data_1C9Z
#
_entry.id 1C9Z
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.390
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1C9Z pdb_00001c9z 10.2210/pdb1c9z/pdb
NDB DD0018 ? ?
RCSB RCSB009476 ? ?
WWPDB D_1000009476 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2000-04-02
2 'Structure model' 1 1 2008-04-27
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2011-12-07
5 'Structure model' 1 4 2024-02-07
6 'Structure model' 1 5 2024-04-17
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Database references'
4 5 'Structure model' Advisory
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Database references'
7 5 'Structure model' 'Derived calculations'
8 6 'Structure model' Other
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 5 'Structure model' chem_comp_atom
2 5 'Structure model' chem_comp_bond
3 5 'Structure model' database_2
4 5 'Structure model' pdbx_unobs_or_zero_occ_atoms
5 5 'Structure model' struct_conn
6 5 'Structure model' struct_site
7 6 'Structure model' pdbx_database_status
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_database_2.pdbx_DOI'
2 5 'Structure model' '_database_2.pdbx_database_accession'
3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
4 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
5 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
6 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
7 6 'Structure model' '_pdbx_database_status.status_code_sf'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1C9Z
_pdbx_database_status.recvd_initial_deposition_date 1999-08-03
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.SG_entry .
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 1D32
_pdbx_database_related.details DITERCALINIUM-CGCG
_pdbx_database_related.content_type unspecified
#
_audit_author.name 'Williams, L.D.'
_audit_author.pdbx_ordinal 1
_audit_author.identifier_ORCID ?
#
_citation.id primary
_citation.title
;Effects of cationic charge on three-dimensional structures of intercalative complexes: structure of a bis-intercalated DNA complex solved by MAD phasing.
;
_citation.journal_abbrev Curr.Med.Chem.
_citation.journal_volume 7
_citation.page_first 59
_citation.page_last 71
_citation.year 2000
_citation.journal_id_ASTM ?
_citation.country NE
_citation.journal_id_ISSN 0929-8673
_citation.journal_id_CSD ?
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 10637357
_citation.pdbx_database_id_DOI ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Shui, X.' 1 ?
primary 'Peek, M.E.' 2 ?
primary 'Lipscomb, L.A.' 3 ?
primary 'Gao, Q.' 4 ?
primary 'Ogata, C.' 5 ?
primary 'Roques, B.P.' 6 ?
primary 'Garbay-Jaureguiberry, C.' 7 ?
primary 'Wilkinson, A.P.' 8 ?
primary 'Williams, L.D.' 9 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(*CP*GP*TP*AP*CP*G)-3'" 1809.217 1 ? ? ?
'COMPLEXED WITH BIS-INTERCALATOR D232'
2 non-polymer syn '1,3-DI[[[10-METHOXY-7H-PYRIDO[4,3-C]CARBAZOL-2-IUMYL]-ETHYL]-PIPERIDIN-4-YL]-PROPANE' 761.008 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGTACG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name '1,3-DI[[[10-METHOXY-7H-PYRIDO[4,3-C]CARBAZOL-2-IUMYL]-ETHYL]-PIPERIDIN-4-YL]-PROPANE'
_pdbx_entity_nonpoly.comp_id 232
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DT n
1 4 DA n
1 5 DC n
1 6 DG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details SYNTHETIC
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
232 non-polymer . '1,3-DI[[[10-METHOXY-7H-PYRIDO[4,3-C]CARBAZOL-2-IUMYL]-ETHYL]-PIPERIDIN-4-YL]-PROPANE' 'BIS INTERCALATOR D232'
'C49 H56 N6 O2 2' 761.008
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ?
'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ?
'C10 H15 N2 O8 P' 322.208
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DT 3 3 3 DT T A . n
A 1 4 DA 4 4 4 DA A A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DG 6 6 6 DG G A . n
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id 232
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 7
_pdbx_nonpoly_scheme.auth_seq_num 7
_pdbx_nonpoly_scheme.pdb_mon_id 232
_pdbx_nonpoly_scheme.auth_mon_id 232
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
_software.date
_software.type
_software.location
_software.language
MADSYS phasing . ? 1 ? ? ? ?
X-PLOR refinement 3.851 ? 2 ? ? ? ?
SDMS 'data reduction' . ? 3 ? ? ? ?
SDMS 'data scaling' . ? 4 ? ? ? ?
#
_cell.entry_id 1C9Z
_cell.length_a 28.240
_cell.length_b 28.240
_cell.length_c 72.744
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 1C9Z
_symmetry.space_group_name_H-M 'P 65 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting hexagonal
_symmetry.Int_Tables_number 179
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 1C9Z
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 44.50
_exptl_crystal.density_Matthews 2.22
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 300
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.0
_exptl_crystal_grow.pdbx_details
'MPD, SPERMINE, MAGNESIUM CHLORIDE, SODIUM CACODYLATE, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 300K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 SPERMINE ? ? ?
1 2 1 MGCL2 ? ? ?
1 3 1 'SODIUM CACODYLATE' ? ? ?
1 4 1 MPD ? ? ?
1 5 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 300
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'AREA DETECTOR'
_diffrn_detector.type 'UCSD MARK II'
_diffrn_detector.pdbx_collection_date 1995-09-09
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1C9Z
_reflns.observed_criterion_sigma_I 4.0
_reflns.observed_criterion_sigma_F 2.0
_reflns.d_resolution_low 10.0
_reflns.d_resolution_high 2.4
_reflns.number_obs 4698
_reflns.number_all 5220
_reflns.percent_possible_obs 91
_reflns.pdbx_Rmerge_I_obs 0.0510000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 9.2
_reflns.B_iso_Wilson_estimate 21
_reflns.pdbx_redundancy 3.2
_reflns.R_free_details ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_CC_star ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_Rrim_I_all ?
#
_reflns_shell.d_res_high 2.4
_reflns_shell.d_res_low 2.51
_reflns_shell.percent_possible_all 84
_reflns_shell.Rmerge_I_obs 0.0600000
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy 4.2
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_CC_star ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_Rrim_I_all ?
#
_refine.entry_id 1C9Z
_refine.ls_number_reflns_obs 4682
_refine.ls_number_reflns_all 5220
_refine.pdbx_ls_sigma_I 2.
_refine.pdbx_ls_sigma_F 4.
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 10
_refine.ls_d_res_high 2.4
_refine.ls_percent_reflns_obs 90
_refine.ls_R_factor_obs 0.1961000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.1961000
_refine.ls_R_factor_R_free 0.1961000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free 99
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'PARKINSON ET AL.'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_phase_error ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 120
_refine_hist.pdbx_number_atoms_ligand 29
_refine_hist.number_atoms_solvent 0
_refine_hist.number_atoms_total 149
_refine_hist.d_res_high 2.4
_refine_hist.d_res_low 10
#
_database_PDB_matrix.entry_id 1C9Z
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1C9Z
_struct.title D232-CGTACG
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1C9Z
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA, INTERCALATOR, INTERCALATION, DRUG, MAJOR GROOVE'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1C9Z
_struct_ref.pdbx_db_accession 1C9Z
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1C9Z
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 1C9Z
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 11_556 -x+y,y,-z+3/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 109.1160000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale none ? B 232 . C27 ? ? ? 1_555 B 232 . C28 ? ? A 232 7 A 232 7 11_556 ? ? ? ? ? ? ? 1.533 ? ?
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 1 A DG 6 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 1 A DG 6 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 1 A DG 6 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 3 A DA 4 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 3 A DA 4 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 3 N3 ? ? A DA 4 A DT 3 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 3 O4 ? ? A DA 4 A DT 3 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 6 A DC 1 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 6 A DC 1 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 6 A DC 1 11_556 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A 232 7 ? 7 'BINDING SITE FOR RESIDUE 232 A 7'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 7 DC A 1 ? DC A 1 . ? 1_555 ?
2 AC1 7 DG A 2 ? DG A 2 . ? 1_555 ?
3 AC1 7 DT A 3 ? DT A 3 . ? 1_555 ?
4 AC1 7 DA A 4 ? DA A 4 . ? 5_565 ?
5 AC1 7 DC A 5 ? DC A 5 . ? 11_556 ?
6 AC1 7 DG A 6 ? DG A 6 . ? 11_556 ?
7 AC1 7 DG A 6 ? DG A 6 . ? 5_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.555 1.512 0.043 0.007 N
2 1 "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 1.457 1.521 -0.064 0.010 N
3 1 C6 A DA 4 ? ? N1 A DA 4 ? ? 1.306 1.351 -0.045 0.007 N
4 1 N9 A DA 4 ? ? C4 A DA 4 ? ? 1.330 1.374 -0.044 0.006 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 101.42 109.40 -7.98 0.80 N
2 1 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 110.38 106.00 4.38 0.60 N
3 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? "C2'" A DT 3 ? ? 100.59 105.90 -5.31 0.80 N
4 1 N3 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 117.57 122.30 -4.73 0.60 N
5 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 102.07 108.00 -5.93 0.70 N
6 1 N1 A DA 4 ? ? C2 A DA 4 ? ? N3 A DA 4 ? ? 132.89 129.30 3.59 0.50 N
7 1 C2 A DA 4 ? ? N3 A DA 4 ? ? C4 A DA 4 ? ? 105.91 110.60 -4.69 0.50 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text BIS-INTERCALATION
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id 232
_pdbx_struct_special_symmetry.auth_seq_id 7
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id B
_pdbx_struct_special_symmetry.label_comp_id 232
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
232 C1 C Y N 1
232 N2 N Y N 2
232 C3 C Y N 3
232 C4 C Y N 4
232 C5 C Y N 5
232 C6 C Y N 6
232 N7 N Y N 7
232 C8 C Y N 8
232 C9 C Y N 9
232 C11 C Y N 10
232 C12 C Y N 11
232 C13 C Y N 12
232 C14 C Y N 13
232 C15 C Y N 14
232 C16 C Y N 15
232 C17 C Y N 16
232 C19 C N N 17
232 C10 C Y N 18
232 O10 O N N 19
232 C18 C N N 20
232 C20 C N N 21
232 N21 N N N 22
232 C22 C N N 23
232 C23 C N N 24
232 C24 C N N 25
232 C25 C N N 26
232 C26 C N N 27
232 C27 C N N 28
232 C28 C N N 29
232 "C1'" C Y N 30
232 "N2'" N Y N 31
232 "C3'" C Y N 32
232 "C4'" C Y N 33
232 "C5'" C Y N 34
232 "C6'" C Y N 35
232 "N7'" N Y N 36
232 "C8'" C Y N 37
232 "C9'" C Y N 38
232 "CB'" C Y N 39
232 "CC'" C Y N 40
232 "CD'" C Y N 41
232 "CE'" C Y N 42
232 "CF'" C Y N 43
232 "CG'" C Y N 44
232 "CH'" C Y N 45
232 "CJ'" C N N 46
232 "CA'" C Y N 47
232 "OA'" O N N 48
232 "CI'" C N N 49
232 "CK'" C N N 50
232 "NL'" N N N 51
232 "CM'" C N N 52
232 "CN'" C N N 53
232 "CO'" C N N 54
232 "CP'" C N N 55
232 "CQ'" C N N 56
232 "CR'" C N N 57
232 H1 H N N 58
232 H3 H N N 59
232 H4 H N N 60
232 H5 H N N 61
232 H6 H N N 62
232 H7 H N N 63
232 H8 H N N 64
232 H9 H N N 65
232 H11 H N N 66
232 H191 H N N 67
232 H192 H N N 68
232 H181 H N N 69
232 H182 H N N 70
232 H183 H N N 71
232 H201 H N N 72
232 H202 H N N 73
232 H221 H N N 74
232 H222 H N N 75
232 H231 H N N 76
232 H232 H N N 77
232 H24 H N N 78
232 H251 H N N 79
232 H252 H N N 80
232 H261 H N N 81
232 H262 H N N 82
232 H271 H N N 83
232 H272 H N N 84
232 H281 H N N 85
232 H282 H N N 86
232 "H1'" H N N 87
232 "H3'" H N N 88
232 "H4'" H N N 89
232 "H5'" H N N 90
232 "H6'" H N N 91
232 "H7'" H N N 92
232 "H8'" H N N 93
232 "H9'" H N N 94
232 "H11'" H N N 95
232 H193 H N N 96
232 H194 H N N 97
232 H184 H N N 98
232 H185 H N N 99
232 H186 H N N 100
232 H203 H N N 101
232 H204 H N N 102
232 H223 H N N 103
232 H224 H N N 104
232 H233 H N N 105
232 H234 H N N 106
232 "H24'" H N N 107
232 H253 H N N 108
232 H254 H N N 109
232 H263 H N N 110
232 H264 H N N 111
232 H273 H N N 112
232 H274 H N N 113
DA OP3 O N N 114
DA P P N N 115
DA OP1 O N N 116
DA OP2 O N N 117
DA "O5'" O N N 118
DA "C5'" C N N 119
DA "C4'" C N R 120
DA "O4'" O N N 121
DA "C3'" C N S 122
DA "O3'" O N N 123
DA "C2'" C N N 124
DA "C1'" C N R 125
DA N9 N Y N 126
DA C8 C Y N 127
DA N7 N Y N 128
DA C5 C Y N 129
DA C6 C Y N 130
DA N6 N N N 131
DA N1 N Y N 132
DA C2 C Y N 133
DA N3 N Y N 134
DA C4 C Y N 135
DA HOP3 H N N 136
DA HOP2 H N N 137
DA "H5'" H N N 138
DA "H5''" H N N 139
DA "H4'" H N N 140
DA "H3'" H N N 141
DA "HO3'" H N N 142
DA "H2'" H N N 143
DA "H2''" H N N 144
DA "H1'" H N N 145
DA H8 H N N 146
DA H61 H N N 147
DA H62 H N N 148
DA H2 H N N 149
DC OP3 O N N 150
DC P P N N 151
DC OP1 O N N 152
DC OP2 O N N 153
DC "O5'" O N N 154
DC "C5'" C N N 155
DC "C4'" C N R 156
DC "O4'" O N N 157
DC "C3'" C N S 158
DC "O3'" O N N 159
DC "C2'" C N N 160
DC "C1'" C N R 161
DC N1 N N N 162
DC C2 C N N 163
DC O2 O N N 164
DC N3 N N N 165
DC C4 C N N 166
DC N4 N N N 167
DC C5 C N N 168
DC C6 C N N 169
DC HOP3 H N N 170
DC HOP2 H N N 171
DC "H5'" H N N 172
DC "H5''" H N N 173
DC "H4'" H N N 174
DC "H3'" H N N 175
DC "HO3'" H N N 176
DC "H2'" H N N 177
DC "H2''" H N N 178
DC "H1'" H N N 179
DC H41 H N N 180
DC H42 H N N 181
DC H5 H N N 182
DC H6 H N N 183
DG OP3 O N N 184
DG P P N N 185
DG OP1 O N N 186
DG OP2 O N N 187
DG "O5'" O N N 188
DG "C5'" C N N 189
DG "C4'" C N R 190
DG "O4'" O N N 191
DG "C3'" C N S 192
DG "O3'" O N N 193
DG "C2'" C N N 194
DG "C1'" C N R 195
DG N9 N Y N 196
DG C8 C Y N 197
DG N7 N Y N 198
DG C5 C Y N 199
DG C6 C N N 200
DG O6 O N N 201
DG N1 N N N 202
DG C2 C N N 203
DG N2 N N N 204
DG N3 N N N 205
DG C4 C Y N 206
DG HOP3 H N N 207
DG HOP2 H N N 208
DG "H5'" H N N 209
DG "H5''" H N N 210
DG "H4'" H N N 211
DG "H3'" H N N 212
DG "HO3'" H N N 213
DG "H2'" H N N 214
DG "H2''" H N N 215
DG "H1'" H N N 216
DG H8 H N N 217
DG H1 H N N 218
DG H21 H N N 219
DG H22 H N N 220
DT OP3 O N N 221
DT P P N N 222
DT OP1 O N N 223
DT OP2 O N N 224
DT "O5'" O N N 225
DT "C5'" C N N 226
DT "C4'" C N R 227
DT "O4'" O N N 228
DT "C3'" C N S 229
DT "O3'" O N N 230
DT "C2'" C N N 231
DT "C1'" C N R 232
DT N1 N N N 233
DT C2 C N N 234
DT O2 O N N 235
DT N3 N N N 236
DT C4 C N N 237
DT O4 O N N 238
DT C5 C N N 239
DT C7 C N N 240
DT C6 C N N 241
DT HOP3 H N N 242
DT HOP2 H N N 243
DT "H5'" H N N 244
DT "H5''" H N N 245
DT "H4'" H N N 246
DT "H3'" H N N 247
DT "HO3'" H N N 248
DT "H2'" H N N 249
DT "H2''" H N N 250
DT "H1'" H N N 251
DT H3 H N N 252
DT H71 H N N 253
DT H72 H N N 254
DT H73 H N N 255
DT H6 H N N 256
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
232 C1 N2 doub Y N 1
232 C1 C17 sing Y N 2
232 C1 H1 sing N N 3
232 N2 C3 sing Y N 4
232 N2 C19 sing N N 5
232 C3 C4 doub Y N 6
232 C3 H3 sing N N 7
232 C4 C12 sing Y N 8
232 C4 H4 sing N N 9
232 C5 C6 doub Y N 10
232 C5 C12 sing Y N 11
232 C5 H5 sing N N 12
232 C6 C13 sing Y N 13
232 C6 H6 sing N N 14
232 N7 C13 sing Y N 15
232 N7 C14 sing Y N 16
232 N7 H7 sing N N 17
232 C8 C9 doub Y N 18
232 C8 C14 sing Y N 19
232 C8 H8 sing N N 20
232 C9 C10 sing Y N 21
232 C9 H9 sing N N 22
232 C11 C15 sing Y N 23
232 C11 C10 doub Y N 24
232 C11 H11 sing N N 25
232 C12 C17 doub Y N 26
232 C13 C16 doub Y N 27
232 C14 C15 doub Y N 28
232 C15 C16 sing Y N 29
232 C16 C17 sing Y N 30
232 C19 C20 sing N N 31
232 C19 H191 sing N N 32
232 C19 H192 sing N N 33
232 C10 O10 sing N N 34
232 O10 C18 sing N N 35
232 C18 H181 sing N N 36
232 C18 H182 sing N N 37
232 C18 H183 sing N N 38
232 C20 N21 sing N N 39
232 C20 H201 sing N N 40
232 C20 H202 sing N N 41
232 N21 C22 sing N N 42
232 N21 C26 sing N N 43
232 C22 C23 sing N N 44
232 C22 H221 sing N N 45
232 C22 H222 sing N N 46
232 C23 C24 sing N N 47
232 C23 H231 sing N N 48
232 C23 H232 sing N N 49
232 C24 C25 sing N N 50
232 C24 C27 sing N N 51
232 C24 H24 sing N N 52
232 C25 C26 sing N N 53
232 C25 H251 sing N N 54
232 C25 H252 sing N N 55
232 C26 H261 sing N N 56
232 C26 H262 sing N N 57
232 C27 C28 sing N N 58
232 C27 H271 sing N N 59
232 C27 H272 sing N N 60
232 C28 "CR'" sing N N 61
232 C28 H281 sing N N 62
232 C28 H282 sing N N 63
232 "C1'" "N2'" doub Y N 64
232 "C1'" "CH'" sing Y N 65
232 "C1'" "H1'" sing N N 66
232 "N2'" "C3'" sing Y N 67
232 "N2'" "CJ'" sing N N 68
232 "C3'" "C4'" doub Y N 69
232 "C3'" "H3'" sing N N 70
232 "C4'" "CC'" sing Y N 71
232 "C4'" "H4'" sing N N 72
232 "C5'" "C6'" doub Y N 73
232 "C5'" "CC'" sing Y N 74
232 "C5'" "H5'" sing N N 75
232 "C6'" "CD'" sing Y N 76
232 "C6'" "H6'" sing N N 77
232 "N7'" "CD'" sing Y N 78
232 "N7'" "CE'" sing Y N 79
232 "N7'" "H7'" sing N N 80
232 "C8'" "C9'" doub Y N 81
232 "C8'" "CE'" sing Y N 82
232 "C8'" "H8'" sing N N 83
232 "C9'" "CA'" sing Y N 84
232 "C9'" "H9'" sing N N 85
232 "CB'" "CF'" sing Y N 86
232 "CB'" "CA'" doub Y N 87
232 "CB'" "H11'" sing N N 88
232 "CC'" "CH'" doub Y N 89
232 "CD'" "CG'" doub Y N 90
232 "CE'" "CF'" doub Y N 91
232 "CF'" "CG'" sing Y N 92
232 "CG'" "CH'" sing Y N 93
232 "CJ'" "CK'" sing N N 94
232 "CJ'" H193 sing N N 95
232 "CJ'" H194 sing N N 96
232 "CA'" "OA'" sing N N 97
232 "OA'" "CI'" sing N N 98
232 "CI'" H184 sing N N 99
232 "CI'" H185 sing N N 100
232 "CI'" H186 sing N N 101
232 "CK'" "NL'" sing N N 102
232 "CK'" H203 sing N N 103
232 "CK'" H204 sing N N 104
232 "NL'" "CM'" sing N N 105
232 "NL'" "CQ'" sing N N 106
232 "CM'" "CN'" sing N N 107
232 "CM'" H223 sing N N 108
232 "CM'" H224 sing N N 109
232 "CN'" "CO'" sing N N 110
232 "CN'" H233 sing N N 111
232 "CN'" H234 sing N N 112
232 "CO'" "CP'" sing N N 113
232 "CO'" "CR'" sing N N 114
232 "CO'" "H24'" sing N N 115
232 "CP'" "CQ'" sing N N 116
232 "CP'" H253 sing N N 117
232 "CP'" H254 sing N N 118
232 "CQ'" H263 sing N N 119
232 "CQ'" H264 sing N N 120
232 "CR'" H273 sing N N 121
232 "CR'" H274 sing N N 122
DA OP3 P sing N N 123
DA OP3 HOP3 sing N N 124
DA P OP1 doub N N 125
DA P OP2 sing N N 126
DA P "O5'" sing N N 127
DA OP2 HOP2 sing N N 128
DA "O5'" "C5'" sing N N 129
DA "C5'" "C4'" sing N N 130
DA "C5'" "H5'" sing N N 131
DA "C5'" "H5''" sing N N 132
DA "C4'" "O4'" sing N N 133
DA "C4'" "C3'" sing N N 134
DA "C4'" "H4'" sing N N 135
DA "O4'" "C1'" sing N N 136
DA "C3'" "O3'" sing N N 137
DA "C3'" "C2'" sing N N 138
DA "C3'" "H3'" sing N N 139
DA "O3'" "HO3'" sing N N 140
DA "C2'" "C1'" sing N N 141
DA "C2'" "H2'" sing N N 142
DA "C2'" "H2''" sing N N 143
DA "C1'" N9 sing N N 144
DA "C1'" "H1'" sing N N 145
DA N9 C8 sing Y N 146
DA N9 C4 sing Y N 147
DA C8 N7 doub Y N 148
DA C8 H8 sing N N 149
DA N7 C5 sing Y N 150
DA C5 C6 sing Y N 151
DA C5 C4 doub Y N 152
DA C6 N6 sing N N 153
DA C6 N1 doub Y N 154
DA N6 H61 sing N N 155
DA N6 H62 sing N N 156
DA N1 C2 sing Y N 157
DA C2 N3 doub Y N 158
DA C2 H2 sing N N 159
DA N3 C4 sing Y N 160
DC OP3 P sing N N 161
DC OP3 HOP3 sing N N 162
DC P OP1 doub N N 163
DC P OP2 sing N N 164
DC P "O5'" sing N N 165
DC OP2 HOP2 sing N N 166
DC "O5'" "C5'" sing N N 167
DC "C5'" "C4'" sing N N 168
DC "C5'" "H5'" sing N N 169
DC "C5'" "H5''" sing N N 170
DC "C4'" "O4'" sing N N 171
DC "C4'" "C3'" sing N N 172
DC "C4'" "H4'" sing N N 173
DC "O4'" "C1'" sing N N 174
DC "C3'" "O3'" sing N N 175
DC "C3'" "C2'" sing N N 176
DC "C3'" "H3'" sing N N 177
DC "O3'" "HO3'" sing N N 178
DC "C2'" "C1'" sing N N 179
DC "C2'" "H2'" sing N N 180
DC "C2'" "H2''" sing N N 181
DC "C1'" N1 sing N N 182
DC "C1'" "H1'" sing N N 183
DC N1 C2 sing N N 184
DC N1 C6 sing N N 185
DC C2 O2 doub N N 186
DC C2 N3 sing N N 187
DC N3 C4 doub N N 188
DC C4 N4 sing N N 189
DC C4 C5 sing N N 190
DC N4 H41 sing N N 191
DC N4 H42 sing N N 192
DC C5 C6 doub N N 193
DC C5 H5 sing N N 194
DC C6 H6 sing N N 195
DG OP3 P sing N N 196
DG OP3 HOP3 sing N N 197
DG P OP1 doub N N 198
DG P OP2 sing N N 199
DG P "O5'" sing N N 200
DG OP2 HOP2 sing N N 201
DG "O5'" "C5'" sing N N 202
DG "C5'" "C4'" sing N N 203
DG "C5'" "H5'" sing N N 204
DG "C5'" "H5''" sing N N 205
DG "C4'" "O4'" sing N N 206
DG "C4'" "C3'" sing N N 207
DG "C4'" "H4'" sing N N 208
DG "O4'" "C1'" sing N N 209
DG "C3'" "O3'" sing N N 210
DG "C3'" "C2'" sing N N 211
DG "C3'" "H3'" sing N N 212
DG "O3'" "HO3'" sing N N 213
DG "C2'" "C1'" sing N N 214
DG "C2'" "H2'" sing N N 215
DG "C2'" "H2''" sing N N 216
DG "C1'" N9 sing N N 217
DG "C1'" "H1'" sing N N 218
DG N9 C8 sing Y N 219
DG N9 C4 sing Y N 220
DG C8 N7 doub Y N 221
DG C8 H8 sing N N 222
DG N7 C5 sing Y N 223
DG C5 C6 sing N N 224
DG C5 C4 doub Y N 225
DG C6 O6 doub N N 226
DG C6 N1 sing N N 227
DG N1 C2 sing N N 228
DG N1 H1 sing N N 229
DG C2 N2 sing N N 230
DG C2 N3 doub N N 231
DG N2 H21 sing N N 232
DG N2 H22 sing N N 233
DG N3 C4 sing N N 234
DT OP3 P sing N N 235
DT OP3 HOP3 sing N N 236
DT P OP1 doub N N 237
DT P OP2 sing N N 238
DT P "O5'" sing N N 239
DT OP2 HOP2 sing N N 240
DT "O5'" "C5'" sing N N 241
DT "C5'" "C4'" sing N N 242
DT "C5'" "H5'" sing N N 243
DT "C5'" "H5''" sing N N 244
DT "C4'" "O4'" sing N N 245
DT "C4'" "C3'" sing N N 246
DT "C4'" "H4'" sing N N 247
DT "O4'" "C1'" sing N N 248
DT "C3'" "O3'" sing N N 249
DT "C3'" "C2'" sing N N 250
DT "C3'" "H3'" sing N N 251
DT "O3'" "HO3'" sing N N 252
DT "C2'" "C1'" sing N N 253
DT "C2'" "H2'" sing N N 254
DT "C2'" "H2''" sing N N 255
DT "C1'" N1 sing N N 256
DT "C1'" "H1'" sing N N 257
DT N1 C2 sing N N 258
DT N1 C6 sing N N 259
DT C2 O2 doub N N 260
DT C2 N3 sing N N 261
DT N3 C4 sing N N 262
DT N3 H3 sing N N 263
DT C4 O4 doub N N 264
DT C4 C5 sing N N 265
DT C5 C7 sing N N 266
DT C5 C6 doub N N 267
DT C7 H71 sing N N 268
DT C7 H72 sing N N 269
DT C7 H73 sing N N 270
DT C6 H6 sing N N 271
#
_ndb_struct_conf_na.entry_id 1C9Z
_ndb_struct_conf_na.feature 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 A DG 6 11_556 0.589 -0.378 0.685 -6.552 -6.046 0.943 1 A_DC1:DG6_A A 1 ? A 6 ? 19 1
1 A DG 2 1_555 A DC 5 11_556 -0.252 -0.473 0.131 -6.426 -2.145 -4.641 2 A_DG2:DC5_A A 2 ? A 5 ? 19 1
1 A DT 3 1_555 A DA 4 11_556 0.246 -0.121 -0.145 4.780 -10.356 -9.422 3 A_DT3:DA4_A A 3 ? A 4 ? 20 1
1 A DA 4 1_555 A DT 3 11_556 -0.246 -0.121 -0.145 -4.780 -10.356 -9.422 4 A_DA4:DT3_A A 4 ? A 3 ? 20 1
1 A DC 5 1_555 A DG 2 11_556 0.252 -0.473 0.131 6.426 -2.145 -4.641 5 A_DC5:DG2_A A 5 ? A 2 ? 19 1
1 A DG 6 1_555 A DC 1 11_556 -0.589 -0.378 0.685 6.553 -6.046 0.943 6 A_DG6:DC1_A A 6 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 A DG 6 11_556 A DG 2 1_555 A DC 5 11_556 0.078 -0.098 6.815 5.112 0.734 13.460 -1.768 9.295 6.390 2.991
-20.833 14.413 1 AA_DC1DG2:DC5DG6_AA A 1 ? A 6 ? A 2 ? A 5 ?
1 A DG 2 1_555 A DC 5 11_556 A DT 3 1_555 A DA 4 11_556 -0.633 -0.218 3.156 1.495 -0.333 34.875 -0.315 1.273 3.129 -0.555 -2.493
34.907 2 AA_DG2DT3:DA4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ?
1 A DT 3 1_555 A DA 4 11_556 A DA 4 1_555 A DT 3 11_556 0.000 0.747 3.597 0.000 9.645 37.326 -0.218 0.000 3.671 14.770 0.000
38.509 3 AA_DT3DA4:DT3DA4_AA A 3 ? A 4 ? A 4 ? A 3 ?
1 A DA 4 1_555 A DT 3 11_556 A DC 5 1_555 A DG 2 11_556 0.633 -0.218 3.156 -1.495 -0.333 34.875 -0.315 -1.273 3.129 -0.555 2.493
34.907 4 AA_DA4DC5:DG2DT3_AA A 4 ? A 3 ? A 5 ? A 2 ?
1 A DC 5 1_555 A DG 2 11_556 A DG 6 1_555 A DC 1 11_556 -0.078 -0.098 6.815 -5.112 0.734 13.460 -1.768 -9.294 6.390 2.991 20.833
14.413 5 AA_DC5DG6:DC1DG2_AA A 5 ? A 2 ? A 6 ? A 1 ?
#
_atom_sites.entry_id 1C9Z
_atom_sites.fract_transf_matrix[1][1] 0.035411
_atom_sites.fract_transf_matrix[1][2] 0.020444
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.040889
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.013747
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 7.683 22.188 63.548 1.00 66.53 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 9.095 22.153 63.263 1.00 64.16 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 9.626 20.740 62.890 1.00 59.37 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 9.367 19.792 63.927 1.00 50.31 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 8.968 20.177 61.632 1.00 57.26 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 9.703 20.657 60.506 1.00 60.41 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 9.175 18.702 61.842 1.00 51.81 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 9.039 18.548 63.323 1.00 40.87 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 7.709 18.251 63.794 1.00 26.40 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 7.379 16.946 63.890 1.00 26.44 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 8.142 16.059 63.534 1.00 26.37 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 6.167 16.642 64.393 1.00 27.59 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 5.318 17.591 64.793 1.00 24.18 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 4.125 17.238 65.265 1.00 22.36 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 5.659 18.958 64.694 1.00 26.98 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 6.881 19.227 64.213 1.00 23.65 ? 1 DC A C6 1
ATOM 17 P P . DG A 1 2 ? 9.055 21.120 59.105 1.00 54.90 ? 2 DG A P 1
ATOM 18 O OP1 . DG A 1 2 ? 10.215 21.596 58.287 1.00 49.83 ? 2 DG A OP1 1
ATOM 19 O OP2 . DG A 1 2 ? 7.813 21.935 59.309 1.00 44.46 ? 2 DG A OP2 1
ATOM 20 O "O5'" . DG A 1 2 ? 8.564 19.732 58.633 1.00 47.74 ? 2 DG A "O5'" 1
ATOM 21 C "C5'" . DG A 1 2 ? 7.979 19.753 57.385 1.00 39.21 ? 2 DG A "C5'" 1
ATOM 22 C "C4'" . DG A 1 2 ? 8.283 18.424 56.904 1.00 31.31 ? 2 DG A "C4'" 1
ATOM 23 O "O4'" . DG A 1 2 ? 7.433 17.495 57.568 1.00 29.54 ? 2 DG A "O4'" 1
ATOM 24 C "C3'" . DG A 1 2 ? 8.001 18.438 55.475 1.00 30.04 ? 2 DG A "C3'" 1
ATOM 25 O "O3'" . DG A 1 2 ? 8.918 17.524 54.928 1.00 33.42 ? 2 DG A "O3'" 1
ATOM 26 C "C2'" . DG A 1 2 ? 6.566 18.011 55.467 1.00 26.87 ? 2 DG A "C2'" 1
ATOM 27 C "C1'" . DG A 1 2 ? 6.434 17.090 56.636 1.00 24.35 ? 2 DG A "C1'" 1
ATOM 28 N N9 . DG A 1 2 ? 5.128 17.185 57.299 1.00 17.51 ? 2 DG A N9 1
ATOM 29 C C8 . DG A 1 2 ? 4.361 18.261 57.651 1.00 12.82 ? 2 DG A C8 1
ATOM 30 N N7 . DG A 1 2 ? 3.233 17.909 58.245 1.00 19.11 ? 2 DG A N7 1
ATOM 31 C C5 . DG A 1 2 ? 3.270 16.531 58.259 1.00 5.53 ? 2 DG A C5 1
ATOM 32 C C6 . DG A 1 2 ? 2.392 15.621 58.771 1.00 10.08 ? 2 DG A C6 1
ATOM 33 O O6 . DG A 1 2 ? 1.355 15.802 59.366 1.00 19.86 ? 2 DG A O6 1
ATOM 34 N N1 . DG A 1 2 ? 2.826 14.356 58.592 1.00 13.68 ? 2 DG A N1 1
ATOM 35 C C2 . DG A 1 2 ? 3.980 14.009 57.984 1.00 11.08 ? 2 DG A C2 1
ATOM 36 N N2 . DG A 1 2 ? 4.258 12.738 57.873 1.00 18.36 ? 2 DG A N2 1
ATOM 37 N N3 . DG A 1 2 ? 4.846 14.847 57.506 1.00 14.79 ? 2 DG A N3 1
ATOM 38 C C4 . DG A 1 2 ? 4.427 16.093 57.701 1.00 11.66 ? 2 DG A C4 1
ATOM 39 P P . DT A 1 3 ? 9.035 17.322 53.366 1.00 27.55 ? 3 DT A P 1
ATOM 40 O OP1 . DT A 1 3 ? 10.456 17.017 53.078 1.00 33.57 ? 3 DT A OP1 1
ATOM 41 O OP2 . DT A 1 3 ? 8.302 18.428 52.715 1.00 28.25 ? 3 DT A OP2 1
ATOM 42 O "O5'" . DT A 1 3 ? 8.218 15.996 53.065 1.00 27.19 ? 3 DT A "O5'" 1
ATOM 43 C "C5'" . DT A 1 3 ? 8.827 14.781 53.503 1.00 23.94 ? 3 DT A "C5'" 1
ATOM 44 C "C4'" . DT A 1 3 ? 7.874 13.633 53.437 1.00 22.72 ? 3 DT A "C4'" 1
ATOM 45 O "O4'" . DT A 1 3 ? 6.656 13.936 54.116 1.00 24.92 ? 3 DT A "O4'" 1
ATOM 46 C "C3'" . DT A 1 3 ? 7.540 13.387 52.013 1.00 23.69 ? 3 DT A "C3'" 1
ATOM 47 O "O3'" . DT A 1 3 ? 7.933 12.041 51.754 1.00 24.14 ? 3 DT A "O3'" 1
ATOM 48 C "C2'" . DT A 1 3 ? 6.063 13.748 51.973 1.00 24.38 ? 3 DT A "C2'" 1
ATOM 49 C "C1'" . DT A 1 3 ? 5.570 13.473 53.360 1.00 18.44 ? 3 DT A "C1'" 1
ATOM 50 N N1 . DT A 1 3 ? 4.432 14.275 53.849 1.00 16.06 ? 3 DT A N1 1
ATOM 51 C C2 . DT A 1 3 ? 3.493 13.625 54.580 1.00 10.33 ? 3 DT A C2 1
ATOM 52 O O2 . DT A 1 3 ? 3.504 12.435 54.818 1.00 21.65 ? 3 DT A O2 1
ATOM 53 N N3 . DT A 1 3 ? 2.480 14.341 55.064 1.00 19.03 ? 3 DT A N3 1
ATOM 54 C C4 . DT A 1 3 ? 2.311 15.662 54.875 1.00 18.77 ? 3 DT A C4 1
ATOM 55 O O4 . DT A 1 3 ? 1.351 16.188 55.391 1.00 24.63 ? 3 DT A O4 1
ATOM 56 C C5 . DT A 1 3 ? 3.310 16.304 54.099 1.00 16.29 ? 3 DT A C5 1
ATOM 57 C C7 . DT A 1 3 ? 3.203 17.777 53.828 1.00 15.86 ? 3 DT A C7 1
ATOM 58 C C6 . DT A 1 3 ? 4.343 15.608 53.641 1.00 13.61 ? 3 DT A C6 1
ATOM 59 P P . DA A 1 4 ? 7.767 11.360 50.341 1.00 30.41 ? 4 DA A P 1
ATOM 60 O OP1 . DA A 1 4 ? 8.821 10.338 50.257 1.00 33.14 ? 4 DA A OP1 1
ATOM 61 O OP2 . DA A 1 4 ? 7.605 12.412 49.307 1.00 26.97 ? 4 DA A OP2 1
ATOM 62 O "O5'" . DA A 1 4 ? 6.409 10.554 50.464 1.00 24.37 ? 4 DA A "O5'" 1
ATOM 63 C "C5'" . DA A 1 4 ? 6.401 9.345 51.195 1.00 13.52 ? 4 DA A "C5'" 1
ATOM 64 C "C4'" . DA A 1 4 ? 5.058 8.654 51.151 1.00 14.44 ? 4 DA A "C4'" 1
ATOM 65 O "O4'" . DA A 1 4 ? 4.103 9.566 51.674 1.00 20.29 ? 4 DA A "O4'" 1
ATOM 66 C "C3'" . DA A 1 4 ? 4.637 8.380 49.742 1.00 23.48 ? 4 DA A "C3'" 1
ATOM 67 O "O3'" . DA A 1 4 ? 3.964 7.135 49.669 1.00 34.82 ? 4 DA A "O3'" 1
ATOM 68 C "C2'" . DA A 1 4 ? 3.729 9.530 49.440 1.00 19.04 ? 4 DA A "C2'" 1
ATOM 69 C "C1'" . DA A 1 4 ? 3.076 9.750 50.744 1.00 12.81 ? 4 DA A "C1'" 1
ATOM 70 N N9 . DA A 1 4 ? 2.769 11.127 50.909 1.00 7.19 ? 4 DA A N9 1
ATOM 71 C C8 . DA A 1 4 ? 3.405 12.286 50.524 1.00 6.02 ? 4 DA A C8 1
ATOM 72 N N7 . DA A 1 4 ? 2.785 13.377 50.903 1.00 15.48 ? 4 DA A N7 1
ATOM 73 C C5 . DA A 1 4 ? 1.666 12.863 51.587 1.00 7.86 ? 4 DA A C5 1
ATOM 74 C C6 . DA A 1 4 ? 0.578 13.460 52.195 1.00 9.26 ? 4 DA A C6 1
ATOM 75 N N6 . DA A 1 4 ? 0.411 14.757 52.287 1.00 12.37 ? 4 DA A N6 1
ATOM 76 N N1 . DA A 1 4 ? -0.330 12.686 52.726 1.00 9.94 ? 4 DA A N1 1
ATOM 77 C C2 . DA A 1 4 ? -0.139 11.378 52.640 1.00 12.87 ? 4 DA A C2 1
ATOM 78 N N3 . DA A 1 4 ? 0.829 10.643 52.123 1.00 10.08 ? 4 DA A N3 1
ATOM 79 C C4 . DA A 1 4 ? 1.695 11.499 51.599 1.00 11.82 ? 4 DA A C4 1
ATOM 80 P P . DC A 1 5 ? 3.619 6.513 48.216 1.00 34.10 ? 5 DC A P 1
ATOM 81 O OP1 . DC A 1 5 ? 3.770 5.054 48.365 1.00 25.13 ? 5 DC A OP1 1
ATOM 82 O OP2 . DC A 1 5 ? 4.351 7.267 47.166 1.00 31.98 ? 5 DC A OP2 1
ATOM 83 O "O5'" . DC A 1 5 ? 2.067 6.858 48.033 1.00 31.25 ? 5 DC A "O5'" 1
ATOM 84 C "C5'" . DC A 1 5 ? 1.058 6.246 48.859 1.00 28.04 ? 5 DC A "C5'" 1
ATOM 85 C "C4'" . DC A 1 5 ? -0.275 6.964 48.818 1.00 23.39 ? 5 DC A "C4'" 1
ATOM 86 O "O4'" . DC A 1 5 ? -0.139 8.294 49.278 1.00 27.28 ? 5 DC A "O4'" 1
ATOM 87 C "C3'" . DC A 1 5 ? -0.745 7.051 47.407 1.00 25.87 ? 5 DC A "C3'" 1
ATOM 88 O "O3'" . DC A 1 5 ? -1.712 6.024 47.147 1.00 31.64 ? 5 DC A "O3'" 1
ATOM 89 C "C2'" . DC A 1 5 ? -1.266 8.443 47.316 1.00 21.49 ? 5 DC A "C2'" 1
ATOM 90 C "C1'" . DC A 1 5 ? -1.198 9.007 48.721 1.00 18.11 ? 5 DC A "C1'" 1
ATOM 91 N N1 . DC A 1 5 ? -0.771 10.393 48.681 1.00 16.46 ? 5 DC A N1 1
ATOM 92 C C2 . DC A 1 5 ? -1.563 11.318 49.299 1.00 20.18 ? 5 DC A C2 1
ATOM 93 O O2 . DC A 1 5 ? -2.579 10.957 49.870 1.00 17.14 ? 5 DC A O2 1
ATOM 94 N N3 . DC A 1 5 ? -1.215 12.644 49.235 1.00 21.78 ? 5 DC A N3 1
ATOM 95 C C4 . DC A 1 5 ? -0.111 13.018 48.558 1.00 20.26 ? 5 DC A C4 1
ATOM 96 N N4 . DC A 1 5 ? 0.223 14.299 48.512 1.00 13.30 ? 5 DC A N4 1
ATOM 97 C C5 . DC A 1 5 ? 0.722 12.062 47.904 1.00 14.40 ? 5 DC A C5 1
ATOM 98 C C6 . DC A 1 5 ? 0.353 10.766 47.994 1.00 19.31 ? 5 DC A C6 1
ATOM 99 P P . DG A 1 6 ? -2.055 5.699 45.616 1.00 36.19 ? 6 DG A P 1
ATOM 100 O OP1 . DG A 1 6 ? -2.377 4.260 45.549 1.00 38.04 ? 6 DG A OP1 1
ATOM 101 O OP2 . DG A 1 6 ? -1.036 6.283 44.716 1.00 28.55 ? 6 DG A OP2 1
ATOM 102 O "O5'" . DG A 1 6 ? -3.346 6.556 45.298 1.00 30.80 ? 6 DG A "O5'" 1
ATOM 103 C "C5'" . DG A 1 6 ? -4.641 6.069 45.584 1.00 27.36 ? 6 DG A "C5'" 1
ATOM 104 C "C4'" . DG A 1 6 ? -5.660 6.815 44.773 1.00 25.05 ? 6 DG A "C4'" 1
ATOM 105 O "O4'" . DG A 1 6 ? -5.419 8.200 44.968 1.00 26.66 ? 6 DG A "O4'" 1
ATOM 106 C "C3'" . DG A 1 6 ? -5.517 6.604 43.280 1.00 26.78 ? 6 DG A "C3'" 1
ATOM 107 O "O3'" . DG A 1 6 ? -6.233 5.443 42.810 1.00 31.73 ? 6 DG A "O3'" 1
ATOM 108 C "C2'" . DG A 1 6 ? -6.198 7.856 42.795 1.00 23.05 ? 6 DG A "C2'" 1
ATOM 109 C "C1'" . DG A 1 6 ? -6.147 8.844 43.944 1.00 20.54 ? 6 DG A "C1'" 1
ATOM 110 N N9 . DG A 1 6 ? -5.449 10.059 43.595 1.00 14.29 ? 6 DG A N9 1
ATOM 111 C C8 . DG A 1 6 ? -4.281 10.179 42.930 1.00 9.14 ? 6 DG A C8 1
ATOM 112 N N7 . DG A 1 6 ? -3.930 11.410 42.726 1.00 18.14 ? 6 DG A N7 1
ATOM 113 C C5 . DG A 1 6 ? -4.929 12.132 43.338 1.00 18.52 ? 6 DG A C5 1
ATOM 114 C C6 . DG A 1 6 ? -5.063 13.503 43.477 1.00 27.61 ? 6 DG A C6 1
ATOM 115 O O6 . DG A 1 6 ? -4.294 14.359 43.057 1.00 34.43 ? 6 DG A O6 1
ATOM 116 N N1 . DG A 1 6 ? -6.208 13.848 44.180 1.00 26.78 ? 6 DG A N1 1
ATOM 117 C C2 . DG A 1 6 ? -7.094 12.977 44.693 1.00 20.65 ? 6 DG A C2 1
ATOM 118 N N2 . DG A 1 6 ? -8.123 13.491 45.310 1.00 17.87 ? 6 DG A N2 1
ATOM 119 N N3 . DG A 1 6 ? -6.976 11.666 44.577 1.00 25.61 ? 6 DG A N3 1
ATOM 120 C C4 . DG A 1 6 ? -5.861 11.318 43.886 1.00 16.73 ? 6 DG A C4 1
HETATM 121 C C1 . 232 B 2 . ? 3.302 17.127 61.944 1.00 24.10 ? 7 232 A C1 1
HETATM 122 N N2 . 232 B 2 . ? 3.432 18.453 61.680 1.00 28.30 ? 7 232 A N2 1
HETATM 123 C C3 . 232 B 2 . ? 4.522 18.977 61.079 1.00 23.98 ? 7 232 A C3 1
HETATM 124 C C4 . 232 B 2 . ? 5.544 18.179 60.709 1.00 25.85 ? 7 232 A C4 1
HETATM 125 C C5 . 232 B 2 . ? 6.534 15.999 60.567 1.00 22.44 ? 7 232 A C5 1
HETATM 126 C C6 . 232 B 2 . ? 6.475 14.668 60.808 1.00 17.91 ? 7 232 A C6 1
HETATM 127 N N7 . 232 B 2 . ? 5.088 12.805 61.826 1.00 20.52 ? 7 232 A N7 1
HETATM 128 C C8 . 232 B 2 . ? 3.136 11.692 62.947 1.00 18.01 ? 7 232 A C8 1
HETATM 129 C C9 . 232 B 2 . ? 1.936 11.868 63.538 1.00 22.86 ? 7 232 A C9 1
HETATM 130 C C11 . 232 B 2 . ? 2.118 14.306 63.060 1.00 15.48 ? 7 232 A C11 1
HETATM 131 C C12 . 232 B 2 . ? 5.465 16.810 60.978 1.00 24.02 ? 7 232 A C12 1
HETATM 132 C C13 . 232 B 2 . ? 5.368 14.111 61.463 1.00 18.22 ? 7 232 A C13 1
HETATM 133 C C14 . 232 B 2 . ? 3.841 12.771 62.414 1.00 11.10 ? 7 232 A C14 1
HETATM 134 C C15 . 232 B 2 . ? 3.362 14.072 62.465 1.00 14.23 ? 7 232 A C15 1
HETATM 135 C C16 . 232 B 2 . ? 4.293 14.900 61.861 1.00 16.11 ? 7 232 A C16 1
HETATM 136 C C17 . 232 B 2 . ? 4.339 16.258 61.595 1.00 21.89 ? 7 232 A C17 1
HETATM 137 C C19 . 232 B 2 . ? 2.316 19.430 62.028 1.00 32.60 ? 7 232 A C19 1
HETATM 138 C C10 . 232 B 2 . ? 1.388 13.186 63.621 1.00 22.48 ? 7 232 A C10 1
HETATM 139 O O10 . 232 B 2 . ? 0.143 13.247 64.264 1.00 35.40 ? 7 232 A O10 1
HETATM 140 C C18 . 232 B 2 . ? -0.383 14.523 64.344 1.00 39.05 ? 7 232 A C18 1
HETATM 141 C C20 . 232 B 2 . ? 1.066 19.194 61.146 1.00 26.89 ? 7 232 A C20 1
HETATM 142 N N21 . 232 B 2 . ? 1.204 19.462 59.676 1.00 33.74 ? 7 232 A N21 1
HETATM 143 C C22 . 232 B 2 . ? -0.013 18.922 59.017 1.00 32.49 ? 7 232 A C22 1
HETATM 144 C C23 . 232 B 2 . ? 0.100 18.946 57.490 1.00 26.64 ? 7 232 A C23 1
HETATM 145 C C24 . 232 B 2 . ? 0.307 20.377 56.996 1.00 28.70 ? 7 232 A C24 1
HETATM 146 C C25 . 232 B 2 . ? 1.429 21.135 57.775 1.00 25.72 ? 7 232 A C25 1
HETATM 147 C C26 . 232 B 2 . ? 1.354 20.911 59.322 1.00 30.34 ? 7 232 A C26 1
HETATM 148 C C27 . 232 B 2 . ? 0.790 20.194 55.573 1.00 35.95 ? 7 232 A C27 1
HETATM 149 C C28 . 232 B 2 . ? 0.000 21.029 54.558 0.50 40.01 ? 7 232 A C28 1
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