP3 HOP3 sing N N 44
AS "O5'" "C5'" sing N N 45
AS "C5'" "C4'" sing N N 46
AS "C5'" "H5'" sing N N 47
AS "C5'" "H5''" sing N N 48
AS "C4'" "O4'" sing N N 49
AS "C4'" "C3'" sing N N 50
AS "C4'" "H4'" sing N N 51
AS "O4'" "C1'" sing N N 52
AS "C3'" "O3'" sing N N 53
AS "C3'" "C2'" sing N N 54
AS "C3'" "H3'" sing N N 55
AS "O3'" "HO3'" sing N N 56
AS "C2'" "C1'" sing N N 57
AS "C2'" "H2'" sing N N 58
AS "C2'" "H2''" sing N N 59
AS "C1'" N9 sing N N 60
AS "C1'" "H1'" sing N N 61
AS N9 C8 sing Y N 62
AS N9 C4 sing Y N 63
AS C8 N7 doub Y N 64
AS C8 H8 sing N N 65
AS N7 C5 sing Y N 66
AS C5 C6 sing Y N 67
AS C5 C4 doub Y N 68
AS C6 N6 sing N N 69
AS C6 N1 doub Y N 70
AS N6 HN61 sing N N 71
AS N6 HN62 sing N N 72
AS N1 C2 sing Y N 73
AS C2 N3 doub Y N 74
AS C2 H2 sing N N 75
AS N3 C4 sing Y N 76
DG OP3 P sing N N 77
DG OP3 HOP3 sing N N 78
DG P OP1 doub N N 79
DG P OP2 sing N N 80
DG P "O5'" sing N N 81
DG OP2 HOP2 sing N N 82
DG "O5'" "C5'" sing N N 83
DG "C5'" "C4'" sing N N 84
DG "C5'" "H5'" sing N N 85
DG "C5'" "H5''" sing N N 86
DG "C4'" "O4'" sing N N 87
DG "C4'" "C3'" sing N N 88
DG "C4'" "H4'" sing N N 89
DG "O4'" "C1'" sing N N 90
DG "C3'" "O3'" sing N N 91
DG "C3'" "C2'" sing N N 92
DG "C3'" "H3'" sing N N 93
DG "O3'" "HO3'" sing N N 94
DG "C2'" "C1'" sing N N 95
DG "C2'" "H2'" sing N N 96
DG "C2'" "H2''" sing N N 97
DG "C1'" N9 sing N N 98
DG "C1'" "H1'" sing N N 99
DG N9 C8 sing Y N 100
DG N9 C4 sing Y N 101
DG C8 N7 doub Y N 102
DG C8 H8 sing N N 103
DG N7 C5 sing Y N 104
DG C5 C6 sing N N 105
DG C5 C4 doub Y N 106
DG C6 O6 doub N N 107
DG C6 N1 sing N N 108
DG N1 C2 sing N N 109
DG N1 H1 sing N N 110
DG C2 N2 sing N N 111
DG C2 N3 doub N N 112
DG N2 H21 sing N N 113
DG N2 H22 sing N N 114
DG N3 C4 sing N N 115
DT OP3 P sing N N 116
DT OP3 HOP3 sing N N 117
DT P OP1 doub N N 118
DT P OP2 sing N N 119
DT P "O5'" sing N N 120
DT OP2 HOP2 sing N N 121
DT "O5'" "C5'" sing N N 122
DT "C5'" "C4'" sing N N 123
DT "C5'" "H5'" sing N N 124
DT "C5'" "H5''" sing N N 125
DT "C4'" "O4'" sing N N 126
DT "C4'" "C3'" sing N N 127
DT "C4'" "H4'" sing N N 128
DT "O4'" "C1'" sing N N 129
DT "C3'" "O3'" sing N N 130
DT "C3'" "C2'" sing N N 131
DT "C3'" "H3'" sing N N 132
DT "O3'" "HO3'" sing N N 133
DT "C2'" "C1'" sing N N 134
DT "C2'" "H2'" sing N N 135
DT "C2'" "H2''" sing N N 136
DT "C1'" N1 sing N N 137
DT "C1'" "H1'" sing N N 138
DT N1 C2 sing N N 139
DT N1 C6 sing N N 140
DT C2 O2 doub N N 141
DT C2 N3 sing N N 142
DT N3 C4 sing N N 143
DT N3 H3 sing N N 144
DT C4 O4 doub N N 145
DT C4 C5 sing N N 146
DT C5 C7 sing N N 147
DT C5 C6 doub N N 148
DT C7 H71 sing N N 149
DT C7 H72 sing N N 150
DT C7 H73 sing N N 151
DT C6 H6 sing N N 152
HOH O H1 sing N N 153
HOH O H2 sing N N 154
NGU C1 C2 doub Y N 155
NGU C1 C21 sing Y N 156
NGU C1 O1 sing N N 157
NGU C2 C3 sing Y N 158
NGU C2 C34 sing N N 159
NGU C3 C4 doub Y N 160
NGU C3 H3 sing N N 161
NGU C4 C16 sing Y N 162
NGU C4 O4 sing N N 163
NGU C5 C16 sing N N 164
NGU C5 C17 sing N N 165
NGU C5 O5 doub N N 166
NGU C6 C17 sing Y N 167
NGU C6 C18 doub Y N 168
NGU C6 O6 sing N N 169
NGU C7 C8 sing N N 170
NGU C7 C18 sing N N 171
NGU C7 O7 sing N N 172
NGU C7 H7 sing N N 173
NGU C8 C9 sing N N 174
NGU C8 H81 sing N N 175
NGU C8 H82 sing N N 176
NGU C9 C10 sing N N 177
NGU C9 C13 sing N N 178
NGU C9 O9 sing N N 179
NGU C10 C14 sing N N 180
NGU C10 C19 sing N N 181
NGU C10 H10 sing N N 182
NGU C11 C19 doub Y N 183
NGU C11 C20 sing Y N 184
NGU C11 H11 sing N N 185
NGU C12 C20 sing N N 186
NGU C12 C21 sing N N 187
NGU C12 O12 doub N N 188
NGU C13 H131 sing N N 189
NGU C13 H132 sing N N 190
NGU C13 H133 sing N N 191
NGU C14 O10 sing N N 192
NGU C14 O14 doub N N 193
NGU C15 O10 sing N N 194
NGU C15 H151 sing N N 195
NGU C15 H152 sing N N 196
NGU C15 H153 sing N N 197
NGU C16 C21 doub Y N 198
NGU C17 C20 doub Y N 199
NGU C18 C19 sing Y N 200
NGU O1 C30 sing N N 201
NGU O4 HO4 sing N N 202
NGU O6 HO6 sing N N 203
NGU O7 "C1'" sing N N 204
NGU O9 HO9 sing N N 205
NGU "C1'" "C2'" sing N N 206
NGU "C1'" "O1'" sing N N 207
NGU "C1'" "H1'" sing N N 208
NGU "C2'" "C3'" sing N N 209
NGU "C2'" "O2'" sing N N 210
NGU "C2'" "H2'" sing N N 211
NGU "C3'" "C4'" sing N N 212
NGU "C3'" C28 sing N N 213
NGU "C3'" "O3'" sing N N 214
NGU "C4'" "C5'" sing N N 215
NGU "C4'" "O4'" sing N N 216
NGU "C4'" "H4'" sing N N 217
NGU "C5'" C25 sing N N 218
NGU "C5'" "O1'" sing N N 219
NGU "C5'" "H5'" sing N N 220
NGU C25 H251 sing N N 221
NGU C25 H252 sing N N 222
NGU C25 H253 sing N N 223
NGU C26 "O4'" sing N N 224
NGU C26 H261 sing N N 225
NGU C26 H262 sing N N 226
NGU C26 H263 sing N N 227
NGU C27 "O3'" sing N N 228
NGU C27 H271 sing N N 229
NGU C27 H272 sing N N 230
NGU C27 H273 sing N N 231
NGU C28 H281 sing N N 232
NGU C28 H282 sing N N 233
NGU C28 H283 sing N N 234
NGU C29 "O2'" sing N N 235
NGU C29 H291 sing N N 236
NGU C29 H292 sing N N 237
NGU C29 H293 sing N N 238
NGU C30 C31 sing N N 239
NGU C30 O2 sing N N 240
NGU C30 H30 sing N N 241
NGU C31 C32 sing N N 242
NGU C31 O15 sing N N 243
NGU C31 H31 sing N N 244
NGU C32 C33 sing N N 245
NGU C32 N1 sing N N 246
NGU C32 H32 sing N N 247
NGU C33 C34 sing N N 248
NGU C33 O16 sing N N 249
NGU C33 H33 sing N N 250
NGU C34 C22 sing N N 251
NGU C34 O2 sing N N 252
NGU C22 H221 sing N N 253
NGU C22 H222 sing N N 254
NGU C22 H223 sing N N 255
NGU C23 N1 sing N N 256
NGU C23 O23 sing N N 257
NGU C23 H231 sing N N 258
NGU C23 H232 sing N N 259
NGU C24 N1 sing N N 260
NGU C24 H241 sing N N 261
NGU C24 H242 sing N N 262
NGU C24 H243 sing N N 263
NGU O15 H15 sing N N 264
NGU O16 H16 sing N N 265
NGU O23 H23 sing N N 266
#
_ndb_struct_conf_na.entry_id 1D22
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A 5CM 1 1_555 B DG 6 1_555 0.188 -0.355 -0.080 6.051 -0.080 2.716 1 A_5CM1:DG12_B A 1 ? B 12 ? 19 1
1 A DG 2 1_555 B 5CM 5 1_555 -0.101 -0.274 -0.352 -14.288 2.089 -0.307 2 A_DG2:5CM11_B A 2 ? B 11 ? 19 1
1 A DT 3 1_555 B AS 4 1_555 0.980 -0.586 0.131 -0.124 -3.932 0.416 3 A_DT3:AS10_B A 3 ? B 10 ? 20 1
1 A AS 4 1_555 B DT 3 1_555 0.646 -0.486 0.266 2.012 -7.676 0.986 4 A_AS4:DT9_B A 4 ? B 9 ? 20 1
1 A 5CM 5 1_555 B DG 2 1_555 0.151 -0.352 0.028 8.531 4.627 -3.693 5 A_5CM5:DG8_B A 5 ? B 8 ? 19 1
1 A DG 6 1_555 B 5CM 1 1_555 -0.066 -0.193 0.045 -9.871 4.606 -1.154 6 A_DG6:5CM7_B A 6 ? B 7 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A 5CM 1 1_555 B DG 6 1_555 A DG 2 1_555 B 5CM 5 1_555 0.252 0.466 6.916 2.768 -1.025 36.220 1.049 0.412 6.900 -1.645
-4.444 36.336 1 AA_5CM1DG2:5CM11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ?
1 A DG 2 1_555 B 5CM 5 1_555 A DT 3 1_555 B AS 4 1_555 -0.378 -0.303 3.004 -3.757 0.651 29.339 -0.720 0.005 3.020 1.279
7.378 29.580 2 AA_DG2DT3:AS105CM11_BB A 2 ? B 11 ? A 3 ? B 10 ?
1 A DT 3 1_555 B AS 4 1_555 A AS 4 1_555 B DT 3 1_555 -0.210 -0.760 3.187 0.247 1.859 33.522 -1.610 0.403 3.140 3.220
-0.428 33.573 3 AA_DT3AS4:DT9AS10_BB A 3 ? B 10 ? A 4 ? B 9 ?
1 A AS 4 1_555 B DT 3 1_555 A 5CM 5 1_555 B DG 2 1_555 0.503 -0.399 3.227 2.356 0.611 25.358 -1.078 -0.470 3.249 1.387
-5.350 25.473 4 AA_AS45CM5:DG8DT9_BB A 4 ? B 9 ? A 5 ? B 8 ?
1 A 5CM 5 1_555 B DG 2 1_555 A DG 6 1_555 B 5CM 1 1_555 -0.693 0.791 6.818 -4.725 -2.733 34.784 2.159 -0.323 6.772 -4.537
7.844 35.197 5 AA_5CM5DG6:5CM7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ?
#
_atom_sites.entry_id 1D22
_atom_sites.fract_transf_matrix[1][1] 0.038066
_atom_sites.fract_transf_matrix[1][2] 0.021978
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.043955
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.009977
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
S
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 . 5CM A 1 1 ? 11.337 1.986 27.022 1.00 15.61 ? 1 5CM A N1 1
HETATM 2 C C2 . 5CM A 1 1 ? 11.455 3.401 26.942 1.00 15.33 ? 1 5CM A C2 1
HETATM 3 N N3 . 5CM A 1 1 ? 11.466 3.938 25.719 1.00 14.58 ? 1 5CM A N3 1
HETATM 4 C C4 . 5CM A 1 1 ? 11.370 3.217 24.596 1.00 14.61 ? 1 5CM A C4 1
HETATM 5 C C5 . 5CM A 1 1 ? 11.295 1.818 24.677 1.00 14.78 ? 1 5CM A C5 1
HETATM 6 C C5A . 5CM A 1 1 ? 11.217 1.001 23.404 1.00 14.84 ? 1 5CM A C5A 1
HETATM 7 C C6 . 5CM A 1 1 ? 11.291 1.265 25.889 1.00 15.21 ? 1 5CM A C6 1
HETATM 8 O O2 . 5CM A 1 1 ? 11.522 3.990 28.034 1.00 15.28 ? 1 5CM A O2 1
HETATM 9 N N4 . 5CM A 1 1 ? 11.378 3.799 23.404 1.00 14.03 ? 1 5CM A N4 1
HETATM 10 C "C1'" . 5CM A 1 1 ? 11.483 1.465 28.375 1.00 16.73 ? 1 5CM A "C1'" 1
HETATM 11 C "C2'" . 5CM A 1 1 ? 10.608 1.752 29.498 1.00 17.47 ? 1 5CM A "C2'" 1
HETATM 12 C "C3'" . 5CM A 1 1 ? 10.165 0.293 29.899 1.00 17.96 ? 1 5CM A "C3'" 1
HETATM 13 C "C4'" . 5CM A 1 1 ? 11.513 -0.403 29.708 1.00 18.05 ? 1 5CM A "C4'" 1
HETATM 14 O "O4'" . 5CM A 1 1 ? 11.794 0.030 28.375 1.00 17.65 ? 1 5CM A "O4'" 1
HETATM 15 O "O3'" . 5CM A 1 1 ? 9.637 0.253 31.192 1.00 18.75 ? 1 5CM A "O3'" 1
HETATM 16 C "C5'" . 5CM A 1 1 ? 11.779 -1.843 29.869 1.00 18.13 ? 1 5CM A "C5'" 1
HETATM 17 O "O5'" . 5CM A 1 1 ? 11.366 -2.532 28.656 1.00 18.93 ? 1 5CM A "O5'" 1
ATOM 18 P P . DG A 1 2 ? 8.113 -0.416 31.312 1.00 23.97 ? 2 DG A P 1
ATOM 19 O OP1 . DG A 1 2 ? 8.292 -1.117 32.625 1.00 24.41 ? 2 DG A OP1 1
ATOM 20 O OP2 . DG A 1 2 ? 7.847 -1.242 30.089 1.00 23.35 ? 2 DG A OP2 1
ATOM 21 O "O5'" . DG A 1 2 ? 7.323 0.953 31.542 1.00 20.10 ? 2 DG A "O5'" 1
ATOM 22 C "C5'" . DG A 1 2 ? 7.995 1.968 32.384 1.00 19.11 ? 2 DG A "C5'" 1
ATOM 23 C "C4'" . DG A 1 2 ? 6.969 3.067 32.324 1.00 19.09 ? 2 DG A "C4'" 1
ATOM 24 O "O4'" . DG A 1 2 ? 6.897 3.638 31.041 1.00 18.61 ? 2 DG A "O4'" 1
ATOM 25 C "C3'" . DG A 1 2 ? 5.552 2.696 32.795 1.00 19.12 ? 2 DG A "C3'" 1
ATOM 26 O "O3'" . DG A 1 2 ? 5.123 3.522 33.888 1.00 19.85 ? 2 DG A "O3'" 1
ATOM 27 C "C2'" . DG A 1 2 ? 4.727 2.801 31.522 1.00 18.58 ? 2 DG A "C2'" 1
ATOM 28 C "C1'" . DG A 1 2 ? 5.456 3.895 30.720 1.00 17.76 ? 2 DG A "C1'" 1
ATOM 29 N N9 . DG A 1 2 ? 5.292 3.647 29.267 1.00 16.75 ? 2 DG A N9 1
ATOM 30 C C8 . DG A 1 2 ? 5.282 2.418 28.626 1.00 16.38 ? 2 DG A C8 1
ATOM 31 N N7 . DG A 1 2 ? 5.155 2.537 27.343 1.00 15.94 ? 2 DG A N7 1
ATOM 32 C C5 . DG A 1 2 ? 5.061 3.893 27.092 1.00 15.88 ? 2 DG A C5 1
ATOM 33 C C6 . DG A 1 2 ? 4.918 4.632 25.879 1.00 15.77 ? 2 DG A C6 1
ATOM 34 O O6 . DG A 1 2 ? 4.821 4.191 24.737 1.00 15.63 ? 2 DG A O6 1
ATOM 35 N N1 . DG A 1 2 ? 4.907 5.997 26.010 1.00 15.43 ? 2 DG A N1 1
ATOM 36 C C2 . DG A 1 2 ? 4.991 6.575 27.243 1.00 15.67 ? 2 DG A C2 1
ATOM 37 N N2 . DG A 1 2 ? 4.897 7.922 27.283 1.00 15.39 ? 2 DG A N2 1
ATOM 38 N N3 . DG A 1 2 ? 5.149 5.911 28.395 1.00 15.84 ? 2 DG A N3 1
ATOM 39 C C4 . DG A 1 2 ? 5.165 4.591 28.265 1.00 16.07 ? 2 DG A C4 1
ATOM 40 P P . DT A 1 3 ? 3.984 4.302 34.680 1.00 24.74 ? 3 DT A P 1
ATOM 41 O OP1 . DT A 1 3 ? 4.352 4.211 36.153 1.00 24.79 ? 3 DT A OP1 1
ATOM 42 O OP2 . DT A 1 3 ? 2.936 3.155 34.319 1.00 24.12 ? 3 DT A OP2 1
ATOM 43 O "O5'" . DT A 1 3 ? 3.549 5.660 34.128 1.00 18.57 ? 3 DT A "O5'" 1
ATOM 44 C "C5'" . DT A 1 3 ? 3.495 7.041 33.968 1.00 17.60 ? 3 DT A "C5'" 1
ATOM 45 C "C4'" . DT A 1 3 ? 2.911 7.408 32.685 1.00 17.32 ? 3 DT A "C4'" 1
ATOM 46 O "O4'" . DT A 1 3 ? 2.975 6.500 31.603 1.00 16.80 ? 3 DT A "O4'" 1
ATOM 47 C "C3'" . DT A 1 3 ? 1.350 7.553 32.685 1.00 17.36 ? 3 DT A "C3'" 1
ATOM 48 O "O3'" . DT A 1 3 ? 1.001 8.445 33.687 1.00 18.20 ? 3 DT A "O3'" 1
ATOM 49 C "C2'" . DT A 1 3 ? 1.169 7.917 31.202 1.00 16.59 ? 3 DT A "C2'" 1
ATOM 50 C "C1'" . DT A 1 3 ? 2.186 7.116 30.540 1.00 15.82 ? 3 DT A "C1'" 1
ATOM 51 N N1 . DT A 1 3 ? 1.926 6.124 29.538 1.00 15.13 ? 3 DT A N1 1
ATOM 52 C C2 . DT A 1 3 ? 1.872 6.582 28.225 1.00 14.80 ? 3 DT A C2 1
ATOM 53 O O2 . DT A 1 3 ? 1.926 7.817 28.064 1.00 15.03 ? 3 DT A O2 1
ATOM 54 N N3 . DT A 1 3 ? 1.727 5.685 27.222 1.00 14.45 ? 3 DT A N3 1
ATOM 55 C C4 . DT A 1 3 ? 1.648 4.343 27.413 1.00 14.56 ? 3 DT A C4 1
ATOM 56 O O4 . DT A 1 3 ? 1.505 3.572 26.371 1.00 14.14 ? 3 DT A O4 1
ATOM 57 C C5 . DT A 1 3 ? 1.756 3.879 28.756 1.00 14.33 ? 3 DT A C5 1
ATOM 58 C C7 . DT A 1 3 ? 1.660 2.430 29.067 1.00 14.68 ? 3 DT A C7 1
ATOM 59 C C6 . DT A 1 3 ? 1.891 4.769 29.718 1.00 14.85 ? 3 DT A C6 1
HETATM 60 P P . AS A 1 4 ? 0.449 10.010 33.757 1.00 18.91 ? 4 AS A P 1
HETATM 61 O OP1 . AS A 1 4 ? 1.664 10.791 34.078 1.00 19.10 ? 4 AS A OP1 1
HETATM 62 S S2P . AS A 1 4 ? -0.623 9.532 34.730 1.00 22.87 ? 4 AS A S2P 1
HETATM 63 O "O5'" . AS A 1 4 ? -0.176 10.156 32.274 1.00 15.86 ? 4 AS A "O5'" 1
HETATM 64 C "C5'" . AS A 1 4 ? 0.196 11.464 31.723 1.00 15.04 ? 4 AS A "C5'" 1
HETATM 65 C "C4'" . AS A 1 4 ? -0.525 11.689 30.400 1.00 14.22 ? 4 AS A "C4'" 1
HETATM 66 O "O4'" . AS A 1 4 ? -0.269 10.549 29.578 1.00 13.59 ? 4 AS A "O4'" 1
HETATM 67 C "C3'" . AS A 1 4 ? -2.027 11.842 30.560 1.00 13.96 ? 4 AS A "C3'" 1
HETATM 68 O "O3'" . AS A 1 4 ? -2.500 13.102 30.229 1.00 14.75 ? 4 AS A "O3'" 1
HETATM 69 C "C2'" . AS A 1 4 ? -2.557 10.645 29.808 1.00 13.49 ? 4 AS A "C2'" 1
HETATM 70 C "C1'" . AS A 1 4 ? -1.428 10.336 28.796 1.00 12.44 ? 4 AS A "C1'" 1
HETATM 71 N N9 . AS A 1 4 ? -1.465 8.911 28.415 1.00 11.11 ? 4 AS A N9 1
HETATM 72 C C8 . AS A 1 4 ? -1.483 7.833 29.207 1.00 10.40 ? 4 AS A C8 1
HETATM 73 N N7 . AS A 1 4 ? -1.613 6.693 28.576 1.00 10.32 ? 4 AS A N7 1
HETATM 74 C C5 . AS A 1 4 ? -1.581 7.071 27.222 1.00 10.02 ? 4 AS A C5 1
HETATM 75 C C6 . AS A 1 4 ? -1.654 6.300 26.050 1.00 10.00 ? 4 AS A C6 1
HETATM 76 N N6 . AS A 1 4 ? -1.723 4.982 26.070 1.00 9.72 ? 4 AS A N6 1
HETATM 77 N N1 . AS A 1 4 ? -1.671 7.053 24.937 1.00 9.74 ? 4 AS A N1 1
HETATM 78 C C2 . AS A 1 4 ? -1.639 8.404 24.897 1.00 9.52 ? 4 AS A C2 1
HETATM 79 N N3 . AS A 1 4 ? -1.538 9.193 25.960 1.00 10.06 ? 4 AS A N3 1
HETATM 80 C C4 . AS A 1 4 ? -1.501 8.452 27.112 1.00 10.43 ? 4 AS A C4 1
HETATM 81 N N1 . 5CM A 1 5 ? -5.246 9.705 27.263 1.00 16.76 ? 5 5CM A N1 1
HETATM 82 C C2 . 5CM A 1 5 ? -5.167 8.932 26.100 1.00 16.46 ? 5 5CM A C2 1
HETATM 83 N N3 . 5CM A 1 5 ? -5.006 7.583 26.240 1.00 16.10 ? 5 5CM A N3 1
HETATM 84 C C4 . 5CM A 1 5 ? -4.924 6.991 27.453 1.00 16.00 ? 5 5CM A C4 1
HETATM 85 C C5 . 5CM A 1 5 ? -4.982 7.797 28.616 1.00 16.15 ? 5 5CM A C5 1
HETATM 86 C C5A . 5CM A 1 5 ? -4.927 7.123 29.999 1.00 16.05 ? 5 5CM A C5A 1
HETATM 87 C C6 . 5CM A 1 5 ? -5.159 9.118 28.475 1.00 16.28 ? 5 5CM A C6 1
HETATM 88 O O2 . 5CM A 1 5 ? -5.229 9.544 25.027 1.00 16.35 ? 5 5CM A O2 1
HETATM 89 N N4 . 5CM A 1 5 ? -4.801 5.672 27.603 1.00 15.66 ? 5 5CM A N4 1
HETATM 90 C "C1'" . 5CM A 1 5 ? -5.513 11.109 27.022 1.00 17.32 ? 5 5CM A "C1'" 1
HETATM 91 C "C2'" . 5CM A 1 5 ? -6.817 11.516 27.724 1.00 18.06 ? 5 5CM A "C2'" 1
HETATM 92 C "C3'" . 5CM A 1 5 ? -6.629 13.034 27.884 1.00 18.33 ? 5 5CM A "C3'" 1
HETATM 93 C "C4'" . 5CM A 1 5 ? -5.222 13.323 27.393 1.00 18.38 ? 5 5CM A "C4'" 1
HETATM 94 O "O4'" . 5CM A 1 5 ? -4.574 12.021 27.583 1.00 18.34 ? 5 5CM A "O4'" 1
HETATM 95 O "O3'" . 5CM A 1 5 ? -7.620 13.694 27.092 1.00 18.67 ? 5 5CM A "O3'" 1
HETATM 96 C "C5'" . 5CM A 1 5 ? -4.332 14.356 28.024 1.00 18.55 ? 5 5CM A "C5'" 1
HETATM 97 O "O5'" . 5CM A 1 5 ? -4.567 14.344 29.458 1.00 18.82 ? 5 5CM A "O5'" 1
HETATM 98 P P . 5CM A 1 5 ? -3.637 14.167 30.680 1.00 19.12 ? 5 5CM A P 1
HETATM 99 O OP1 . 5CM A 1 5 ? -3.004 15.400 31.282 1.00 19.66 ? 5 5CM A OP1 1
HETATM 100 O OP2 . 5CM A 1 5 ? -4.303 13.427 31.863 1.00 21.03 ? 5 5CM A OP2 1
ATOM 101 P P . DG A 1 6 ? -8.557 14.886 27.643 1.00 20.00 ? 6 DG A P 1
ATOM 102 O OP1 . DG A 1 6 ? -7.849 16.212 27.593 1.00 20.64 ? 6 DG A OP1 1
ATOM 103 O OP2 . DG A 1 6 ? -8.962 14.481 29.067 1.00 21.14 ? 6 DG A OP2 1
ATOM 104 O "O5'" . DG A 1 6 ? -9.523 14.724 26.330 1.00 17.69 ? 6 DG A "O5'" 1
ATOM 105 C "C5'" . DG A 1 6 ? -8.898 15.261 25.098 1.00 17.05 ? 6 DG A "C5'" 1
ATOM 106 C "C4'" . DG A 1 6 ? -9.793 14.729 23.985 1.00 16.91 ? 6 DG A "C4'" 1
ATOM 107 O "O4'" . DG A 1 6 ? -9.615 13.350 23.905 1.00 16.83 ? 6 DG A "O4'" 1
ATOM 108 C "C3'" . DG A 1 6 ? -11.284 14.945 24.236 1.00 16.93 ? 6 DG A "C3'" 1
ATOM 109 O "O3'" . DG A 1 6 ? -11.790 16.203 23.744 1.00 17.23 ? 6 DG A "O3'" 1
ATOM 110 C "C2'" . DG A 1 6 ? -11.966 13.728 23.644 1.00 16.77 ? 6 DG A "C2'" 1
ATOM 111 C "C1'" . DG A 1 6 ? -10.881 12.695 23.484 1.00 16.22 ? 6 DG A "C1'" 1
ATOM 112 N N9 . DG A 1 6 ? -11.044 11.589 24.446 1.00 15.69 ? 6 DG A N9 1
ATOM 113 C C8 . DG A 1 6 ? -10.872 11.714 25.819 1.00 15.47 ? 6 DG A C8 1
ATOM 114 N N7 . DG A 1 6 ? -11.008 10.577 26.411 1.00 15.34 ? 6 DG A N7 1
ATOM 115 C C5 . DG A 1 6 ? -11.225 9.628 25.418 1.00 14.87 ? 6 DG A C5 1
ATOM 116 C C6 . DG A 1 6 ? -11.406 8.240 25.468 1.00 14.75 ? 6 DG A C6 1
ATOM 117 O O6 . DG A 1 6 ? -11.425 7.526 26.451 1.00 14.52 ? 6 DG A O6 1
ATOM 118 N N1 . DG A 1 6 ? -11.579 7.642 24.256 1.00 14.26 ? 6 DG A N1 1
ATOM 119 C C2 . DG A 1 6 ? -11.594 8.365 23.133 1.00 14.35 ? 6 DG A C2 1
ATOM 120 N N2 . DG A 1 6 ? -11.724 7.667 22.000 1.00 14.50 ? 6 DG A N2 1
ATOM 121 N N3 . DG A 1 6 ? -11.468 9.680 23.013 1.00 14.80 ? 6 DG A N3 1
ATOM 122 C C4 . DG A 1 6 ? -11.246 10.256 24.196 1.00 15.10 ? 6 DG A C4 1
HETATM 123 N N1 . 5CM B 1 1 ? -11.463 2.832 22.822 1.00 14.38 ? 7 5CM B N1 1
HETATM 124 C C2 . 5CM B 1 1 ? -11.498 4.245 22.872 1.00 13.94 ? 7 5CM B C2 1
HETATM 125 N N3 . 5CM B 1 1 ? -11.518 4.834 24.115 1.00 13.30 ? 7 5CM B N3 1
HETATM 126 C C4 . 5CM B 1 1 ? -11.527 4.104 25.248 1.00 13.02 ? 7 5CM B C4 1
HETATM 127 C C5 . 5CM B 1 1 ? -11.505 2.687 25.188 1.00 13.19 ? 7 5CM B C5 1
HETATM 128 C C5A . 5CM B 1 1 ? -11.454 1.847 26.381 1.00 12.90 ? 7 5CM B C5A 1
HETATM 129 C C6 . 5CM B 1 1 ? -11.460 2.114 23.975 1.00 13.76 ? 7 5CM B C6 1
HETATM 130 O O2 . 5CM B 1 1 ? -11.559 4.928 21.840 1.00 13.63 ? 7 5CM B O2 1
HETATM 131 N N4 . 5CM B 1 1 ? -11.488 4.728 26.411 1.00 12.69 ? 7 5CM B N4 1
HETATM 132 C "C1'" . 5CM B 1 1 ? -11.554 2.179 21.499 1.00 15.36 ? 7 5CM B "C1'" 1
HETATM 133 C "C2'" . 5CM B 1 1 ? -10.486 2.559 20.547 1.00 16.15 ? 7 5CM B "C2'" 1
HETATM 134 C "C3'" . 5CM B 1 1 ? -9.351 1.554 20.928 1.00 16.56 ? 7 5CM B "C3'" 1
HETATM 135 C "C4'" . 5CM B 1 1 ? -10.065 0.344 21.419 1.00 16.53 ? 7 5CM B "C4'" 1
HETATM 136 O "O4'" . 5CM B 1 1 ? -11.442 0.708 21.559 1.00 16.21 ? 7 5CM B "O4'" 1
HETATM 137 O "O3'" . 5CM B 1 1 ? -8.422 1.447 19.866 1.00 17.00 ? 7 5CM B "O3'" 1
HETATM 138 C "C5'" . 5CM B 1 1 ? -9.524 -0.375 22.632 1.00 16.93 ? 7 5CM B "C5'" 1
HETATM 139 O "O5'" . 5CM B 1 1 ? -8.330 0.410 23.123 1.00 17.39 ? 7 5CM B "O5'" 1
ATOM 140 P P . DG B 1 2 ? -8.404 0.569 18.613 1.00 22.51 ? 8 DG B P 1
ATOM 141 O OP1 . DG B 1 2 ? -9.835 0.714 18.011 1.00 22.95 ? 8 DG B OP1 1
ATOM 142 O OP2 . DG B 1 2 ? -8.152 -0.874 19.024 1.00 23.05 ? 8 DG B OP2 1
ATOM 143 O "O5'" . DG B 1 2 ? -7.379 1.224 17.580 1.00 17.99 ? 8 DG B "O5'" 1
ATOM 144 C "C5'" . DG B 1 2 ? -7.860 2.575 17.260 1.00 17.06 ? 8 DG B "C5'" 1
ATOM 145 C "C4'" . DG B 1 2 ? -6.721 3.469 17.610 1.00 16.67 ? 8 DG B "C4'" 1
ATOM 146 O "O4'" . DG B 1 2 ? -6.715 3.640 19.004 1.00 16.18 ? 8 DG B "O4'" 1
ATOM 147 C "C3'" . DG B 1 2 ? -5.296 3.099 17.179 1.00 16.57 ? 8 DG B "C3'" 1
ATOM 148 O "O3'" . DG B 1 2 ? -4.608 4.295 16.668 1.00 17.74 ? 8 DG B "O3'" 1
ATOM 149 C "C2'" . DG B 1 2 ? -4.647 2.762 18.543 1.00 16.03 ? 8 DG B "C2'" 1
ATOM 150 C "C1'" . DG B 1 2 ? -5.283 3.886 19.364 1.00 15.07 ? 8 DG B "C1'" 1
ATOM 151 N N9 . DG B 1 2 ? -5.159 3.699 20.808 1.00 14.10 ? 8 DG B N9 1
ATOM 152 C C8 . DG B 1 2 ? -5.180 2.489 21.499 1.00 13.70 ? 8 DG B C8 1
ATOM 153 N N7 . DG B 1 2 ? -5.088 2.635 22.772 1.00 13.31 ? 8 DG B N7 1
ATOM 154 C C5 . DG B 1 2 ? -4.979 4.011 22.973 1.00 13.00 ? 8 DG B C5 1
ATOM 155 C C6 . DG B 1 2 ? -4.888 4.766 24.155 1.00 12.89 ? 8 DG B C6 1
ATOM 156 O O6 . DG B 1 2 ? -4.842 4.323 25.308 1.00 12.91 ? 8 DG B O6 1
ATOM 157 N N1 . DG B 1 2 ? -4.868 6.102 23.965 1.00 12.46 ? 8 DG B N1 1
ATOM 158 C C2 . DG B 1 2 ? -4.907 6.652 22.732 1.00 12.67 ? 8 DG B C2 1
ATOM 159 N N2 . DG B 1 2 ? -4.884 7.967 22.752 1.00 13.00 ? 8 DG B N2 1
ATOM 160 N N3 . DG B 1 2 ? -5.012 6.006 21.580 1.00 13.00 ? 8 DG B N3 1
ATOM 161 C C4 . DG B 1 2 ? -5.073 4.673 21.780 1.00 13.26 ? 8 DG B C4 1
ATOM 162 P P . DT B 1 3 ? -3.751 4.591 15.345 1.00 19.01 ? 9 DT B P 1
ATOM 163 O OP1 . DT B 1 3 ? -4.624 5.028 14.233 1.00 20.01 ? 9 DT B OP1 1
ATOM 164 O OP2 . DT B 1 3 ? -3.057 3.310 15.185 1.00 19.80 ? 9 DT B OP2 1
ATOM 165 O "O5'" . DT B 1 3 ? -2.996 5.913 15.746 1.00 17.37 ? 9 DT B "O5'" 1
ATOM 166 C "C5'" . DT B 1 3 ? -3.645 7.210 15.816 1.00 17.13 ? 9 DT B "C5'" 1
ATOM 167 C "C4'" . DT B 1 3 ? -2.996 7.919 16.969 1.00 17.15 ? 9 DT B "C4'" 1
ATOM 168 O "O4'" . DT B 1 3 ? -2.991 7.028 18.112 1.00 16.92 ? 9 DT B "O4'" 1
ATOM 169 C "C3'" . DT B 1 3 ? -1.479 8.195 16.859 1.00 17.37 ? 9 DT B "C3'" 1
ATOM 170 O "O3'" . DT B 1 3 ? -1.310 9.426 16.167 1.00 18.54 ? 9 DT B "O3'" 1
ATOM 171 C "C2'" . DT B 1 3 ? -1.002 8.229 18.342 1.00 16.75 ? 9 DT B "C2'" 1
ATOM 172 C "C1'" . DT B 1 3 ? -2.134 7.710 19.094 1.00 15.88 ? 9 DT B "C1'" 1
ATOM 173 N N1 . DT B 1 3 ? -1.945 6.768 20.186 1.00 14.97 ? 9 DT B N1 1
ATOM 174 C C2 . DT B 1 3 ? -1.836 7.380 21.439 1.00 14.70 ? 9 DT B C2 1
ATOM 175 O O2 . DT B 1 3 ? -1.828 8.609 21.549 1.00 14.69 ? 9 DT B O2 1
ATOM 176 N N3 . DT B 1 3 ? -1.696 6.541 22.492 1.00 14.40 ? 9 DT B N3 1
ATOM 177 C C4 . DT B 1 3 ? -1.602 5.173 22.341 1.00 14.13 ? 9 DT B C4 1
ATOM 178 O O4 . DT B 1 3 ? -1.462 4.461 23.414 1.00 14.31 ? 9 DT B O4 1
ATOM 179 C C5 . DT B 1 3 ? -1.690 4.589 21.078 1.00 14.06 ? 9 DT B C5 1
ATOM 180 C C7 . DT B 1 3 ? -1.667 3.092 20.928 1.00 13.55 ? 9 DT B C7 1
ATOM 181 C C6 . DT B 1 3 ? -1.895 5.426 20.036 1.00 14.29 ? 9 DT B C6 1
HETATM 182 P P . AS B 1 4 ? -0.076 10.433 15.967 1.00 23.93 ? 10 AS B P 1
HETATM 183 O OP1 . AS B 1 4 ? -0.638 11.794 15.455 1.00 24.30 ? 10 AS B OP1 1
HETATM 184 S S2P . AS B 1 4 ? 0.708 9.580 14.924 1.00 25.74 ? 10 AS B S2P 1
HETATM 185 O "O5'" . AS B 1 4 ? 0.348 10.590 17.500 1.00 17.89 ? 10 AS B "O5'" 1
HETATM 186 C "C5'" . AS B 1 4 ? -0.414 11.623 18.222 1.00 16.43 ? 10 AS B "C5'" 1
HETATM 187 C "C4'" . AS B 1 4 ? 0.363 11.839 19.505 1.00 15.87 ? 10 AS B "C4'" 1
HETATM 188 O "O4'" . AS B 1 4 ? 0.193 10.745 20.357 1.00 15.47 ? 10 AS B "O4'" 1
HETATM 189 C "C3'" . AS B 1 4 ? 1.864 12.042 19.344 1.00 15.68 ? 10 AS B "C3'" 1
HETATM 190 O "O3'" . AS B 1 4 ? 2.242 13.398 19.505 1.00 16.18 ? 10 AS B "O3'" 1
HETATM 191 C "C2'" . AS B 1 4 ? 2.489 11.064 20.327 1.00 15.31 ? 10 AS B "C2'" 1
HETATM 192 C "C1'" . AS B 1 4 ? 1.395 10.606 21.209 1.00 14.36 ? 10 AS B "C1'" 1
HETATM 193 N N9 . AS B 1 4 ? 1.471 9.214 21.640 1.00 13.08 ? 10 AS B N9 1
HETATM 194 C C8 . AS B 1 4 ? 1.424 8.054 20.948 1.00 12.81 ? 10 AS B C8 1
HETATM 195 N N7 . AS B 1 4 ? 1.503 6.957 21.660 1.00 12.24 ? 10 AS B N7 1
HETATM 196 C C5 . AS B 1 4 ? 1.576 7.426 22.953 1.00 12.13 ? 10 AS B C5 1
HETATM 197 C C6 . AS B 1 4 ? 1.642 6.771 24.206 1.00 11.92 ? 10 AS B C6 1
HETATM 198 N N6 . AS B 1 4 ? 1.669 5.476 24.366 1.00 11.43 ? 10 AS B N6 1
HETATM 199 N N1 . AS B 1 4 ? 1.722 7.596 25.258 1.00 11.72 ? 10 AS B N1 1
HETATM 200 C C2 . AS B 1 4 ? 1.705 8.941 25.168 1.00 12.32 ? 10 AS B C2 1
HETATM 201 N N3 . AS B 1 4 ? 1.626 9.646 24.025 1.00 12.28 ? 10 AS B N3 1
HETATM 202 C C4 . AS B 1 4 ? 1.545 8.814 22.973 1.00 12.68 ? 10 AS B C4 1
HETATM 203 N N1 . 5CM B 1 5 ? 5.243 9.669 22.852 1.00 16.47 ? 11 5CM B N1 1
HETATM 204 C C2 . 5CM B 1 5 ? 5.057 8.877 23.985 1.00 16.23 ? 11 5CM B C2 1
HETATM 205 N N3 . 5CM B 1 5 ? 4.823 7.553 23.795 1.00 15.89 ? 11 5CM B N3 1
HETATM 206 C C4 . 5CM B 1 5 ? 4.815 6.980 22.582 1.00 15.62 ? 11 5CM B C4 1
HETATM 207 C C5 . 5CM B 1 5 ? 5.007 7.799 21.449 1.00 15.86 ? 11 5CM B C5 1
HETATM 208 C C5A . 5CM B 1 5 ? 4.953 7.232 20.026 1.00 15.73 ? 11 5CM B C5A 1
HETATM 209 C C6 . 5CM B 1 5 ? 5.209 9.100 21.640 1.00 16.13 ? 11 5CM B C6 1
HETATM 210 O O2 . 5CM B 1 5 ? 5.089 9.432 25.098 1.00 15.84 ? 11 5CM B O2 1
HETATM 211 N N4 . 5CM B 1 5 ? 4.629 5.679 22.462 1.00 15.40 ? 11 5CM B N4 1
HETATM 212 C "C1'" . 5CM B 1 5 ? 5.631 11.041 23.143 1.00 17.37 ? 11 5CM B "C1'" 1
HETATM 213 C "C2'" . 5CM B 1 5 ? 7.161 11.111 22.913 1.00 17.86 ? 11 5CM B "C2'" 1
HETATM 214 C "C3'" . 5CM B 1 5 ? 7.399 12.561 22.542 1.00 18.47 ? 11 5CM B "C3'" 1
HETATM 215 C "C4'" . 5CM B 1 5 ? 6.020 13.179 22.351 1.00 18.43 ? 11 5CM B "C4'" 1
HETATM 216 O "O4'" . 5CM B 1 5 ? 5.077 12.247 22.812 1.00 18.06 ? 11 5CM B "O4'" 1
HETATM 217 O "O3'" . 5CM B 1 5 ? 8.283 13.264 23.364 1.00 19.07 ? 11 5CM B "O3'" 1
HETATM 218 C "C5'" . 5CM B 1 5 ? 5.810 13.525 20.888 1.00 19.04 ? 11 5CM B "C5'" 1
HETATM 219 O "O5'" . 5CM B 1 5 ? 4.433 13.407 20.507 1.00 19.64 ? 11 5CM B "O5'" 1
HETATM 220 P P . 5CM B 1 5 ? 3.648 14.089 19.324 1.00 22.90 ? 11 5CM B P 1
HETATM 221 O OP1 . 5CM B 1 5 ? 3.708 15.646 19.545 1.00 21.94 ? 11 5CM B OP1 1
HETATM 222 O OP2 . 5CM B 1 5 ? 4.076 13.657 17.921 1.00 22.91 ? 11 5CM B OP2 1
ATOM 223 P P . DG B 1 6 ? 9.218 14.647 23.293 1.00 22.65 ? 12 DG B P 1
ATOM 224 O OP1 . DG B 1 6 ? 8.106 15.691 23.263 1.00 21.37 ? 12 DG B OP1 1
ATOM 225 O OP2 . DG B 1 6 ? 9.746 14.374 21.960 1.00 23.37 ? 12 DG B OP2 1
ATOM 226 O "O5'" . DG B 1 6 ? 10.073 14.385 24.606 1.00 17.29 ? 12 DG B "O5'" 1
ATOM 227 C "C5'" . DG B 1 6 ? 9.217 14.385 25.839 1.00 16.35 ? 12 DG B "C5'" 1
ATOM 228 C "C4'" . DG B 1 6 ? 9.912 13.568 26.902 1.00 15.74 ? 12 DG B "C4'" 1
ATOM 229 O "O4'" . DG B 1 6 ? 9.892 12.183 26.631 1.00 15.44 ? 12 DG B "O4'" 1
ATOM 230 C "C3'" . DG B 1 6 ? 11.314 13.942 27.293 1.00 15.73 ? 12 DG B "C3'" 1
ATOM 231 O "O3'" . DG B 1 6 ? 11.534 14.326 28.696 1.00 15.98 ? 12 DG B "O3'" 1
ATOM 232 C "C2'" . DG B 1 6 ? 12.151 12.779 26.751 1.00 15.28 ? 12 DG B "C2'" 1
ATOM 233 C "C1'" . DG B 1 6 ? 11.249 11.571 26.812 1.00 14.22 ? 12 DG B "C1'" 1
ATOM 234 N N9 . DG B 1 6 ? 11.385 10.584 25.729 1.00 12.86 ? 12 DG B N9 1
ATOM 235 C C8 . DG B 1 6 ? 11.297 10.777 24.396 1.00 12.54 ? 12 DG B C8 1
ATOM 236 N N7 . DG B 1 6 ? 11.318 9.676 23.704 1.00 12.42 ? 12 DG B N7 1
ATOM 237 C C5 . DG B 1 6 ? 11.385 8.654 24.647 1.00 12.11 ? 12 DG B C5 1
ATOM 238 C C6 . DG B 1 6 ? 11.439 7.246 24.536 1.00 11.99 ? 12 DG B C6 1
ATOM 239 O O6 . DG B 1 6 ? 11.450 6.504 23.554 1.00 11.87 ? 12 DG B O6 1
ATOM 240 N N1 . DG B 1 6 ? 11.534 6.591 25.729 1.00 11.71 ? 12 DG B N1 1
ATOM 241 C C2 . DG B 1 6 ? 11.517 7.248 26.902 1.00 11.66 ? 12 DG B C2 1
ATOM 242 N N2 . DG B 1 6 ? 11.598 6.525 28.014 1.00 11.34 ? 12 DG B N2 1
ATOM 243 N N3 . DG B 1 6 ? 11.480 8.563 27.032 1.00 12.01 ? 12 DG B N3 1
ATOM 244 C C4 . DG B 1 6 ? 11.431 9.216 25.879 1.00 12.18 ? 12 DG B C4 1
HETATM 245 C C1 . NGU C 2 . ? -7.949 3.531 25.919 1.00 14.34 ? 13 NGU B C1 1
HETATM 246 C C2 . NGU C 2 . ? -7.914 3.647 27.293 1.00 14.49 ? 13 NGU B C2 1
HETATM 247 C C3 . NGU C 2 . ? -7.970 4.905 27.934 1.00 13.95 ? 13 NGU B C3 1
HETATM 248 C C4 . NGU C 2 . ? -8.033 6.033 27.112 1.00 13.42 ? 13 NGU B C4 1
HETATM 249 C C5 . NGU C 2 . ? -8.180 7.176 24.937 1.00 13.47 ? 13 NGU B C5 1
HETATM 250 C C6 . NGU C 2 . ? -8.238 8.254 22.782 1.00 14.52 ? 13 NGU B C6 1
HETATM 251 C C7 . NGU C 2 . ? -8.343 9.692 20.718 1.00 15.71 ? 13 NGU B C7 1
HETATM 252 C C8 . NGU C 2 . ? -8.556 9.537 19.174 1.00 16.13 ? 13 NGU B C8 1
HETATM 253 C C9 . NGU C 2 . ? -7.779 8.327 18.523 1.00 16.06 ? 13 NGU B C9 1
HETATM 254 C C10 . NGU C 2 . ? -8.284 7.055 19.174 1.00 15.90 ? 13 NGU B C10 1
HETATM 255 C C11 . NGU C 2 . ? -8.221 5.813 21.409 1.00 14.81 ? 13 NGU B C11 1
HETATM 256 C C12 . NGU C 2 . ? -8.124 4.593 23.564 1.00 14.01 ? 13 NGU B C12 1
HETATM 257 C C13 . NGU C 2 . ? -6.352 8.518 18.573 1.00 16.24 ? 13 NGU B C13 1
HETATM 258 C C14 . NGU C 2 . ? -9.669 6.714 18.693 1.00 16.33 ? 13 NGU B C14 1
HETATM 259 C C15 . NGU C 2 . ? -11.128 4.896 18.543 1.00 16.47 ? 13 NGU B C15 1
HETATM 260 C C16 . NGU C 2 . ? -8.099 5.938 25.739 1.00 13.72 ? 13 NGU B C16 1
HETATM 261 C C17 . NGU C 2 . ? -8.198 7.123 23.534 1.00 14.08 ? 13 NGU B C17 1
HETATM 262 C C18 . NGU C 2 . ? -8.288 8.304 21.349 1.00 15.28 ? 13 NGU B C18 1
HETATM 263 C C19 . NGU C 2 . ? -8.267 7.048 20.708 1.00 15.33 ? 13 NGU B C19 1
HETATM 264 C C20 . NGU C 2 . ? -8.179 5.854 22.832 1.00 14.15 ? 13 NGU B C20 1
HETATM 265 C C21 . NGU C 2 . ? -8.053 4.652 25.098 1.00 13.84 ? 13 NGU B C21 1
HETATM 266 O O1 . NGU C 2 . ? -7.941 2.389 25.248 1.00 14.79 ? 13 NGU B O1 1
HETATM 267 O O4 . NGU C 2 . ? -8.053 7.169 27.734 1.00 13.40 ? 13 NGU B O4 1
HETATM 268 O O5 . NGU C 2 . ? -8.158 8.256 25.549 1.00 13.66 ? 13 NGU B O5 1
HETATM 269 O O6 . NGU C 2 . ? -8.259 9.469 23.454 1.00 14.23 ? 13 NGU B O6 1
HETATM 270 O O7 . NGU C 2 . ? -7.011 10.247 20.808 1.00 16.72 ? 13 NGU B O7 1
HETATM 271 O O9 . NGU C 2 . ? -8.251 8.308 17.109 1.00 16.30 ? 13 NGU B O9 1
HETATM 272 O O10 . NGU C 2 . ? -9.776 5.358 18.943 1.00 16.79 ? 13 NGU B O10 1
HETATM 273 O O14 . NGU C 2 . ? -10.672 7.310 19.034 1.00 16.31 ? 13 NGU B O14 1
HETATM 274 O O12 . NGU C 2 . ? -8.057 3.517 22.923 1.00 13.81 ? 13 NGU B O12 1
HETATM 275 C "C1'" . NGU C 2 . ? -6.893 11.580 21.199 1.00 17.07 ? 13 NGU B "C1'" 1
HETATM 276 C "C2'" . NGU C 2 . ? -5.425 11.885 21.750 1.00 17.17 ? 13 NGU B "C2'" 1
HETATM 277 C "C3'" . NGU C 2 . ? -4.404 11.919 20.617 1.00 17.23 ? 13 NGU B "C3'" 1
HETATM 278 C "C4'" . NGU C 2 . ? -4.926 12.863 19.495 1.00 17.38 ? 13 NGU B "C4'" 1
HETATM 279 C "C5'" . NGU C 2 . ? -6.267 12.424 19.034 1.00 17.47 ? 13 NGU B "C5'" 1
HETATM 280 C C25 . NGU C 2 . ? -6.887 13.402 17.971 1.00 17.58 ? 13 NGU B C25 1
HETATM 281 C C26 . NGU C 2 . ? -3.770 14.433 18.272 1.00 17.39 ? 13 NGU B C26 1
HETATM 282 C C27 . NGU C 2 . ? -2.128 11.980 21.800 1.00 17.04 ? 13 NGU B C27 1
HETATM 283 C C28 . NGU C 2 . ? -4.172 10.411 20.056 1.00 17.35 ? 13 NGU B C28 1
HETATM 284 C C29 . NGU C 2 . ? -5.217 13.555 23.554 1.00 17.13 ? 13 NGU B C29 1
HETATM 285 O "O1'" . NGU C 2 . ? -7.163 12.606 20.196 1.00 17.49 ? 13 NGU B "O1'" 1
HETATM 286 O "O2'" . NGU C 2 . ? -5.493 13.232 22.201 1.00 17.19 ? 13 NGU B "O2'" 1
HETATM 287 O "O3'" . NGU C 2 . ? -3.275 12.529 21.128 1.00 17.19 ? 13 NGU B "O3'" 1
HETATM 288 O "O4'" . NGU C 2 . ? -4.114 13.027 18.372 1.00 17.31 ? 13 NGU B "O4'" 1
HETATM 289 C C30 . NGU C 2 . ? -7.733 1.122 25.930 1.00 15.50 ? 13 NGU B C30 1
HETATM 290 C C31 . NGU C 2 . ? -6.297 0.742 26.030 1.00 15.74 ? 13 NGU B C31 1
HETATM 291 C C32 . NGU C 2 . ? -5.504 1.706 26.962 1.00 16.05 ? 13 NGU B C32 1
HETATM 292 C C33 . NGU C 2 . ? -6.215 1.947 28.285 1.00 15.58 ? 13 NGU B C33 1
HETATM 293 C C34 . NGU C 2 . ? -7.704 2.323 28.104 1.00 15.23 ? 13 NGU B C34 1
HETATM 294 C C22 . NGU C 2 . ? -8.443 2.211 29.498 1.00 15.08 ? 13 NGU B C22 1
HETATM 295 C C23 . NGU C 2 . ? -3.059 2.227 27.333 1.00 17.24 ? 13 NGU B C23 1
HETATM 296 C C24 . NGU C 2 . ? -3.558 -0.030 26.521 1.00 16.72 ? 13 NGU B C24 1
HETATM 297 N N1 . NGU C 2 . ? -4.097 1.258 27.172 1.00 16.23 ? 13 NGU B N1 1
HETATM 298 O O2 . NGU C 2 . ? -8.341 1.269 27.283 1.00 15.41 ? 13 NGU B O2 1
HETATM 299 O O15 . NGU C 2 . ? -5.627 0.610 24.777 1.00 16.05 ? 13 NGU B O15 1
HETATM 300 O O16 . NGU C 2 . ? -5.479 2.892 29.007 1.00 15.96 ? 13 NGU B O16 1
HETATM 301 O O23 . NGU C 2 . ? -2.010 2.862 27.583 1.00 18.52 ? 13 NGU B O23 1
HETATM 302 C C1 . NGU D 2 . ? 8.069 3.852 23.825 1.00 17.28 ? 14 NGU B C1 1
HETATM 303 C C2 . NGU D 2 . ? 7.951 3.993 22.472 1.00 17.28 ? 14 NGU B C2 1
HETATM 304 C C3 . NGU D 2 . ? 7.970 5.287 21.860 1.00 16.95 ? 14 NGU B C3 1
HETATM 305 C C4 . NGU D 2 . ? 8.064 6.418 22.672 1.00 16.77 ? 14 NGU B C4 1
HETATM 306 C C5 . NGU D 2 . ? 8.237 7.533 24.867 1.00 16.72 ? 14 NGU B C5 1
HETATM 307 C C6 . NGU D 2 . ? 8.342 8.506 27.102 1.00 17.38 ? 14 NGU B C6 1
HETATM 308 C C7 . NGU D 2 . ? 8.464 9.778 29.297 1.00 18.77 ? 14 NGU B C7 1
HETATM 309 C C8 . NGU D 2 . ? 8.789 9.530 30.801 1.00 18.92 ? 14 NGU B C8 1
HETATM 310 C C9 . NGU D 2 . ? 8.096 8.245 31.422 1.00 18.67 ? 14 NGU B C9 1
HETATM 311 C C10 . NGU D 2 . ? 8.585 7.021 30.670 1.00 18.58 ? 14 NGU B C10 1
HETATM 312 C C11 . NGU D 2 . ? 8.345 6.004 28.335 1.00 17.52 ? 14 NGU B C11 1
HETATM 313 C C12 . NGU D 2 . ? 8.247 4.903 26.170 1.00 16.89 ? 14 NGU B C12 1
HETATM 314 C C13 . NGU D 2 . ? 6.677 8.352 31.462 1.00 18.89 ? 14 NGU B C13 1
HETATM 315 C C14 . NGU D 2 . ? 10.036 6.805 31.011 1.00 18.72 ? 14 NGU B C14 1
HETATM 316 C C15 . NGU D 2 . ? 11.282 4.880 31.492 1.00 18.63 ? 14 NGU B C15 1
HETATM 317 C C16 . NGU D 2 . ? 8.159 6.302 24.045 1.00 16.77 ? 14 NGU B C16 1
HETATM 318 C C17 . NGU D 2 . ? 8.291 7.430 26.280 1.00 16.97 ? 14 NGU B C17 1
HETATM 319 C C18 . NGU D 2 . ? 8.438 8.445 28.556 1.00 18.01 ? 14 NGU B C18 1
HETATM 320 C C19 . NGU D 2 . ? 8.431 7.155 29.117 1.00 18.04 ? 14 NGU B C19 1
HETATM 321 C C20 . NGU D 2 . ? 8.316 6.131 26.922 1.00 16.93 ? 14 NGU B C20 1
HETATM 322 C C21 . NGU D 2 . ? 8.146 5.001 24.667 1.00 16.86 ? 14 NGU B C21 1
HETATM 323 O O1 . NGU D 2 . ? 8.068 2.653 24.476 1.00 17.58 ? 14 NGU B O1 1
HETATM 324 O O4 . NGU D 2 . ? 8.091 7.603 22.041 1.00 16.92 ? 14 NGU B O4 1
HETATM 325 O O5 . NGU D 2 . ? 8.186 8.654 24.266 1.00 16.65 ? 14 NGU B O5 1
HETATM 326 O O6 . NGU D 2 . ? 8.318 9.753 26.521 1.00 17.24 ? 14 NGU B O6 1
HETATM 327 O O7 . NGU D 2 . ? 7.077 10.247 29.217 1.00 19.71 ? 14 NGU B O7 1
HETATM 328 O O9 . NGU D 2 . ? 8.649 8.138 32.765 1.00 19.31 ? 14 NGU B O9 1
HETATM 329 O O10 . NGU D 2 . ? 10.278 5.831 31.873 1.00 19.16 ? 14 NGU B O10 1
HETATM 330 O O14 . NGU D 2 . ? 11.026 7.203 30.560 1.00 18.73 ? 14 NGU B O14 1
HETATM 331 O O12 . NGU D 2 . ? 8.278 3.804 26.802 1.00 16.97 ? 14 NGU B O12 1
HETATM 332 C "C1'" . NGU D 2 . ? 6.905 11.573 28.836 1.00 20.57 ? 14 NGU B "C1'" 1
HETATM 333 C "C2'" . NGU D 2 . ? 5.484 11.805 28.185 1.00 20.83 ? 14 NGU B "C2'" 1
HETATM 334 C "C3'" . NGU D 2 . ? 4.381 11.837 29.267 1.00 20.95 ? 14 NGU B "C3'" 1
HETATM 335 C "C4'" . NGU D 2 . ? 4.754 12.915 30.300 1.00 21.21 ? 14 NGU B "C4'" 1
HETATM 336 C "C5'" . NGU D 2 . ? 6.064 12.629 30.891 1.00 21.21 ? 14 NGU B "C5'" 1
HETATM 337 C C25 . NGU D 2 . ? 6.577 13.757 31.853 1.00 21.16 ? 14 NGU B C25 1
HETATM 338 C C26 . NGU D 2 . ? 3.444 13.004 32.354 1.00 21.24 ? 14 NGU B C26 1
HETATM 339 C C27 . NGU D 2 . ? 2.194 11.480 28.054 1.00 20.80 ? 14 NGU B C27 1
HETATM 340 C C28 . NGU D 2 . ? 4.281 10.267 29.768 1.00 20.95 ? 14 NGU B C28 1
HETATM 341 C C29 . NGU D 2 . ? 5.184 13.270 26.220 1.00 20.96 ? 14 NGU B C29 1
HETATM 342 O "O1'" . NGU D 2 . ? 7.128 12.561 29.879 1.00 21.10 ? 14 NGU B "O1'" 1
HETATM 343 O "O2'" . NGU D 2 . ? 5.469 13.109 27.633 1.00 21.02 ? 14 NGU B "O2'" 1
HETATM 344 O "O3'" . NGU D 2 . ? 3.215 12.317 28.676 1.00 21.02 ? 14 NGU B "O3'" 1
HETATM 345 O "O4'" . NGU D 2 . ? 3.809 13.532 31.101 1.00 21.37 ? 14 NGU B "O4'" 1
HETATM 346 C C30 . NGU D 2 . ? 7.832 1.417 23.785 1.00 17.90 ? 14 NGU B C30 1
HETATM 347 C C31 . NGU D 2 . ? 6.380 1.067 23.664 1.00 18.00 ? 14 NGU B C31 1
HETATM 348 C C32 . NGU D 2 . ? 5.636 1.886 22.612 1.00 18.43 ? 14 NGU B C32 1
HETATM 349 C C33 . NGU D 2 . ? 6.407 2.193 21.339 1.00 18.01 ? 14 NGU B C33 1
HETATM 350 C C34 . NGU D 2 . ? 7.834 2.644 21.630 1.00 17.77 ? 14 NGU B C34 1
HETATM 351 C C22 . NGU D 2 . ? 8.682 2.648 20.307 1.00 17.71 ? 14 NGU B C22 1
HETATM 352 C C23 . NGU D 2 . ? 3.166 2.321 22.542 1.00 19.18 ? 14 NGU B C23 1
HETATM 353 C C24 . NGU D 2 . ? 3.927 -0.045 22.261 1.00 18.77 ? 14 NGU B C24 1
HETATM 354 N N1 . NGU D 2 . ? 4.264 1.442 22.231 1.00 18.51 ? 14 NGU B N1 1
HETATM 355 O O2 . NGU D 2 . ? 8.463 1.595 22.421 1.00 17.94 ? 14 NGU B O2 1
HETATM 356 O O15 . NGU D 2 . ? 5.761 1.133 24.957 1.00 18.34 ? 14 NGU B O15 1
HETATM 357 O O16 . NGU D 2 . ? 5.656 3.167 20.697 1.00 18.76 ? 14 NGU B O16 1
HETATM 358 O O23 . NGU D 2 . ? 2.142 2.882 23.003 1.00 19.76 ? 14 NGU B O23 1
HETATM 359 O O . HOH E 3 . ? -1.823 4.564 30.179 1.00 4.03 ? 15 HOH A O 1
HETATM 360 O O . HOH E 3 . ? -2.225 6.393 33.063 1.00 26.59 ? 27 HOH A O 1
HETATM 361 O O . HOH E 3 . ? 4.578 17.261 31.322 1.00 30.61 ? 31 HOH A O 1
HETATM 362 O O . HOH E 3 . ? -9.981 17.993 28.074 1.00 39.38 ? 33 HOH A O 1
HETATM 363 O O . HOH E 3 . ? 5.279 17.479 28.054 1.00 22.29 ? 35 HOH A O 1
HETATM 364 O O . HOH E 3 . ? -0.332 17.775 27.463 1.00 32.08 ? 36 HOH A O 1
HETATM 365 O O . HOH E 3 . ? -5.568 17.443 26.290 1.00 36.63 ? 37 HOH A O 1
HETATM 366 O O . HOH E 3 . ? -4.344 19.527 24.957 1.00 26.74 ? 38 HOH A O 1
HETATM 367 O O . HOH E 3 . ? 13.528 23.144 25.809 1.00 52.74 ? 39 HOH A O 1
HETATM 368 O O . HOH E 3 . ? 7.235 22.423 28.195 1.00 48.22 ? 45 HOH A O 1
HETATM 369 O O . HOH E 3 . ? -8.370 17.154 30.079 1.00 19.70 ? 46 HOH A O 1
HETATM 370 O O . HOH E 3 . ? -3.489 10.215 23.193 1.00 49.52 ? 47 HOH A O 1
HETATM 371 O O . HOH E 3 . ? -5.180 17.996 29.678 1.00 29.41 ? 55 HOH A O 1
HETATM 372 O O . HOH E 3 . ? 3.527 20.127 27.132 1.00 53.72 ? 56 HOH A O 1
HETATM 373 O O . HOH E 3 . ? -6.359 21.265 26.110 1.00 33.75 ? 57 HOH A O 1
HETATM 374 O O . HOH E 3 . ? 0.384 12.959 26.471 1.00 46.92 ? 58 HOH A O 1
HETATM 375 O O . HOH E 3 . ? 2.615 16.583 28.215 1.00 64.90 ? 59 HOH A O 1
HETATM 376 O O . HOH E 3 . ? -7.755 17.750 19.535 1.00 18.42 ? 63 HOH A O 1
HETATM 377 O O . HOH E 3 . ? 14.856 0.478 31.021 1.00 42.98 ? 68 HOH A O 1
HETATM 378 O O . HOH E 3 . ? 0.407 14.715 29.798 1.00 40.73 ? 69 HOH A O 1
HETATM 379 O O . HOH E 3 . ? 11.037 21.620 28.505 1.00 35.47 ? 70 HOH A O 1
HETATM 380 O O . HOH E 3 . ? -2.687 11.657 25.599 1.00 16.14 ? 71 HOH A O 1
HETATM 381 O O . HOH E 3 . ? -11.246 20.030 26.902 1.00 47.42 ? 72 HOH A O 1
HETATM 382 O O . HOH E 3 . ? 0.763 17.843 24.687 1.00 35.63 ? 73 HOH A O 1
HETATM 383 O O . HOH E 3 . ? -6.376 19.661 22.883 1.00 23.43 ? 75 HOH A O 1
HETATM 384 O O . HOH E 3 . ? -9.498 19.295 22.131 1.00 37.47 ? 76 HOH A O 1
HETATM 385 O O . HOH E 3 . ? -10.898 22.215 32.201 1.00 21.81 ? 88 HOH A O 1
HETATM 386 O O . HOH F 3 . ? 13.083 23.590 14.406 1.00 30.29 ? 16 HOH B O 1
HETATM 387 O O . HOH F 3 . ? 15.230 8.597 30.560 1.00 12.43 ? 17 HOH B O 1
HETATM 388 O O . HOH F 3 . ? 5.814 20.926 23.053 1.00 38.67 ? 18 HOH B O 1
HETATM 389 O O . HOH F 3 . ? 8.384 18.239 23.895 1.00 30.16 ? 19 HOH B O 1
HETATM 390 O O . HOH F 3 . ? 25.416 1.283 24.045 1.00 14.21 ? 20 HOH B O 1
HETATM 391 O O . HOH F 3 . ? 2.102 3.995 20.417 1.00 16.27 ? 21 HOH B O 1
HETATM 392 O O . HOH F 3 . ? 11.459 5.619 20.657 1.00 11.09 ? 22 HOH B O 1
HETATM 393 O O . HOH F 3 . ? 11.049 14.665 18.382 1.00 45.02 ? 23 HOH B O 1
HETATM 394 O O . HOH F 3 . ? -0.646 15.193 18.753 1.00 43.88 ? 24 HOH B O 1
HETATM 395 O O . HOH F 3 . ? 14.688 9.087 20.768 1.00 25.56 ? 25 HOH B O 1
HETATM 396 O O . HOH F 3 . ? 15.355 11.653 17.861 1.00 38.45 ? 26 HOH B O 1
HETATM 397 O O . HOH F 3 . ? 0.135 5.865 14.787 1.00 12.99 ? 28 HOH B O 1
HETATM 398 O O . HOH F 3 . ? 18.675 11.052 29.879 1.00 32.25 ? 29 HOH B O 1
HETATM 399 O O . HOH F 3 . ? 14.836 18.899 13.775 1.00 16.42 ? 30 HOH B O 1
HETATM 400 O O . HOH F 3 . ? 9.715 17.304 30.991 1.00 13.62 ? 32 HOH B O 1
HETATM 401 O O . HOH F 3 . ? 11.396 17.158 28.756 1.00 49.67 ? 34 HOH B O 1
HETATM 402 O O . HOH F 3 . ? 11.363 19.299 20.647 1.00 26.55 ? 40 HOH B O 1
HETATM 403 O O . HOH F 3 . ? -3.247 17.045 18.182 1.00 50.64 ? 41 HOH B O 1
HETATM 404 O O . HOH F 3 . ? 11.803 3.158 19.825 1.00 31.17 ? 42 HOH B O 1
HETATM 405 O O . HOH F 3 . ? 13.488 15.655 19.505 1.00 25.14 ? 43 HOH B O 1
HETATM 406 O O . HOH F 3 . ? 6.306 17.966 16.197 1.00 39.42 ? 44 HOH B O 1
HETATM 407 O O . HOH F 3 . ? 8.610 22.298 20.918 1.00 40.64 ? 48 HOH B O 1
HETATM 408 O O . HOH F 3 . ? -2.501 19.192 19.876 1.00 10.94 ? 49 HOH B O 1
HETATM 409 O O . HOH F 3 . ? 17.230 15.243 20.196 1.00 21.46 ? 50 HOH B O 1
HETATM 410 O O . HOH F 3 . ? 14.229 0.580 19.374 1.00 22.35 ? 51 HOH B O 1
HETATM 411 O O . HOH F 3 . ? 8.718 11.910 18.573 1.00 25.37 ? 52 HOH B O 1
HETATM 412 O O . HOH F 3 . ? 23.156 1.986 16.819 1.00 26.08 ? 53 HOH B O 1
HETATM 413 O O . HOH F 3 . ? 4.985 9.385 16.578 1.00 27.04 ? 54 HOH B O 1
HETATM 414 O O . HOH F 3 . ? 11.255 20.578 25.509 1.00 19.68 ? 60 HOH B O 1
HETATM 415 O O . HOH F 3 . ? -3.943 15.102 20.808 1.00 25.92 ? 61 HOH B O 1
HETATM 416 O O . HOH F 3 . ? 14.992 11.234 22.602 1.00 19.23 ? 62 HOH B O 1
HETATM 417 O O . HOH F 3 . ? 11.358 9.171 20.056 1.00 6.54 ? 64 HOH B O 1
HETATM 418 O O . HOH F 3 . ? 1.529 19.233 17.099 1.00 22.56 ? 65 HOH B O 1
HETATM 419 O O . HOH F 3 . ? 10.758 12.977 31.021 1.00 42.76 ? 66 HOH B O 1
HETATM 420 O O . HOH F 3 . ? 11.313 20.382 32.324 1.00 47.54 ? 67 HOH B O 1
HETATM 421 O O . HOH F 3 . ? -0.272 14.039 21.810 1.00 45.23 ? 74 HOH B O 1
HETATM 422 O O . HOH F 3 . ? 0.380 20.960 22.271 1.00 27.35 ? 77 HOH B O 1
HETATM 423 O O . HOH F 3 . ? -2.794 21.934 21.970 1.00 30.50 ? 78 HOH B O 1
HETATM 424 O O . HOH F 3 . ? 0.193 19.404 19.505 1.00 43.83 ? 79 HOH B O 1
HETATM 425 O O . HOH F 3 . ? 10.684 0.118 19.485 1.00 49.79 ? 80 HOH B O 1
HETATM 426 O O . HOH F 3 . ? 3.782 20.437 18.001 1.00 30.55 ? 81 HOH B O 1
HETATM 427 O O . HOH F 3 . ? -0.043 3.274 17.470 1.00 21.50 ? 82 HOH B O 1
HETATM 428 O O . HOH F 3 . ? 21.414 5.435 33.363 1.00 24.16 ? 83 HOH B O 1
HETATM 429 O O . HOH F 3 . ? 6.285 14.877 15.536 1.00 46.16 ? 84 HOH B O 1
HETATM 430 O O . HOH F 3 . ? 9.652 17.841 16.448 1.00 57.11 ? 85 HOH B O 1
HETATM 431 O O . HOH F 3 . ? 14.007 17.786 17.320 1.00 37.29 ? 86 HOH B O 1
HETATM 432 O O . HOH F 3 . ? 12.034 2.707 16.658 1.00 27.45 ? 87 HOH B O 1
HETATM 433 O O . HOH F 3 . ? 7.367 21.806 17.550 1.00 29.93 ? 89 HOH B O 1
#