data_138D
#
_entry.id 138D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 138D pdb_0000138d 10.2210/pdb138d/pdb
RCSB ADJ051 ? ?
WWPDB D_1000170088 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1994-01-15
2 'Structure model' 1 1 2008-05-22
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 138D
_pdbx_database_status.recvd_initial_deposition_date 1993-09-15
_pdbx_database_status.deposit_site BNL
_pdbx_database_status.process_site NDB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Ramakrishnan, B.' 1
'Sundaralingam, M.' 2
#
_citation.id primary
_citation.title
;Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures.
;
_citation.journal_abbrev Biochemistry
_citation.journal_volume 32
_citation.page_first 11458
_citation.page_last 11468
_citation.year 1993
_citation.journal_id_ASTM BICHAW
_citation.country US
_citation.journal_id_ISSN 0006-2960
_citation.journal_id_CSD 0033
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 8218212
_citation.pdbx_database_id_DOI 10.1021/bi00093a025
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ramakrishnan, B.' 1 ?
primary 'Sundaralingam, M.' 2 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')
;
3046.980 1 ? ? ? ?
2 water nat water 18.015 38 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DG)(DG)(DC)(DC)(DC)(DG)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GCGGGCCCGC
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 DC n
1 3 DG n
1 4 DG n
1 5 DG n
1 6 DC n
1 7 DC n
1 8 DC n
1 9 DG n
1 10 DC n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
HOH non-polymer . WATER ? 'H2 O' 18.015
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG G A . n
A 1 2 DC 2 2 2 DC C A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DG 5 5 5 DG G A . n
A 1 6 DC 6 6 6 DC C A . n
A 1 7 DC 7 7 7 DC C A . n
A 1 8 DC 8 8 8 DC C A . n
A 1 9 DG 9 9 9 DG G A . n
A 1 10 DC 10 10 10 DC C A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 11 11 HOH HOH A .
B 2 HOH 2 12 12 HOH HOH A .
B 2 HOH 3 13 13 HOH HOH A .
B 2 HOH 4 14 14 HOH HOH A .
B 2 HOH 5 15 15 HOH HOH A .
B 2 HOH 6 16 16 HOH HOH A .
B 2 HOH 7 17 17 HOH HOH A .
B 2 HOH 8 18 18 HOH HOH A .
B 2 HOH 9 19 19 HOH HOH A .
B 2 HOH 10 20 20 HOH HOH A .
B 2 HOH 11 21 21 HOH HOH A .
B 2 HOH 12 22 22 HOH HOH A .
B 2 HOH 13 23 23 HOH HOH A .
B 2 HOH 14 24 24 HOH HOH A .
B 2 HOH 15 25 25 HOH HOH A .
B 2 HOH 16 26 26 HOH HOH A .
B 2 HOH 17 27 27 HOH HOH A .
B 2 HOH 18 28 28 HOH HOH A .
B 2 HOH 19 29 29 HOH HOH A .
B 2 HOH 20 30 30 HOH HOH A .
B 2 HOH 21 31 31 HOH HOH A .
B 2 HOH 22 32 32 HOH HOH A .
B 2 HOH 23 33 33 HOH HOH A .
B 2 HOH 24 34 34 HOH HOH A .
B 2 HOH 25 35 35 HOH HOH A .
B 2 HOH 26 36 36 HOH HOH A .
B 2 HOH 27 37 37 HOH HOH A .
B 2 HOH 28 38 38 HOH HOH A .
B 2 HOH 29 39 39 HOH HOH A .
B 2 HOH 30 40 40 HOH HOH A .
B 2 HOH 31 41 41 HOH HOH A .
B 2 HOH 32 42 42 HOH HOH A .
B 2 HOH 33 43 43 HOH HOH A .
B 2 HOH 34 44 44 HOH HOH A .
B 2 HOH 35 45 45 HOH HOH A .
B 2 HOH 36 46 46 HOH HOH A .
B 2 HOH 37 47 47 HOH HOH A .
B 2 HOH 38 48 48 HOH HOH A .
#
_software.name X-PLOR
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 138D
_cell.length_a 39.110
_cell.length_b 39.110
_cell.length_c 79.230
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 12
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 138D
_symmetry.space_group_name_H-M 'P 61 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 178
#
_exptl.entry_id 138D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.87
_exptl_crystal.density_percent_sol 57.15
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.00
_exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 WATER ? ? ?
1 2 1 'NA CACODYLATE' ? ? ?
1 3 1 '[CO(NH3)6]CL3' ? ? ?
1 4 2 WATER ? ? ?
1 5 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 290.00
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'AREA DETECTOR'
_diffrn_detector.type SIEMENS
_diffrn_detector.pdbx_collection_date ?
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 138D
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 15.000
_reflns.d_resolution_high 1.800
_reflns.number_obs 3435
_reflns.number_all ?
_reflns.percent_possible_obs ?
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_refine.entry_id 138D
_refine.ls_number_reflns_obs 2298
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 3.000
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.000
_refine.ls_d_res_high 1.800
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.1830000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.1830000
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 202
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 38
_refine_hist.number_atoms_total 240
_refine_hist.d_res_high 1.800
_refine_hist.d_res_low 8.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 3.60 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d 31.9 ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d 3.90 ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 138D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 138D
_struct.title 'A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORM'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 138D
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 138D
_struct_ref.pdbx_db_accession 138D
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 138D
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 10
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 138D
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 10
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 10
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 39.6150000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 1 A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 3 A DC 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 3 A DC 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 3 A DC 8 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 5 A DC 6 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 6 A DG 5 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 8 A DG 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 8 A DG 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 8 A DG 3 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog27 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog28 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog29 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog30 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 10 A DG 1 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
_struct_conn_type.id hydrog
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
_pdbx_validate_rmsd_bond.id 1
_pdbx_validate_rmsd_bond.PDB_model_num 1
_pdbx_validate_rmsd_bond.auth_atom_id_1 C6
_pdbx_validate_rmsd_bond.auth_asym_id_1 A
_pdbx_validate_rmsd_bond.auth_comp_id_1 DG
_pdbx_validate_rmsd_bond.auth_seq_id_1 3
_pdbx_validate_rmsd_bond.PDB_ins_code_1 ?
_pdbx_validate_rmsd_bond.label_alt_id_1 ?
_pdbx_validate_rmsd_bond.auth_atom_id_2 N1
_pdbx_validate_rmsd_bond.auth_asym_id_2 A
_pdbx_validate_rmsd_bond.auth_comp_id_2 DG
_pdbx_validate_rmsd_bond.auth_seq_id_2 3
_pdbx_validate_rmsd_bond.PDB_ins_code_2 ?
_pdbx_validate_rmsd_bond.label_alt_id_2 ?
_pdbx_validate_rmsd_bond.bond_value 1.349
_pdbx_validate_rmsd_bond.bond_target_value 1.391
_pdbx_validate_rmsd_bond.bond_deviation -0.042
_pdbx_validate_rmsd_bond.bond_standard_deviation 0.007
_pdbx_validate_rmsd_bond.linker_flag N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O3'" A DG 1 ? ? P A DC 2 ? ? OP2 A DC 2 ? ? 88.25 105.20 -16.95 2.20 Y
2 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 101.98 104.50 -2.52 0.40 N
3 1 "O4'" A DG 3 ? ? "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? 101.21 104.50 -3.29 0.40 N
4 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 95.40 102.20 -6.80 0.70 N
5 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 113.04 108.30 4.74 0.30 N
6 1 "O3'" A DG 4 ? ? P A DG 5 ? ? OP2 A DG 5 ? ? 119.21 110.50 8.71 1.10 Y
7 1 "O3'" A DG 4 ? ? P A DG 5 ? ? OP1 A DG 5 ? ? 84.29 105.20 -20.91 2.20 Y
8 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.34 108.30 4.04 0.30 N
9 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP2 A DC 6 ? ? 119.60 110.50 9.10 1.10 Y
10 1 "O3'" A DG 5 ? ? P A DC 6 ? ? OP1 A DC 6 ? ? 88.87 105.20 -16.33 2.20 Y
11 1 "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? "C2'" A DC 6 ? ? 97.78 102.20 -4.42 0.70 N
12 1 "O3'" A DC 6 ? ? P A DC 7 ? ? "O5'" A DC 7 ? ? 118.24 104.00 14.24 1.90 Y
13 1 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.88 102.20 -4.32 0.70 N
14 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.20 108.30 3.90 0.30 N
15 1 "O5'" A DC 8 ? ? "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? 104.16 109.40 -5.24 0.80 N
16 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.28 108.30 1.98 0.30 N
17 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.11 108.30 1.81 0.30 N
18 1 "O3'" A DG 9 ? ? P A DC 10 ? ? OP2 A DC 10 ? ? 118.81 110.50 8.31 1.10 Y
19 1 "O3'" A DG 9 ? ? P A DC 10 ? ? OP1 A DC 10 ? ? 91.50 105.20 -13.70 2.20 Y
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 1 DG A 3 ? ? 0.076 'SIDE CHAIN'
2 1 DG A 4 ? ? 0.097 'SIDE CHAIN'
3 1 DC A 6 ? ? 0.070 'SIDE CHAIN'
4 1 DC A 7 ? ? 0.075 'SIDE CHAIN'
5 1 DG A 9 ? ? 0.090 'SIDE CHAIN'
#
loop_
_refine_B_iso.class
_refine_B_iso.details
_refine_B_iso.treatment
_refine_B_iso.pdbx_refine_id
'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION'
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION'
#
loop_
_refine_occupancy.class
_refine_occupancy.treatment
_refine_occupancy.pdbx_refine_id
'ALL ATOMS' fix 'X-RAY DIFFRACTION'
'ALL WATERS' fix 'X-RAY DIFFRACTION'
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
DC OP3 O N N 1
DC P P N N 2
DC OP1 O N N 3
DC OP2 O N N 4
DC "O5'" O N N 5
DC "C5'" C N N 6
DC "C4'" C N R 7
DC "O4'" O N N 8
DC "C3'" C N S 9
DC "O3'" O N N 10
DC "C2'" C N N 11
DC "C1'" C N R 12
DC N1 N N N 13
DC C2 C N N 14
DC O2 O N N 15
DC N3 N N N 16
DC C4 C N N 17
DC N4 N N N 18
DC C5 C N N 19
DC C6 C N N 20
DC HOP3 H N N 21
DC HOP2 H N N 22
DC "H5'" H N N 23
DC "H5''" H N N 24
DC "H4'" H N N 25
DC "H3'" H N N 26
DC "HO3'" H N N 27
DC "H2'" H N N 28
DC "H2''" H N N 29
DC "H1'" H N N 30
DC H41 H N N 31
DC H42 H N N 32
DC H5 H N N 33
DC H6 H N N 34
DG OP3 O N N 35
DG P P N N 36
DG OP1 O N N 37
DG OP2 O N N 38
DG "O5'" O N N 39
DG "C5'" C N N 40
DG "C4'" C N R 41
DG "O4'" O N N 42
DG "C3'" C N S 43
DG "O3'" O N N 44
DG "C2'" C N N 45
DG "C1'" C N R 46
DG N9 N Y N 47
DG C8 C Y N 48
DG N7 N Y N 49
DG C5 C Y N 50
DG C6 C N N 51
DG O6 O N N 52
DG N1 N N N 53
DG C2 C N N 54
DG N2 N N N 55
DG N3 N N N 56
DG C4 C Y N 57
DG HOP3 H N N 58
DG HOP2 H N N 59
DG "H5'" H N N 60
DG "H5''" H N N 61
DG "H4'" H N N 62
DG "H3'" H N N 63
DG "HO3'" H N N 64
DG "H2'" H N N 65
DG "H2''" H N N 66
DG "H1'" H N N 67
DG H8 H N N 68
DG H1 H N N 69
DG H21 H N N 70
DG H22 H N N 71
HOH O O N N 72
HOH H1 H N N 73
HOH H2 H N N 74
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DC OP3 P sing N N 1
DC OP3 HOP3 sing N N 2
DC P OP1 doub N N 3
DC P OP2 sing N N 4
DC P "O5'" sing N N 5
DC OP2 HOP2 sing N N 6
DC "O5'" "C5'" sing N N 7
DC "C5'" "C4'" sing N N 8
DC "C5'" "H5'" sing N N 9
DC "C5'" "H5''" sing N N 10
DC "C4'" "O4'" sing N N 11
DC "C4'" "C3'" sing N N 12
DC "C4'" "H4'" sing N N 13
DC "O4'" "C1'" sing N N 14
DC "C3'" "O3'" sing N N 15
DC "C3'" "C2'" sing N N 16
DC "C3'" "H3'" sing N N 17
DC "O3'" "HO3'" sing N N 18
DC "C2'" "C1'" sing N N 19
DC "C2'" "H2'" sing N N 20
DC "C2'" "H2''" sing N N 21
DC "C1'" N1 sing N N 22
DC "C1'" "H1'" sing N N 23
DC N1 C2 sing N N 24
DC N1 C6 sing N N 25
DC C2 O2 doub N N 26
DC C2 N3 sing N N 27
DC N3 C4 doub N N 28
DC C4 N4 sing N N 29
DC C4 C5 sing N N 30
DC N4 H41 sing N N 31
DC N4 H42 sing N N 32
DC C5 C6 doub N N 33
DC C5 H5 sing N N 34
DC C6 H6 sing N N 35
DG OP3 P sing N N 36
DG OP3 HOP3 sing N N 37
DG P OP1 doub N N 38
DG P OP2 sing N N 39
DG P "O5'" sing N N 40
DG OP2 HOP2 sing N N 41
DG "O5'" "C5'" sing N N 42
DG "C5'" "C4'" sing N N 43
DG "C5'" "H5'" sing N N 44
DG "C5'" "H5''" sing N N 45
DG "C4'" "O4'" sing N N 46
DG "C4'" "C3'" sing N N 47
DG "C4'" "H4'" sing N N 48
DG "O4'" "C1'" sing N N 49
DG "C3'" "O3'" sing N N 50
DG "C3'" "C2'" sing N N 51
DG "C3'" "H3'" sing N N 52
DG "O3'" "HO3'" sing N N 53
DG "C2'" "C1'" sing N N 54
DG "C2'" "H2'" sing N N 55
DG "C2'" "H2''" sing N N 56
DG "C1'" N9 sing N N 57
DG "C1'" "H1'" sing N N 58
DG N9 C8 sing Y N 59
DG N9 C4 sing Y N 60
DG C8 N7 doub Y N 61
DG C8 H8 sing N N 62
DG N7 C5 sing Y N 63
DG C5 C6 sing N N 64
DG C5 C4 doub Y N 65
DG C6 O6 doub N N 66
DG C6 N1 sing N N 67
DG N1 C2 sing N N 68
DG N1 H1 sing N N 69
DG C2 N2 sing N N 70
DG C2 N3 doub N N 71
DG N2 H21 sing N N 72
DG N2 H22 sing N N 73
DG N3 C4 sing N N 74
HOH O H1 sing N N 75
HOH O H2 sing N N 76
#
_ndb_struct_conf_na.entry_id 138D
_ndb_struct_conf_na.feature 'a-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 A DC 10 11_555 -0.287 -0.216 -0.127 -3.305 -7.021 -4.078 1 A_DG1:DC10_A A 1 ? A 10 ? 19 1
1 A DC 2 1_555 A DG 9 11_555 0.220 -0.359 -0.085 -0.627 -7.871 -1.069 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1
1 A DG 3 1_555 A DC 8 11_555 -0.103 -0.299 -0.022 1.214 -8.167 -2.546 3 A_DG3:DC8_A A 3 ? A 8 ? 19 1
1 A DG 4 1_555 A DC 7 11_555 -0.143 -0.214 0.168 10.461 -9.885 1.514 4 A_DG4:DC7_A A 4 ? A 7 ? 19 1
1 A DG 5 1_555 A DC 6 11_555 -0.428 -0.141 -0.235 2.939 -17.284 -3.332 5 A_DG5:DC6_A A 5 ? A 6 ? 19 1
1 A DC 6 1_555 A DG 5 11_555 0.428 -0.141 -0.235 -2.939 -17.284 -3.332 6 A_DC6:DG5_A A 6 ? A 5 ? 19 1
1 A DC 7 1_555 A DG 4 11_555 0.143 -0.214 0.168 -10.461 -9.885 1.514 7 A_DC7:DG4_A A 7 ? A 4 ? 19 1
1 A DC 8 1_555 A DG 3 11_555 0.103 -0.299 -0.022 -1.214 -8.167 -2.546 8 A_DC8:DG3_A A 8 ? A 3 ? 19 1
1 A DG 9 1_555 A DC 2 11_555 -0.220 -0.359 -0.085 0.627 -7.871 -1.069 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1
1 A DC 10 1_555 A DG 1 11_555 0.287 -0.216 -0.127 3.305 -7.021 -4.078 10 A_DC10:DG1_A A 10 ? A 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 A DC 10 11_555 A DC 2 1_555 A DG 9 11_555 0.476 -0.943 3.327 0.445 4.784 32.531 -2.484 -0.765 3.166 8.482
-0.790 32.875 1 AA_DG1DC2:DG9DC10_AA A 1 ? A 10 ? A 2 ? A 9 ?
1 A DC 2 1_555 A DG 9 11_555 A DG 3 1_555 A DC 8 11_555 -0.137 -1.500 3.224 -0.308 12.692 33.126 -4.158 0.184 2.500 21.311
0.518 35.412 2 AA_DC2DG3:DC8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ?
1 A DG 3 1_555 A DC 8 11_555 A DG 4 1_555 A DC 7 11_555 -0.457 -1.604 3.120 -4.138 6.151 25.100 -5.061 -0.011 2.697 13.776
9.267 26.155 3 AA_DG3DG4:DC7DC8_AA A 3 ? A 8 ? A 4 ? A 7 ?
1 A DG 4 1_555 A DC 7 11_555 A DG 5 1_555 A DC 6 11_555 -0.878 -1.183 3.441 -2.268 11.161 32.546 -3.745 1.129 2.941 19.196
3.901 34.430 4 AA_DG4DG5:DC6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ?
1 A DG 5 1_555 A DC 6 11_555 A DC 6 1_555 A DG 5 11_555 0.000 -1.172 3.380 0.000 7.286 39.159 -2.568 0.000 3.122 10.757
0.000 39.804 5 AA_DG5DC6:DG5DC6_AA A 5 ? A 6 ? A 6 ? A 5 ?
1 A DC 6 1_555 A DG 5 11_555 A DC 7 1_555 A DG 4 11_555 0.878 -1.183 3.441 2.268 11.160 32.546 -3.745 -1.129 2.941 19.195
-3.901 34.430 6 AA_DC6DC7:DG4DG5_AA A 6 ? A 5 ? A 7 ? A 4 ?
1 A DC 7 1_555 A DG 4 11_555 A DC 8 1_555 A DG 3 11_555 0.457 -1.604 3.120 4.138 6.151 25.100 -5.061 0.011 2.697 13.776
-9.267 26.155 7 AA_DC7DC8:DG3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ?
1 A DC 8 1_555 A DG 3 11_555 A DG 9 1_555 A DC 2 11_555 0.137 -1.500 3.224 0.308 12.692 33.126 -4.158 -0.184 2.500 21.311
-0.518 35.412 8 AA_DC8DG9:DC2DG3_AA A 8 ? A 3 ? A 9 ? A 2 ?
1 A DG 9 1_555 A DC 2 11_555 A DC 10 1_555 A DG 1 11_555 -0.476 -0.943 3.327 -0.445 4.784 32.531 -2.484 0.765 3.166 8.482
0.790 32.875 9 AA_DG9DC10:DG1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ?
#
_atom_sites.entry_id 138D
_atom_sites.fract_transf_matrix[1][1] 0.025569
_atom_sites.fract_transf_matrix[1][2] 0.014762
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.029524
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.012621
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
ATOM 1 O "O5'" . DG A 1 1 ? -9.792 20.175 16.605 1.00 40.80 ? 1 DG A "O5'" 1
ATOM 2 C "C5'" . DG A 1 1 ? -10.004 18.764 16.607 1.00 32.20 ? 1 DG A "C5'" 1
ATOM 3 C "C4'" . DG A 1 1 ? -9.310 18.144 15.441 1.00 26.15 ? 1 DG A "C4'" 1
ATOM 4 O "O4'" . DG A 1 1 ? -9.883 18.625 14.231 1.00 27.69 ? 1 DG A "O4'" 1
ATOM 5 C "C3'" . DG A 1 1 ? -7.911 18.643 15.413 1.00 25.04 ? 1 DG A "C3'" 1
ATOM 6 O "O3'" . DG A 1 1 ? -7.147 17.842 16.268 1.00 24.41 ? 1 DG A "O3'" 1
ATOM 7 C "C2'" . DG A 1 1 ? -7.595 18.459 13.954 1.00 21.41 ? 1 DG A "C2'" 1
ATOM 8 C "C1'" . DG A 1 1 ? -8.848 18.920 13.266 1.00 22.28 ? 1 DG A "C1'" 1
ATOM 9 N N9 . DG A 1 1 ? -8.857 20.366 13.008 1.00 21.48 ? 1 DG A N9 1
ATOM 10 C C8 . DG A 1 1 ? -9.564 21.344 13.663 1.00 23.30 ? 1 DG A C8 1
ATOM 11 N N7 . DG A 1 1 ? -9.471 22.522 13.151 1.00 22.71 ? 1 DG A N7 1
ATOM 12 C C5 . DG A 1 1 ? -8.662 22.321 12.051 1.00 20.95 ? 1 DG A C5 1
ATOM 13 C C6 . DG A 1 1 ? -8.240 23.260 11.086 1.00 21.64 ? 1 DG A C6 1
ATOM 14 O O6 . DG A 1 1 ? -8.511 24.456 11.041 1.00 24.70 ? 1 DG A O6 1
ATOM 15 N N1 . DG A 1 1 ? -7.454 22.672 10.116 1.00 21.41 ? 1 DG A N1 1
ATOM 16 C C2 . DG A 1 1 ? -7.108 21.344 10.099 1.00 18.47 ? 1 DG A C2 1
ATOM 17 N N2 . DG A 1 1 ? -6.301 20.962 9.109 1.00 17.94 ? 1 DG A N2 1
ATOM 18 N N3 . DG A 1 1 ? -7.513 20.454 11.012 1.00 19.76 ? 1 DG A N3 1
ATOM 19 C C4 . DG A 1 1 ? -8.272 21.014 11.961 1.00 19.56 ? 1 DG A C4 1
ATOM 20 P P . DC A 1 2 ? -5.842 18.435 16.986 1.00 33.80 ? 2 DC A P 1
ATOM 21 O OP1 . DC A 1 2 ? -5.320 17.614 18.103 1.00 37.95 ? 2 DC A OP1 1
ATOM 22 O OP2 . DC A 1 2 ? -6.608 19.673 17.255 1.00 36.53 ? 2 DC A OP2 1
ATOM 23 O "O5'" . DC A 1 2 ? -4.635 18.783 15.989 1.00 32.84 ? 2 DC A "O5'" 1
ATOM 24 C "C5'" . DC A 1 2 ? -4.025 17.757 15.217 1.00 25.01 ? 2 DC A "C5'" 1
ATOM 25 C "C4'" . DC A 1 2 ? -3.421 18.338 13.956 1.00 23.23 ? 2 DC A "C4'" 1
ATOM 26 O "O4'" . DC A 1 2 ? -4.443 19.028 13.259 1.00 24.18 ? 2 DC A "O4'" 1
ATOM 27 C "C3'" . DC A 1 2 ? -2.439 19.427 14.223 1.00 23.69 ? 2 DC A "C3'" 1
ATOM 28 O "O3'" . DC A 1 2 ? -1.186 18.948 14.586 1.00 31.14 ? 2 DC A "O3'" 1
ATOM 29 C "C2'" . DC A 1 2 ? -2.395 20.104 12.915 1.00 20.80 ? 2 DC A "C2'" 1
ATOM 30 C "C1'" . DC A 1 2 ? -3.865 20.140 12.571 1.00 22.58 ? 2 DC A "C1'" 1
ATOM 31 N N1 . DC A 1 2 ? -4.555 21.386 12.985 1.00 23.14 ? 2 DC A N1 1
ATOM 32 C C2 . DC A 1 2 ? -4.366 22.435 12.129 1.00 23.26 ? 2 DC A C2 1
ATOM 33 O O2 . DC A 1 2 ? -3.612 22.272 11.167 1.00 22.26 ? 2 DC A O2 1
ATOM 34 N N3 . DC A 1 2 ? -5.030 23.597 12.371 1.00 19.90 ? 2 DC A N3 1
ATOM 35 C C4 . DC A 1 2 ? -5.771 23.746 13.463 1.00 20.66 ? 2 DC A C4 1
ATOM 36 N N4 . DC A 1 2 ? -6.502 24.839 13.568 1.00 17.52 ? 2 DC A N4 1
ATOM 37 C C5 . DC A 1 2 ? -5.968 22.669 14.382 1.00 21.84 ? 2 DC A C5 1
ATOM 38 C C6 . DC A 1 2 ? -5.435 21.477 14.044 1.00 23.82 ? 2 DC A C6 1
ATOM 39 P P . DG A 1 3 ? -0.230 19.863 15.496 1.00 34.22 ? 3 DG A P 1
ATOM 40 O OP1 . DG A 1 3 ? 0.729 18.801 15.863 1.00 38.19 ? 3 DG A OP1 1
ATOM 41 O OP2 . DG A 1 3 ? -0.965 20.618 16.538 1.00 33.09 ? 3 DG A OP2 1
ATOM 42 O "O5'" . DG A 1 3 ? 0.506 20.900 14.500 1.00 27.77 ? 3 DG A "O5'" 1
ATOM 43 C "C5'" . DG A 1 3 ? 1.344 20.416 13.474 1.00 22.90 ? 3 DG A "C5'" 1
ATOM 44 C "C4'" . DG A 1 3 ? 1.594 21.544 12.550 1.00 23.41 ? 3 DG A "C4'" 1
ATOM 45 O "O4'" . DG A 1 3 ? 0.328 22.063 12.189 1.00 27.45 ? 3 DG A "O4'" 1
ATOM 46 C "C3'" . DG A 1 3 ? 2.179 22.694 13.283 1.00 25.09 ? 3 DG A "C3'" 1
ATOM 47 O "O3'" . DG A 1 3 ? 3.569 22.600 13.396 1.00 28.96 ? 3 DG A "O3'" 1
ATOM 48 C "C2'" . DG A 1 3 ? 1.836 23.816 12.362 1.00 26.32 ? 3 DG A "C2'" 1
ATOM 49 C "C1'" . DG A 1 3 ? 0.454 23.479 11.913 1.00 25.75 ? 3 DG A "C1'" 1
ATOM 50 N N9 . DG A 1 3 ? -0.475 24.190 12.788 1.00 21.20 ? 3 DG A N9 1
ATOM 51 C C8 . DG A 1 3 ? -1.287 23.640 13.746 1.00 18.65 ? 3 DG A C8 1
ATOM 52 N N7 . DG A 1 3 ? -2.157 24.476 14.225 1.00 19.41 ? 3 DG A N7 1
ATOM 53 C C5 . DG A 1 3 ? -2.009 25.598 13.433 1.00 16.09 ? 3 DG A C5 1
ATOM 54 C C6 . DG A 1 3 ? -2.749 26.762 13.429 1.00 11.30 ? 3 DG A C6 1
ATOM 55 O O6 . DG A 1 3 ? -3.716 27.039 14.106 1.00 18.82 ? 3 DG A O6 1
ATOM 56 N N1 . DG A 1 3 ? -2.265 27.663 12.550 1.00 17.41 ? 3 DG A N1 1
ATOM 57 C C2 . DG A 1 3 ? -1.202 27.449 11.718 1.00 17.90 ? 3 DG A C2 1
ATOM 58 N N2 . DG A 1 3 ? -0.851 28.487 10.981 1.00 21.30 ? 3 DG A N2 1
ATOM 59 N N3 . DG A 1 3 ? -0.537 26.303 11.626 1.00 20.69 ? 3 DG A N3 1
ATOM 60 C C4 . DG A 1 3 ? -0.966 25.441 12.563 1.00 20.92 ? 3 DG A C4 1
ATOM 61 P P . DG A 1 4 ? 4.301 23.380 14.573 1.00 34.60 ? 4 DG A P 1
ATOM 62 O OP1 . DG A 1 4 ? 5.590 22.662 14.484 1.00 42.80 ? 4 DG A OP1 1
ATOM 63 O OP2 . DG A 1 4 ? 3.497 23.355 15.822 1.00 37.77 ? 4 DG A OP2 1
ATOM 64 O "O5'" . DG A 1 4 ? 4.531 24.908 14.144 1.00 33.45 ? 4 DG A "O5'" 1
ATOM 65 C "C5'" . DG A 1 4 ? 5.304 25.224 13.010 1.00 27.01 ? 4 DG A "C5'" 1
ATOM 66 C "C4'" . DG A 1 4 ? 4.918 26.604 12.571 1.00 30.32 ? 4 DG A "C4'" 1
ATOM 67 O "O4'" . DG A 1 4 ? 3.503 26.657 12.360 1.00 31.83 ? 4 DG A "O4'" 1
ATOM 68 C "C3'" . DG A 1 4 ? 5.180 27.628 13.641 1.00 31.17 ? 4 DG A "C3'" 1
ATOM 69 O "O3'" . DG A 1 4 ? 6.530 28.029 13.638 1.00 35.44 ? 4 DG A "O3'" 1
ATOM 70 C "C2'" . DG A 1 4 ? 4.346 28.699 13.018 1.00 35.26 ? 4 DG A "C2'" 1
ATOM 71 C "C1'" . DG A 1 4 ? 3.043 27.995 12.647 1.00 32.37 ? 4 DG A "C1'" 1
ATOM 72 N N9 . DG A 1 4 ? 2.045 28.045 13.762 1.00 26.23 ? 4 DG A N9 1
ATOM 73 C C8 . DG A 1 4 ? 1.642 27.021 14.584 1.00 25.81 ? 4 DG A C8 1
ATOM 74 N N7 . DG A 1 4 ? 0.583 27.301 15.284 1.00 26.06 ? 4 DG A N7 1
ATOM 75 C C5 . DG A 1 4 ? 0.222 28.567 14.847 1.00 20.58 ? 4 DG A C5 1
ATOM 76 C C6 . DG A 1 4 ? -0.880 29.368 15.220 1.00 21.27 ? 4 DG A C6 1
ATOM 77 O O6 . DG A 1 4 ? -1.798 29.066 15.974 1.00 19.85 ? 4 DG A O6 1
ATOM 78 N N1 . DG A 1 4 ? -0.848 30.617 14.630 1.00 19.53 ? 4 DG A N1 1
ATOM 79 C C2 . DG A 1 4 ? 0.130 31.046 13.797 1.00 17.40 ? 4 DG A C2 1
ATOM 80 N N2 . DG A 1 4 ? 0.030 32.298 13.402 1.00 18.28 ? 4 DG A N2 1
ATOM 81 N N3 . DG A 1 4 ? 1.157 30.283 13.407 1.00 23.92 ? 4 DG A N3 1
ATOM 82 C C4 . DG A 1 4 ? 1.140 29.057 13.972 1.00 22.61 ? 4 DG A C4 1
ATOM 83 P P . DG A 1 5 ? 7.146 28.771 14.901 1.00 37.48 ? 5 DG A P 1
ATOM 84 O OP1 . DG A 1 5 ? 8.427 28.623 14.178 1.00 42.01 ? 5 DG A OP1 1
ATOM 85 O OP2 . DG A 1 5 ? 6.955 28.187 16.244 1.00 38.64 ? 5 DG A OP2 1
ATOM 86 O "O5'" . DG A 1 5 ? 6.801 30.316 14.971 1.00 41.44 ? 5 DG A "O5'" 1
ATOM 87 C "C5'" . DG A 1 5 ? 7.392 31.236 14.061 1.00 33.16 ? 5 DG A "C5'" 1
ATOM 88 C "C4'" . DG A 1 5 ? 6.650 32.560 14.165 1.00 30.68 ? 5 DG A "C4'" 1
ATOM 89 O "O4'" . DG A 1 5 ? 5.279 32.332 13.807 1.00 31.19 ? 5 DG A "O4'" 1
ATOM 90 C "C3'" . DG A 1 5 ? 6.615 33.093 15.606 1.00 28.76 ? 5 DG A "C3'" 1
ATOM 91 O "O3'" . DG A 1 5 ? 7.744 33.883 15.916 1.00 24.89 ? 5 DG A "O3'" 1
ATOM 92 C "C2'" . DG A 1 5 ? 5.390 33.943 15.524 1.00 27.41 ? 5 DG A "C2'" 1
ATOM 93 C "C1'" . DG A 1 5 ? 4.455 33.093 14.696 1.00 27.75 ? 5 DG A "C1'" 1
ATOM 94 N N9 . DG A 1 5 ? 3.681 32.242 15.604 1.00 24.20 ? 5 DG A N9 1
ATOM 95 C C8 . DG A 1 5 ? 3.737 30.905 15.860 1.00 21.74 ? 5 DG A C8 1
ATOM 96 N N7 . DG A 1 5 ? 2.763 30.487 16.607 1.00 25.60 ? 5 DG A N7 1
ATOM 97 C C5 . DG A 1 5 ? 1.947 31.607 16.754 1.00 20.65 ? 5 DG A C5 1
ATOM 98 C C6 . DG A 1 5 ? 0.741 31.777 17.471 1.00 21.50 ? 5 DG A C6 1
ATOM 99 O O6 . DG A 1 5 ? 0.123 30.947 18.135 1.00 23.47 ? 5 DG A O6 1
ATOM 100 N N1 . DG A 1 5 ? 0.312 33.090 17.424 1.00 19.38 ? 5 DG A N1 1
ATOM 101 C C2 . DG A 1 5 ? 0.948 34.124 16.761 1.00 19.64 ? 5 DG A C2 1
ATOM 102 N N2 . DG A 1 5 ? 0.416 35.347 16.857 1.00 16.68 ? 5 DG A N2 1
ATOM 103 N N3 . DG A 1 5 ? 2.082 33.953 16.091 1.00 19.72 ? 5 DG A N3 1
ATOM 104 C C4 . DG A 1 5 ? 2.528 32.684 16.166 1.00 22.61 ? 5 DG A C4 1
ATOM 105 P P . DC A 1 6 ? 8.199 34.035 17.401 1.00 26.72 ? 6 DC A P 1
ATOM 106 O OP1 . DC A 1 6 ? 9.374 34.791 16.933 1.00 32.23 ? 6 DC A OP1 1
ATOM 107 O OP2 . DC A 1 6 ? 8.367 32.838 18.234 1.00 27.74 ? 6 DC A OP2 1
ATOM 108 O "O5'" . DC A 1 6 ? 7.217 35.043 18.161 1.00 26.42 ? 6 DC A "O5'" 1
ATOM 109 C "C5'" . DC A 1 6 ? 7.200 36.415 17.836 1.00 20.76 ? 6 DC A "C5'" 1
ATOM 110 C "C4'" . DC A 1 6 ? 6.002 37.038 18.456 1.00 18.08 ? 6 DC A "C4'" 1
ATOM 111 O "O4'" . DC A 1 6 ? 4.832 36.332 18.000 1.00 20.64 ? 6 DC A "O4'" 1
ATOM 112 C "C3'" . DC A 1 6 ? 5.993 36.837 19.907 1.00 18.36 ? 6 DC A "C3'" 1
ATOM 113 O "O3'" . DC A 1 6 ? 6.908 37.674 20.537 1.00 20.88 ? 6 DC A "O3'" 1
ATOM 114 C "C2'" . DC A 1 6 ? 4.540 37.114 20.141 1.00 15.33 ? 6 DC A "C2'" 1
ATOM 115 C "C1'" . DC A 1 6 ? 3.872 36.281 19.056 1.00 19.91 ? 6 DC A "C1'" 1
ATOM 116 N N1 . DC A 1 6 ? 3.608 34.855 19.409 1.00 21.87 ? 6 DC A N1 1
ATOM 117 C C2 . DC A 1 6 ? 2.449 34.616 20.111 1.00 18.29 ? 6 DC A C2 1
ATOM 118 O O2 . DC A 1 6 ? 1.786 35.541 20.564 1.00 23.46 ? 6 DC A O2 1
ATOM 119 N N3 . DC A 1 6 ? 2.071 33.349 20.300 1.00 20.36 ? 6 DC A N3 1
ATOM 120 C C4 . DC A 1 6 ? 2.903 32.351 20.036 1.00 20.81 ? 6 DC A C4 1
ATOM 121 N N4 . DC A 1 6 ? 2.524 31.121 20.370 1.00 20.13 ? 6 DC A N4 1
ATOM 122 C C5 . DC A 1 6 ? 4.156 32.563 19.399 1.00 17.34 ? 6 DC A C5 1
ATOM 123 C C6 . DC A 1 6 ? 4.405 33.816 19.002 1.00 18.93 ? 6 DC A C6 1
ATOM 124 P P . DC A 1 7 ? 7.449 37.319 21.993 1.00 30.24 ? 7 DC A P 1
ATOM 125 O OP1 . DC A 1 7 ? 8.254 38.554 22.162 1.00 29.97 ? 7 DC A OP1 1
ATOM 126 O OP2 . DC A 1 7 ? 8.117 35.999 21.867 1.00 31.90 ? 7 DC A OP2 1
ATOM 127 O "O5'" . DC A 1 7 ? 6.387 37.234 23.201 1.00 28.00 ? 7 DC A "O5'" 1
ATOM 128 C "C5'" . DC A 1 7 ? 5.574 38.366 23.497 1.00 29.85 ? 7 DC A "C5'" 1
ATOM 129 C "C4'" . DC A 1 7 ? 4.292 38.002 24.233 1.00 24.59 ? 7 DC A "C4'" 1
ATOM 130 O "O4'" . DC A 1 7 ? 3.482 37.116 23.459 1.00 21.11 ? 7 DC A "O4'" 1
ATOM 131 C "C3'" . DC A 1 7 ? 4.627 37.269 25.515 1.00 25.57 ? 7 DC A "C3'" 1
ATOM 132 O "O3'" . DC A 1 7 ? 5.086 38.187 26.507 1.00 29.99 ? 7 DC A "O3'" 1
ATOM 133 C "C2'" . DC A 1 7 ? 3.282 36.645 25.753 1.00 22.98 ? 7 DC A "C2'" 1
ATOM 134 C "C1'" . DC A 1 7 ? 2.899 36.156 24.353 1.00 20.38 ? 7 DC A "C1'" 1
ATOM 135 N N1 . DC A 1 7 ? 3.330 34.770 24.046 1.00 14.89 ? 7 DC A N1 1
ATOM 136 C C2 . DC A 1 7 ? 2.504 33.799 24.506 1.00 17.34 ? 7 DC A C2 1
ATOM 137 O O2 . DC A 1 7 ? 1.578 34.088 25.250 1.00 19.09 ? 7 DC A O2 1
ATOM 138 N N3 . DC A 1 7 ? 2.722 32.532 24.142 1.00 16.61 ? 7 DC A N3 1
ATOM 139 C C4 . DC A 1 7 ? 3.752 32.209 23.382 1.00 16.75 ? 7 DC A C4 1
ATOM 140 N N4 . DC A 1 7 ? 3.855 30.952 22.982 1.00 19.34 ? 7 DC A N4 1
ATOM 141 C C5 . DC A 1 7 ? 4.699 33.181 22.963 1.00 17.62 ? 7 DC A C5 1
ATOM 142 C C6 . DC A 1 7 ? 4.413 34.459 23.277 1.00 16.23 ? 7 DC A C6 1
ATOM 143 P P . DC A 1 8 ? 6.074 37.701 27.657 1.00 31.61 ? 8 DC A P 1
ATOM 144 O OP1 . DC A 1 8 ? 6.488 38.871 28.442 1.00 32.57 ? 8 DC A OP1 1
ATOM 145 O OP2 . DC A 1 8 ? 7.053 36.700 27.186 1.00 32.16 ? 8 DC A OP2 1
ATOM 146 O "O5'" . DC A 1 8 ? 4.957 36.950 28.472 1.00 22.93 ? 8 DC A "O5'" 1
ATOM 147 C "C5'" . DC A 1 8 ? 5.294 35.929 29.364 1.00 20.90 ? 8 DC A "C5'" 1
ATOM 148 C "C4'" . DC A 1 8 ? 4.003 35.240 29.633 1.00 21.44 ? 8 DC A "C4'" 1
ATOM 149 O "O4'" . DC A 1 8 ? 3.560 34.676 28.390 1.00 22.76 ? 8 DC A "O4'" 1
ATOM 150 C "C3'" . DC A 1 8 ? 4.176 34.056 30.530 1.00 24.98 ? 8 DC A "C3'" 1
ATOM 151 O "O3'" . DC A 1 8 ? 4.092 34.394 31.901 1.00 27.72 ? 8 DC A "O3'" 1
ATOM 152 C "C2'" . DC A 1 8 ? 2.994 33.272 30.134 1.00 20.52 ? 8 DC A "C2'" 1
ATOM 153 C "C1'" . DC A 1 8 ? 2.927 33.431 28.645 1.00 20.06 ? 8 DC A "C1'" 1
ATOM 154 N N1 . DC A 1 8 ? 3.643 32.348 27.964 1.00 20.10 ? 8 DC A N1 1
ATOM 155 C C2 . DC A 1 8 ? 2.959 31.148 27.862 1.00 21.12 ? 8 DC A C2 1
ATOM 156 O O2 . DC A 1 8 ? 1.875 30.992 28.414 1.00 20.78 ? 8 DC A O2 1
ATOM 157 N N3 . DC A 1 8 ? 3.491 30.165 27.116 1.00 20.81 ? 8 DC A N3 1
ATOM 158 C C4 . DC A 1 8 ? 4.626 30.359 26.454 1.00 18.20 ? 8 DC A C4 1
ATOM 159 N N4 . DC A 1 8 ? 5.133 29.333 25.793 1.00 23.92 ? 8 DC A N4 1
ATOM 160 C C5 . DC A 1 8 ? 5.307 31.620 26.452 1.00 22.56 ? 8 DC A C5 1
ATOM 161 C C6 . DC A 1 8 ? 4.777 32.587 27.227 1.00 21.56 ? 8 DC A C6 1
ATOM 162 P P . DG A 1 9 ? 5.059 33.657 32.917 1.00 28.68 ? 9 DG A P 1
ATOM 163 O OP1 . DG A 1 9 ? 4.805 34.446 34.129 1.00 34.58 ? 9 DG A OP1 1
ATOM 164 O OP2 . DG A 1 9 ? 6.437 33.452 32.414 1.00 31.72 ? 9 DG A OP2 1
ATOM 165 O "O5'" . DG A 1 9 ? 4.342 32.241 33.041 1.00 26.68 ? 9 DG A "O5'" 1
ATOM 166 C "C5'" . DG A 1 9 ? 3.108 32.140 33.713 1.00 27.93 ? 9 DG A "C5'" 1
ATOM 167 C "C4'" . DG A 1 9 ? 2.522 30.751 33.582 1.00 30.66 ? 9 DG A "C4'" 1
ATOM 168 O "O4'" . DG A 1 9 ? 2.377 30.399 32.217 1.00 30.43 ? 9 DG A "O4'" 1
ATOM 169 C "C3'" . DG A 1 9 ? 3.403 29.667 34.156 1.00 29.94 ? 9 DG A "C3'" 1
ATOM 170 O "O3'" . DG A 1 9 ? 3.235 29.599 35.555 1.00 33.09 ? 9 DG A "O3'" 1
ATOM 171 C "C2'" . DG A 1 9 ? 2.786 28.470 33.491 1.00 28.39 ? 9 DG A "C2'" 1
ATOM 172 C "C1'" . DG A 1 9 ? 2.598 28.993 32.091 1.00 27.13 ? 9 DG A "C1'" 1
ATOM 173 N N9 . DG A 1 9 ? 3.802 28.741 31.289 1.00 21.53 ? 9 DG A N9 1
ATOM 174 C C8 . DG A 1 9 ? 4.715 29.615 30.756 1.00 15.03 ? 9 DG A C8 1
ATOM 175 N N7 . DG A 1 9 ? 5.357 29.107 29.746 1.00 17.54 ? 9 DG A N7 1
ATOM 176 C C5 . DG A 1 9 ? 4.806 27.839 29.565 1.00 16.95 ? 9 DG A C5 1
ATOM 177 C C6 . DG A 1 9 ? 5.154 26.785 28.684 1.00 18.75 ? 9 DG A C6 1
ATOM 178 O O6 . DG A 1 9 ? 6.022 26.759 27.824 1.00 22.30 ? 9 DG A O6 1
ATOM 179 N N1 . DG A 1 9 ? 4.376 25.666 28.874 1.00 17.62 ? 9 DG A N1 1
ATOM 180 C C2 . DG A 1 9 ? 3.416 25.538 29.847 1.00 16.49 ? 9 DG A C2 1
ATOM 181 N N2 . DG A 1 9 ? 2.713 24.407 29.891 1.00 17.06 ? 9 DG A N2 1
ATOM 182 N N3 . DG A 1 9 ? 3.166 26.488 30.741 1.00 19.05 ? 9 DG A N3 1
ATOM 183 C C4 . DG A 1 9 ? 3.889 27.603 30.533 1.00 18.79 ? 9 DG A C4 1
ATOM 184 P P . DC A 1 10 ? 4.445 29.107 36.477 1.00 36.61 ? 10 DC A P 1
ATOM 185 O OP1 . DC A 1 10 ? 3.715 29.491 37.707 1.00 40.08 ? 10 DC A OP1 1
ATOM 186 O OP2 . DC A 1 10 ? 5.812 29.634 36.209 1.00 39.59 ? 10 DC A OP2 1
ATOM 187 O "O5'" . DC A 1 10 ? 4.467 27.497 36.367 1.00 31.28 ? 10 DC A "O5'" 1
ATOM 188 C "C5'" . DC A 1 10 ? 3.364 26.741 36.834 1.00 25.12 ? 10 DC A "C5'" 1
ATOM 189 C "C4'" . DC A 1 10 ? 3.499 25.361 36.299 1.00 25.32 ? 10 DC A "C4'" 1
ATOM 190 O "O4'" . DC A 1 10 ? 3.512 25.458 34.873 1.00 26.96 ? 10 DC A "O4'" 1
ATOM 191 C "C3'" . DC A 1 10 ? 4.882 24.819 36.619 1.00 24.45 ? 10 DC A "C3'" 1
ATOM 192 O "O3'" . DC A 1 10 ? 5.090 24.453 37.985 1.00 30.68 ? 10 DC A "O3'" 1
ATOM 193 C "C2'" . DC A 1 10 ? 4.934 23.722 35.609 1.00 22.95 ? 10 DC A "C2'" 1
ATOM 194 C "C1'" . DC A 1 10 ? 4.326 24.394 34.368 1.00 22.85 ? 10 DC A "C1'" 1
ATOM 195 N N1 . DC A 1 10 ? 5.316 24.958 33.431 1.00 19.54 ? 10 DC A N1 1
ATOM 196 C C2 . DC A 1 10 ? 5.703 24.123 32.422 1.00 20.19 ? 10 DC A C2 1
ATOM 197 O O2 . DC A 1 10 ? 5.289 22.972 32.433 1.00 22.69 ? 10 DC A O2 1
ATOM 198 N N3 . DC A 1 10 ? 6.526 24.594 31.454 1.00 18.28 ? 10 DC A N3 1
ATOM 199 C C4 . DC A 1 10 ? 7.004 25.844 31.526 1.00 20.35 ? 10 DC A C4 1
ATOM 200 N N4 . DC A 1 10 ? 7.786 26.310 30.548 1.00 16.97 ? 10 DC A N4 1
ATOM 201 C C5 . DC A 1 10 ? 6.675 26.705 32.615 1.00 18.52 ? 10 DC A C5 1
ATOM 202 C C6 . DC A 1 10 ? 5.772 26.242 33.496 1.00 22.14 ? 10 DC A C6 1
HETATM 203 O O . HOH B 2 . ? 8.144 28.059 27.328 1.00 48.69 ? 11 HOH A O 1
HETATM 204 O O . HOH B 2 . ? -1.384 21.273 9.423 1.00 67.72 ? 12 HOH A O 1
HETATM 205 O O . HOH B 2 . ? 3.373 31.385 11.058 1.00 53.44 ? 13 HOH A O 1
HETATM 206 O O . HOH B 2 . ? 6.729 30.739 18.334 1.00 43.48 ? 14 HOH A O 1
HETATM 207 O O . HOH B 2 . ? 0.615 38.409 20.866 1.00 54.71 ? 15 HOH A O 1
HETATM 208 O O . HOH B 2 . ? 7.456 30.266 33.876 1.00 67.84 ? 16 HOH A O 1
HETATM 209 O O . HOH B 2 . ? 10.042 37.561 15.380 1.00 63.93 ? 17 HOH A O 1
HETATM 210 O O . HOH B 2 . ? 6.421 30.212 20.963 1.00 45.90 ? 18 HOH A O 1
HETATM 211 O O . HOH B 2 . ? 7.571 34.671 24.786 1.00 62.53 ? 19 HOH A O 1
HETATM 212 O O . HOH B 2 . ? -7.095 22.274 17.348 1.00 59.21 ? 20 HOH A O 1
HETATM 213 O O . HOH B 2 . ? 0.888 26.128 32.281 1.00 77.43 ? 21 HOH A O 1
HETATM 214 O O . HOH B 2 . ? -11.562 24.622 14.830 1.00 71.85 ? 22 HOH A O 1
HETATM 215 O O . HOH B 2 . ? -3.857 15.740 19.755 1.00 96.12 ? 23 HOH A O 1
HETATM 216 O O . HOH B 2 . ? -8.100 16.902 19.709 1.00 58.28 ? 24 HOH A O 1
HETATM 217 O O . HOH B 2 . ? 4.393 29.021 18.614 1.00 100.44 ? 25 HOH A O 1
HETATM 218 O O . HOH B 2 . ? -4.341 20.626 18.291 1.00 67.07 ? 26 HOH A O 1
HETATM 219 O O . HOH B 2 . ? 0.932 24.169 34.520 1.00 75.80 ? 27 HOH A O 1
HETATM 220 O O . HOH B 2 . ? 7.875 30.411 29.640 1.00 69.23 ? 28 HOH A O 1
HETATM 221 O O . HOH B 2 . ? 10.692 30.345 16.278 1.00 89.07 ? 29 HOH A O 1
HETATM 222 O O . HOH B 2 . ? 11.028 36.106 19.972 1.00 66.52 ? 30 HOH A O 1
HETATM 223 O O . HOH B 2 . ? 1.359 26.872 9.808 1.00 80.01 ? 31 HOH A O 1
HETATM 224 O O . HOH B 2 . ? -8.201 24.812 15.778 1.00 52.20 ? 32 HOH A O 1
HETATM 225 O O . HOH B 2 . ? -4.708 26.031 16.319 1.00 65.11 ? 33 HOH A O 1
HETATM 226 O O . HOH B 2 . ? 8.443 34.456 30.664 1.00 85.38 ? 34 HOH A O 1
HETATM 227 O O . HOH B 2 . ? 8.039 33.841 28.068 1.00 88.57 ? 35 HOH A O 1
HETATM 228 O O . HOH B 2 . ? 7.729 33.170 21.112 1.00 65.65 ? 36 HOH A O 1
HETATM 229 O O . HOH B 2 . ? 6.866 36.144 33.434 1.00 110.24 ? 37 HOH A O 1
HETATM 230 O O . HOH B 2 . ? 8.608 37.801 31.316 1.00 87.21 ? 38 HOH A O 1
HETATM 231 O O . HOH B 2 . ? -0.092 31.828 30.285 1.00 58.66 ? 39 HOH A O 1
HETATM 232 O O . HOH B 2 . ? 8.783 23.862 15.220 1.00 107.92 ? 40 HOH A O 1
HETATM 233 O O . HOH B 2 . ? -3.902 23.093 16.681 1.00 59.40 ? 41 HOH A O 1
HETATM 234 O O . HOH B 2 . ? 12.322 33.418 18.994 1.00 116.93 ? 42 HOH A O 1
HETATM 235 O O . HOH B 2 . ? 9.173 28.778 32.008 1.00 84.47 ? 43 HOH A O 1
HETATM 236 O O . HOH B 2 . ? 10.259 32.302 20.819 1.00 117.19 ? 44 HOH A O 1
HETATM 237 O O . HOH B 2 . ? 5.174 40.664 31.066 1.00 81.09 ? 45 HOH A O 1
HETATM 238 O O . HOH B 2 . ? 6.735 23.109 17.714 1.00 93.79 ? 46 HOH A O 1
HETATM 239 O O . HOH B 2 . ? 10.793 26.630 15.763 1.00 112.58 ? 47 HOH A O 1
HETATM 240 O O . HOH B 2 . ? -4.005 20.595 21.313 1.00 88.33 ? 48 HOH A O 1
#