data_152D
#
_entry.id 152D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 152D pdb_0000152d 10.2210/pdb152d/pdb
RCSB DDF045 ? ?
WWPDB D_1000170120 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1994-05-04
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 152D
_pdbx_database_status.recvd_initial_deposition_date 1993-12-13
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Lipscomb, L.A.' 1
'Peek, M.E.' 2
'Zhou, F.X.' 3
'Bertrand, J.A.' 4
'VanDerveer, D.' 5
'Williams, L.D.' 6
#
_citation.id primary
_citation.title
'Water ring structure at DNA interfaces: hydration and dynamics of DNA-anthracycline complexes.'
_citation.journal_abbrev Biochemistry
_citation.journal_volume 33
_citation.page_first 3649
_citation.page_last 3659
_citation.year 1994
_citation.journal_id_ASTM BICHAW
_citation.country US
_citation.journal_id_ISSN 0006-2960
_citation.journal_id_CSD 0033
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 8142363
_citation.pdbx_database_id_DOI 10.1021/bi00178a023
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Lipscomb, L.A.' 1 ?
primary 'Peek, M.E.' 2 ?
primary 'Zhou, F.X.' 3 ?
primary 'Bertrand, J.A.' 4 ?
primary 'VanDerveer, D.' 5 ?
primary 'Williams, L.D.' 6 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
;
1809.217 1 ? ? ? ?
2 non-polymer syn DAUNOMYCIN 527.520 1 ? ? ? ?
3 water nat water 18.015 54 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DC)(DG)'
_entity_poly.pdbx_seq_one_letter_code_can CGATCG
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 DAUNOMYCIN DM1
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DC n
1 2 DG n
1 3 DA n
1 4 DT n
1 5 DC n
1 6 DG n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DM1 non-polymer . DAUNOMYCIN DAUNORUBICIN 'C27 H29 N O10' 527.520
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DC 1 1 1 DC C A . n
A 1 2 DG 2 2 2 DG G A . n
A 1 3 DA 3 3 3 DA A A . n
A 1 4 DT 4 4 4 DT T A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DG 6 6 6 DG G A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DM1 1 7 7 DM1 DM1 A .
C 3 HOH 1 8 8 HOH HOH A .
C 3 HOH 2 9 9 HOH HOH A .
C 3 HOH 3 10 10 HOH HOH A .
C 3 HOH 4 11 11 HOH HOH A .
C 3 HOH 5 12 12 HOH HOH A .
C 3 HOH 6 13 13 HOH HOH A .
C 3 HOH 7 14 14 HOH HOH A .
C 3 HOH 8 15 15 HOH HOH A .
C 3 HOH 9 16 16 HOH HOH A .
C 3 HOH 10 17 17 HOH HOH A .
C 3 HOH 11 18 18 HOH HOH A .
C 3 HOH 12 19 19 HOH HOH A .
C 3 HOH 13 20 20 HOH HOH A .
C 3 HOH 14 21 21 HOH HOH A .
C 3 HOH 15 22 22 HOH HOH A .
C 3 HOH 16 23 23 HOH HOH A .
C 3 HOH 17 24 24 HOH HOH A .
C 3 HOH 18 25 25 HOH HOH A .
C 3 HOH 19 26 26 HOH HOH A .
C 3 HOH 20 27 27 HOH HOH A .
C 3 HOH 21 28 28 HOH HOH A .
C 3 HOH 22 29 29 HOH HOH A .
C 3 HOH 23 30 30 HOH HOH A .
C 3 HOH 24 31 31 HOH HOH A .
C 3 HOH 25 32 32 HOH HOH A .
C 3 HOH 26 33 33 HOH HOH A .
C 3 HOH 27 34 34 HOH HOH A .
C 3 HOH 28 35 35 HOH HOH A .
C 3 HOH 29 36 36 HOH HOH A .
C 3 HOH 30 37 37 HOH HOH A .
C 3 HOH 31 38 38 HOH HOH A .
C 3 HOH 32 39 39 HOH HOH A .
C 3 HOH 33 40 40 HOH HOH A .
C 3 HOH 34 41 41 HOH HOH A .
C 3 HOH 35 42 42 HOH HOH A .
C 3 HOH 36 43 43 HOH HOH A .
C 3 HOH 37 44 44 HOH HOH A .
C 3 HOH 38 45 45 HOH HOH A .
C 3 HOH 39 46 46 HOH HOH A .
C 3 HOH 40 47 47 HOH HOH A .
C 3 HOH 41 48 48 HOH HOH A .
C 3 HOH 42 49 49 HOH HOH A .
C 3 HOH 43 50 50 HOH HOH A .
C 3 HOH 44 51 51 HOH HOH A .
C 3 HOH 45 52 52 HOH HOH A .
C 3 HOH 46 53 53 HOH HOH A .
C 3 HOH 47 54 54 HOH HOH A .
C 3 HOH 48 55 55 HOH HOH A .
C 3 HOH 49 56 56 HOH HOH A .
C 3 HOH 50 57 57 HOH HOH A .
C 3 HOH 51 58 58 HOH HOH A .
C 3 HOH 52 59 59 HOH HOH A .
C 3 HOH 53 60 60 HOH HOH A .
C 3 HOH 54 61 61 HOH HOH A .
#
_software.name NUCLSQ
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 152D
_cell.length_a 27.850
_cell.length_b 27.850
_cell.length_c 52.330
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 152D
_symmetry.space_group_name_H-M 'P 41 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 92
#
_exptl.entry_id 152D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.80
_exptl_crystal.density_percent_sol 56.14
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.50
_exptl_crystal_grow.pdbx_details 'pH 6.50, VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 MPD ? ? ?
1 3 1 'NA CACODYLATE' ? ? ?
1 4 1 MGCL2 ? ? ?
1 5 1 SPERMINE_HCL ? ? ?
1 6 2 WATER ? ? ?
1 7 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 113.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'AREA DETECTOR'
_diffrn_detector.type SDMS
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RU200'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 152D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F 1.000
_reflns.d_resolution_low ?
_reflns.d_resolution_high 1.400
_reflns.number_obs 3817
_reflns.number_all 54233
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 152D
_refine.ls_number_reflns_obs 3817
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low ?
_refine.ls_d_res_high 1.400
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.2260000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 120
_refine_hist.pdbx_number_atoms_ligand 38
_refine_hist.number_atoms_solvent 54
_refine_hist.number_atoms_total 212
_refine_hist.d_res_high 1.400
_refine_hist.d_res_low .
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
n_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_d 0.027 ? ? ? 'X-RAY DIFFRACTION' ?
n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 152D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 152D
_struct.title
'DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 152D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 152D
_struct_ref.pdbx_db_accession 152D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 152D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 6
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 152D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 6
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 6
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 27.8500000000 -1.0000000000
0.0000000000 0.0000000000 27.8500000000 0.0000000000 0.0000000000 -1.0000000000 26.1650000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 1 A DG 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 1 A DG 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 1 A DG 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 3 A DT 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 3 A DT 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 4 A DA 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 4 A DA 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 6 A DC 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 6 A DC 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 6 A DC 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A DM1 7 ? 13 'BINDING SITE FOR RESIDUE DM1 A 7'
1 ? ? ? ? ? ? ?
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 13 DC A 1 ? DC A 1 . ? 8_665 ?
2 AC1 13 DG A 2 ? DG A 2 . ? 8_665 ?
3 AC1 13 DA A 3 ? DA A 3 . ? 8_665 ?
4 AC1 13 DT A 4 ? DT A 4 . ? 1_555 ?
5 AC1 13 DC A 5 ? DC A 5 . ? 1_555 ?
6 AC1 13 DG A 6 ? DG A 6 . ? 1_555 ?
7 AC1 13 HOH C . ? HOH A 8 . ? 8_665 ?
8 AC1 13 HOH C . ? HOH A 11 . ? 1_555 ?
9 AC1 13 HOH C . ? HOH A 12 . ? 8_665 ?
10 AC1 13 HOH C . ? HOH A 19 . ? 1_555 ?
11 AC1 13 HOH C . ? HOH A 22 . ? 1_555 ?
12 AC1 13 HOH C . ? HOH A 23 . ? 1_555 ?
13 AC1 13 HOH C . ? HOH A 27 . ? 1_555 ?
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 1.591 1.519 0.072 0.010 N
2 1 "O3'" A DC 1 ? ? "C3'" A DC 1 ? ? 1.381 1.419 -0.038 0.006 N
3 1 "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 1.623 1.519 0.104 0.010 N
4 1 C6 A DG 2 ? ? N1 A DG 2 ? ? 1.335 1.391 -0.056 0.007 N
5 1 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.351 1.305 0.046 0.006 N
6 1 C2 A DG 2 ? ? N2 A DG 2 ? ? 1.247 1.341 -0.094 0.010 N
7 1 "C2'" A DA 3 ? ? "C1'" A DA 3 ? ? 1.614 1.519 0.095 0.010 N
8 1 "O3'" A DA 3 ? ? "C3'" A DA 3 ? ? 1.332 1.419 -0.087 0.006 N
9 1 P A DT 4 ? ? "O5'" A DT 4 ? ? 1.656 1.593 0.063 0.010 N
10 1 "O3'" A DT 4 ? ? "C3'" A DT 4 ? ? 1.350 1.419 -0.069 0.006 N
11 1 P A DC 5 ? ? "O5'" A DC 5 ? ? 1.679 1.593 0.086 0.010 N
12 1 "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 1.568 1.512 0.056 0.007 N
13 1 "C2'" A DC 5 ? ? "C1'" A DC 5 ? ? 1.601 1.519 0.082 0.010 N
14 1 N1 A DG 6 ? ? C2 A DG 6 ? ? 1.318 1.373 -0.055 0.008 N
15 1 C6 A DG 6 ? ? N1 A DG 6 ? ? 1.334 1.391 -0.057 0.007 N
16 1 N9 A DG 6 ? ? C4 A DG 6 ? ? 1.426 1.375 0.051 0.008 N
17 1 C2 A DG 6 ? ? N2 A DG 6 ? ? 1.260 1.341 -0.081 0.010 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 C2 A DC 1 ? ? N3 A DC 1 ? ? C4 A DC 1 ? ? 125.65 119.90 5.75 0.50 N
2 1 N3 A DC 1 ? ? C4 A DC 1 ? ? C5 A DC 1 ? ? 116.17 121.90 -5.73 0.40 N
3 1 "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 103.73 109.40 -5.67 0.80 N
4 1 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 95.91 102.40 -6.49 0.80 N
5 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.16 108.30 4.86 0.30 N
6 1 C6 A DG 2 ? ? N1 A DG 2 ? ? C2 A DG 2 ? ? 119.82 125.10 -5.28 0.60 N
7 1 N1 A DG 2 ? ? C2 A DG 2 ? ? N3 A DG 2 ? ? 128.62 123.90 4.72 0.60 N
8 1 C2 A DG 2 ? ? N3 A DG 2 ? ? C4 A DG 2 ? ? 108.82 111.90 -3.08 0.50 N
9 1 C5 A DG 2 ? ? C6 A DG 2 ? ? N1 A DG 2 ? ? 117.89 111.50 6.39 0.50 N
10 1 N3 A DG 2 ? ? C2 A DG 2 ? ? N2 A DG 2 ? ? 111.49 119.90 -8.41 0.70 N
11 1 N1 A DG 2 ? ? C6 A DG 2 ? ? O6 A DG 2 ? ? 116.09 119.90 -3.81 0.60 N
12 1 "O5'" A DA 3 ? ? P A DA 3 ? ? OP1 A DA 3 ? ? 100.28 105.70 -5.42 0.90 N
13 1 "O5'" A DA 3 ? ? "C5'" A DA 3 ? ? "C4'" A DA 3 ? ? 100.54 109.40 -8.86 0.80 N
14 1 "C3'" A DA 3 ? ? "O3'" A DA 3 ? ? P A DT 4 ? ? 130.79 119.70 11.09 1.20 Y
15 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 102.59 108.00 -5.41 0.70 N
16 1 C4 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 123.28 119.00 4.28 0.60 N
17 1 OP1 A DC 5 ? ? P A DC 5 ? ? OP2 A DC 5 ? ? 129.22 119.60 9.62 1.50 N
18 1 "O5'" A DC 5 ? ? P A DC 5 ? ? OP1 A DC 5 ? ? 98.34 105.70 -7.36 0.90 N
19 1 "O5'" A DC 5 ? ? "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 104.23 109.40 -5.17 0.80 N
20 1 "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? "C1'" A DC 5 ? ? 95.28 102.40 -7.12 0.80 N
21 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? "C2'" A DC 5 ? ? 109.85 106.80 3.05 0.50 N
22 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 118.62 108.30 10.32 0.30 N
23 1 C2 A DC 5 ? ? N3 A DC 5 ? ? C4 A DC 5 ? ? 125.57 119.90 5.67 0.50 N
24 1 N3 A DC 5 ? ? C4 A DC 5 ? ? C5 A DC 5 ? ? 117.72 121.90 -4.18 0.40 N
25 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 125.59 118.90 6.69 0.60 N
26 1 C5 A DC 5 ? ? C4 A DC 5 ? ? N4 A DC 5 ? ? 125.95 120.20 5.75 0.70 N
27 1 "C1'" A DG 6 ? ? "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? 115.37 110.30 5.07 0.70 N
28 1 C6 A DG 6 ? ? N1 A DG 6 ? ? C2 A DG 6 ? ? 120.48 125.10 -4.62 0.60 N
29 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N3 A DG 6 ? ? 128.96 123.90 5.06 0.60 N
30 1 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 116.80 111.50 5.30 0.50 N
31 1 N3 A DG 6 ? ? C2 A DG 6 ? ? N2 A DG 6 ? ? 110.57 119.90 -9.33 0.70 N
32 1 C5 A DG 6 ? ? C6 A DG 6 ? ? O6 A DG 6 ? ? 124.62 128.60 -3.98 0.60 N
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text INTERCALATION
#
loop_
_refine_B_iso.class
_refine_B_iso.details
_refine_B_iso.treatment
_refine_B_iso.pdbx_refine_id
'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION'
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION'
#
loop_
_refine_occupancy.class
_refine_occupancy.treatment
_refine_occupancy.pdbx_refine_id
'ALL ATOMS' fix 'X-RAY DIFFRACTION'
'ALL WATERS' fix 'X-RAY DIFFRACTION'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DA OP3 O N N 1
DA P P N N 2
DA OP1 O N N 3
DA OP2 O N N 4
DA "O5'" O N N 5
DA "C5'" C N N 6
DA "C4'" C N R 7
DA "O4'" O N N 8
DA "C3'" C N S 9
DA "O3'" O N N 10
DA "C2'" C N N 11
DA "C1'" C N R 12
DA N9 N Y N 13
DA C8 C Y N 14
DA N7 N Y N 15
DA C5 C Y N 16
DA C6 C Y N 17
DA N6 N N N 18
DA N1 N Y N 19
DA C2 C Y N 20
DA N3 N Y N 21
DA C4 C Y N 22
DA HOP3 H N N 23
DA HOP2 H N N 24
DA "H5'" H N N 25
DA "H5''" H N N 26
DA "H4'" H N N 27
DA "H3'" H N N 28
DA "HO3'" H N N 29
DA "H2'" H N N 30
DA "H2''" H N N 31
DA "H1'" H N N 32
DA H8 H N N 33
DA H61 H N N 34
DA H62 H N N 35
DA H2 H N N 36
DC OP3 O N N 37
DC P P N N 38
DC OP1 O N N 39
DC OP2 O N N 40
DC "O5'" O N N 41
DC "C5'" C N N 42
DC "C4'" C N R 43
DC "O4'" O N N 44
DC "C3'" C N S 45
DC "O3'" O N N 46
DC "C2'" C N N 47
DC "C1'" C N R 48
DC N1 N N N 49
DC C2 C N N 50
DC O2 O N N 51
DC N3 N N N 52
DC C4 C N N 53
DC N4 N N N 54
DC C5 C N N 55
DC C6 C N N 56
DC HOP3 H N N 57
DC HOP2 H N N 58
DC "H5'" H N N 59
DC "H5''" H N N 60
DC "H4'" H N N 61
DC "H3'" H N N 62
DC "HO3'" H N N 63
DC "H2'" H N N 64
DC "H2''" H N N 65
DC "H1'" H N N 66
DC H41 H N N 67
DC H42 H N N 68
DC H5 H N N 69
DC H6 H N N 70
DG OP3 O N N 71
DG P P N N 72
DG OP1 O N N 73
DG OP2 O N N 74
DG "O5'" O N N 75
DG "C5'" C N N 76
DG "C4'" C N R 77
DG "O4'" O N N 78
DG "C3'" C N S 79
DG "O3'" O N N 80
DG "C2'" C N N 81
DG "C1'" C N R 82
DG N9 N Y N 83
DG C8 C Y N 84
DG N7 N Y N 85
DG C5 C Y N 86
DG C6 C N N 87
DG O6 O N N 88
DG N1 N N N 89
DG C2 C N N 90
DG N2 N N N 91
DG N3 N N N 92
DG C4 C Y N 93
DG HOP3 H N N 94
DG HOP2 H N N 95
DG "H5'" H N N 96
DG "H5''" H N N 97
DG "H4'" H N N 98
DG "H3'" H N N 99
DG "HO3'" H N N 100
DG "H2'" H N N 101
DG "H2''" H N N 102
DG "H1'" H N N 103
DG H8 H N N 104
DG H1 H N N 105
DG H21 H N N 106
DG H22 H N N 107
DM1 C1 C Y N 108
DM1 C2 C Y N 109
DM1 C3 C Y N 110
DM1 C4 C Y N 111
DM1 O4 O N N 112
DM1 C5 C Y N 113
DM1 C6 C N N 114
DM1 O6 O N N 115
DM1 C7 C Y N 116
DM1 C8 C Y N 117
DM1 O8 O N N 118
DM1 C9 C Y N 119
DM1 C10 C N S 120
DM1 O10 O N N 121
DM1 C11 C N N 122
DM1 C12 C N S 123
DM1 O12 O N N 124
DM1 C13 C N N 125
DM1 O13 O N N 126
DM1 C14 C N N 127
DM1 C15 C N N 128
DM1 C16 C Y N 129
DM1 C17 C Y N 130
DM1 O17 O N N 131
DM1 C18 C Y N 132
DM1 C19 C N N 133
DM1 O19 O N N 134
DM1 C20 C Y N 135
DM1 C21 C N N 136
DM1 "C1'" C N R 137
DM1 "C2'" C N N 138
DM1 "C3'" C N S 139
DM1 "N3'" N N N 140
DM1 "C4'" C N S 141
DM1 "O4'" O N N 142
DM1 "C5'" C N S 143
DM1 "O5'" O N N 144
DM1 "C6'" C N N 145
DM1 H1 H N N 146
DM1 H2 H N N 147
DM1 H3 H N N 148
DM1 HO8 H N N 149
DM1 H10 H N N 150
DM1 H111 H N N 151
DM1 H112 H N N 152
DM1 HO12 H N N 153
DM1 H141 H N N 154
DM1 H142 H N N 155
DM1 H143 H N N 156
DM1 H151 H N N 157
DM1 H152 H N N 158
DM1 HO17 H N N 159
DM1 H211 H N N 160
DM1 H212 H N N 161
DM1 H213 H N N 162
DM1 "H1'" H N N 163
DM1 "H2'1" H N N 164
DM1 "H2'2" H N N 165
DM1 "H3'" H N N 166
DM1 "HN'1" H N N 167
DM1 "HN'2" H N N 168
DM1 "H4'" H N N 169
DM1 "HO4'" H N N 170
DM1 "H5'" H N N 171
DM1 "H6'1" H N N 172
DM1 "H6'2" H N N 173
DM1 "H6'3" H N N 174
DT OP3 O N N 175
DT P P N N 176
DT OP1 O N N 177
DT OP2 O N N 178
DT "O5'" O N N 179
DT "C5'" C N N 180
DT "C4'" C N R 181
DT "O4'" O N N 182
DT "C3'" C N S 183
DT "O3'" O N N 184
DT "C2'" C N N 185
DT "C1'" C N R 186
DT N1 N N N 187
DT C2 C N N 188
DT O2 O N N 189
DT N3 N N N 190
DT C4 C N N 191
DT O4 O N N 192
DT C5 C N N 193
DT C7 C N N 194
DT C6 C N N 195
DT HOP3 H N N 196
DT HOP2 H N N 197
DT "H5'" H N N 198
DT "H5''" H N N 199
DT "H4'" H N N 200
DT "H3'" H N N 201
DT "HO3'" H N N 202
DT "H2'" H N N 203
DT "H2''" H N N 204
DT "H1'" H N N 205
DT H3 H N N 206
DT H71 H N N 207
DT H72 H N N 208
DT H73 H N N 209
DT H6 H N N 210
HOH O O N N 211
HOH H1 H N N 212
HOH H2 H N N 213
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DA OP3 P sing N N 1
DA OP3 HOP3 sing N N 2
DA P OP1 doub N N 3
DA P OP2 sing N N 4
DA P "O5'" sing N N 5
DA OP2 HOP2 sing N N 6
DA "O5'" "C5'" sing N N 7
DA "C5'" "C4'" sing N N 8
DA "C5'" "H5'" sing N N 9
DA "C5'" "H5''" sing N N 10
DA "C4'" "O4'" sing N N 11
DA "C4'" "C3'" sing N N 12
DA "C4'" "H4'" sing N N 13
DA "O4'" "C1'" sing N N 14
DA "C3'" "O3'" sing N N 15
DA "C3'" "C2'" sing N N 16
DA "C3'" "H3'" sing N N 17
DA "O3'" "HO3'" sing N N 18
DA "C2'" "C1'" sing N N 19
DA "C2'" "H2'" sing N N 20
DA "C2'" "H2''" sing N N 21
DA "C1'" N9 sing N N 22
DA "C1'" "H1'" sing N N 23
DA N9 C8 sing Y N 24
DA N9 C4 sing Y N 25
DA C8 N7 doub Y N 26
DA C8 H8 sing N N 27
DA N7 C5 sing Y N 28
DA C5 C6 sing Y N 29
DA C5 C4 doub Y N 30
DA C6 N6 sing N N 31
DA C6 N1 doub Y N 32
DA N6 H61 sing N N 33
DA N6 H62 sing N N 34
DA N1 C2 sing Y N 35
DA C2 N3 doub Y N 36
DA C2 H2 sing N N 37
DA N3 C4 sing Y N 38
DC OP3 P sing N N 39
DC OP3 HOP3 sing N N 40
DC P OP1 doub N N 41
DC P OP2 sing N N 42
DC P "O5'" sing N N 43
DC OP2 HOP2 sing N N 44
DC "O5'" "C5'" sing N N 45
DC "C5'" "C4'" sing N N 46
DC "C5'" "H5'" sing N N 47
DC "C5'" "H5''" sing N N 48
DC "C4'" "O4'" sing N N 49
DC "C4'" "C3'" sing N N 50
DC "C4'" "H4'" sing N N 51
DC "O4'" "C1'" sing N N 52
DC "C3'" "O3'" sing N N 53
DC "C3'" "C2'" sing N N 54
DC "C3'" "H3'" sing N N 55
DC "O3'" "HO3'" sing N N 56
DC "C2'" "C1'" sing N N 57
DC "C2'" "H2'" sing N N 58
DC "C2'" "H2''" sing N N 59
DC "C1'" N1 sing N N 60
DC "C1'" "H1'" sing N N 61
DC N1 C2 sing N N 62
DC N1 C6 sing N N 63
DC C2 O2 doub N N 64
DC C2 N3 sing N N 65
DC N3 C4 doub N N 66
DC C4 N4 sing N N 67
DC C4 C5 sing N N 68
DC N4 H41 sing N N 69
DC N4 H42 sing N N 70
DC C5 C6 doub N N 71
DC C5 H5 sing N N 72
DC C6 H6 sing N N 73
DG OP3 P sing N N 74
DG OP3 HOP3 sing N N 75
DG P OP1 doub N N 76
DG P OP2 sing N N 77
DG P "O5'" sing N N 78
DG OP2 HOP2 sing N N 79
DG "O5'" "C5'" sing N N 80
DG "C5'" "C4'" sing N N 81
DG "C5'" "H5'" sing N N 82
DG "C5'" "H5''" sing N N 83
DG "C4'" "O4'" sing N N 84
DG "C4'" "C3'" sing N N 85
DG "C4'" "H4'" sing N N 86
DG "O4'" "C1'" sing N N 87
DG "C3'" "O3'" sing N N 88
DG "C3'" "C2'" sing N N 89
DG "C3'" "H3'" sing N N 90
DG "O3'" "HO3'" sing N N 91
DG "C2'" "C1'" sing N N 92
DG "C2'" "H2'" sing N N 93
DG "C2'" "H2''" sing N N 94
DG "C1'" N9 sing N N 95
DG "C1'" "H1'" sing N N 96
DG N9 C8 sing Y N 97
DG N9 C4 sing Y N 98
DG C8 N7 doub Y N 99
DG C8 H8 sing N N 100
DG N7 C5 sing Y N 101
DG C5 C6 sing N N 102
DG C5 C4 doub Y N 103
DG C6 O6 doub N N 104
DG C6 N1 sing N N 105
DG N1 C2 sing N N 106
DG N1 H1 sing N N 107
DG C2 N2 sing N N 108
DG C2 N3 doub N N 109
DG N2 H21 sing N N 110
DG N2 H22 sing N N 111
DG N3 C4 sing N N 112
DM1 C1 C2 doub Y N 113
DM1 C1 C20 sing Y N 114
DM1 C1 H1 sing N N 115
DM1 C2 C3 sing Y N 116
DM1 C2 H2 sing N N 117
DM1 C3 C4 doub Y N 118
DM1 C3 H3 sing N N 119
DM1 C4 O4 sing N N 120
DM1 C4 C5 sing Y N 121
DM1 O4 C21 sing N N 122
DM1 C5 C6 sing N N 123
DM1 C5 C20 doub Y N 124
DM1 C6 O6 doub N N 125
DM1 C6 C7 sing N N 126
DM1 C7 C8 doub Y N 127
DM1 C7 C18 sing Y N 128
DM1 C8 O8 sing N N 129
DM1 C8 C9 sing Y N 130
DM1 O8 HO8 sing N N 131
DM1 C9 C10 sing N N 132
DM1 C9 C16 doub Y N 133
DM1 C10 O10 sing N N 134
DM1 C10 C11 sing N N 135
DM1 C10 H10 sing N N 136
DM1 O10 "C1'" sing N N 137
DM1 C11 C12 sing N N 138
DM1 C11 H111 sing N N 139
DM1 C11 H112 sing N N 140
DM1 C12 O12 sing N N 141
DM1 C12 C13 sing N N 142
DM1 C12 C15 sing N N 143
DM1 O12 HO12 sing N N 144
DM1 C13 O13 doub N N 145
DM1 C13 C14 sing N N 146
DM1 C14 H141 sing N N 147
DM1 C14 H142 sing N N 148
DM1 C14 H143 sing N N 149
DM1 C15 C16 sing N N 150
DM1 C15 H151 sing N N 151
DM1 C15 H152 sing N N 152
DM1 C16 C17 sing Y N 153
DM1 C17 O17 sing N N 154
DM1 C17 C18 doub Y N 155
DM1 O17 HO17 sing N N 156
DM1 C18 C19 sing N N 157
DM1 C19 O19 doub N N 158
DM1 C19 C20 sing N N 159
DM1 C21 H211 sing N N 160
DM1 C21 H212 sing N N 161
DM1 C21 H213 sing N N 162
DM1 "C1'" "C2'" sing N N 163
DM1 "C1'" "O5'" sing N N 164
DM1 "C1'" "H1'" sing N N 165
DM1 "C2'" "C3'" sing N N 166
DM1 "C2'" "H2'1" sing N N 167
DM1 "C2'" "H2'2" sing N N 168
DM1 "C3'" "N3'" sing N N 169
DM1 "C3'" "C4'" sing N N 170
DM1 "C3'" "H3'" sing N N 171
DM1 "N3'" "HN'1" sing N N 172
DM1 "N3'" "HN'2" sing N N 173
DM1 "C4'" "O4'" sing N N 174
DM1 "C4'" "C5'" sing N N 175
DM1 "C4'" "H4'" sing N N 176
DM1 "O4'" "HO4'" sing N N 177
DM1 "C5'" "O5'" sing N N 178
DM1 "C5'" "C6'" sing N N 179
DM1 "C5'" "H5'" sing N N 180
DM1 "C6'" "H6'1" sing N N 181
DM1 "C6'" "H6'2" sing N N 182
DM1 "C6'" "H6'3" sing N N 183
DT OP3 P sing N N 184
DT OP3 HOP3 sing N N 185
DT P OP1 doub N N 186
DT P OP2 sing N N 187
DT P "O5'" sing N N 188
DT OP2 HOP2 sing N N 189
DT "O5'" "C5'" sing N N 190
DT "C5'" "C4'" sing N N 191
DT "C5'" "H5'" sing N N 192
DT "C5'" "H5''" sing N N 193
DT "C4'" "O4'" sing N N 194
DT "C4'" "C3'" sing N N 195
DT "C4'" "H4'" sing N N 196
DT "O4'" "C1'" sing N N 197
DT "C3'" "O3'" sing N N 198
DT "C3'" "C2'" sing N N 199
DT "C3'" "H3'" sing N N 200
DT "O3'" "HO3'" sing N N 201
DT "C2'" "C1'" sing N N 202
DT "C2'" "H2'" sing N N 203
DT "C2'" "H2''" sing N N 204
DT "C1'" N1 sing N N 205
DT "C1'" "H1'" sing N N 206
DT N1 C2 sing N N 207
DT N1 C6 sing N N 208
DT C2 O2 doub N N 209
DT C2 N3 sing N N 210
DT N3 C4 sing N N 211
DT N3 H3 sing N N 212
DT C4 O4 doub N N 213
DT C4 C5 sing N N 214
DT C5 C7 sing N N 215
DT C5 C6 doub N N 216
DT C7 H71 sing N N 217
DT C7 H72 sing N N 218
DT C7 H73 sing N N 219
DT C6 H6 sing N N 220
HOH O H1 sing N N 221
HOH O H2 sing N N 222
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
152D 'double helix'
152D 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DC 1 1_555 A DG 6 8_665 0.157 -0.112 -0.202 9.586 2.842 -0.683 1 A_DC1:DG6_A A 1 ? A 6 ? 19 1
1 A DG 2 1_555 A DC 5 8_665 -0.130 -0.058 -0.590 -21.595 -0.157 0.808 2 A_DG2:DC5_A A 2 ? A 5 ? 19 1
1 A DA 3 1_555 A DT 4 8_665 0.012 -0.164 0.184 -6.261 -1.449 3.284 3 A_DA3:DT4_A A 3 ? A 4 ? 20 1
1 A DT 4 1_555 A DA 3 8_665 -0.012 -0.164 0.184 6.261 -1.449 3.284 4 A_DT4:DA3_A A 4 ? A 3 ? 20 1
1 A DC 5 1_555 A DG 2 8_665 0.130 -0.058 -0.590 21.595 -0.157 0.808 5 A_DC5:DG2_A A 5 ? A 2 ? 19 1
1 A DG 6 1_555 A DC 1 8_665 -0.157 -0.112 -0.202 -9.586 2.842 -0.683 6 A_DG6:DC1_A A 6 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DC 1 1_555 A DG 6 8_665 A DG 2 1_555 A DC 5 8_665 1.381 1.269 7.153 3.281 -1.840 35.749 2.634 -1.210 7.175 -2.988 -5.326
35.940 1 AA_DC1DG2:DC5DG6_AA A 1 ? A 6 ? A 2 ? A 5 ?
1 A DG 2 1_555 A DC 5 8_665 A DA 3 1_555 A DT 4 8_665 -1.277 0.419 2.923 -8.373 -1.294 30.024 1.013 0.869 3.136 -2.437 15.771
31.170 2 AA_DG2DA3:DT4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ?
1 A DA 3 1_555 A DT 4 8_665 A DT 4 1_555 A DA 3 8_665 0.000 -0.853 3.194 0.000 5.172 32.738 -2.328 0.000 3.027 9.105 0.000
33.133 3 AA_DA3DT4:DA3DT4_AA A 3 ? A 4 ? A 4 ? A 3 ?
1 A DT 4 1_555 A DA 3 8_665 A DC 5 1_555 A DG 2 8_665 1.277 0.419 2.923 8.373 -1.294 30.024 1.013 -0.869 3.136 -2.437 -15.771
31.170 4 AA_DT4DC5:DG2DA3_AA A 4 ? A 3 ? A 5 ? A 2 ?
1 A DC 5 1_555 A DG 2 8_665 A DG 6 1_555 A DC 1 8_665 -1.381 1.269 7.153 -3.280 -1.840 35.749 2.634 1.210 7.175 -2.988 5.326
35.940 5 AA_DC5DG6:DC1DG2_AA A 5 ? A 2 ? A 6 ? A 1 ?
#
_atom_sites.entry_id 152D
_atom_sites.fract_transf_matrix[1][1] 0.035907
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.035907
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.019109
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DC A 1 1 ? 9.402 20.159 22.575 1.00 7.21 ? 1 DC A "O5'" 1
ATOM 2 C "C5'" . DC A 1 1 ? 9.725 21.188 23.423 1.00 5.99 ? 1 DC A "C5'" 1
ATOM 3 C "C4'" . DC A 1 1 ? 11.126 21.146 23.863 1.00 5.78 ? 1 DC A "C4'" 1
ATOM 4 O "O4'" . DC A 1 1 ? 11.377 19.997 24.733 1.00 5.82 ? 1 DC A "O4'" 1
ATOM 5 C "C3'" . DC A 1 1 ? 12.207 21.038 22.712 1.00 5.66 ? 1 DC A "C3'" 1
ATOM 6 O "O3'" . DC A 1 1 ? 13.306 21.799 23.058 1.00 5.19 ? 1 DC A "O3'" 1
ATOM 7 C "C2'" . DC A 1 1 ? 12.501 19.515 22.662 1.00 5.84 ? 1 DC A "C2'" 1
ATOM 8 C "C1'" . DC A 1 1 ? 12.455 19.165 24.213 1.00 5.27 ? 1 DC A "C1'" 1
ATOM 9 N N1 . DC A 1 1 ? 11.986 17.751 24.326 1.00 4.80 ? 1 DC A N1 1
ATOM 10 C C2 . DC A 1 1 ? 12.962 16.785 24.455 1.00 4.51 ? 1 DC A C2 1
ATOM 11 O O2 . DC A 1 1 ? 14.150 17.068 24.490 1.00 5.08 ? 1 DC A O2 1
ATOM 12 N N3 . DC A 1 1 ? 12.526 15.500 24.568 1.00 4.65 ? 1 DC A N3 1
ATOM 13 C C4 . DC A 1 1 ? 11.215 15.091 24.512 1.00 4.96 ? 1 DC A C4 1
ATOM 14 N N4 . DC A 1 1 ? 10.903 13.757 24.529 1.00 4.91 ? 1 DC A N4 1
ATOM 15 C C5 . DC A 1 1 ? 10.240 16.122 24.369 1.00 4.61 ? 1 DC A C5 1
ATOM 16 C C6 . DC A 1 1 ? 10.650 17.373 24.236 1.00 4.55 ? 1 DC A C6 1
ATOM 17 P P . DG A 1 2 ? 13.887 22.924 22.131 1.00 6.74 ? 2 DG A P 1
ATOM 18 O OP1 . DG A 1 2 ? 14.896 23.692 22.856 1.00 6.96 ? 2 DG A OP1 1
ATOM 19 O OP2 . DG A 1 2 ? 12.795 23.592 21.545 1.00 7.20 ? 2 DG A OP2 1
ATOM 20 O "O5'" . DG A 1 2 ? 14.613 22.138 20.886 1.00 6.84 ? 2 DG A "O5'" 1
ATOM 21 C "C5'" . DG A 1 2 ? 15.775 21.353 21.275 1.00 6.92 ? 2 DG A "C5'" 1
ATOM 22 C "C4'" . DG A 1 2 ? 16.125 20.559 19.998 1.00 7.32 ? 2 DG A "C4'" 1
ATOM 23 O "O4'" . DG A 1 2 ? 15.161 19.481 19.963 1.00 6.63 ? 2 DG A "O4'" 1
ATOM 24 C "C3'" . DG A 1 2 ? 15.959 21.337 18.674 1.00 8.13 ? 2 DG A "C3'" 1
ATOM 25 O "O3'" . DG A 1 2 ? 17.026 20.918 17.825 1.00 10.37 ? 2 DG A "O3'" 1
ATOM 26 C "C2'" . DG A 1 2 ? 14.643 20.785 18.005 1.00 7.05 ? 2 DG A "C2'" 1
ATOM 27 C "C1'" . DG A 1 2 ? 14.780 19.276 18.587 1.00 6.64 ? 2 DG A "C1'" 1
ATOM 28 N N9 . DG A 1 2 ? 13.616 18.487 18.444 1.00 6.53 ? 2 DG A N9 1
ATOM 29 C C8 . DG A 1 2 ? 12.313 18.854 18.420 1.00 6.46 ? 2 DG A C8 1
ATOM 30 N N7 . DG A 1 2 ? 11.451 17.828 18.247 1.00 6.11 ? 2 DG A N7 1
ATOM 31 C C5 . DG A 1 2 ? 12.302 16.759 18.104 1.00 5.80 ? 2 DG A C5 1
ATOM 32 C C6 . DG A 1 2 ? 12.047 15.378 17.897 1.00 5.84 ? 2 DG A C6 1
ATOM 33 O O6 . DG A 1 2 ? 10.904 14.846 17.797 1.00 5.84 ? 2 DG A O6 1
ATOM 34 N N1 . DG A 1 2 ? 13.084 14.538 17.940 1.00 5.19 ? 2 DG A N1 1
ATOM 35 C C2 . DG A 1 2 ? 14.330 15.021 18.093 1.00 5.40 ? 2 DG A C2 1
ATOM 36 N N2 . DG A 1 2 ? 15.301 14.239 18.114 1.00 5.73 ? 2 DG A N2 1
ATOM 37 N N3 . DG A 1 2 ? 14.720 16.295 18.269 1.00 5.84 ? 2 DG A N3 1
ATOM 38 C C4 . DG A 1 2 ? 13.618 17.091 18.299 1.00 5.72 ? 2 DG A C4 1
ATOM 39 P P . DA A 1 3 ? 17.862 21.860 16.888 1.00 13.42 ? 3 DA A P 1
ATOM 40 O OP1 . DA A 1 3 ? 18.572 22.718 17.746 1.00 12.14 ? 3 DA A OP1 1
ATOM 41 O OP2 . DA A 1 3 ? 17.019 22.368 15.783 1.00 13.24 ? 3 DA A OP2 1
ATOM 42 O "O5'" . DA A 1 3 ? 19.092 20.920 16.329 1.00 10.62 ? 3 DA A "O5'" 1
ATOM 43 C "C5'" . DA A 1 3 ? 19.884 20.368 17.301 1.00 8.71 ? 3 DA A "C5'" 1
ATOM 44 C "C4'" . DA A 1 3 ? 20.100 18.951 16.719 1.00 6.88 ? 3 DA A "C4'" 1
ATOM 45 O "O4'" . DA A 1 3 ? 18.880 18.192 16.910 1.00 5.16 ? 3 DA A "O4'" 1
ATOM 46 C "C3'" . DA A 1 3 ? 20.495 18.843 15.218 1.00 7.60 ? 3 DA A "C3'" 1
ATOM 47 O "O3'" . DA A 1 3 ? 21.609 18.120 15.114 1.00 8.38 ? 3 DA A "O3'" 1
ATOM 48 C "C2'" . DA A 1 3 ? 19.308 18.145 14.611 1.00 6.89 ? 3 DA A "C2'" 1
ATOM 49 C "C1'" . DA A 1 3 ? 18.719 17.295 15.850 1.00 5.97 ? 3 DA A "C1'" 1
ATOM 50 N N9 . DA A 1 3 ? 17.293 17.183 15.615 1.00 4.95 ? 3 DA A N9 1
ATOM 51 C C8 . DA A 1 3 ? 16.403 18.177 15.554 1.00 4.20 ? 3 DA A C8 1
ATOM 52 N N7 . DA A 1 3 ? 15.171 17.760 15.271 1.00 4.48 ? 3 DA A N7 1
ATOM 53 C C5 . DA A 1 3 ? 15.314 16.405 15.163 1.00 3.83 ? 3 DA A C5 1
ATOM 54 C C6 . DA A 1 3 ? 14.355 15.371 14.869 1.00 3.43 ? 3 DA A C6 1
ATOM 55 N N6 . DA A 1 3 ? 13.056 15.620 14.707 1.00 3.45 ? 3 DA A N6 1
ATOM 56 N N1 . DA A 1 3 ? 14.854 14.112 14.772 1.00 3.81 ? 3 DA A N1 1
ATOM 57 C C2 . DA A 1 3 ? 16.145 13.881 15.005 1.00 3.43 ? 3 DA A C2 1
ATOM 58 N N3 . DA A 1 3 ? 17.104 14.765 15.263 1.00 3.38 ? 3 DA A N3 1
ATOM 59 C C4 . DA A 1 3 ? 16.603 16.006 15.336 1.00 3.85 ? 3 DA A C4 1
ATOM 60 P P . DT A 1 4 ? 22.492 17.754 13.849 1.00 10.67 ? 4 DT A P 1
ATOM 61 O OP1 . DT A 1 4 ? 23.705 17.310 14.468 1.00 11.17 ? 4 DT A OP1 1
ATOM 62 O OP2 . DT A 1 4 ? 22.429 18.822 12.910 1.00 11.20 ? 4 DT A OP2 1
ATOM 63 O "O5'" . DT A 1 4 ? 21.915 16.358 13.171 1.00 8.98 ? 4 DT A "O5'" 1
ATOM 64 C "C5'" . DT A 1 4 ? 22.088 15.179 13.862 1.00 8.22 ? 4 DT A "C5'" 1
ATOM 65 C "C4'" . DT A 1 4 ? 21.520 14.083 12.927 1.00 6.94 ? 4 DT A "C4'" 1
ATOM 66 O "O4'" . DT A 1 4 ? 20.122 14.190 12.920 1.00 6.44 ? 4 DT A "O4'" 1
ATOM 67 C "C3'" . DT A 1 4 ? 22.005 14.196 11.427 1.00 7.41 ? 4 DT A "C3'" 1
ATOM 68 O "O3'" . DT A 1 4 ? 22.583 13.026 11.082 1.00 7.98 ? 4 DT A "O3'" 1
ATOM 69 C "C2'" . DT A 1 4 ? 20.683 14.429 10.651 1.00 6.43 ? 4 DT A "C2'" 1
ATOM 70 C "C1'" . DT A 1 4 ? 19.625 13.931 11.595 1.00 6.42 ? 4 DT A "C1'" 1
ATOM 71 N N1 . DT A 1 4 ? 18.312 14.678 11.584 1.00 7.09 ? 4 DT A N1 1
ATOM 72 C C2 . DT A 1 4 ? 17.176 13.919 11.474 1.00 6.48 ? 4 DT A C2 1
ATOM 73 O O2 . DT A 1 4 ? 17.176 12.714 11.400 1.00 7.01 ? 4 DT A O2 1
ATOM 74 N N3 . DT A 1 4 ? 16.003 14.599 11.504 1.00 6.10 ? 4 DT A N3 1
ATOM 75 C C4 . DT A 1 4 ? 15.859 15.975 11.639 1.00 6.47 ? 4 DT A C4 1
ATOM 76 O O4 . DT A 1 4 ? 14.720 16.452 11.658 1.00 6.23 ? 4 DT A O4 1
ATOM 77 C C5 . DT A 1 4 ? 17.062 16.735 11.756 1.00 6.71 ? 4 DT A C5 1
ATOM 78 C C7 . DT A 1 4 ? 17.081 18.229 11.920 1.00 6.43 ? 4 DT A C7 1
ATOM 79 C C6 . DT A 1 4 ? 18.223 16.059 11.740 1.00 7.07 ? 4 DT A C6 1
ATOM 80 P P . DC A 1 5 ? 23.438 12.796 9.724 1.00 9.16 ? 5 DC A P 1
ATOM 81 O OP1 . DC A 1 5 ? 24.017 11.532 9.987 1.00 9.88 ? 5 DC A OP1 1
ATOM 82 O OP2 . DC A 1 5 ? 24.044 13.964 9.291 1.00 9.23 ? 5 DC A OP2 1
ATOM 83 O "O5'" . DC A 1 5 ? 22.263 12.303 8.631 1.00 8.84 ? 5 DC A "O5'" 1
ATOM 84 C "C5'" . DC A 1 5 ? 21.604 11.142 8.821 1.00 7.40 ? 5 DC A "C5'" 1
ATOM 85 C "C4'" . DC A 1 5 ? 20.379 11.230 7.846 1.00 7.69 ? 5 DC A "C4'" 1
ATOM 86 O "O4'" . DC A 1 5 ? 19.433 12.146 8.436 1.00 7.23 ? 5 DC A "O4'" 1
ATOM 87 C "C3'" . DC A 1 5 ? 20.735 11.764 6.459 1.00 7.99 ? 5 DC A "C3'" 1
ATOM 88 O "O3'" . DC A 1 5 ? 20.120 10.965 5.483 1.00 8.69 ? 5 DC A "O3'" 1
ATOM 89 C "C2'" . DC A 1 5 ? 20.167 13.187 6.355 1.00 7.61 ? 5 DC A "C2'" 1
ATOM 90 C "C1'" . DC A 1 5 ? 18.989 12.953 7.413 1.00 7.36 ? 5 DC A "C1'" 1
ATOM 91 N N1 . DC A 1 5 ? 18.255 14.197 7.756 1.00 6.34 ? 5 DC A N1 1
ATOM 92 C C2 . DC A 1 5 ? 16.933 13.977 8.089 1.00 6.66 ? 5 DC A C2 1
ATOM 93 O O2 . DC A 1 5 ? 16.396 12.890 8.172 1.00 6.04 ? 5 DC A O2 1
ATOM 94 N N3 . DC A 1 5 ? 16.205 15.111 8.362 1.00 6.85 ? 5 DC A N3 1
ATOM 95 C C4 . DC A 1 5 ? 16.694 16.394 8.359 1.00 6.69 ? 5 DC A C4 1
ATOM 96 N N4 . DC A 1 5 ? 15.795 17.372 8.589 1.00 5.98 ? 5 DC A N4 1
ATOM 97 C C5 . DC A 1 5 ? 18.068 16.582 8.005 1.00 6.61 ? 5 DC A C5 1
ATOM 98 C C6 . DC A 1 5 ? 18.788 15.479 7.755 1.00 7.02 ? 5 DC A C6 1
ATOM 99 P P . DG A 1 6 ? 20.940 9.871 4.658 1.00 9.80 ? 6 DG A P 1
ATOM 100 O OP1 . DG A 1 6 ? 21.451 8.973 5.613 1.00 10.70 ? 6 DG A OP1 1
ATOM 101 O OP2 . DG A 1 6 ? 21.790 10.576 3.710 1.00 9.42 ? 6 DG A OP2 1
ATOM 102 O "O5'" . DG A 1 6 ? 19.780 9.012 3.914 1.00 8.23 ? 6 DG A "O5'" 1
ATOM 103 C "C5'" . DG A 1 6 ? 18.998 8.117 4.554 1.00 7.35 ? 6 DG A "C5'" 1
ATOM 104 C "C4'" . DG A 1 6 ? 17.941 7.567 3.583 1.00 6.70 ? 6 DG A "C4'" 1
ATOM 105 O "O4'" . DG A 1 6 ? 17.063 8.587 3.152 1.00 5.78 ? 6 DG A "O4'" 1
ATOM 106 C "C3'" . DG A 1 6 ? 18.507 7.011 2.241 1.00 5.87 ? 6 DG A "C3'" 1
ATOM 107 O "O3'" . DG A 1 6 ? 17.630 5.984 1.871 1.00 6.25 ? 6 DG A "O3'" 1
ATOM 108 C "C2'" . DG A 1 6 ? 18.528 8.250 1.358 1.00 5.47 ? 6 DG A "C2'" 1
ATOM 109 C "C1'" . DG A 1 6 ? 17.207 8.987 1.759 1.00 5.38 ? 6 DG A "C1'" 1
ATOM 110 N N9 . DG A 1 6 ? 17.265 10.389 1.690 1.00 5.58 ? 6 DG A N9 1
ATOM 111 C C8 . DG A 1 6 ? 18.307 11.223 1.782 1.00 5.86 ? 6 DG A C8 1
ATOM 112 N N7 . DG A 1 6 ? 17.994 12.512 1.763 1.00 6.45 ? 6 DG A N7 1
ATOM 113 C C5 . DG A 1 6 ? 16.639 12.505 1.677 1.00 5.60 ? 6 DG A C5 1
ATOM 114 C C6 . DG A 1 6 ? 15.676 13.580 1.587 1.00 6.05 ? 6 DG A C6 1
ATOM 115 O O6 . DG A 1 6 ? 15.971 14.816 1.593 1.00 5.80 ? 6 DG A O6 1
ATOM 116 N N1 . DG A 1 6 ? 14.389 13.232 1.536 1.00 5.51 ? 6 DG A N1 1
ATOM 117 C C2 . DG A 1 6 ? 14.041 11.961 1.500 1.00 5.78 ? 6 DG A C2 1
ATOM 118 N N2 . DG A 1 6 ? 12.827 11.633 1.418 1.00 5.90 ? 6 DG A N2 1
ATOM 119 N N3 . DG A 1 6 ? 14.826 10.866 1.537 1.00 5.26 ? 6 DG A N3 1
ATOM 120 C C4 . DG A 1 6 ? 16.130 11.250 1.623 1.00 5.82 ? 6 DG A C4 1
HETATM 121 C C1 . DM1 B 2 . ? 15.137 18.308 4.882 1.00 7.09 ? 7 DM1 A C1 1
HETATM 122 C C2 . DM1 B 2 . ? 16.344 19.047 4.902 1.00 6.02 ? 7 DM1 A C2 1
HETATM 123 C C3 . DM1 B 2 . ? 17.550 18.370 4.878 1.00 6.39 ? 7 DM1 A C3 1
HETATM 124 C C4 . DM1 B 2 . ? 17.557 16.958 4.868 1.00 5.38 ? 7 DM1 A C4 1
HETATM 125 O O4 . DM1 B 2 . ? 18.793 16.346 4.847 1.00 6.02 ? 7 DM1 A O4 1
HETATM 126 C C5 . DM1 B 2 . ? 16.362 16.238 4.837 1.00 5.67 ? 7 DM1 A C5 1
HETATM 127 C C6 . DM1 B 2 . ? 16.333 14.825 4.830 1.00 5.87 ? 7 DM1 A C6 1
HETATM 128 O O6 . DM1 B 2 . ? 17.498 14.126 4.734 1.00 4.78 ? 7 DM1 A O6 1
HETATM 129 C C7 . DM1 B 2 . ? 15.114 14.120 4.846 1.00 5.47 ? 7 DM1 A C7 1
HETATM 130 C C8 . DM1 B 2 . ? 15.086 12.706 4.798 1.00 5.34 ? 7 DM1 A C8 1
HETATM 131 O O8 . DM1 B 2 . ? 16.241 11.946 4.824 1.00 5.08 ? 7 DM1 A O8 1
HETATM 132 C C9 . DM1 B 2 . ? 13.849 12.027 4.758 1.00 5.07 ? 7 DM1 A C9 1
HETATM 133 C C10 . DM1 B 2 . ? 13.906 10.542 4.818 1.00 5.43 ? 7 DM1 A C10 1
HETATM 134 O O10 . DM1 B 2 . ? 14.491 10.294 6.146 1.00 5.05 ? 7 DM1 A O10 1
HETATM 135 C C11 . DM1 B 2 . ? 12.622 9.781 4.505 1.00 5.21 ? 7 DM1 A C11 1
HETATM 136 C C12 . DM1 B 2 . ? 11.448 10.538 5.388 1.00 5.31 ? 7 DM1 A C12 1
HETATM 137 O O12 . DM1 B 2 . ? 11.587 10.721 6.834 1.00 4.27 ? 7 DM1 A O12 1
HETATM 138 C C13 . DM1 B 2 . ? 10.181 9.724 5.082 1.00 6.03 ? 7 DM1 A C13 1
HETATM 139 O O13 . DM1 B 2 . ? 9.428 10.087 4.050 1.00 6.34 ? 7 DM1 A O13 1
HETATM 140 C C14 . DM1 B 2 . ? 9.835 8.537 5.938 1.00 5.46 ? 7 DM1 A C14 1
HETATM 141 C C15 . DM1 B 2 . ? 11.330 11.981 4.769 1.00 4.65 ? 7 DM1 A C15 1
HETATM 142 C C16 . DM1 B 2 . ? 12.661 12.710 4.789 1.00 5.22 ? 7 DM1 A C16 1
HETATM 143 C C17 . DM1 B 2 . ? 12.675 14.129 4.825 1.00 5.32 ? 7 DM1 A C17 1
HETATM 144 O O17 . DM1 B 2 . ? 11.507 14.789 4.756 1.00 5.11 ? 7 DM1 A O17 1
HETATM 145 C C18 . DM1 B 2 . ? 13.904 14.822 4.834 1.00 5.55 ? 7 DM1 A C18 1
HETATM 146 C C19 . DM1 B 2 . ? 13.892 16.238 4.860 1.00 5.93 ? 7 DM1 A C19 1
HETATM 147 O O19 . DM1 B 2 . ? 12.748 16.875 4.877 1.00 6.80 ? 7 DM1 A O19 1
HETATM 148 C C20 . DM1 B 2 . ? 15.138 16.915 4.866 1.00 6.28 ? 7 DM1 A C20 1
HETATM 149 C C21 . DM1 B 2 . ? 20.055 17.067 4.870 1.00 6.16 ? 7 DM1 A C21 1
HETATM 150 C "C1'" . DM1 B 2 . ? 15.439 9.277 6.360 1.00 5.58 ? 7 DM1 A "C1'" 1
HETATM 151 C "C2'" . DM1 B 2 . ? 16.627 9.760 7.290 1.00 5.38 ? 7 DM1 A "C2'" 1
HETATM 152 C "C3'" . DM1 B 2 . ? 15.956 9.840 8.724 1.00 6.72 ? 7 DM1 A "C3'" 1
HETATM 153 N "N3'" . DM1 B 2 . ? 17.054 10.203 9.675 1.00 6.29 ? 7 DM1 A "N3'" 1
HETATM 154 C "C4'" . DM1 B 2 . ? 15.247 8.517 9.174 1.00 6.32 ? 7 DM1 A "C4'" 1
HETATM 155 O "O4'" . DM1 B 2 . ? 16.275 7.499 9.209 1.00 7.62 ? 7 DM1 A "O4'" 1
HETATM 156 C "C5'" . DM1 B 2 . ? 14.129 8.146 8.137 1.00 6.85 ? 7 DM1 A "C5'" 1
HETATM 157 O "O5'" . DM1 B 2 . ? 14.823 8.061 6.825 1.00 6.75 ? 7 DM1 A "O5'" 1
HETATM 158 C "C6'" . DM1 B 2 . ? 13.516 6.799 8.452 1.00 7.09 ? 7 DM1 A "C6'" 1
HETATM 159 O O . HOH C 3 . ? 16.067 19.012 24.250 1.00 8.20 ? 8 HOH A O 1
HETATM 160 O O . HOH C 3 . ? 10.636 25.056 22.317 1.00 8.60 ? 9 HOH A O 1
HETATM 161 O O . HOH C 3 . ? 18.906 16.508 25.145 1.00 7.69 ? 10 HOH A O 1
HETATM 162 O O . HOH C 3 . ? 15.858 5.598 11.058 1.00 17.39 ? 11 HOH A O 1
HETATM 163 O O . HOH C 3 . ? 18.453 11.430 13.714 1.00 16.14 ? 12 HOH A O 1
HETATM 164 O O . HOH C 3 . ? 17.297 3.715 4.011 1.00 34.68 ? 13 HOH A O 1
HETATM 165 O O . HOH C 3 . ? 25.948 15.723 13.351 1.00 19.95 ? 14 HOH A O 1
HETATM 166 O O . HOH C 3 . ? 13.760 8.210 1.713 1.00 14.84 ? 15 HOH A O 1
HETATM 167 O O . HOH C 3 . ? 22.378 15.724 7.385 1.00 17.02 ? 16 HOH A O 1
HETATM 168 O O . HOH C 3 . ? 10.828 19.229 5.516 1.00 20.31 ? 17 HOH A O 1
HETATM 169 O O . HOH C 3 . ? 21.952 13.154 3.312 1.00 14.94 ? 18 HOH A O 1
HETATM 170 O O . HOH C 3 . ? 19.540 14.424 2.878 1.00 10.24 ? 19 HOH A O 1
HETATM 171 O O . HOH C 3 . ? 8.690 16.272 16.461 1.00 37.04 ? 20 HOH A O 1
HETATM 172 O O . HOH C 3 . ? 13.499 19.002 11.843 1.00 14.76 ? 21 HOH A O 1
HETATM 173 O O . HOH C 3 . ? 17.440 5.950 6.938 1.00 15.20 ? 22 HOH A O 1
HETATM 174 O O . HOH C 3 . ? 14.091 6.294 4.429 1.00 14.30 ? 23 HOH A O 1
HETATM 175 O O . HOH C 3 . ? 17.255 21.016 13.603 1.00 19.99 ? 24 HOH A O 1
HETATM 176 O O . HOH C 3 . ? 9.091 21.535 20.030 1.00 11.24 ? 25 HOH A O 1
HETATM 177 O O . HOH C 3 . ? 25.784 15.884 10.705 1.00 19.68 ? 26 HOH A O 1
HETATM 178 O O . HOH C 3 . ? 19.398 8.511 10.122 1.00 14.42 ? 27 HOH A O 1
HETATM 179 O O . HOH C 3 . ? 21.324 7.286 7.970 1.00 38.89 ? 28 HOH A O 1
HETATM 180 O O . HOH C 3 . ? 17.389 25.213 18.945 1.00 32.70 ? 29 HOH A O 1
HETATM 181 O O . HOH C 3 . ? 18.881 21.950 20.084 1.00 27.45 ? 30 HOH A O 1
HETATM 182 O O . HOH C 3 . ? 16.079 21.808 25.005 1.00 24.06 ? 31 HOH A O 1
HETATM 183 O O . HOH C 3 . ? 17.866 16.713 1.191 1.00 13.63 ? 32 HOH A O 1
HETATM 184 O O . HOH C 3 . ? 24.586 10.051 3.278 1.00 35.41 ? 33 HOH A O 1
HETATM 185 O O . HOH C 3 . ? 13.982 25.966 24.516 1.00 28.28 ? 34 HOH A O 1
HETATM 186 O O . HOH C 3 . ? 21.326 23.484 16.003 1.00 21.00 ? 35 HOH A O 1
HETATM 187 O O . HOH C 3 . ? 23.779 8.820 7.065 1.00 40.31 ? 36 HOH A O 1
HETATM 188 O O . HOH C 3 . ? 13.034 19.380 14.690 1.00 19.92 ? 37 HOH A O 1
HETATM 189 O O . HOH C 3 . ? 20.492 18.617 11.378 1.00 18.71 ? 38 HOH A O 1
HETATM 190 O O . HOH C 3 . ? 17.220 20.007 8.427 1.00 13.12 ? 39 HOH A O 1
HETATM 191 O O . HOH C 3 . ? 10.307 5.309 7.416 1.00 7.93 ? 40 HOH A O 1
HETATM 192 O O . HOH C 3 . ? 14.021 3.339 9.137 1.00 19.93 ? 41 HOH A O 1
HETATM 193 O O . HOH C 3 . ? 20.559 15.742 0.791 1.00 37.62 ? 42 HOH A O 1
HETATM 194 O O . HOH C 3 . ? 25.782 13.183 13.867 1.00 20.86 ? 43 HOH A O 1
HETATM 195 O O . HOH C 3 . ? 11.395 5.547 4.908 1.00 16.44 ? 44 HOH A O 1
HETATM 196 O O . HOH C 3 . ? 12.098 2.775 4.854 1.00 33.06 ? 45 HOH A O 1
HETATM 197 O O . HOH C 3 . ? 21.516 21.509 20.731 1.00 19.48 ? 46 HOH A O 1
HETATM 198 O O . HOH C 3 . ? 21.538 17.827 8.924 1.00 32.12 ? 47 HOH A O 1
HETATM 199 O O . HOH C 3 . ? 23.090 17.967 3.461 1.00 27.48 ? 48 HOH A O 1
HETATM 200 O O . HOH C 3 . ? 18.658 21.366 24.098 1.00 41.37 ? 49 HOH A O 1
HETATM 201 O O . HOH C 3 . ? 18.209 24.339 21.758 1.00 27.52 ? 50 HOH A O 1
HETATM 202 O O . HOH C 3 . ? 25.738 11.881 5.618 1.00 38.73 ? 51 HOH A O 1
HETATM 203 O O . HOH C 3 . ? 19.330 19.237 1.782 1.00 30.10 ? 52 HOH A O 1
HETATM 204 O O . HOH C 3 . ? 23.394 15.011 5.080 1.00 19.46 ? 53 HOH A O 1
HETATM 205 O O . HOH C 3 . ? 15.648 3.788 5.884 1.00 39.58 ? 54 HOH A O 1
HETATM 206 O O . HOH C 3 . ? 20.150 18.796 24.480 1.00 33.66 ? 55 HOH A O 1
HETATM 207 O O . HOH C 3 . ? 13.785 0.979 2.557 1.00 29.17 ? 56 HOH A O 1
HETATM 208 O O . HOH C 3 . ? 21.307 20.630 23.284 1.00 31.71 ? 57 HOH A O 1
HETATM 209 O O . HOH C 3 . ? 15.671 27.779 24.764 1.00 66.66 ? 58 HOH A O 1
HETATM 210 O O . HOH C 3 . ? 20.703 25.999 13.628 1.00 25.13 ? 59 HOH A O 1
HETATM 211 O O . HOH C 3 . ? 20.479 22.859 13.187 1.00 45.82 ? 60 HOH A O 1
HETATM 212 O O . HOH C 3 . ? 14.476 5.103 0.868 1.00 32.65 ? 61 HOH A O 1
#