HEADER DNA 10-FEB-94 159D
TITLE SIDE BY SIDE BINDING OF TWO DISTAMYCIN A DRUGS IN THE MINOR GROOVE OF
TITLE 2 AN ALTERNATING B-DNA DUPLEX
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA (5'-D(*IP*CP*IP*CP*IP*CP*IP*C)-3');
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR X.CHEN,B.RAMAKRISHNAN,S.T.RAO,M.SUNDARALINGAM
REVDAT 4 07-FEB-24 159D 1 REMARK LINK
REVDAT 3 24-FEB-09 159D 1 VERSN
REVDAT 2 01-APR-03 159D 1 JRNL
REVDAT 1 07-FEB-95 159D 0
JRNL AUTH X.CHEN,B.RAMAKRISHNAN,S.T.RAO,M.SUNDARALINGAM
JRNL TITL BINDING OF TWO DISTAMYCIN A MOLECULES IN THE MINOR GROOVE OF
JRNL TITL 2 AN ALTERNATING B-DNA DUPLEX.
JRNL REF NAT.STRUCT.BIOL. V. 1 169 1994
JRNL REFN ISSN 1072-8368
JRNL PMID 7656035
JRNL DOI 10.1038/NSB0394-169
REMARK 2
REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 2254
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING SET) : 0.150
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 157
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 65
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.011
REMARK 3 BOND ANGLES (DEGREES) : 3.500
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 38.40
REMARK 3 IMPROPER ANGLES (DEGREES) : 15.30
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 159D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000170135.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 7.00
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : AREA DETECTOR
REMARK 200 DETECTOR MANUFACTURER : SIEMENS
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2423
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800
REMARK 200 RESOLUTION RANGE LOW (A) : 16.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: NULL
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 48.19
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, VAPOR DIFFUSION, HANGING DROP
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y,X,Z+1/4
REMARK 290 4555 Y,-X,Z+3/4
REMARK 290 5555 -X,Y,-Z
REMARK 290 6555 X,-Y,-Z+1/2
REMARK 290 7555 Y,X,-Z+3/4
REMARK 290 8555 -Y,-X,-Z+1/4
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.83500
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.41750
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.25250
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.83500
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.25250
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 14.41750
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 28.83500
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 41 O HOH A 41 8555 1.83
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DC A 2 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES
REMARK 500 DI A 3 O3' - P - OP1 ANGL. DEV. = 7.9 DEGREES
REMARK 500 DC A 4 O4' - C1' - C2' ANGL. DEV. = -5.1 DEGREES
REMARK 500 DC A 4 N1 - C2 - O2 ANGL. DEV. = 3.6 DEGREES
REMARK 500 DC A 6 N1 - C2 - O2 ANGL. DEV. = 4.1 DEGREES
REMARK 500 DI A 7 O3' - P - OP2 ANGL. DEV. = 7.5 DEGREES
REMARK 500 DC A 8 O3' - P - OP2 ANGL. DEV. = 9.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 DI A 3 0.07 SIDE CHAIN
REMARK 500 DI A 5 0.09 SIDE CHAIN
REMARK 500 DC A 6 0.06 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 10 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 DC A 6 OP2
REMARK 620 2 HOH A 11 O 89.4
REMARK 620 3 HOH A 19 O 87.1 91.9
REMARK 620 4 HOH A 20 O 98.4 171.6 91.5
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMY A 9
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 10
DBREF 159D A 1 8 PDB 159D 159D 1 8
SEQRES 1 A 8 DI DC DI DC DI DC DI DC
HET DMY A 9 35
HET MG A 10 1
HETNAM DMY DISTAMYCIN A
HETNAM MG MAGNESIUM ION
HETSYN DMY DISTAMYCIN; STALLIMYCIN
FORMUL 2 DMY C22 H27 N9 O4
FORMUL 3 MG MG 2+
FORMUL 4 HOH *65(H2 O)
LINK OP2 DC A 6 MG MG A 10 1555 1555 1.93
LINK MG MG A 10 O HOH A 11 1555 1555 2.05
LINK MG MG A 10 O HOH A 19 1555 1555 2.02
LINK MG MG A 10 O HOH A 20 1555 1555 2.09
SITE 1 AC1 13 DC A 2 DI A 3 DC A 4 DI A 5
SITE 2 AC1 13 DC A 6 DI A 7 DC A 8 HOH A 14
SITE 3 AC1 13 HOH A 22 HOH A 33 HOH A 49 HOH A 53
SITE 4 AC1 13 HOH A 67
SITE 1 AC2 6 DC A 6 HOH A 11 HOH A 13 HOH A 16
SITE 2 AC2 6 HOH A 19 HOH A 20
CRYST1 27.930 27.930 57.670 90.00 90.00 90.00 P 41 2 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.035804 0.000000 0.000000 0.00000
SCALE2 0.000000 0.035804 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017340 0.00000
ATOM 1 O5' DI A 1 -1.102 14.510 18.145 1.00 10.18 O
ATOM 2 C5' DI A 1 -1.090 13.132 17.759 1.00 9.69 C
ATOM 3 C4' DI A 1 -0.776 13.066 16.263 1.00 9.50 C
ATOM 4 O4' DI A 1 0.584 13.477 15.988 1.00 9.26 O
ATOM 5 C3' DI A 1 -0.941 11.685 15.675 1.00 9.65 C
ATOM 6 O3' DI A 1 -1.345 11.886 14.310 1.00 9.88 O
ATOM 7 C2' DI A 1 0.483 11.166 15.783 1.00 9.15 C
ATOM 8 C1' DI A 1 1.346 12.365 15.474 1.00 8.96 C
ATOM 9 N9 DI A 1 2.665 12.307 16.138 1.00 8.59 N
ATOM 10 C8 DI A 1 2.954 12.322 17.490 1.00 8.36 C
ATOM 11 N7 DI A 1 4.238 12.315 17.753 1.00 8.31 N
ATOM 12 C5 DI A 1 4.847 12.361 16.503 1.00 8.31 C
ATOM 13 C6 DI A 1 6.230 12.304 16.165 1.00 8.32 C
ATOM 14 O6 DI A 1 7.209 12.303 16.904 1.00 8.34 O
ATOM 15 N1 DI A 1 6.408 12.202 14.794 1.00 8.37 N
ATOM 16 C2 DI A 1 5.392 12.170 13.866 1.00 8.24 C
ATOM 17 N3 DI A 1 4.100 12.251 14.176 1.00 8.10 N
ATOM 18 C4 DI A 1 3.895 12.332 15.510 1.00 8.45 C
ATOM 19 P DC A 2 -1.852 10.676 13.394 1.00 10.86 P
ATOM 20 OP1 DC A 2 -2.466 11.281 12.181 1.00 10.99 O
ATOM 21 OP2 DC A 2 -2.658 9.809 14.271 1.00 11.19 O
ATOM 22 O5' DC A 2 -0.558 9.851 12.967 1.00 11.01 O
ATOM 23 C5' DC A 2 0.185 10.193 11.798 1.00 11.02 C
ATOM 24 C4' DC A 2 1.420 9.338 11.701 1.00 11.04 C
ATOM 25 O4' DC A 2 2.317 9.623 12.788 1.00 10.69 O
ATOM 26 C3' DC A 2 1.058 7.850 11.833 1.00 11.32 C
ATOM 27 O3' DC A 2 1.710 7.108 10.803 1.00 11.88 O
ATOM 28 C2' DC A 2 1.674 7.470 13.151 1.00 10.83 C
ATOM 29 C1' DC A 2 2.878 8.375 13.172 1.00 10.53 C
ATOM 30 N1 DC A 2 3.615 8.481 14.454 1.00 10.09 N
ATOM 31 C2 DC A 2 4.991 8.655 14.376 1.00 9.91 C
ATOM 32 O2 DC A 2 5.596 8.668 13.301 1.00 9.81 O
ATOM 33 N3 DC A 2 5.681 8.833 15.532 1.00 9.66 N
ATOM 34 C4 DC A 2 5.045 8.879 16.719 1.00 9.72 C
ATOM 35 N4 DC A 2 5.762 9.092 17.823 1.00 9.62 N
ATOM 36 C5 DC A 2 3.624 8.738 16.814 1.00 9.59 C
ATOM 37 C6 DC A 2 2.954 8.557 15.656 1.00 9.94 C
ATOM 38 P DI A 3 0.817 6.557 9.625 1.00 12.77 P
ATOM 39 OP1 DI A 3 0.063 7.527 8.802 1.00 13.49 O
ATOM 40 OP2 DI A 3 0.133 5.424 10.279 1.00 12.93 O
ATOM 41 O5' DI A 3 1.989 5.946 8.738 1.00 12.45 O
ATOM 42 C5' DI A 3 2.790 6.678 7.816 1.00 11.77 C
ATOM 43 C4' DI A 3 4.097 5.969 7.586 1.00 11.50 C
ATOM 44 O4' DI A 3 4.870 6.003 8.785 1.00 11.40 O
ATOM 45 C3' DI A 3 3.926 4.490 7.266 1.00 11.65 C
ATOM 46 O3' DI A 3 4.887 4.145 6.273 1.00 12.18 O
ATOM 47 C2' DI A 3 4.229 3.788 8.571 1.00 11.28 C
ATOM 48 C1' DI A 3 5.248 4.683 9.237 1.00 10.84 C
ATOM 49 N9 DI A 3 5.142 4.652 10.713 1.00 10.20 N
ATOM 50 C8 DI A 3 4.033 4.923 11.459 1.00 10.09 C
ATOM 51 N7 DI A 3 4.258 5.075 12.736 1.00 9.75 N
ATOM 52 C5 DI A 3 5.638 5.000 12.837 1.00 9.60 C
ATOM 53 C6 DI A 3 6.461 5.174 13.975 1.00 9.39 C
ATOM 54 O6 DI A 3 6.114 5.432 15.126 1.00 8.85 O
ATOM 55 N1 DI A 3 7.807 5.017 13.662 1.00 9.22 N
ATOM 56 C2 DI A 3 8.304 4.754 12.399 1.00 9.57 C
ATOM 57 N3 DI A 3 7.517 4.584 11.324 1.00 9.60 N
ATOM 58 C4 DI A 3 6.196 4.729 11.609 1.00 9.88 C
ATOM 59 P DC A 4 4.831 2.730 5.536 1.00 12.58 P
ATOM 60 OP1 DC A 4 5.499 3.081 4.256 1.00 12.89 O
ATOM 61 OP2 DC A 4 3.532 2.028 5.577 1.00 12.65 O
ATOM 62 O5' DC A 4 5.845 1.879 6.420 1.00 11.76 O
ATOM 63 C5' DC A 4 7.233 2.150 6.382 1.00 11.07 C
ATOM 64 C4' DC A 4 7.914 1.282 7.390 1.00 10.62 C
ATOM 65 O4' DC A 4 7.514 1.688 8.713 1.00 10.27 O
ATOM 66 C3' DC A 4 7.512 -0.179 7.258 1.00 10.35 C
ATOM 67 O3' DC A 4 8.724 -0.887 7.253 1.00 10.60 O
ATOM 68 C2' DC A 4 6.798 -0.455 8.560 1.00 10.25 C
ATOM 69 C1' DC A 4 7.461 0.511 9.516 1.00 9.85 C
ATOM 70 N1 DC A 4 6.702 0.810 10.766 1.00 9.37 N
ATOM 71 C2 DC A 4 7.451 1.131 11.902 1.00 9.14 C
ATOM 72 O2 DC A 4 8.684 1.119 11.909 1.00 8.73 O
ATOM 73 N3 DC A 4 6.782 1.463 13.045 1.00 9.05 N
ATOM 74 C4 DC A 4 5.438 1.466 13.077 1.00 9.14 C
ATOM 75 N4 DC A 4 4.837 1.812 14.218 1.00 8.78 N
ATOM 76 C5 DC A 4 4.658 1.162 11.901 1.00 9.01 C
ATOM 77 C6 DC A 4 5.337 0.912 10.765 1.00 9.04 C
ATOM 78 P DI A 5 9.224 -1.595 5.910 1.00 10.67 P
ATOM 79 OP1 DI A 5 9.244 -0.587 4.819 1.00 11.00 O
ATOM 80 OP2 DI A 5 8.480 -2.865 5.728 1.00 10.73 O
ATOM 81 O5' DI A 5 10.717 -1.997 6.293 1.00 10.19 O
ATOM 82 C5' DI A 5 11.737 -1.026 6.535 1.00 9.74 C
ATOM 83 C4' DI A 5 12.589 -1.389 7.734 1.00 9.49 C
ATOM 84 O4' DI A 5 11.811 -1.272 8.925 1.00 9.33 O
ATOM 85 C3' DI A 5 13.113 -2.820 7.689 1.00 9.36 C
ATOM 86 O3' DI A 5 14.488 -2.770 8.028 1.00 9.28 O
ATOM 87 C2' DI A 5 12.270 -3.557 8.714 1.00 9.21 C
ATOM 88 C1' DI A 5 11.823 -2.484 9.709 1.00 9.05 C
ATOM 89 N9 DI A 5 10.439 -2.750 10.194 1.00 8.77 N
ATOM 90 C8 DI A 5 9.371 -3.208 9.459 1.00 8.63 C
ATOM 91 N7 DI A 5 8.236 -3.143 10.075 1.00 8.62 N
ATOM 92 C5 DI A 5 8.561 -2.601 11.315 1.00 8.56 C
ATOM 93 C6 DI A 5 7.713 -2.328 12.420 1.00 8.60 C
ATOM 94 O6 DI A 5 6.485 -2.394 12.453 1.00 8.58 O
ATOM 95 N1 DI A 5 8.428 -1.909 13.548 1.00 8.56 N
ATOM 96 C2 DI A 5 9.800 -1.806 13.606 1.00 8.40 C
ATOM 97 N3 DI A 5 10.597 -2.031 12.544 1.00 8.48 N
ATOM 98 C4 DI A 5 9.908 -2.387 11.421 1.00 8.59 C
ATOM 99 P DC A 6 15.389 -4.077 7.982 1.00 9.51 P
ATOM 100 OP1 DC A 6 16.733 -3.488 7.836 1.00 9.64 O
ATOM 101 OP2 DC A 6 14.941 -5.155 7.079 1.00 9.59 O
ATOM 102 O5' DC A 6 15.246 -4.620 9.500 1.00 9.39 O
ATOM 103 C5' DC A 6 15.701 -3.824 10.593 1.00 9.17 C
ATOM 104 C4' DC A 6 15.126 -4.377 11.875 1.00 8.99 C
ATOM 105 O4' DC A 6 13.718 -4.365 11.807 1.00 8.63 O
ATOM 106 C3' DC A 6 15.540 -5.800 12.081 1.00 9.27 C
ATOM 107 O3' DC A 6 16.563 -5.777 13.072 1.00 10.00 O
ATOM 108 C2' DC A 6 14.254 -6.480 12.518 1.00 9.01 C
ATOM 109 C1' DC A 6 13.276 -5.347 12.736 1.00 8.59 C
ATOM 110 N1 DC A 6 11.871 -5.700 12.460 1.00 8.19 N
ATOM 111 C2 DC A 6 10.905 -5.406 13.423 1.00 7.95 C
ATOM 112 O2 DC A 6 11.185 -5.001 14.550 1.00 7.56 O
ATOM 113 N3 DC A 6 9.594 -5.562 13.084 1.00 7.77 N
ATOM 114 C4 DC A 6 9.244 -5.995 11.856 1.00 7.95 C
ATOM 115 N4 DC A 6 7.945 -6.147 11.566 1.00 7.91 N
ATOM 116 C5 DC A 6 10.231 -6.321 10.873 1.00 7.82 C
ATOM 117 C6 DC A 6 11.526 -6.187 11.234 1.00 8.05 C
ATOM 118 P DI A 7 17.261 -7.128 13.601 1.00 11.22 P
ATOM 119 OP1 DI A 7 18.439 -6.471 14.206 1.00 12.20 O
ATOM 120 OP2 DI A 7 17.462 -8.227 12.639 1.00 12.15 O
ATOM 121 O5' DI A 7 16.333 -7.707 14.767 1.00 11.13 O
ATOM 122 C5' DI A 7 16.048 -6.930 15.928 1.00 10.33 C
ATOM 123 C4' DI A 7 14.846 -7.500 16.633 1.00 9.97 C
ATOM 124 O4' DI A 7 13.692 -7.509 15.780 1.00 9.50 O
ATOM 125 C3' DI A 7 15.090 -8.925 17.087 1.00 10.10 C
ATOM 126 O3' DI A 7 14.890 -8.913 18.497 1.00 10.66 O
ATOM 127 C2' DI A 7 14.033 -9.701 16.327 1.00 9.72 C
ATOM 128 C1' DI A 7 12.942 -8.699 16.014 1.00 9.35 C
ATOM 129 N9 DI A 7 12.201 -8.997 14.782 1.00 9.11 N
ATOM 130 C8 DI A 7 12.711 -9.318 13.551 1.00 9.12 C
ATOM 131 N7 DI A 7 11.800 -9.450 12.626 1.00 8.80 N
ATOM 132 C5 DI A 7 10.598 -9.194 13.282 1.00 8.80 C
ATOM 133 C6 DI A 7 9.260 -9.242 12.787 1.00 8.78 C
ATOM 134 O6 DI A 7 8.883 -9.482 11.636 1.00 8.40 O
ATOM 135 N1 DI A 7 8.341 -8.909 13.763 1.00 8.52 N
ATOM 136 C2 DI A 7 8.657 -8.587 15.057 1.00 8.73 C
ATOM 137 N3 DI A 7 9.902 -8.581 15.530 1.00 8.72 N
ATOM 138 C4 DI A 7 10.832 -8.863 14.590 1.00 8.89 C
ATOM 139 P DC A 8 15.140 -10.268 19.311 1.00 11.44 P
ATOM 140 OP1 DC A 8 15.516 -9.672 20.618 1.00 11.88 O
ATOM 141 OP2 DC A 8 15.948 -11.345 18.708 1.00 11.72 O
ATOM 142 O5' DC A 8 13.665 -10.863 19.438 1.00 10.79 O
ATOM 143 C5' DC A 8 12.689 -10.251 20.286 1.00 9.99 C
ATOM 144 C4' DC A 8 11.372 -10.976 20.142 1.00 9.46 C
ATOM 145 O4' DC A 8 10.942 -10.874 18.762 1.00 9.03 O
ATOM 146 C3' DC A 8 11.540 -12.485 20.452 1.00 9.23 C
ATOM 147 O3' DC A 8 10.623 -12.919 21.476 1.00 9.28 O
ATOM 148 C2' DC A 8 11.248 -13.137 19.104 1.00 8.91 C
ATOM 149 C1' DC A 8 10.339 -12.121 18.421 1.00 8.58 C
ATOM 150 N1 DC A 8 10.292 -12.269 16.952 1.00 8.09 N
ATOM 151 C2 DC A 8 9.053 -12.237 16.332 1.00 7.59 C
ATOM 152 O2 DC A 8 8.010 -12.135 16.965 1.00 7.53 O
ATOM 153 N3 DC A 8 8.998 -12.293 14.976 1.00 7.36 N
ATOM 154 C4 DC A 8 10.114 -12.328 14.254 1.00 7.47 C
ATOM 155 N4 DC A 8 10.005 -12.433 12.924 1.00 7.42 N
ATOM 156 C5 DC A 8 11.411 -12.302 14.872 1.00 7.61 C
ATOM 157 C6 DC A 8 11.445 -12.274 16.223 1.00 7.84 C
TER 158 DC A 8
HETATM 159 C1 DMY A 9 10.092 -3.209 19.679 1.00 9.07 C
HETATM 160 O1 DMY A 9 10.670 -3.523 20.725 1.00 9.29 O
HETATM 161 N1 DMY A 9 10.487 -2.391 18.677 1.00 8.68 N
HETATM 162 C2 DMY A 9 11.681 -1.712 18.633 1.00 8.39 C
HETATM 163 C3 DMY A 9 12.061 -0.843 17.609 1.00 8.18 C
HETATM 164 C4 DMY A 9 13.414 -0.532 17.764 1.00 8.26 C
HETATM 165 N2 DMY A 9 13.852 -1.177 18.943 1.00 8.43 N
HETATM 166 C5 DMY A 9 12.829 -1.851 19.437 1.00 8.48 C
HETATM 167 C6 DMY A 9 15.193 -0.985 19.634 1.00 8.45 C
HETATM 168 C7 DMY A 9 14.173 0.285 16.893 1.00 8.20 C
HETATM 169 O2 DMY A 9 15.398 0.404 17.006 1.00 8.22 O
HETATM 170 N3 DMY A 9 13.561 1.059 15.969 1.00 8.05 N
HETATM 171 C8 DMY A 9 14.176 1.793 14.986 1.00 7.88 C
HETATM 172 C9 DMY A 9 13.529 2.676 14.130 1.00 7.75 C
HETATM 173 C10 DMY A 9 14.449 3.154 13.187 1.00 7.84 C
HETATM 174 N4 DMY A 9 15.685 2.590 13.515 1.00 7.76 N
HETATM 175 C11 DMY A 9 15.502 1.774 14.531 1.00 7.97 C
HETATM 176 C12 DMY A 9 17.033 2.837 12.837 1.00 8.19 C
HETATM 177 C13 DMY A 9 14.105 3.921 12.050 1.00 7.85 C
HETATM 178 O3 DMY A 9 14.891 4.139 11.126 1.00 7.92 O
HETATM 179 N5 DMY A 9 12.942 4.575 12.026 1.00 7.95 N
HETATM 180 C14 DMY A 9 12.472 5.364 11.016 1.00 8.16 C
HETATM 181 C15 DMY A 9 11.338 6.161 11.094 1.00 8.38 C
HETATM 182 C16 DMY A 9 11.053 6.635 9.800 1.00 8.72 C
HETATM 183 N6 DMY A 9 12.146 6.290 8.982 1.00 8.81 N
HETATM 184 C17 DMY A 9 12.919 5.492 9.686 1.00 8.52 C
HETATM 185 C18 DMY A 9 12.303 6.583 7.482 1.00 8.80 C
HETATM 186 C19 DMY A 9 9.939 7.451 9.448 1.00 8.88 C
HETATM 187 O4 DMY A 9 9.599 7.686 8.267 1.00 8.99 O
HETATM 188 N7 DMY A 9 9.253 8.108 10.393 1.00 8.60 N
HETATM 189 C20 DMY A 9 8.123 8.969 10.117 1.00 8.68 C
HETATM 190 C21 DMY A 9 6.823 8.218 9.962 1.00 8.49 C
HETATM 191 C22 DMY A 9 5.723 9.207 9.658 1.00 8.64 C
HETATM 192 N8 DMY A 9 5.624 9.665 8.416 1.00 8.43 N
HETATM 193 N9 DMY A 9 4.992 9.724 10.644 1.00 8.52 N
HETATM 194 MG MG A 10 13.963 -6.589 6.229 1.00 9.22 MG
HETATM 195 O HOH A 11 14.891 -6.144 4.457 1.00 7.95 O
HETATM 196 O HOH A 12 10.146 1.858 4.175 1.00 16.99 O
HETATM 197 O HOH A 13 5.388 12.249 20.160 1.00 10.06 O
HETATM 198 O HOH A 14 3.621 12.227 11.143 1.00 10.77 O
HETATM 199 O HOH A 15 9.484 -5.322 6.525 1.00 14.01 O
HETATM 200 O HOH A 16 8.118 13.161 19.244 1.00 9.15 O
HETATM 201 O HOH A 17 1.431 14.921 19.167 1.00 17.38 O
HETATM 202 O HOH A 18 7.276 -0.165 2.962 1.00 20.28 O
HETATM 203 O HOH A 19 15.469 -7.809 6.790 1.00 8.85 O
HETATM 204 O HOH A 20 12.807 -7.178 7.861 1.00 10.93 O
HETATM 205 O HOH A 21 7.068 -7.628 6.001 1.00 11.10 O
HETATM 206 O HOH A 22 12.058 2.906 5.806 1.00 30.42 O
HETATM 207 O HOH A 23 15.557 -9.440 11.047 1.00 37.39 O
HETATM 208 O HOH A 24 13.364 -8.810 9.861 1.00 22.47 O
HETATM 209 O HOH A 25 9.988 -10.454 9.460 1.00 21.00 O
HETATM 210 O HOH A 26 6.110 -3.752 5.659 1.00 38.08 O
HETATM 211 O HOH A 27 1.199 2.384 10.906 1.00 49.44 O
HETATM 212 O HOH A 28 17.344 -1.452 6.309 1.00 26.43 O
HETATM 213 O HOH A 29 -1.320 10.149 7.610 1.00 52.28 O
HETATM 214 O HOH A 30 15.721 -11.499 13.545 1.00 51.58 O
HETATM 215 O HOH A 31 6.870 5.755 4.534 1.00 53.20 O
HETATM 216 O HOH A 32 19.171 -4.506 9.455 1.00 48.20 O
HETATM 217 O HOH A 33 8.658 5.358 6.857 1.00 21.70 O
HETATM 218 O HOH A 34 14.628 2.887 6.200 1.00 35.09 O
HETATM 219 O HOH A 35 19.142 -3.681 13.072 1.00 47.09 O
HETATM 220 O HOH A 36 18.481 -10.424 18.100 1.00 57.97 O
HETATM 221 O HOH A 37 15.048 -12.922 16.884 1.00 27.72 O
HETATM 222 O HOH A 38 4.430 -2.712 10.864 1.00 39.50 O
HETATM 223 O HOH A 39 1.939 2.070 14.125 1.00 29.25 O
HETATM 224 O HOH A 40 4.459 -5.965 5.392 1.00 25.02 O
HETATM 225 O HOH A 41 0.264 1.032 7.228 1.00 66.47 O
HETATM 226 O HOH A 42 18.842 1.591 19.534 1.00 54.28 O
HETATM 227 O HOH A 43 3.184 4.949 15.639 1.00 48.17 O
HETATM 228 O HOH A 44 16.288 -7.534 9.163 1.00 65.55 O
HETATM 229 O HOH A 45 21.407 -3.947 10.592 1.00 50.82 O
HETATM 230 O HOH A 46 0.047 3.960 6.058 1.00 70.76 O
HETATM 231 O HOH A 47 19.355 -1.685 19.045 1.00 69.98 O
HETATM 232 O HOH A 48 22.724 -1.823 9.909 1.00 60.67 O
HETATM 233 O HOH A 49 7.548 8.447 6.567 1.00 28.11 O
HETATM 234 O HOH A 50 4.515 -2.744 7.703 1.00 58.10 O
HETATM 235 O HOH A 51 10.166 -8.127 7.541 1.00 33.56 O
HETATM 236 O HOH A 52 10.464 9.192 5.322 1.00 27.86 O
HETATM 237 O HOH A 53 16.914 -4.690 19.531 1.00 47.95 O
HETATM 238 O HOH A 54 16.306 -6.812 21.469 1.00 47.49 O
HETATM 239 O HOH A 55 17.656 -13.190 20.279 1.00 51.36 O
HETATM 240 O HOH A 56 -1.579 3.164 8.222 1.00 64.69 O
HETATM 241 O HOH A 57 3.051 0.290 8.292 1.00 80.54 O
HETATM 242 O HOH A 58 6.148 3.924 1.968 1.00 60.92 O
HETATM 243 O HOH A 59 10.193 4.531 1.939 1.00 77.93 O
HETATM 244 O HOH A 60 -2.944 6.878 9.797 1.00 91.27 O
HETATM 245 O HOH A 61 20.177 -9.483 11.202 1.00 75.79 O
HETATM 246 O HOH A 62 12.810 -12.331 11.635 1.00 28.51 O
HETATM 247 O HOH A 63 -4.612 13.080 12.771 1.00 60.39 O
HETATM 248 O HOH A 64 -3.846 9.941 10.037 1.00 75.72 O
HETATM 249 O HOH A 65 -1.991 7.091 14.506 1.00 84.80 O
HETATM 250 O HOH A 66 13.138 -11.971 8.350 1.00 54.60 O
HETATM 251 O HOH A 67 17.981 0.960 17.262 1.00 59.53 O
HETATM 252 O HOH A 68 16.688 -12.123 9.625 1.00 63.14 O
HETATM 253 O HOH A 69 -2.556 8.108 17.151 1.00 65.65 O
HETATM 254 O HOH A 70 4.049 -1.543 4.796 1.00 73.89 O
HETATM 255 O HOH A 71 23.489 -3.665 12.045 1.00 74.78 O
HETATM 256 O HOH A 72 11.951 5.765 4.133 1.00 58.61 O
HETATM 257 O HOH A 73 -0.957 4.670 13.580 1.00 66.66 O
HETATM 258 O HOH A 74 19.235 -6.818 10.723 1.00 67.10 O
HETATM 259 O HOH A 75 15.050 6.303 4.764 1.00 63.70 O
CONECT 101 194
CONECT 159 160 161
CONECT 160 159
CONECT 161 159 162
CONECT 162 161 163 166
CONECT 163 162 164
CONECT 164 163 165 168
CONECT 165 164 166 167
CONECT 166 162 165
CONECT 167 165
CONECT 168 164 169 170
CONECT 169 168
CONECT 170 168 171
CONECT 171 170 172 175
CONECT 172 171 173
CONECT 173 172 174 177
CONECT 174 173 175 176
CONECT 175 171 174
CONECT 176 174
CONECT 177 173 178 179
CONECT 178 177
CONECT 179 177 180
CONECT 180 179 181 184
CONECT 181 180 182
CONECT 182 181 183 186
CONECT 183 182 184 185
CONECT 184 180 183
CONECT 185 183
CONECT 186 182 187 188
CONECT 187 186
CONECT 188 186 189
CONECT 189 188 190
CONECT 190 189 191
CONECT 191 190 192 193
CONECT 192 191
CONECT 193 191
CONECT 194 101 195 203 204
CONECT 195 194
CONECT 203 194
CONECT 204 194
MASTER 301 0 2 0 0 0 6 6 258 1 40 1
END