HEADER DNA 03-MAY-93 122D
TITLE DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR
TITLE 2 D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3');
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 SYNTHETIC: YES
KEYWDS B-DNA, DOUBLE HELIX, MODIFIED, DNA
EXPDTA X-RAY DIFFRACTION
AUTHOR M.HAHN,U.HEINEMANN
REVDAT 4 07-FEB-24 122D 1 LINK
REVDAT 3 18-APR-18 122D 1 REMARK
REVDAT 2 24-FEB-09 122D 1 VERSN
REVDAT 1 15-OCT-93 122D 0
JRNL AUTH M.HAHN,U.HEINEMANN
JRNL TITL DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF
JRNL TITL 2 MODELS FOR D(CCAGGCM5CTGG) DERIVED FROM NUCLSQ, TNT AND
JRNL TITL 3 X-PLOR.
JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 49 468 1993
JRNL REFN ISSN 0907-4449
JRNL PMID 15299506
JRNL DOI 10.1107/S0907444993004858
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH U.HEINEMANN,M.HAHN
REMARK 1 TITL C-C-A-G-G-C-M5C-T-G-G: HELICAL FINE STRUCTURE, HYDRATION,
REMARK 1 TITL 2 AND COMPARISON WITH C-C-A-G-G-C-C-T-G-G
REMARK 1 REF J.BIOL.CHEM. V. 267 7332 1992
REMARK 1 REFN ISSN 0021-9258
REMARK 1 REFERENCE 2
REMARK 1 AUTH U.HEINEMANN,C.ALINGS,M.BANSAL
REMARK 1 TITL DOUBLE HELIX CONFORMATION, GROOVE DIMENSIONS AND LIGAND
REMARK 1 TITL 2 BINDING POTENTIAL OF A G/C-STRETCH IN B-DNA
REMARK 1 REF EMBO J. V. 11 1931 1992
REMARK 1 REFN ISSN 0261-4189
REMARK 1 REFERENCE 3
REMARK 1 AUTH U.HEINEMANN,C.ALINGS
REMARK 1 TITL THE CONFORMATION OF A B-DNA DECAMER IS MAINLY DETERMINED BY
REMARK 1 TITL 2 ITS SEQUENCE AND NOT BY CRYSTAL ENVIRONMENT
REMARK 1 REF EMBO J. V. 10 35 1991
REMARK 1 REFN ISSN 0261-4189
REMARK 1 REFERENCE 4
REMARK 1 AUTH U.HEINEMANN,C.ALINGS
REMARK 1 TITL CRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNA
REMARK 1 REF J.MOL.BIOL. V. 210 369 1989
REMARK 1 REFN ISSN 0022-2836
REMARK 2
REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : TNT
REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 COMPLETENESS FOR RANGE (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 3799
REMARK 3
REMARK 3 USING DATA ABOVE SIGMA CUTOFF.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING + TEST SET) : 0.206
REMARK 3 R VALUE (WORKING SET) : NULL
REMARK 3 FREE R VALUE : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3
REMARK 3 USING ALL DATA, NO SIGMA CUTOFF.
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 0
REMARK 3 NUCLEIC ACID ATOMS : 406
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 37
REMARK 3
REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT
REMARK 3 BOND LENGTHS (A) : NULL ; NULL ; NULL
REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL
REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL
REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL
REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL
REMARK 3
REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : NULL
REMARK 3 KSOL : NULL
REMARK 3 BSOL : NULL
REMARK 3
REMARK 3 RESTRAINT LIBRARIES.
REMARK 3 STEREOCHEMISTRY : NULL
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 122D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.
REMARK 100 THE DEPOSITION ID IS D_1000170054.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : 7.50
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : DIFFRACTOMETER
REMARK 200 DETECTOR MANUFACTURER : ENRAF-NONIUS CAD4
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4704
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750
REMARK 200 RESOLUTION RANGE LOW (A) : NULL
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: NULL
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 47.49
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.50, MICRODIALYSIS, TEMPERATURE
REMARK 280 277.00K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 -X,-Y,Z
REMARK 290 5555 Y,-X+Y,Z
REMARK 290 6555 X-Y,X,Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 57 LIES ON A SPECIAL POSITION.
REMARK 375 HOH B 56 LIES ON A SPECIAL POSITION.
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 C5A 5CM B 17 O HOH B 39 1.24
REMARK 500 C5 5CM B 17 O HOH B 39 1.95
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 DC A 1 C2 DC A 1 N3 -0.061
REMARK 500 DC A 1 N3 DC A 1 C4 0.043
REMARK 500 DC A 2 C5' DC A 2 C4' 0.056
REMARK 500 DC A 2 O3' DC A 2 C3' -0.044
REMARK 500 DC A 2 N1 DC A 2 C6 -0.037
REMARK 500 DA A 3 C2 DA A 3 N3 -0.076
REMARK 500 DA A 3 N9 DA A 3 C4 -0.046
REMARK 500 DG A 4 C2' DG A 4 C1' -0.072
REMARK 500 DG A 4 N7 DG A 4 C8 0.078
REMARK 500 DG A 5 N1 DG A 5 C2 -0.054
REMARK 500 DG A 5 N3 DG A 5 C4 0.051
REMARK 500 DG A 5 C4 DG A 5 C5 -0.043
REMARK 500 DC A 6 C2 DC A 6 O2 -0.073
REMARK 500 DT A 8 C3' DT A 8 C2' 0.077
REMARK 500 DT A 8 C5 DT A 8 C6 -0.044
REMARK 500 DT A 8 C5 DT A 8 C7 0.046
REMARK 500 DG A 9 N1 DG A 9 C2 -0.067
REMARK 500 DG A 9 C6 DG A 9 N1 -0.078
REMARK 500 DG A 10 N7 DG A 10 C8 0.057
REMARK 500 DC B 11 C4' DC B 11 C3' -0.063
REMARK 500 DC B 11 O3' DC B 11 C3' -0.046
REMARK 500 DC B 11 C2 DC B 11 O2 -0.063
REMARK 500 DC B 12 O3' DC B 12 C3' -0.050
REMARK 500 DC B 12 C4 DC B 12 C5 -0.104
REMARK 500 DA B 13 C5 DA B 13 N7 -0.050
REMARK 500 DA B 13 N7 DA B 13 C8 0.048
REMARK 500 DG B 14 P DG B 14 O5' 0.069
REMARK 500 DG B 14 C4' DG B 14 C3' 0.085
REMARK 500 DG B 14 C2 DG B 14 N3 -0.064
REMARK 500 DG B 14 N3 DG B 14 C4 -0.052
REMARK 500 DG B 14 C5 DG B 14 N7 -0.051
REMARK 500 DG B 14 N7 DG B 14 C8 -0.037
REMARK 500 DG B 14 N9 DG B 14 C4 -0.074
REMARK 500 DG B 14 C2 DG B 14 N2 -0.079
REMARK 500 DG B 15 O4' DG B 15 C4' 0.063
REMARK 500 DG B 15 C6 DG B 15 O6 -0.065
REMARK 500 DC B 16 O3' DC B 16 C3' -0.062
REMARK 500 DT B 18 O3' DT B 18 C3' -0.041
REMARK 500 DG B 19 N3 DG B 19 C4 -0.043
REMARK 500 DG B 20 C5 DG B 20 N7 -0.058
REMARK 500 DG B 20 C8 DG B 20 N9 -0.060
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 DC A 1 O4' - C4' - C3' ANGL. DEV. = -5.4 DEGREES
REMARK 500 DC A 1 C4' - C3' - C2' ANGL. DEV. = -7.7 DEGREES
REMARK 500 DC A 1 O4' - C1' - N1 ANGL. DEV. = -6.2 DEGREES
REMARK 500 DC A 1 N3 - C4 - C5 ANGL. DEV. = 2.7 DEGREES
REMARK 500 DC A 1 N3 - C2 - O2 ANGL. DEV. = -5.1 DEGREES
REMARK 500 DC A 1 C6 - N1 - C1' ANGL. DEV. = 7.8 DEGREES
REMARK 500 DC A 1 C2 - N1 - C1' ANGL. DEV. = -10.4 DEGREES
REMARK 500 DC A 1 C3' - O3' - P ANGL. DEV. = 14.6 DEGREES
REMARK 500 DC A 2 C4' - C3' - C2' ANGL. DEV. = -4.4 DEGREES
REMARK 500 DC A 2 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES
REMARK 500 DC A 2 C2 - N3 - C4 ANGL. DEV. = -4.8 DEGREES
REMARK 500 DC A 2 N3 - C4 - C5 ANGL. DEV. = 4.5 DEGREES
REMARK 500 DC A 2 C5 - C6 - N1 ANGL. DEV. = -3.4 DEGREES
REMARK 500 DC A 2 N1 - C2 - O2 ANGL. DEV. = -3.8 DEGREES
REMARK 500 DA A 3 O3' - P - OP2 ANGL. DEV. = 13.1 DEGREES
REMARK 500 DA A 3 O4' - C4' - C3' ANGL. DEV. = -3.1 DEGREES
REMARK 500 DA A 3 C1' - O4' - C4' ANGL. DEV. = 4.6 DEGREES
REMARK 500 DA A 3 C6 - N1 - C2 ANGL. DEV. = -4.2 DEGREES
REMARK 500 DA A 3 C2 - N3 - C4 ANGL. DEV. = 3.2 DEGREES
REMARK 500 DA A 3 N3 - C4 - C5 ANGL. DEV. = -4.8 DEGREES
REMARK 500 DA A 3 C4 - C5 - N7 ANGL. DEV. = -4.1 DEGREES
REMARK 500 DA A 3 N9 - C4 - C5 ANGL. DEV. = 3.9 DEGREES
REMARK 500 DA A 3 N1 - C6 - N6 ANGL. DEV. = -8.4 DEGREES
REMARK 500 DA A 3 C5 - C6 - N6 ANGL. DEV. = 5.8 DEGREES
REMARK 500 DG A 4 O3' - P - OP2 ANGL. DEV. = 8.7 DEGREES
REMARK 500 DG A 4 O5' - P - OP2 ANGL. DEV. = -8.6 DEGREES
REMARK 500 DG A 4 O5' - C5' - C4' ANGL. DEV. = -5.8 DEGREES
REMARK 500 DG A 4 C1' - O4' - C4' ANGL. DEV. = -7.7 DEGREES
REMARK 500 DG A 4 O4' - C1' - C2' ANGL. DEV. = -5.3 DEGREES
REMARK 500 DG A 4 O4' - C1' - N9 ANGL. DEV. = -7.0 DEGREES
REMARK 500 DG A 4 N1 - C2 - N3 ANGL. DEV. = 4.3 DEGREES
REMARK 500 DG A 4 C5 - N7 - C8 ANGL. DEV. = 5.8 DEGREES
REMARK 500 DG A 4 N7 - C8 - N9 ANGL. DEV. = -10.0 DEGREES
REMARK 500 DG A 4 C8 - N9 - C4 ANGL. DEV. = 8.4 DEGREES
REMARK 500 DG A 4 C4 - N9 - C1' ANGL. DEV. = -10.2 DEGREES
REMARK 500 DG A 4 C3' - O3' - P ANGL. DEV. = 13.7 DEGREES
REMARK 500 DG A 5 P - O5' - C5' ANGL. DEV. = -10.1 DEGREES
REMARK 500 DG A 5 O4' - C4' - C3' ANGL. DEV. = -4.7 DEGREES
REMARK 500 DG A 5 C1' - O4' - C4' ANGL. DEV. = 4.5 DEGREES
REMARK 500 DG A 5 C4' - C3' - C2' ANGL. DEV. = 5.8 DEGREES
REMARK 500 DG A 5 O4' - C1' - N9 ANGL. DEV. = -5.6 DEGREES
REMARK 500 DG A 5 C6 - N1 - C2 ANGL. DEV. = -6.7 DEGREES
REMARK 500 DG A 5 C2 - N3 - C4 ANGL. DEV. = 3.6 DEGREES
REMARK 500 DG A 5 N3 - C4 - C5 ANGL. DEV. = -6.6 DEGREES
REMARK 500 DG A 5 C5 - C6 - N1 ANGL. DEV. = 5.3 DEGREES
REMARK 500 DG A 5 N3 - C4 - N9 ANGL. DEV. = 5.2 DEGREES
REMARK 500 DG A 5 C5 - C6 - O6 ANGL. DEV. = -7.2 DEGREES
REMARK 500 DC A 6 O4' - C1' - C2' ANGL. DEV. = -8.4 DEGREES
REMARK 500 DC A 6 O4' - C1' - N1 ANGL. DEV. = -5.6 DEGREES
REMARK 500 DC A 6 N1 - C2 - N3 ANGL. DEV. = 4.6 DEGREES
REMARK 500
REMARK 500 THIS ENTRY HAS 137 ANGLE DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 DC A 1 0.09 SIDE CHAIN
REMARK 500 DG A 5 0.07 SIDE CHAIN
REMARK 500 DT A 8 0.08 SIDE CHAIN
REMARK 500 DG B 19 0.07 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
DBREF 122D A 1 10 PDB 122D 122D 1 10
DBREF 122D B 11 20 PDB 122D 122D 11 20
SEQRES 1 A 10 DC DC DA DG DG DC 5CM DT DG DG
SEQRES 1 B 10 DC DC DA DG DG DC 5CM DT DG DG
MODRES 122D 5CM A 7 DC
MODRES 122D 5CM B 17 DC
HET 5CM A 7 20
HET 5CM B 17 20
HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
FORMUL 1 5CM 2(C10 H16 N3 O7 P)
FORMUL 3 HOH *37(H2 O)
LINK O3' DC A 6 P 5CM A 7 1555 1555 1.64
LINK O3' 5CM A 7 P DT A 8 1555 1555 1.63
LINK O3' DC B 16 P 5CM B 17 1555 1555 1.63
LINK O3' 5CM B 17 P DT B 18 1555 1555 1.61
CRYST1 53.770 53.770 34.350 90.00 90.00 120.00 P 6 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.018598 0.010737 0.000000 0.00000
SCALE2 0.000000 0.021475 0.000000 0.00000
SCALE3 0.000000 0.000000 0.029112 0.00000
ATOM 1 O5' DC A 1 16.319 0.419 21.469 1.00 53.13 O
ATOM 2 C5' DC A 1 15.513 -0.605 20.713 1.00 52.24 C
ATOM 3 C4' DC A 1 14.357 -0.093 19.854 1.00 48.78 C
ATOM 4 O4' DC A 1 14.787 1.211 19.373 1.00 45.12 O
ATOM 5 C3' DC A 1 14.168 -0.792 18.515 1.00 48.21 C
ATOM 6 O3' DC A 1 12.932 -0.326 17.828 1.00 50.18 O
ATOM 7 C2' DC A 1 15.540 -0.373 17.965 1.00 43.95 C
ATOM 8 C1' DC A 1 15.486 1.118 18.171 1.00 41.00 C
ATOM 9 N1 DC A 1 16.696 1.816 18.480 1.00 29.72 N
ATOM 10 C2 DC A 1 16.400 3.166 18.618 1.00 25.85 C
ATOM 11 O2 DC A 1 15.244 3.586 18.686 1.00 23.10 O
ATOM 12 N3 DC A 1 17.341 4.051 18.583 1.00 28.33 N
ATOM 13 C4 DC A 1 18.631 3.586 18.446 1.00 28.30 C
ATOM 14 N4 DC A 1 19.545 4.517 18.446 1.00 28.76 N
ATOM 15 C5 DC A 1 18.981 2.235 18.343 1.00 27.28 C
ATOM 16 C6 DC A 1 17.959 1.397 18.343 1.00 28.30 C
ATOM 17 P DC A 2 11.749 -1.071 16.969 1.00 54.07 P
ATOM 18 OP1 DC A 2 10.700 -1.770 17.828 1.00 55.34 O
ATOM 19 OP2 DC A 2 12.475 -1.863 15.904 1.00 55.59 O
ATOM 20 O5' DC A 2 10.888 0.140 16.316 1.00 50.95 O
ATOM 21 C5' DC A 2 11.130 1.490 16.866 1.00 44.56 C
ATOM 22 C4' DC A 2 10.996 2.747 15.938 1.00 37.26 C
ATOM 23 O4' DC A 2 12.206 3.539 15.938 1.00 33.87 O
ATOM 24 C3' DC A 2 10.727 2.375 14.530 1.00 33.86 C
ATOM 25 O3' DC A 2 10.082 3.399 13.877 1.00 31.21 O
ATOM 26 C2' DC A 2 12.179 2.189 14.083 1.00 33.20 C
ATOM 27 C1' DC A 2 12.797 3.446 14.702 1.00 31.75 C
ATOM 28 N1 DC A 2 14.195 3.353 14.770 1.00 23.01 N
ATOM 29 C2 DC A 2 14.814 4.610 14.908 1.00 25.37 C
ATOM 30 O2 DC A 2 14.061 5.541 15.011 1.00 30.29 O
ATOM 31 N3 DC A 2 16.158 4.703 15.011 1.00 22.37 N
ATOM 32 C4 DC A 2 16.803 3.586 14.839 1.00 21.77 C
ATOM 33 N4 DC A 2 18.120 3.632 14.908 1.00 23.41 N
ATOM 34 C5 DC A 2 16.239 2.328 14.633 1.00 22.94 C
ATOM 35 C6 DC A 2 14.894 2.235 14.599 1.00 22.19 C
ATOM 36 P DA A 3 8.684 3.306 13.122 1.00 35.33 P
ATOM 37 OP1 DA A 3 7.608 3.120 14.118 1.00 41.53 O
ATOM 38 OP2 DA A 3 8.496 2.608 11.782 1.00 33.89 O
ATOM 39 O5' DA A 3 8.576 4.889 12.709 1.00 33.99 O
ATOM 40 C5' DA A 3 8.576 5.914 13.671 1.00 32.42 C
ATOM 41 C4' DA A 3 9.033 7.264 13.156 1.00 27.83 C
ATOM 42 O4' DA A 3 10.458 7.311 12.950 1.00 28.52 O
ATOM 43 C3' DA A 3 8.523 7.590 11.782 1.00 26.01 C
ATOM 44 O3' DA A 3 8.415 8.987 11.816 1.00 26.58 O
ATOM 45 C2' DA A 3 9.544 7.031 10.855 1.00 26.00 C
ATOM 46 C1' DA A 3 10.862 7.264 11.610 1.00 26.08 C
ATOM 47 N9 DA A 3 11.910 6.193 11.473 1.00 23.36 N
ATOM 48 C8 DA A 3 11.695 4.889 11.267 1.00 27.68 C
ATOM 49 N7 DA A 3 12.824 4.144 11.267 1.00 27.00 N
ATOM 50 C5 DA A 3 13.846 5.076 11.473 1.00 21.99 C
ATOM 51 C6 DA A 3 15.217 5.029 11.576 1.00 17.40 C
ATOM 52 N6 DA A 3 16.023 4.005 11.473 1.00 17.33 N
ATOM 53 N1 DA A 3 15.916 6.147 11.782 1.00 13.73 N
ATOM 54 C2 DA A 3 15.163 7.264 11.885 1.00 17.44 C
ATOM 55 N3 DA A 3 13.926 7.451 11.782 1.00 18.35 N
ATOM 56 C4 DA A 3 13.227 6.333 11.576 1.00 21.29 C
ATOM 57 P DG A 4 7.474 9.779 10.820 1.00 27.82 P
ATOM 58 OP1 DG A 4 7.044 10.896 11.679 1.00 31.85 O
ATOM 59 OP2 DG A 4 6.667 9.034 9.858 1.00 28.40 O
ATOM 60 O5' DG A 4 8.684 10.198 9.790 1.00 25.81 O
ATOM 61 C5' DG A 4 9.705 11.036 10.236 1.00 24.51 C
ATOM 62 C4' DG A 4 10.700 10.990 9.137 1.00 23.94 C
ATOM 63 O4' DG A 4 11.211 9.639 9.137 1.00 22.71 O
ATOM 64 C3' DG A 4 10.216 11.176 7.694 1.00 22.25 C
ATOM 65 O3' DG A 4 11.023 12.107 7.007 1.00 23.16 O
ATOM 66 C2' DG A 4 10.673 9.825 7.042 1.00 20.68 C
ATOM 67 C1' DG A 4 11.803 9.546 7.900 1.00 20.77 C
ATOM 68 N9 DG A 4 12.071 8.149 7.832 1.00 13.68 N
ATOM 69 C8 DG A 4 11.211 7.125 7.591 1.00 10.05 C
ATOM 70 N7 DG A 4 12.018 6.007 7.694 1.00 16.28 N
ATOM 71 C5 DG A 4 13.308 6.380 7.935 1.00 14.18 C
ATOM 72 C6 DG A 4 14.545 5.635 8.141 1.00 20.03 C
ATOM 73 O6 DG A 4 14.706 4.424 8.141 1.00 14.24 O
ATOM 74 N1 DG A 4 15.593 6.519 8.450 1.00 20.79 N
ATOM 75 C2 DG A 4 15.459 7.870 8.450 1.00 13.62 C
ATOM 76 N2 DG A 4 16.534 8.522 8.725 1.00 16.50 N
ATOM 77 N3 DG A 4 14.410 8.568 8.175 1.00 12.41 N
ATOM 78 C4 DG A 4 13.362 7.777 8.004 1.00 13.78 C
ATOM 79 P DG A 5 10.700 13.318 6.011 1.00 19.23 P
ATOM 80 OP1 DG A 5 10.351 14.296 7.076 1.00 16.98 O
ATOM 81 OP2 DG A 5 9.732 12.852 5.015 1.00 14.99 O
ATOM 82 O5' DG A 5 12.071 13.737 5.324 1.00 17.78 O
ATOM 83 C5' DG A 5 13.066 14.063 6.320 1.00 15.34 C
ATOM 84 C4' DG A 5 14.383 13.551 5.805 1.00 14.76 C
ATOM 85 O4' DG A 5 14.357 12.107 5.874 1.00 18.61 O
ATOM 86 C3' DG A 5 14.652 13.737 4.294 1.00 14.63 C
ATOM 87 O3' DG A 5 16.050 14.203 4.397 1.00 14.93 O
ATOM 88 C2' DG A 5 14.652 12.340 3.607 1.00 15.90 C
ATOM 89 C1' DG A 5 15.002 11.455 4.809 1.00 18.53 C
ATOM 90 N9 DG A 5 14.437 10.105 4.878 1.00 22.99 N
ATOM 91 C8 DG A 5 13.174 9.593 4.843 1.00 26.15 C
ATOM 92 N7 DG A 5 13.174 8.289 4.740 1.00 26.67 N
ATOM 93 C5 DG A 5 14.518 7.916 4.843 1.00 18.88 C
ATOM 94 C6 DG A 5 15.082 6.659 4.706 1.00 11.13 C
ATOM 95 O6 DG A 5 14.410 5.681 4.672 1.00 15.47 O
ATOM 96 N1 DG A 5 16.481 6.566 4.878 1.00 12.76 N
ATOM 97 C2 DG A 5 17.180 7.683 4.946 1.00 15.47 C
ATOM 98 N2 DG A 5 18.551 7.451 5.084 1.00 20.15 N
ATOM 99 N3 DG A 5 16.696 8.894 5.015 1.00 15.74 N
ATOM 100 C4 DG A 5 15.298 8.987 5.015 1.00 18.77 C
ATOM 101 P DC A 6 16.803 14.575 3.092 1.00 16.09 P
ATOM 102 OP1 DC A 6 17.502 15.879 3.401 1.00 19.04 O
ATOM 103 OP2 DC A 6 15.808 14.436 2.027 1.00 13.50 O
ATOM 104 O5' DC A 6 17.852 13.318 2.885 1.00 16.75 O
ATOM 105 C5' DC A 6 18.873 13.039 3.744 1.00 18.75 C
ATOM 106 C4' DC A 6 19.545 11.874 3.160 1.00 21.10 C
ATOM 107 O4' DC A 6 18.685 10.757 3.195 1.00 24.48 O
ATOM 108 C3' DC A 6 19.922 12.061 1.683 1.00 22.08 C
ATOM 109 O3' DC A 6 21.293 11.735 1.821 1.00 24.37 O
ATOM 110 C2' DC A 6 19.088 10.990 1.030 1.00 24.52 C
ATOM 111 C1' DC A 6 19.061 9.919 2.095 1.00 22.73 C
ATOM 112 N1 DC A 6 17.825 9.080 1.889 1.00 18.95 N
ATOM 113 C2 DC A 6 17.852 7.637 1.786 1.00 15.93 C
ATOM 114 O2 DC A 6 18.900 7.125 1.821 1.00 14.85 O
ATOM 115 N3 DC A 6 16.776 6.892 1.546 1.00 11.50 N
ATOM 116 C4 DC A 6 15.674 7.590 1.477 1.00 13.99 C
ATOM 117 N4 DC A 6 14.572 6.892 1.271 1.00 14.16 N
ATOM 118 C5 DC A 6 15.540 9.034 1.546 1.00 14.63 C
ATOM 119 C6 DC A 6 16.669 9.779 1.752 1.00 17.00 C
HETATM 120 N1 5CM A 7 19.949 7.357 -1.924 1.00 16.86 N
HETATM 121 C2 5CM A 7 19.250 6.147 -1.924 1.00 13.82 C
HETATM 122 N3 5CM A 7 17.879 6.100 -1.992 1.00 11.29 N
HETATM 123 C4 5CM A 7 17.314 7.264 -2.027 1.00 15.42 C
HETATM 124 C5 5CM A 7 18.040 8.522 -1.992 1.00 15.90 C
HETATM 125 C5A 5CM A 7 17.314 9.779 -2.027 1.00 12.72 C
HETATM 126 C6 5CM A 7 19.357 8.568 -1.958 1.00 18.31 C
HETATM 127 O2 5CM A 7 19.814 5.076 -2.027 1.00 13.69 O
HETATM 128 N4 5CM A 7 15.943 7.218 -2.027 1.00 16.92 N
HETATM 129 C1' 5CM A 7 21.427 7.311 -1.683 1.00 21.29 C
HETATM 130 C2' 5CM A 7 22.341 7.963 -2.679 1.00 21.22 C
HETATM 131 C3' 5CM A 7 23.444 8.382 -1.683 1.00 20.85 C
HETATM 132 C4' 5CM A 7 22.933 8.149 -0.275 1.00 20.37 C
HETATM 133 O4' 5CM A 7 21.535 8.056 -0.515 1.00 19.72 O
HETATM 134 O3' 5CM A 7 24.546 7.497 -1.786 1.00 25.81 O
HETATM 135 C5' 5CM A 7 22.906 9.313 0.721 1.00 25.77 C
HETATM 136 O5' 5CM A 7 22.422 10.524 -0.069 1.00 27.82 O
HETATM 137 P 5CM A 7 22.341 11.968 0.584 1.00 26.38 P
HETATM 138 OP1 5CM A 7 23.605 12.387 1.202 1.00 27.22 O
HETATM 139 OP2 5CM A 7 21.642 12.713 -0.447 1.00 21.56 O
ATOM 140 P DT A 8 25.568 7.404 -3.057 1.00 34.47 P
ATOM 141 OP1 DT A 8 26.804 7.031 -2.405 1.00 38.58 O
ATOM 142 OP2 DT A 8 25.460 8.615 -3.882 1.00 39.16 O
ATOM 143 O5' DT A 8 24.922 6.380 -4.088 1.00 30.35 O
ATOM 144 C5' DT A 8 24.788 5.029 -3.572 1.00 29.08 C
ATOM 145 C4' DT A 8 24.196 4.191 -4.637 1.00 27.29 C
ATOM 146 O4' DT A 8 22.745 4.377 -4.637 1.00 25.86 O
ATOM 147 C3' DT A 8 24.707 4.610 -5.943 1.00 28.50 C
ATOM 148 O3' DT A 8 24.707 3.492 -6.904 1.00 34.28 O
ATOM 149 C2' DT A 8 23.524 5.635 -6.252 1.00 25.02 C
ATOM 150 C1' DT A 8 22.368 4.750 -5.908 1.00 25.63 C
ATOM 151 N1 DT A 8 21.105 5.541 -5.943 1.00 25.55 N
ATOM 152 C2 DT A 8 20.002 4.750 -5.771 1.00 24.56 C
ATOM 153 O2 DT A 8 20.056 3.539 -5.874 1.00 21.62 O
ATOM 154 N3 DT A 8 18.793 5.448 -5.565 1.00 20.31 N
ATOM 155 C4 DT A 8 18.685 6.845 -5.427 1.00 21.04 C
ATOM 156 O4 DT A 8 17.610 7.404 -5.221 1.00 19.09 O
ATOM 157 C5 DT A 8 19.949 7.544 -5.565 1.00 17.90 C
ATOM 158 C7 DT A 8 19.922 9.080 -5.427 1.00 15.41 C
ATOM 159 C6 DT A 8 21.024 6.892 -5.874 1.00 16.47 C
ATOM 160 P DG A 9 25.944 2.654 -7.523 1.00 35.82 P
ATOM 161 OP1 DG A 9 26.670 2.235 -6.286 1.00 35.47 O
ATOM 162 OP2 DG A 9 26.374 3.399 -8.725 1.00 35.75 O
ATOM 163 O5' DG A 9 25.137 1.350 -8.072 1.00 29.04 O
ATOM 164 C5' DG A 9 24.896 0.373 -7.248 1.00 30.23 C
ATOM 165 C4' DG A 9 23.766 -0.373 -7.797 1.00 36.96 C
ATOM 166 O4' DG A 9 22.583 0.466 -7.969 1.00 39.22 O
ATOM 167 C3' DG A 9 24.008 -0.792 -9.240 1.00 42.25 C
ATOM 168 O3' DG A 9 23.175 -1.956 -9.446 1.00 46.15 O
ATOM 169 C2' DG A 9 23.524 0.419 -10.099 1.00 40.51 C
ATOM 170 C1' DG A 9 22.288 0.698 -9.343 1.00 38.99 C
ATOM 171 N9 DG A 9 21.804 2.095 -9.446 1.00 33.49 N
ATOM 172 C8 DG A 9 22.610 3.213 -9.584 1.00 32.55 C
ATOM 173 N7 DG A 9 21.911 4.331 -9.549 1.00 26.27 N
ATOM 174 C5 DG A 9 20.621 3.958 -9.171 1.00 23.00 C
ATOM 175 C6 DG A 9 19.519 4.750 -9.000 1.00 23.22 C
ATOM 176 O6 DG A 9 19.357 5.960 -9.000 1.00 30.40 O
ATOM 177 N1 DG A 9 18.443 4.005 -8.897 1.00 22.05 N
ATOM 178 C2 DG A 9 18.389 2.701 -8.862 1.00 23.60 C
ATOM 179 N2 DG A 9 17.126 2.282 -8.622 1.00 25.63 N
ATOM 180 N3 DG A 9 19.438 1.909 -9.000 1.00 24.89 N
ATOM 181 C4 DG A 9 20.540 2.608 -9.171 1.00 25.33 C
ATOM 182 P DG A 10 23.632 -2.654 -10.820 1.00 48.74 P
ATOM 183 OP1 DG A 10 23.282 -4.098 -10.648 1.00 50.06 O
ATOM 184 OP2 DG A 10 25.003 -2.235 -11.061 1.00 48.75 O
ATOM 185 O5' DG A 10 22.772 -1.909 -11.919 1.00 49.13 O
ATOM 186 C5' DG A 10 21.965 -2.841 -12.503 1.00 49.71 C
ATOM 187 C4' DG A 10 20.540 -2.515 -12.297 1.00 51.62 C
ATOM 188 O4' DG A 10 20.218 -1.118 -11.885 1.00 51.39 O
ATOM 189 C3' DG A 10 19.787 -2.608 -13.603 1.00 51.90 C
ATOM 190 O3' DG A 10 18.470 -2.841 -13.053 1.00 52.80 O
ATOM 191 C2' DG A 10 19.976 -1.164 -14.187 1.00 50.14 C
ATOM 192 C1' DG A 10 19.599 -0.419 -12.950 1.00 49.96 C
ATOM 193 N9 DG A 10 19.895 1.024 -12.881 1.00 42.50 N
ATOM 194 C8 DG A 10 21.185 1.490 -12.950 1.00 38.28 C
ATOM 195 N7 DG A 10 21.320 2.841 -12.847 1.00 38.59 N
ATOM 196 C5 DG A 10 20.002 3.260 -12.709 1.00 38.40 C
ATOM 197 C6 DG A 10 19.519 4.563 -12.503 1.00 36.61 C
ATOM 198 O6 DG A 10 20.137 5.635 -12.538 1.00 41.12 O
ATOM 199 N1 DG A 10 18.120 4.563 -12.400 1.00 32.15 N
ATOM 200 C2 DG A 10 17.368 3.446 -12.366 1.00 33.64 C
ATOM 201 N2 DG A 10 16.077 3.725 -12.229 1.00 36.14 N
ATOM 202 N3 DG A 10 17.771 2.189 -12.538 1.00 36.04 N
ATOM 203 C4 DG A 10 19.115 2.189 -12.709 1.00 39.49 C
TER 204 DG A 10
ATOM 205 O5' DC B 11 11.319 11.688 -12.194 1.00 57.02 O
ATOM 206 C5' DC B 11 10.996 10.571 -13.156 1.00 52.70 C
ATOM 207 C4' DC B 11 11.426 9.174 -12.744 1.00 46.64 C
ATOM 208 O4' DC B 11 12.717 8.708 -13.087 1.00 44.90 O
ATOM 209 C3' DC B 11 11.238 8.848 -11.335 1.00 43.66 C
ATOM 210 O3' DC B 11 10.404 7.777 -11.542 1.00 45.34 O
ATOM 211 C2' DC B 11 12.582 8.382 -10.855 1.00 39.23 C
ATOM 212 C1' DC B 11 13.227 7.823 -12.091 1.00 38.81 C
ATOM 213 N1 DC B 11 14.599 8.242 -11.988 1.00 32.21 N
ATOM 214 C2 DC B 11 15.190 7.031 -12.160 1.00 31.56 C
ATOM 215 O2 DC B 11 14.491 6.100 -12.332 1.00 31.01 O
ATOM 216 N3 DC B 11 16.561 6.892 -12.160 1.00 33.02 N
ATOM 217 C4 DC B 11 17.260 8.009 -11.919 1.00 31.81 C
ATOM 218 N4 DC B 11 18.578 7.870 -11.919 1.00 34.33 N
ATOM 219 C5 DC B 11 16.669 9.313 -11.679 1.00 31.30 C
ATOM 220 C6 DC B 11 15.351 9.360 -11.748 1.00 33.75 C
ATOM 221 P DC B 12 9.222 7.777 -10.545 1.00 45.98 P
ATOM 222 OP1 DC B 12 8.334 7.357 -11.679 1.00 46.66 O
ATOM 223 OP2 DC B 12 9.410 9.034 -9.755 1.00 44.84 O
ATOM 224 O5' DC B 12 9.625 6.519 -9.584 1.00 43.87 O
ATOM 225 C5' DC B 12 9.974 5.355 -10.271 1.00 40.85 C
ATOM 226 C4' DC B 12 10.593 4.377 -9.309 1.00 39.22 C
ATOM 227 O4' DC B 12 12.044 4.657 -9.412 1.00 37.64 O
ATOM 228 C3' DC B 12 10.189 4.517 -7.866 1.00 39.66 C
ATOM 229 O3' DC B 12 10.243 3.213 -7.454 1.00 42.21 O
ATOM 230 C2' DC B 12 11.399 5.215 -7.282 1.00 38.09 C
ATOM 231 C1' DC B 12 12.528 4.657 -8.141 1.00 36.69 C
ATOM 232 N1 DC B 12 13.765 5.495 -8.278 1.00 29.89 N
ATOM 233 C2 DC B 12 14.975 4.796 -8.519 1.00 25.72 C
ATOM 234 O2 DC B 12 14.867 3.586 -8.622 1.00 33.23 O
ATOM 235 N3 DC B 12 16.131 5.495 -8.587 1.00 19.72 N
ATOM 236 C4 DC B 12 16.077 6.799 -8.416 1.00 16.51 C
ATOM 237 N4 DC B 12 17.260 7.451 -8.553 1.00 25.43 N
ATOM 238 C5 DC B 12 14.975 7.497 -8.210 1.00 17.90 C
ATOM 239 C6 DC B 12 13.792 6.845 -8.141 1.00 23.84 C
ATOM 240 P DA B 13 9.060 2.375 -6.939 1.00 43.14 P
ATOM 241 OP1 DA B 13 8.307 2.095 -8.210 1.00 46.97 O
ATOM 242 OP2 DA B 13 8.388 2.980 -5.771 1.00 43.91 O
ATOM 243 O5' DA B 13 9.759 1.071 -6.389 1.00 39.52 O
ATOM 244 C5' DA B 13 10.351 0.233 -7.351 1.00 35.43 C
ATOM 245 C4' DA B 13 11.426 -0.605 -6.767 1.00 32.41 C
ATOM 246 O4' DA B 13 12.609 0.233 -6.526 1.00 30.53 O
ATOM 247 C3' DA B 13 11.184 -1.304 -5.462 1.00 29.57 C
ATOM 248 O3' DA B 13 12.071 -2.468 -5.427 1.00 32.14 O
ATOM 249 C2' DA B 13 11.722 -0.279 -4.500 1.00 24.94 C
ATOM 250 C1' DA B 13 12.985 0.233 -5.153 1.00 24.39 C
ATOM 251 N9 DA B 13 13.308 1.630 -5.049 1.00 10.27 N
ATOM 252 C8 DA B 13 12.340 2.561 -4.775 1.00 10.76 C
ATOM 253 N7 DA B 13 12.932 3.772 -4.603 1.00 13.81 N
ATOM 254 C5 DA B 13 14.222 3.679 -4.946 1.00 13.72 C
ATOM 255 C6 DA B 13 15.271 4.563 -5.015 1.00 17.19 C
ATOM 256 N6 DA B 13 15.082 5.914 -4.843 1.00 18.06 N
ATOM 257 N1 DA B 13 16.534 4.144 -5.393 1.00 18.11 N
ATOM 258 C2 DA B 13 16.669 2.794 -5.496 1.00 16.84 C
ATOM 259 N3 DA B 13 15.728 1.816 -5.427 1.00 11.33 N
ATOM 260 C4 DA B 13 14.518 2.328 -5.187 1.00 14.35 C
ATOM 261 P DG B 14 11.749 -3.679 -4.362 1.00 30.93 P
ATOM 262 OP1 DG B 14 11.964 -4.703 -5.462 1.00 29.85 O
ATOM 263 OP2 DG B 14 10.566 -3.306 -3.538 1.00 30.49 O
ATOM 264 O5' DG B 14 12.932 -3.399 -3.229 1.00 26.71 O
ATOM 265 C5' DG B 14 14.249 -3.539 -3.710 1.00 24.60 C
ATOM 266 C4' DG B 14 15.190 -3.027 -2.645 1.00 21.78 C
ATOM 267 O4' DG B 14 15.029 -1.630 -2.714 1.00 17.75 O
ATOM 268 C3' DG B 14 14.760 -3.399 -1.134 1.00 21.17 C
ATOM 269 O3' DG B 14 15.916 -3.632 -0.343 1.00 17.05 O
ATOM 270 C2' DG B 14 14.222 -2.002 -0.790 1.00 16.49 C
ATOM 271 C1' DG B 14 15.271 -1.118 -1.477 1.00 17.37 C
ATOM 272 N9 DG B 14 14.841 0.279 -1.580 1.00 14.84 N
ATOM 273 C8 DG B 14 13.550 0.652 -1.237 1.00 15.37 C
ATOM 274 N7 DG B 14 13.416 1.909 -1.340 1.00 17.08 N
ATOM 275 C5 DG B 14 14.652 2.375 -1.546 1.00 13.25 C
ATOM 276 C6 DG B 14 15.136 3.679 -1.580 1.00 15.33 C
ATOM 277 O6 DG B 14 14.518 4.750 -1.477 1.00 14.62 O
ATOM 278 N1 DG B 14 16.507 3.632 -1.821 1.00 13.47 N
ATOM 279 C2 DG B 14 17.314 2.515 -1.992 1.00 9.35 C
ATOM 280 N2 DG B 14 18.524 2.747 -2.267 1.00 13.95 N
ATOM 281 N3 DG B 14 16.857 1.350 -1.855 1.00 14.29 N
ATOM 282 C4 DG B 14 15.566 1.350 -1.717 1.00 14.94 C
ATOM 283 P DG B 15 16.373 -4.983 0.343 1.00 15.87 P
ATOM 284 OP1 DG B 15 16.857 -6.193 -0.447 1.00 18.04 O
ATOM 285 OP2 DG B 15 15.324 -5.215 1.305 1.00 16.80 O
ATOM 286 O5' DG B 15 17.637 -4.191 0.824 1.00 13.40 O
ATOM 287 C5' DG B 15 18.793 -4.051 -0.034 1.00 7.43 C
ATOM 288 C4' DG B 15 19.599 -2.934 0.584 1.00 8.17 C
ATOM 289 O4' DG B 15 18.766 -1.676 0.481 1.00 14.55 O
ATOM 290 C3' DG B 15 19.922 -2.841 2.095 1.00 15.04 C
ATOM 291 O3' DG B 15 21.239 -2.235 2.027 1.00 15.83 O
ATOM 292 C2' DG B 15 19.169 -1.723 2.782 1.00 16.58 C
ATOM 293 C1' DG B 15 18.793 -0.792 1.614 1.00 16.52 C
ATOM 294 N9 DG B 15 17.556 0.047 1.614 1.00 17.32 N
ATOM 295 C8 DG B 15 16.239 -0.186 1.855 1.00 23.44 C
ATOM 296 N7 DG B 15 15.459 0.885 1.924 1.00 25.36 N
ATOM 297 C5 DG B 15 16.346 1.956 1.752 1.00 19.89 C
ATOM 298 C6 DG B 15 16.077 3.353 1.683 1.00 14.25 C
ATOM 299 O6 DG B 15 15.136 4.051 1.649 1.00 19.96 O
ATOM 300 N1 DG B 15 17.233 4.051 1.511 1.00 10.78 N
ATOM 301 C2 DG B 15 18.497 3.446 1.340 1.00 16.14 C
ATOM 302 N2 DG B 15 19.465 4.284 1.099 1.00 18.34 N
ATOM 303 N3 DG B 15 18.712 2.142 1.271 1.00 18.35 N
ATOM 304 C4 DG B 15 17.610 1.444 1.511 1.00 18.08 C
ATOM 305 P DC B 16 21.992 -2.235 3.366 1.00 21.34 P
ATOM 306 OP1 DC B 16 23.363 -2.747 3.092 1.00 24.14 O
ATOM 307 OP2 DC B 16 21.158 -2.841 4.397 1.00 18.94 O
ATOM 308 O5' DC B 16 22.073 -0.698 3.675 1.00 24.72 O
ATOM 309 C5' DC B 16 22.798 0.093 2.782 1.00 24.65 C
ATOM 310 C4' DC B 16 22.852 1.490 3.332 1.00 23.07 C
ATOM 311 O4' DC B 16 21.616 2.328 3.195 1.00 19.17 O
ATOM 312 C3' DC B 16 23.336 1.583 4.775 1.00 22.88 C
ATOM 313 O3' DC B 16 24.170 2.654 4.775 1.00 22.36 O
ATOM 314 C2' DC B 16 21.965 1.909 5.427 1.00 22.75 C
ATOM 315 C1' DC B 16 21.320 2.841 4.431 1.00 21.06 C
ATOM 316 N1 DC B 16 19.895 2.701 4.637 1.00 21.31 N
ATOM 317 C2 DC B 16 19.223 3.865 4.878 1.00 21.64 C
ATOM 318 O2 DC B 16 19.868 4.889 4.912 1.00 19.16 O
ATOM 319 N3 DC B 16 17.905 3.912 4.946 1.00 19.43 N
ATOM 320 C4 DC B 16 17.287 2.747 4.912 1.00 15.62 C
ATOM 321 N4 DC B 16 15.970 2.887 5.049 1.00 12.81 N
ATOM 322 C5 DC B 16 17.905 1.490 4.706 1.00 19.01 C
ATOM 323 C6 DC B 16 19.250 1.490 4.569 1.00 20.13 C
HETATM 324 N1 5CM B 17 20.540 5.495 8.416 1.00 22.98 N
HETATM 325 C2 5CM B 17 19.330 6.007 8.553 1.00 19.83 C
HETATM 326 N3 5CM B 17 18.174 5.215 8.519 1.00 16.40 N
HETATM 327 C4 5CM B 17 18.336 3.912 8.381 1.00 18.16 C
HETATM 328 C5 5CM B 17 19.653 3.306 8.347 1.00 15.68 C
HETATM 329 C5A 5CM B 17 19.841 1.863 8.210 1.00 12.99 C
HETATM 330 C6 5CM B 17 20.701 4.098 8.278 1.00 21.24 C
HETATM 331 O2 5CM B 17 19.250 7.264 8.622 1.00 25.35 O
HETATM 332 N4 5CM B 17 17.180 3.213 8.416 1.00 21.06 N
HETATM 333 C1' 5CM B 17 21.723 6.333 8.072 1.00 22.27 C
HETATM 334 C2' 5CM B 17 22.960 6.333 9.000 1.00 22.27 C
HETATM 335 C3' 5CM B 17 24.008 6.752 7.935 1.00 25.93 C
HETATM 336 C4' 5CM B 17 23.497 6.519 6.526 1.00 23.86 C
HETATM 337 O4' 5CM B 17 22.207 5.960 6.801 1.00 23.76 O
HETATM 338 O3' 5CM B 17 24.600 8.149 8.038 1.00 31.78 O
HETATM 339 C5' 5CM B 17 24.385 5.541 5.736 1.00 22.35 C
HETATM 340 O5' 5CM B 17 24.627 4.377 6.526 1.00 20.73 O
HETATM 341 P 5CM B 17 25.218 2.980 5.977 1.00 22.29 P
HETATM 342 OP1 5CM B 17 26.509 3.446 5.462 1.00 22.15 O
HETATM 343 OP2 5CM B 17 25.164 2.049 7.042 1.00 24.01 O
ATOM 344 P DT B 18 25.353 8.615 9.378 1.00 34.91 P
ATOM 345 OP1 DT B 18 26.025 9.872 8.897 1.00 34.99 O
ATOM 346 OP2 DT B 18 26.078 7.451 10.030 1.00 32.98 O
ATOM 347 O5' DT B 18 24.250 8.941 10.511 1.00 35.47 O
ATOM 348 C5' DT B 18 23.471 10.105 10.202 1.00 37.19 C
ATOM 349 C4' DT B 18 22.422 10.338 11.232 1.00 38.56 C
ATOM 350 O4' DT B 18 21.293 9.406 11.198 1.00 38.11 O
ATOM 351 C3' DT B 18 23.040 10.198 12.606 1.00 38.90 C
ATOM 352 O3' DT B 18 22.476 11.176 13.396 1.00 41.40 O
ATOM 353 C2' DT B 18 22.583 8.754 12.984 1.00 38.06 C
ATOM 354 C1' DT B 18 21.105 8.801 12.435 1.00 36.33 C
ATOM 355 N1 DT B 18 20.513 7.497 12.229 1.00 29.76 N
ATOM 356 C2 DT B 18 19.142 7.451 12.022 1.00 26.24 C
ATOM 357 O2 DT B 18 18.416 8.428 11.954 1.00 21.36 O
ATOM 358 N3 DT B 18 18.497 6.240 11.919 1.00 23.40 N
ATOM 359 C4 DT B 18 19.250 5.122 11.954 1.00 20.83 C
ATOM 360 O4 DT B 18 18.658 4.098 11.748 1.00 21.85 O
ATOM 361 C5 DT B 18 20.701 5.215 12.091 1.00 24.52 C
ATOM 362 C7 DT B 18 21.481 3.958 12.091 1.00 27.61 C
ATOM 363 C6 DT B 18 21.266 6.380 12.229 1.00 23.85 C
ATOM 364 P DG B 19 23.014 12.573 13.809 1.00 40.68 P
ATOM 365 OP1 DG B 19 23.094 13.364 12.538 1.00 40.58 O
ATOM 366 OP2 DG B 19 24.116 12.433 14.736 1.00 42.61 O
ATOM 367 O5' DG B 19 21.696 13.085 14.633 1.00 36.70 O
ATOM 368 C5' DG B 19 20.648 13.690 13.912 1.00 39.04 C
ATOM 369 C4' DG B 19 19.384 13.551 14.736 1.00 44.54 C
ATOM 370 O4' DG B 19 19.088 12.107 14.839 1.00 44.89 O
ATOM 371 C3' DG B 19 19.707 13.923 16.179 1.00 49.80 C
ATOM 372 O3' DG B 19 18.470 14.296 16.831 1.00 57.68 O
ATOM 373 C2' DG B 19 20.137 12.619 16.797 1.00 46.88 C
ATOM 374 C1' DG B 19 19.035 11.735 16.213 1.00 44.83 C
ATOM 375 N9 DG B 19 19.492 10.384 16.282 1.00 42.30 N
ATOM 376 C8 DG B 19 20.755 9.965 16.351 1.00 44.30 C
ATOM 377 N7 DG B 19 20.890 8.708 16.110 1.00 43.99 N
ATOM 378 C5 DG B 19 19.626 8.289 15.870 1.00 39.76 C
ATOM 379 C6 DG B 19 19.169 7.031 15.526 1.00 36.15 C
ATOM 380 O6 DG B 19 19.814 6.007 15.389 1.00 35.06 O
ATOM 381 N1 DG B 19 17.771 7.031 15.354 1.00 33.57 N
ATOM 382 C2 DG B 19 16.964 8.149 15.526 1.00 31.55 C
ATOM 383 N2 DG B 19 15.701 8.009 15.320 1.00 31.76 N
ATOM 384 N3 DG B 19 17.475 9.313 15.767 1.00 36.98 N
ATOM 385 C4 DG B 19 18.766 9.313 15.973 1.00 40.04 C
ATOM 386 P DG B 20 18.067 15.739 17.518 1.00 59.44 P
ATOM 387 OP1 DG B 20 17.610 16.531 16.385 1.00 61.57 O
ATOM 388 OP2 DG B 20 19.223 16.252 18.343 1.00 61.38 O
ATOM 389 O5' DG B 20 16.964 15.041 18.412 1.00 55.23 O
ATOM 390 C5' DG B 20 16.050 14.296 17.587 1.00 53.11 C
ATOM 391 C4' DG B 20 15.378 13.225 18.412 1.00 50.63 C
ATOM 392 O4' DG B 20 16.050 11.968 18.274 1.00 48.04 O
ATOM 393 C3' DG B 20 15.486 13.597 19.854 1.00 49.51 C
ATOM 394 O3' DG B 20 14.168 13.364 20.438 1.00 50.33 O
ATOM 395 C2' DG B 20 16.696 12.713 20.370 1.00 46.65 C
ATOM 396 C1' DG B 20 16.265 11.502 19.579 1.00 44.58 C
ATOM 397 N9 DG B 20 17.314 10.524 19.476 1.00 33.62 N
ATOM 398 C8 DG B 20 18.551 10.896 19.717 1.00 30.27 C
ATOM 399 N7 DG B 20 19.438 9.919 19.648 1.00 28.29 N
ATOM 400 C5 DG B 20 18.712 8.848 19.339 1.00 28.74 C
ATOM 401 C6 DG B 20 19.115 7.497 19.133 1.00 30.68 C
ATOM 402 O6 DG B 20 20.218 7.078 19.236 1.00 32.30 O
ATOM 403 N1 DG B 20 17.959 6.706 18.858 1.00 27.89 N
ATOM 404 C2 DG B 20 16.696 7.218 18.721 1.00 23.31 C
ATOM 405 N2 DG B 20 15.755 6.333 18.480 1.00 25.21 N
ATOM 406 N3 DG B 20 16.319 8.428 18.927 1.00 29.83 N
ATOM 407 C4 DG B 20 17.368 9.220 19.202 1.00 30.79 C
TER 408 DG B 20
HETATM 409 O HOH A 26 21.669 6.612 2.439 1.00 21.83 O
HETATM 410 O HOH A 27 14.142 -1.397 13.809 1.00 22.38 O
HETATM 411 O HOH A 29 7.366 6.706 8.175 1.00 28.91 O
HETATM 412 O HOH A 31 10.915 7.357 3.882 1.00 31.82 O
HETATM 413 O HOH A 32 13.496 8.848 -1.821 1.00 32.27 O
HETATM 414 O HOH A 33 18.013 16.391 6.080 1.00 33.90 O
HETATM 415 O HOH A 36 16.561 9.965 -5.256 1.00 36.25 O
HETATM 416 O HOH A 38 21.400 1.304 -5.462 1.00 37.65 O
HETATM 417 O HOH A 41 17.986 10.757 6.630 1.00 40.54 O
HETATM 418 O HOH A 42 11.614 15.087 9.584 1.00 36.87 O
HETATM 419 O HOH A 44 20.540 9.872 6.080 1.00 42.72 O
HETATM 420 O HOH A 48 11.883 9.965 13.671 1.00 49.71 O
HETATM 421 O HOH A 49 15.190 11.409 9.618 1.00 53.11 O
HETATM 422 O HOH A 55 9.947 10.990 3.092 1.00 32.74 O
HETATM 423 O HOH A 57 26.885 0.000 -11.851 0.50 65.62 O
HETATM 424 O HOH B 21 20.164 -1.211 6.458 1.00 16.61 O
HETATM 425 O HOH B 22 13.147 0.698 2.233 1.00 17.87 O
HETATM 426 O HOH B 23 12.932 -6.380 0.859 1.00 18.19 O
HETATM 427 O HOH B 24 22.610 -4.703 6.286 1.00 17.96 O
HETATM 428 O HOH B 25 16.561 0.279 8.107 1.00 21.34 O
HETATM 429 O HOH B 28 14.679 0.279 5.393 1.00 26.79 O
HETATM 430 O HOH B 30 9.248 -5.960 -2.095 1.00 30.44 O
HETATM 431 O HOH B 34 10.082 -6.659 0.034 1.00 34.58 O
HETATM 432 O HOH B 35 19.061 -7.497 -0.103 1.00 36.91 O
HETATM 433 O HOH B 37 28.471 4.796 6.904 1.00 39.49 O
HETATM 434 O HOH B 39 18.739 1.723 7.660 1.00 37.04 O
HETATM 435 O HOH B 40 18.604 -0.838 -2.988 1.00 34.55 O
HETATM 436 O HOH B 43 27.826 7.963 6.286 1.00 40.96 O
HETATM 437 O HOH B 45 24.492 5.914 14.290 1.00 46.00 O
HETATM 438 O HOH B 46 12.985 7.963 -4.603 1.00 49.78 O
HETATM 439 O HOH B 47 19.142 1.583 11.404 1.00 52.36 O
HETATM 440 O HOH B 50 24.223 -5.169 3.882 1.00 53.98 O
HETATM 441 O HOH B 51 13.416 10.384 -5.668 1.00 57.07 O
HETATM 442 O HOH B 52 15.620 0.326 11.026 1.00 56.74 O
HETATM 443 O HOH B 53 21.642 16.065 11.095 1.00 63.73 O
HETATM 444 O HOH B 54 28.417 1.909 4.672 1.00 56.00 O
HETATM 445 O HOH B 56 26.885 0.000 15.148 0.50 48.18 O
CONECT 109 137
CONECT 120 121 126 129
CONECT 121 120 122 127
CONECT 122 121 123
CONECT 123 122 124 128
CONECT 124 123 125 126
CONECT 125 124
CONECT 126 120 124
CONECT 127 121
CONECT 128 123
CONECT 129 120 130 133
CONECT 130 129 131
CONECT 131 130 132 134
CONECT 132 131 133 135
CONECT 133 129 132
CONECT 134 131 140
CONECT 135 132 136
CONECT 136 135 137
CONECT 137 109 136 138 139
CONECT 138 137
CONECT 139 137
CONECT 140 134
CONECT 313 341
CONECT 324 325 330 333
CONECT 325 324 326 331
CONECT 326 325 327
CONECT 327 326 328 332
CONECT 328 327 329 330
CONECT 329 328
CONECT 330 324 328
CONECT 331 325
CONECT 332 327
CONECT 333 324 334 337
CONECT 334 333 335
CONECT 335 334 336 338
CONECT 336 335 337 339
CONECT 337 333 336
CONECT 338 335 344
CONECT 339 336 340
CONECT 340 339 341
CONECT 341 313 340 342 343
CONECT 342 341
CONECT 343 341
CONECT 344 338
MASTER 373 0 2 0 0 0 0 6 443 2 44 2
END